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Skipping 85 KB..
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- src/omero_zarr/raw_pixels.py
- .isort.cfg
--conflicts
2024-06-24 00:42:51,151 [ scc.config] DEBUG Found github.token
2024-06-24 00:42:51,151 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts.
2024-06-24 00:42:51,151 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef'
2024-06-24 00:42:51,157 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:42:51,162 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef'
2024-06-24 00:42:51,174 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py
2024-06-24 00:42:51,174 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py
2024-06-24 00:42:51,175 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-24 00:42:51,178 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------
2024-06-24 00:42:51,178 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++
2024-06-24 00:42:51,178 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++--
2024-06-24 00:42:51,178 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++-----
2024-06-24 00:42:51,178 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +-
2024-06-24 00:42:51,178 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-)
2024-06-24 00:42:51,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:42:51,535 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-24 00:42:51,576 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:42:51,577 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:42:51,584 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-24 00:42:51,620 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-24 00:42:51,626 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5e3c400b50> has no local changes
2024-06-24 00:42:51,626 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft)
Already up to date.
Merged PRs:
- PR 147 will-moore 'Name option'
Conflicting PRs (not included):
- PR 102 will-moore 'Zarr export tests'
- PR 123 will-moore 'Support export of Fileset:ID'
Generated by OMERO-plugins-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/)'
2024-06-24 00:42:51,634 [ scc.git] DEBUG [detached HEAD 1c92bf1] merge master -Dorg -Ssuccess-only
2024-06-24 00:42:51,635 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:42:51,635 [ scc.repo] DEBUG ## PRs found:
2024-06-24 00:42:52,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None
2024-06-24 00:42:52,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None
2024-06-24 00:42:52,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None
2024-06-24 00:42:53,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None
2024-06-24 00:42:53,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-24 00:42:54,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-24 00:42:54,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None
2024-06-24 00:42:55,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2
2024-06-24 00:42:55,329 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py'
2024-06-24 00:42:55,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None
2024-06-24 00:42:56,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None
2024-06-24 00:42:56,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None
2024-06-24 00:42:57,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-24 00:42:57,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-24 00:42:58,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None
2024-06-24 00:42:58,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2
2024-06-24 00:42:58,734 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor'
2024-06-24 00:42:59,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None
2024-06-24 00:42:59,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None
2024-06-24 00:43:00,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-24 00:43:00,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-24 00:43:01,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None
2024-06-24 00:43:01,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24?per_page=1 HTTP/1.1" 200 2
2024-06-24 00:43:01,653 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature'
2024-06-24 00:43:01,653 [ scc.repo] DEBUG ## Branches found:
2024-06-24 00:43:01,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2024-06-24 00:43:01,653 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:43:01,654 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:01,660 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-24 00:43:01,665 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-24 00:43:01,665 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-24 00:43:01,671 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-24 00:43:01,677 [ scc.git] DEBUG Already up to date.
2024-06-24 00:43:01,677 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head'
2024-06-24 00:43:02,047 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2024-06-24 00:43:02,047 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD
2024-06-24 00:43:02,052 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head'
2024-06-24 00:43:02,543 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2024-06-24 00:43:02,543 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD
2024-06-24 00:43:02,548 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head'
2024-06-24 00:43:02,937 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2024-06-24 00:43:02,937 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD
2024-06-24 00:43:02,943 [ scc.git] DEBUG ## Unique users: []
2024-06-24 00:43:02,943 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:43:02,943 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:02,948 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24'
2024-06-24 00:43:02,957 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:02,963 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) 6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24'
2024-06-24 00:43:03,049 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-24 00:43:03,055 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++-
2024-06-24 00:43:03,055 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++++
2024-06-24 00:43:03,055 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++
2024-06-24 00:43:03,055 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 +++++++++++++-
2024-06-24 00:43:03,055 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 +
2024-06-24 00:43:03,055 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++-
2024-06-24 00:43:03,055 [ scc.git] DEBUG src/js/views/right_panel_view.js | 74 +++++++++++++++++++++++++++++-
2024-06-24 00:43:03,055 [ scc.git] DEBUG src/js/views/util.js | 54 ++++++++++++++++++++++
2024-06-24 00:43:03,055 [ scc.git] DEBUG src/templates/rois_form.template.html | 7 +++
2024-06-24 00:43:03,055 [ scc.git] DEBUG 9 files changed, 270 insertions(+), 5 deletions(-)
2024-06-24 00:43:03,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:43:03,224 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab'
2024-06-24 00:43:03,232 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:03,238 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab'
2024-06-24 00:43:03,275 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js
2024-06-24 00:43:03,275 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js
2024-06-24 00:43:03,275 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js
2024-06-24 00:43:03,276 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-24 00:43:03,284 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +-
2024-06-24 00:43:03,284 [ scc.git] DEBUG src/css/figure.css | 4 +
2024-06-24 00:43:03,284 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes
2024-06-24 00:43:03,284 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +-
2024-06-24 00:43:03,284 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 +
2024-06-24 00:43:03,284 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++-
2024-06-24 00:43:03,284 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +-
2024-06-24 00:43:03,284 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 +
2024-06-24 00:43:03,284 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +-
2024-06-24 00:43:03,284 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 +
2024-06-24 00:43:03,284 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-)
2024-06-24 00:43:03,284 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png
2024-06-24 00:43:03,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:43:03,639 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6'
2024-06-24 00:43:03,648 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:03,654 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6'
2024-06-24 00:43:03,671 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-24 00:43:03,673 [ scc.git] DEBUG setup.py | 2 +-
2024-06-24 00:43:03,674 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-06-24 00:43:04,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:43:04,051 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-24 00:43:04,093 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:43:04,093 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:04,099 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-24 00:43:04,141 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-24 00:43:04,150 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5e3c43d2b0> has no local changes
2024-06-24 00:43:04,151 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-figure
Excluded PRs:
- PR 560 will-moore 'Max projection bytes' (exclude comment)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Already up to date.
Merged PRs:
- PR 549 will-moore 'Inset feature'
- PR 555 will-moore 'Points in shape editor'
- PR 568 will-moore 'Remove numpy from tests_require in setup.py'
Generated by OMERO-plugins-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/)'
2024-06-24 00:43:04,161 [ scc.git] DEBUG [detached HEAD 1d66b801] merge master -Dorg -Ssuccess-only
2024-06-24 00:43:04,162 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:43:04,162 [ scc.repo] DEBUG ## PRs found:
2024-06-24 00:43:04,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None
2024-06-24 00:43:05,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None
2024-06-24 00:43:05,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None
2024-06-24 00:43:06,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2024-06-24 00:43:06,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-24 00:43:06,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2024-06-24 00:43:07,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2
2024-06-24 00:43:07,420 [ scc.repo] DEBUG - PR 18 jburel 'default size z value'
2024-06-24 00:43:07,421 [ scc.repo] DEBUG ## Branches found:
2024-06-24 00:43:07,421 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2024-06-24 00:43:07,421 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:43:07,421 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:07,427 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-24 00:43:07,431 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-24 00:43:07,432 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-24 00:43:07,437 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-24 00:43:07,442 [ scc.git] DEBUG Already up to date.
2024-06-24 00:43:07,443 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head'
2024-06-24 00:43:07,844 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2024-06-24 00:43:07,845 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD
2024-06-24 00:43:07,849 [ scc.git] DEBUG ## Unique users: []
2024-06-24 00:43:07,850 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:43:07,850 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:07,855 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337'
2024-06-24 00:43:07,860 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:07,865 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337'
2024-06-24 00:43:07,873 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py
2024-06-24 00:43:07,874 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-24 00:43:07,877 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++
2024-06-24 00:43:07,877 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-06-24 00:43:08,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:43:08,035 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-24 00:43:08,081 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:43:08,081 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:08,086 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-24 00:43:08,123 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-24 00:43:08,130 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5e3c43de20> has no local changes
2024-06-24 00:43:08,130 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
Generated by OMERO-plugins-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/)'
2024-06-24 00:43:08,138 [ scc.git] DEBUG [detached HEAD 8a813a8] merge master -Dorg -Ssuccess-only
2024-06-24 00:43:08,139 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:43:08,139 [ scc.repo] DEBUG ## PRs found:
2024-06-24 00:43:08,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None
2024-06-24 00:43:08,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None
2024-06-24 00:43:08,989 [ scc.repo] DEBUG # ... Include label: dependencies
2024-06-24 00:43:09,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None
2024-06-24 00:43:10,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-24 00:43:10,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-24 00:43:11,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None
2024-06-24 00:43:11,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2
2024-06-24 00:43:11,523 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'
2024-06-24 00:43:11,523 [ scc.repo] DEBUG ## Branches found:
2024-06-24 00:43:11,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-06-24 00:43:11,523 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:43:11,523 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:11,542 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-24 00:43:11,548 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-24 00:43:11,548 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-24 00:43:11,554 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-24 00:43:11,560 [ scc.git] DEBUG Already up to date.
2024-06-24 00:43:11,560 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head'
2024-06-24 00:43:11,976 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-06-24 00:43:11,976 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD
2024-06-24 00:43:11,980 [ scc.git] DEBUG ## Unique users: []
2024-06-24 00:43:11,981 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:43:11,981 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:11,986 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893'
2024-06-24 00:43:11,992 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:11,999 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893'
2024-06-24 00:43:12,012 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-24 00:43:12,016 [ scc.git] DEBUG package-lock.json | 18 ++++++------------
2024-06-24 00:43:12,016 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-)
2024-06-24 00:43:12,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:43:12,178 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-24 00:43:12,221 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:43:12,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:12,227 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-24 00:43:12,269 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-24 00:43:12,277 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5e3c43d310> has no local changes
2024-06-24 00:43:12,277 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'
Generated by OMERO-plugins-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/)'
2024-06-24 00:43:12,288 [ scc.git] DEBUG [detached HEAD 206ec4b] merge master -Dorg -Ssuccess-only
2024-06-24 00:43:12,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:43:12,289 [ scc.repo] DEBUG ## PRs found:
2024-06-24 00:43:12,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None
2024-06-24 00:43:13,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None
2024-06-24 00:43:13,202 [ scc.repo] DEBUG # ... Include label: dependencies
2024-06-24 00:43:13,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None
2024-06-24 00:43:14,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-24 00:43:14,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-24 00:43:15,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None
2024-06-24 00:43:15,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2
2024-06-24 00:43:15,821 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5'
2024-06-24 00:43:16,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None
2024-06-24 00:43:16,284 [ scc.repo] DEBUG # ... Include label: dependencies
2024-06-24 00:43:16,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None
2024-06-24 00:43:17,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-24 00:43:17,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-24 00:43:18,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None
2024-06-24 00:43:18,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2
2024-06-24 00:43:18,830 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io'
2024-06-24 00:43:19,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None
2024-06-24 00:43:19,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None
2024-06-24 00:43:20,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-06-24 00:43:20,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-24 00:43:21,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-24 00:43:21,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-06-24 00:43:22,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2
2024-06-24 00:43:22,056 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip'
2024-06-24 00:43:22,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None
2024-06-24 00:43:23,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None
2024-06-24 00:43:23,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-06-24 00:43:24,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-24 00:43:24,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-24 00:43:25,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-06-24 00:43:25,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2
2024-06-24 00:43:25,535 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure'
2024-06-24 00:43:25,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None
2024-06-24 00:43:26,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None
2024-06-24 00:43:26,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-06-24 00:43:27,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-24 00:43:27,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-06-24 00:43:28,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2
2024-06-24 00:43:28,278 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix'
2024-06-24 00:43:28,279 [ scc.repo] DEBUG ## Branches found:
2024-06-24 00:43:28,279 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-06-24 00:43:28,279 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:43:28,279 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:28,285 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-24 00:43:28,290 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-24 00:43:28,290 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-24 00:43:28,295 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-24 00:43:28,301 [ scc.git] DEBUG Already up to date.
2024-06-24 00:43:28,301 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head'
2024-06-24 00:43:28,690 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-06-24 00:43:28,691 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD
2024-06-24 00:43:28,695 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head'
2024-06-24 00:43:29,426 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-06-24 00:43:29,426 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD
2024-06-24 00:43:29,430 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head'
2024-06-24 00:43:29,830 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-06-24 00:43:29,830 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD
2024-06-24 00:43:29,835 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head'
2024-06-24 00:43:30,197 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-06-24 00:43:30,198 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD
2024-06-24 00:43:30,202 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head'
2024-06-24 00:43:30,558 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-06-24 00:43:30,558 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD
2024-06-24 00:43:30,562 [ scc.git] DEBUG ## Unique users: []
2024-06-24 00:43:30,562 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:43:30,562 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:30,568 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-06-24 00:43:30,576 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:30,581 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-06-24 00:43:30,629 [ scc.git] DEBUG Auto-merging src/model/image_info.js
2024-06-24 00:43:30,630 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-24 00:43:30,633 [ scc.git] DEBUG src/model/image_info.js | 7 ++++---
2024-06-24 00:43:30,633 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++-
2024-06-24 00:43:30,633 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-)
2024-06-24 00:43:30,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:43:30,797 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd'
2024-06-24 00:43:30,804 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:30,810 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd'
2024-06-24 00:43:30,829 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py
2024-06-24 00:43:30,829 [ scc.git] DEBUG Auto-merging src/app/context.js
2024-06-24 00:43:30,829 [ scc.git] DEBUG Auto-merging src/utils/constants.js
2024-06-24 00:43:30,829 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js
2024-06-24 00:43:30,830 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-24 00:43:30,834 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++-
2024-06-24 00:43:30,834 [ scc.git] DEBUG src/app/context.js | 6 +-
2024-06-24 00:43:30,834 [ scc.git] DEBUG src/app/header.html | 5 +
2024-06-24 00:43:30,834 [ scc.git] DEBUG src/app/header.js | 45 ++++++++-
2024-06-24 00:43:30,834 [ scc.git] DEBUG src/utils/constants.js | 6 ++
2024-06-24 00:43:30,834 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++
2024-06-24 00:43:30,834 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-)
2024-06-24 00:43:30,834 [ scc.git] DEBUG create mode 100644 src/utils/figure.js
2024-06-24 00:43:31,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:43:31,216 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9'
2024-06-24 00:43:31,224 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:31,229 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9'
2024-06-24 00:43:31,242 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js
2024-06-24 00:43:31,243 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-24 00:43:31,245 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +-
2024-06-24 00:43:31,245 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++
2024-06-24 00:43:31,245 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-)
2024-06-24 00:43:31,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:43:31,626 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5'
2024-06-24 00:43:31,647 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:31,653 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5'
2024-06-24 00:43:31,688 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-24 00:43:31,697 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++--------------------
2024-06-24 00:43:31,698 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-)
2024-06-24 00:43:32,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:43:32,086 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11'
2024-06-24 00:43:32,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:32,099 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11'
2024-06-24 00:43:32,162 [ scc.git] DEBUG Auto-merging package-lock.json
2024-06-24 00:43:32,165 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-24 00:43:32,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:43:32,498 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-24 00:43:32,539 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:43:32,540 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:32,548 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-24 00:43:32,586 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-24 00:43:32,593 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5e3c41e8e0> has no local changes
2024-06-24 00:43:32,593 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-iviewer
Excluded PRs:
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Already up to date.
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 477 dependabot[bot] 'Bump ws and socket.io'
- PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5'
Generated by OMERO-plugins-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/)'
2024-06-24 00:43:32,602 [ scc.git] DEBUG [detached HEAD 9396439] merge master -Dorg -Ssuccess-only
2024-06-24 00:43:32,603 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:43:32,603 [ scc.repo] DEBUG ## PRs found:
2024-06-24 00:43:33,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2024-06-24 00:43:33,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2024-06-24 00:43:34,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2024-06-24 00:43:34,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-06-24 00:43:35,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-24 00:43:35,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-24 00:43:36,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-06-24 00:43:36,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2024-06-24 00:43:36,896 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2024-06-24 00:43:36,897 [ scc.repo] DEBUG ## Branches found:
2024-06-24 00:43:36,897 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-06-24 00:43:36,897 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:43:36,897 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:36,903 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-24 00:43:36,909 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-24 00:43:36,909 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-24 00:43:36,914 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-24 00:43:36,920 [ scc.git] DEBUG Already up to date.
2024-06-24 00:43:36,921 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2024-06-24 00:43:37,268 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2024-06-24 00:43:37,268 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2024-06-24 00:43:37,273 [ scc.git] DEBUG ## Unique users: []
2024-06-24 00:43:37,273 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:43:37,273 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:37,278 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-06-24 00:43:37,285 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:37,290 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-06-24 00:43:37,300 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-24 00:43:37,303 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2024-06-24 00:43:37,303 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2024-06-24 00:43:37,303 [ scc.git] DEBUG requirements.txt | 2 +-
2024-06-24 00:43:37,303 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2024-06-24 00:43:37,303 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2024-06-24 00:43:37,303 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2024-06-24 00:43:37,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:43:37,460 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-24 00:43:37,498 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:43:37,499 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:37,504 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-24 00:43:37,541 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-24 00:43:37,547 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5e3c3cdbb0> has no local changes
2024-06-24 00:43:37,548 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
Generated by OMERO-plugins-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/)'
2024-06-24 00:43:37,556 [ scc.git] DEBUG [detached HEAD 315e4a8] merge master -Dorg -Ssuccess-only
2024-06-24 00:43:37,556 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:43:37,557 [ scc.repo] DEBUG ## PRs found:
2024-06-24 00:43:37,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2024-06-24 00:43:38,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2024-06-24 00:43:38,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2024-06-24 00:43:39,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-06-24 00:43:39,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-24 00:43:40,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-06-24 00:43:40,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2024-06-24 00:43:40,837 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-06-24 00:43:41,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2024-06-24 00:43:41,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2024-06-24 00:43:42,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-06-24 00:43:42,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-24 00:43:43,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-06-24 00:43:43,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2024-06-24 00:43:43,708 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-06-24 00:43:43,708 [ scc.repo] DEBUG ## Branches found:
2024-06-24 00:43:43,708 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-06-24 00:43:43,709 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:43:43,709 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:43,715 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-24 00:43:43,720 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-24 00:43:43,721 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-24 00:43:43,726 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-24 00:43:43,732 [ scc.git] DEBUG Already up to date.
2024-06-24 00:43:43,732 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2024-06-24 00:43:44,122 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-06-24 00:43:44,122 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2024-06-24 00:43:44,127 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2024-06-24 00:43:44,517 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-06-24 00:43:44,517 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2024-06-24 00:43:44,522 [ scc.git] DEBUG ## Unique users: []
2024-06-24 00:43:44,522 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:43:44,522 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:44,528 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-06-24 00:43:44,535 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:44,541 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-06-24 00:43:44,556 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2024-06-24 00:43:44,556 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2024-06-24 00:43:44,557 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-06-24 00:43:44,557 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-06-24 00:43:44,557 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-06-24 00:43:44,557 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-06-24 00:43:44,563 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-06-24 00:43:44,571 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging
2024-06-24 00:43:44,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:43:44,730 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-06-24 00:43:44,737 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-06-24 00:43:44,743 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#106](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/cli.py
- src/omero_metadata/populate.py
--conflicts
2024-06-24 00:43:44,749 [ scc.config] DEBUG Found github.token
2024-06-24 00:43:44,749 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2024-06-24 00:43:44,749 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2024-06-24 00:43:44,755 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:44,761 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2024-06-24 00:43:44,783 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-06-24 00:43:44,783 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-06-24 00:43:44,783 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2024-06-24 00:43:44,783 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-06-24 00:43:44,785 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-06-24 00:43:44,796 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-06-24 00:43:44,804 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging
2024-06-24 00:43:45,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:43:45,155 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7'
2024-06-24 00:43:45,162 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-06-24 00:43:45,168 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#106](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2024-06-24 00:43:45,174 [ scc.config] DEBUG Found github.token
2024-06-24 00:43:45,174 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2024-06-24 00:43:45,174 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-24 00:43:45,212 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:43:45,212 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:45,218 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-24 00:43:45,257 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-24 00:43:45,265 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5e3c3f2d30> has no local changes
2024-06-24 00:43:45,265 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Already up to date.
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/)'
2024-06-24 00:43:45,273 [ scc.git] DEBUG [detached HEAD b11047a] merge master -Dorg -Ssuccess-only
2024-06-24 00:43:45,274 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:43:45,274 [ scc.repo] DEBUG ## PRs found:
2024-06-24 00:43:45,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2024-06-24 00:43:46,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None
2024-06-24 00:43:46,181 [ scc.repo] DEBUG # ... Include label: dependencies
2024-06-24 00:43:46,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None
2024-06-24 00:43:47,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-24 00:43:47,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-24 00:43:48,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None
2024-06-24 00:43:48,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2
2024-06-24 00:43:48,708 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
2024-06-24 00:43:49,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None
2024-06-24 00:43:49,174 [ scc.repo] DEBUG # ... Include label: dependencies
2024-06-24 00:43:49,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None
2024-06-24 00:43:50,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-24 00:43:50,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-24 00:43:51,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None
2024-06-24 00:43:51,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2
2024-06-24 00:43:51,726 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
2024-06-24 00:43:52,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None
2024-06-24 00:43:52,194 [ scc.repo] DEBUG # ... Include label: dependencies
2024-06-24 00:43:52,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None
2024-06-24 00:43:53,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-24 00:43:53,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-24 00:43:54,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None
2024-06-24 00:43:54,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2
2024-06-24 00:43:54,659 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
2024-06-24 00:43:55,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2024-06-24 00:43:55,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2024-06-24 00:43:56,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2024-06-24 00:43:56,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2024-06-24 00:43:56,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2024-06-24 00:43:57,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2024-06-24 00:43:57,533 [ scc.repo] DEBUG ## Branches found:
2024-06-24 00:43:57,533 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-06-24 00:43:57,534 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:43:57,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:57,541 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-24 00:43:57,546 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-24 00:43:57,546 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-24 00:43:57,552 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-24 00:43:57,557 [ scc.git] DEBUG Already up to date.
2024-06-24 00:43:57,557 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head'
2024-06-24 00:43:57,957 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2024-06-24 00:43:57,958 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD
2024-06-24 00:43:57,963 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head'
2024-06-24 00:43:58,304 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2024-06-24 00:43:58,304 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD
2024-06-24 00:43:58,309 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head'
2024-06-24 00:43:58,646 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2024-06-24 00:43:58,646 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD
2024-06-24 00:43:58,651 [ scc.git] DEBUG ## Unique users: []
2024-06-24 00:43:58,651 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:43:58,651 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:58,657 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680'
2024-06-24 00:43:58,663 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:58,669 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680'
2024-06-24 00:43:58,679 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-24 00:43:58,682 [ scc.git] DEBUG package-lock.json | 12 ++++++++----
2024-06-24 00:43:58,682 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-)
2024-06-24 00:43:58,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:43:58,843 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec'
2024-06-24 00:43:58,849 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:58,854 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec'
2024-06-24 00:43:58,865 [ scc.git] DEBUG Auto-merging package-lock.json
2024-06-24 00:43:58,866 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-24 00:43:58,869 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++---------------------------
2024-06-24 00:43:58,869 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-)
2024-06-24 00:43:59,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:43:59,244 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f'
2024-06-24 00:43:59,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:59,255 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f'
2024-06-24 00:43:59,266 [ scc.git] DEBUG Auto-merging package-lock.json
2024-06-24 00:43:59,266 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-24 00:43:59,270 [ scc.git] DEBUG package-lock.json | 8 ++++----
2024-06-24 00:43:59,270 [ scc.git] DEBUG package.json | 2 +-
2024-06-24 00:43:59,270 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-)
2024-06-24 00:43:59,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:43:59,655 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-24 00:43:59,694 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:43:59,694 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:43:59,711 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-24 00:43:59,753 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-24 00:43:59,761 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5e3c385640> has no local changes
2024-06-24 00:43:59,761 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
- PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
- PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
Generated by OMERO-plugins-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/)'
2024-06-24 00:43:59,770 [ scc.git] DEBUG [detached HEAD 51e50e1] merge master -Dorg -Ssuccess-only
2024-06-24 00:43:59,770 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:43:59,771 [ scc.repo] DEBUG ## PRs found:
2024-06-24 00:44:00,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None
2024-06-24 00:44:00,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None
2024-06-24 00:44:01,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-06-24 00:44:01,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-24 00:44:02,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-06-24 00:44:02,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2
2024-06-24 00:44:02,731 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel'
2024-06-24 00:44:02,731 [ scc.repo] DEBUG ## Branches found:
2024-06-24 00:44:02,731 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-06-24 00:44:02,731 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:02,731 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:02,737 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-24 00:44:02,743 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-24 00:44:02,743 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-24 00:44:02,748 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-24 00:44:02,754 [ scc.git] DEBUG Already up to date.
2024-06-24 00:44:02,754 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-06-24 00:44:03,129 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools
2024-06-24 00:44:03,129 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2024-06-24 00:44:03,135 [ scc.git] DEBUG ## Unique users: []
2024-06-24 00:44:03,135 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:03,135 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:03,140 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-06-24 00:44:03,145 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:03,150 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-06-24 00:44:03,159 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-24 00:44:03,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:03,325 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-24 00:44:03,365 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:03,366 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:03,372 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-24 00:44:03,422 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-24 00:44:03,431 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5e3c41dbe0> has no local changes
2024-06-24 00:44:03,431 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 14 jburel 'use conda-forge channel'
Generated by OMERO-plugins-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/)'
2024-06-24 00:44:03,442 [ scc.git] DEBUG [detached HEAD e82cbb3] merge master -Dorg -Ssuccess-only
2024-06-24 00:44:03,442 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:03,442 [ scc.repo] DEBUG ## PRs found:
2024-06-24 00:44:03,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2024-06-24 00:44:04,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None
2024-06-24 00:44:04,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None
2024-06-24 00:44:05,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None
2024-06-24 00:44:05,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-06-24 00:44:06,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-24 00:44:06,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-06-24 00:44:07,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2
2024-06-24 00:44:07,090 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-06-24 00:44:07,090 [ scc.repo] DEBUG ## Branches found:
2024-06-24 00:44:07,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-06-24 00:44:07,091 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:07,091 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:07,099 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-24 00:44:07,106 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-24 00:44:07,106 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-24 00:44:07,113 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-24 00:44:07,120 [ scc.git] DEBUG Already up to date.
2024-06-24 00:44:07,120 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head'
2024-06-24 00:44:07,526 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2024-06-24 00:44:07,527 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD
2024-06-24 00:44:07,531 [ scc.git] DEBUG ## Unique users: []
2024-06-24 00:44:07,532 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:07,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:07,539 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61'
2024-06-24 00:44:07,548 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:07,555 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61'
2024-06-24 00:44:07,566 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py
2024-06-24 00:44:07,567 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-24 00:44:07,569 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++
2024-06-24 00:44:07,569 [ scc.git] DEBUG 1 file changed, 33 insertions(+)
2024-06-24 00:44:07,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:07,747 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-24 00:44:07,788 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:07,788 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:07,795 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-24 00:44:07,837 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-24 00:44:07,845 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5e3c33e550> has no local changes
2024-06-24 00:44:07,845 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 6 dominikl 'Add method to create masks grouped by label id'
Generated by OMERO-plugins-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/)'
2024-06-24 00:44:07,854 [ scc.git] DEBUG [detached HEAD 1d7d665] merge master -Dorg -Ssuccess-only
2024-06-24 00:44:07,854 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:07,854 [ scc.repo] DEBUG ## PRs found:
2024-06-24 00:44:08,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2024-06-24 00:44:08,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2024-06-24 00:44:09,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2024-06-24 00:44:09,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-06-24 00:44:10,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-24 00:44:10,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-06-24 00:44:11,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2024-06-24 00:44:11,226 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2024-06-24 00:44:11,226 [ scc.repo] DEBUG ## Branches found:
2024-06-24 00:44:11,226 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-06-24 00:44:11,226 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:11,226 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:11,239 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-24 00:44:11,249 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-24 00:44:11,250 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-24 00:44:11,261 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-24 00:44:11,272 [ scc.git] DEBUG Already up to date.
2024-06-24 00:44:11,273 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-06-24 00:44:11,762 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2024-06-24 00:44:11,762 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2024-06-24 00:44:11,770 [ scc.git] DEBUG ## Unique users: []
2024-06-24 00:44:11,770 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:11,770 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:11,779 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-06-24 00:44:11,788 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:11,797 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-06-24 00:44:11,815 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2024-06-24 00:44:11,815 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2024-06-24 00:44:11,815 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2024-06-24 00:44:11,815 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2024-06-24 00:44:11,816 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2024-06-24 00:44:11,816 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2024-06-24 00:44:11,816 [ scc.git] DEBUG Auto-merging setup.py
2024-06-24 00:44:11,816 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2024-06-24 00:44:11,816 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-06-24 00:44:11,817 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-06-24 00:44:11,827 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319'
2024-06-24 00:44:11,838 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0
2024-06-24 00:44:12,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:12,028 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-06-24 00:44:12,039 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319'
2024-06-24 00:44:12,049 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#106](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_signup/urls.py
- omero_signup/signup_settings.py
- omero_signup/views.py
- setup.py
--conflicts
2024-06-24 00:44:12,058 [ scc.config] DEBUG Found github.token
2024-06-24 00:44:12,058 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2024-06-24 00:44:12,058 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-24 00:44:12,119 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:12,119 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:12,126 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-24 00:44:12,185 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-24 00:44:12,196 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5e3c3d4f40> has no local changes
2024-06-24 00:44:12,196 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/)'
2024-06-24 00:44:12,211 [ scc.git] DEBUG [detached HEAD 093a7af] merge master -Dorg -Ssuccess-only
2024-06-24 00:44:12,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:12,213 [ scc.repo] DEBUG ## PRs found:
2024-06-24 00:44:12,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2024-06-24 00:44:12,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2024-06-24 00:44:13,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2024-06-24 00:44:13,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-06-24 00:44:14,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-24 00:44:14,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-06-24 00:44:15,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2024-06-24 00:44:15,331 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-06-24 00:44:15,331 [ scc.repo] DEBUG ## Branches found:
2024-06-24 00:44:15,331 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-06-24 00:44:15,331 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:15,331 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:15,343 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-24 00:44:15,350 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-24 00:44:15,350 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-24 00:44:15,357 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-24 00:44:15,364 [ scc.git] DEBUG Already up to date.
2024-06-24 00:44:15,365 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2024-06-24 00:44:15,739 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2024-06-24 00:44:15,739 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD
2024-06-24 00:44:15,743 [ scc.git] DEBUG ## Unique users: []
2024-06-24 00:44:15,744 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:15,744 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:15,750 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2024-06-24 00:44:15,758 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:15,765 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2024-06-24 00:44:15,827 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-24 00:44:15,830 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++
2024-06-24 00:44:15,830 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++
2024-06-24 00:44:15,830 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++
2024-06-24 00:44:15,830 [ scc.git] DEBUG idr/70-reset-password.sh | 1 +
2024-06-24 00:44:15,831 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 +
2024-06-24 00:44:15,831 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 +
2024-06-24 00:44:15,831 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++
2024-06-24 00:44:15,831 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++
2024-06-24 00:44:15,831 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++
2024-06-24 00:44:15,831 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2024-06-24 00:44:15,831 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++
2024-06-24 00:44:15,833 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++
2024-06-24 00:44:15,833 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++
2024-06-24 00:44:15,833 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++
2024-06-24 00:44:15,833 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++
2024-06-24 00:44:15,833 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++
2024-06-24 00:44:15,833 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++
2024-06-24 00:44:15,833 [ scc.git] DEBUG idr/omero/Dockerfile | 3 +
2024-06-24 00:44:15,833 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++
2024-06-24 00:44:15,833 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++
2024-06-24 00:44:15,833 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++
2024-06-24 00:44:15,833 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++
2024-06-24 00:44:15,833 [ scc.git] DEBUG 22 files changed, 824 insertions(+)
2024-06-24 00:44:15,833 [ scc.git] DEBUG create mode 100644 idr-compose.yml
2024-06-24 00:44:15,833 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml
2024-06-24 00:44:15,833 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh
2024-06-24 00:44:15,833 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh
2024-06-24 00:44:15,833 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf
2024-06-24 00:44:15,834 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf
2024-06-24 00:44:15,834 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2024-06-24 00:44:15,834 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2024-06-24 00:44:15,834 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf
2024-06-24 00:44:15,834 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2024-06-24 00:44:15,834 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2024-06-24 00:44:15,834 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2024-06-24 00:44:15,834 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2024-06-24 00:44:15,834 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2024-06-24 00:44:15,834 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2024-06-24 00:44:15,834 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2024-06-24 00:44:15,834 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf
2024-06-24 00:44:15,834 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile
2024-06-24 00:44:15,834 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml
2024-06-24 00:44:15,834 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile
2024-06-24 00:44:15,834 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile
2024-06-24 00:44:15,834 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml
2024-06-24 00:44:15,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:15,993 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-24 00:44:16,037 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:16,037 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:16,044 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-24 00:44:16,084 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-24 00:44:16,091 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5e3c33e730> has no local changes
2024-06-24 00:44:16,091 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
Generated by OMERO-plugins-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/)'
2024-06-24 00:44:16,101 [ scc.git] DEBUG [detached HEAD fc2f61f] merge master -Dorg -Ssuccess-only
2024-06-24 00:44:16,101 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:16,101 [ scc.repo] DEBUG ## PRs found:
2024-06-24 00:44:16,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2
2024-06-24 00:44:16,432 [ scc.repo] DEBUG ## Branches found:
2024-06-24 00:44:16,433 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-06-24 00:44:16,433 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:16,433 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:16,442 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-24 00:44:16,448 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-24 00:44:16,448 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-24 00:44:16,455 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-24 00:44:16,462 [ scc.git] DEBUG Already up to date.
2024-06-24 00:44:16,463 [ scc.git] DEBUG ## Unique users: []
2024-06-24 00:44:16,463 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:16,463 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:16,468 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-24 00:44:16,509 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:16,510 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:16,516 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-24 00:44:16,558 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-24 00:44:16,566 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5e3c34eb80> has no local changes
2024-06-24 00:44:16,566 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Already up to date.
Generated by OMERO-plugins-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/)'
2024-06-24 00:44:16,579 [ scc.git] DEBUG [detached HEAD d712e77] merge master -Dorg -Ssuccess-only
2024-06-24 00:44:16,580 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:16,580 [ scc.repo] DEBUG ## PRs found:
2024-06-24 00:44:16,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2
2024-06-24 00:44:16,865 [ scc.repo] DEBUG ## Branches found:
2024-06-24 00:44:16,865 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-06-24 00:44:16,865 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:16,865 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:16,877 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-24 00:44:16,887 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-24 00:44:16,888 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-24 00:44:16,901 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-24 00:44:16,913 [ scc.git] DEBUG Already up to date.
2024-06-24 00:44:16,913 [ scc.git] DEBUG ## Unique users: []
2024-06-24 00:44:16,913 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:16,913 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:16,924 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-24 00:44:16,974 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:16,975 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:16,986 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-24 00:44:17,048 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-24 00:44:17,059 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5e3c396d90> has no local changes
2024-06-24 00:44:17,059 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Already up to date.
Generated by OMERO-plugins-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/)'
2024-06-24 00:44:17,074 [ scc.git] DEBUG [detached HEAD eb04d82] merge master -Dorg -Ssuccess-only
2024-06-24 00:44:17,075 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:17,075 [ scc.git] INFO Overriding base-branch from master to main
2024-06-24 00:44:17,075 [ scc.repo] DEBUG ## PRs found:
2024-06-24 00:44:17,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2024-06-24 00:44:17,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2024-06-24 00:44:18,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2024-06-24 00:44:18,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2024-06-24 00:44:19,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-06-24 00:44:19,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-24 00:44:20,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-24 00:44:20,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-06-24 00:44:21,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2024-06-24 00:44:21,237 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-06-24 00:44:21,237 [ scc.repo] DEBUG ## Branches found:
2024-06-24 00:44:21,238 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-06-24 00:44:21,238 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:21,238 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:21,248 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2024-06-24 00:44:21,258 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-24 00:44:21,258 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2024-06-24 00:44:21,268 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2024-06-24 00:44:21,278 [ scc.git] DEBUG Already up to date.
2024-06-24 00:44:21,279 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2024-06-24 00:44:21,681 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2024-06-24 00:44:21,681 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2024-06-24 00:44:21,688 [ scc.git] DEBUG ## Unique users: []
2024-06-24 00:44:21,688 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:21,688 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:21,697 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-06-24 00:44:21,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:21,715 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-06-24 00:44:21,732 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2024-06-24 00:44:21,732 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2024-06-24 00:44:21,733 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-06-24 00:44:21,733 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-06-24 00:44:21,746 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-06-24 00:44:21,758 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0
2024-06-24 00:44:21,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:21,923 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-06-24 00:44:21,935 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-06-24 00:44:21,944 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#106](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2024-06-24 00:44:21,953 [ scc.config] DEBUG Found github.token
2024-06-24 00:44:21,954 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2024-06-24 00:44:21,954 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-24 00:44:22,021 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:22,021 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:22,030 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-24 00:44:22,095 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-24 00:44:22,107 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5e3c37aee0> has no local changes
2024-06-24 00:44:22,107 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/)'
2024-06-24 00:44:22,121 [ scc.git] DEBUG [detached HEAD eb6adf4] merge master -Dorg -Ssuccess-only
2024-06-24 00:44:22,122 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:22,122 [ scc.repo] DEBUG ## PRs found:
2024-06-24 00:44:22,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2
2024-06-24 00:44:22,348 [ scc.repo] DEBUG ## Branches found:
2024-06-24 00:44:22,348 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-06-24 00:44:22,348 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:22,348 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:22,358 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-24 00:44:22,366 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-24 00:44:22,367 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-24 00:44:22,375 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-24 00:44:22,383 [ scc.git] DEBUG Already up to date.
2024-06-24 00:44:22,384 [ scc.git] DEBUG ## Unique users: []
2024-06-24 00:44:22,384 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:22,384 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:22,391 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-24 00:44:22,456 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:22,457 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:22,466 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-24 00:44:22,523 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-24 00:44:22,533 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5e3c344e80> has no local changes
2024-06-24 00:44:22,533 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Already up to date.
Generated by OMERO-plugins-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/)'
2024-06-24 00:44:22,545 [ scc.git] DEBUG [detached HEAD d6f5240] merge master -Dorg -Ssuccess-only
2024-06-24 00:44:22,546 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:22,546 [ scc.repo] DEBUG ## PRs found:
2024-06-24 00:44:22,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2
2024-06-24 00:44:22,789 [ scc.repo] DEBUG ## Branches found:
2024-06-24 00:44:22,789 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-06-24 00:44:22,790 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:22,790 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:22,798 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-24 00:44:22,802 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-24 00:44:22,803 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-24 00:44:22,808 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-24 00:44:22,813 [ scc.git] DEBUG Already up to date.
2024-06-24 00:44:22,814 [ scc.git] DEBUG ## Unique users: []
2024-06-24 00:44:22,814 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:22,814 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:22,819 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-24 00:44:22,886 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:22,886 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:22,896 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-24 00:44:22,962 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-24 00:44:22,973 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5e3c2ba400> has no local changes
2024-06-24 00:44:22,973 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Already up to date.
Generated by OMERO-plugins-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/)'
2024-06-24 00:44:22,989 [ scc.git] DEBUG [detached HEAD 6e56a70] merge master -Dorg -Ssuccess-only
2024-06-24 00:44:22,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:22,990 [ scc.repo] DEBUG ## PRs found:
2024-06-24 00:44:23,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2024-06-24 00:44:23,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2024-06-24 00:44:24,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2024-06-24 00:44:24,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-06-24 00:44:25,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-24 00:44:25,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-06-24 00:44:26,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2024-06-24 00:44:26,122 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2024-06-24 00:44:26,122 [ scc.repo] DEBUG ## Branches found:
2024-06-24 00:44:26,122 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-06-24 00:44:26,122 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:26,122 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:26,132 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-24 00:44:26,140 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-24 00:44:26,140 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-24 00:44:26,148 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-24 00:44:26,157 [ scc.git] DEBUG Already up to date.
2024-06-24 00:44:26,157 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2024-06-24 00:44:26,552 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2024-06-24 00:44:26,553 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2024-06-24 00:44:26,561 [ scc.git] DEBUG ## Unique users: []
2024-06-24 00:44:26,561 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:26,561 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:26,569 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-06-24 00:44:26,578 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:26,586 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-06-24 00:44:26,648 [ scc.git] DEBUG Auto-merging Dockerfile
2024-06-24 00:44:26,649 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2024-06-24 00:44:26,649 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-06-24 00:44:26,649 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-06-24 00:44:26,658 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-06-24 00:44:26,668 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2024-06-24 00:44:26,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:26,868 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-06-24 00:44:26,882 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-06-24 00:44:26,896 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#106](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2024-06-24 00:44:26,908 [ scc.config] DEBUG Found github.token
2024-06-24 00:44:26,908 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2024-06-24 00:44:26,909 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-24 00:44:26,958 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:26,958 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:26,967 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-24 00:44:27,021 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-24 00:44:27,031 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5e3c2feb80> has no local changes
2024-06-24 00:44:27,032 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/)'
2024-06-24 00:44:27,044 [ scc.git] DEBUG [detached HEAD d227fa3] merge master -Dorg -Ssuccess-only
2024-06-24 00:44:27,044 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:27,045 [ scc.git] INFO Overriding base-branch from master to develop
2024-06-24 00:44:27,045 [ scc.repo] DEBUG ## PRs found:
2024-06-24 00:44:27,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-06-24 00:44:27,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-06-24 00:44:28,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-06-24 00:44:28,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-06-24 00:44:29,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-06-24 00:44:29,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-06-24 00:44:30,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-06-24 00:44:30,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-06-24 00:44:31,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-24 00:44:31,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-06-24 00:44:32,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-06-24 00:44:32,089 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-06-24 00:44:32,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-06-24 00:44:33,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-06-24 00:44:33,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-06-24 00:44:34,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-06-24 00:44:34,117 [ scc.repo] DEBUG ## Branches found:
2024-06-24 00:44:34,117 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-06-24 00:44:34,118 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:34,118 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:34,124 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-06-24 00:44:34,131 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-24 00:44:34,131 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-06-24 00:44:34,138 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-06-24 00:44:34,145 [ scc.git] DEBUG Already up to date.
2024-06-24 00:44:34,146 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-06-24 00:44:34,592 [ scc.git] DEBUG From https://github.com/ome/scripts
2024-06-24 00:44:34,593 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-06-24 00:44:34,598 [ scc.git] DEBUG ## Unique users: []
2024-06-24 00:44:34,598 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:34,598 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:34,605 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-06-24 00:44:34,614 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:34,620 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-06-24 00:44:34,641 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-06-24 00:44:34,642 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-06-24 00:44:34,642 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-06-24 00:44:34,642 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-06-24 00:44:34,648 [ scc.git] DEBUG Calling 'git reset --hard c20d2734b711c659cecea83db6e2ebd7b7013636'
2024-06-24 00:44:34,654 [ scc.git] DEBUG HEAD is now at c20d273 Merge pull request #221 from imcf/fix-typechecking
2024-06-24 00:44:34,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:34,810 [ scc.git] DEBUG Calling 'git merge-base c20d2734b711c659cecea83db6e2ebd7b7013636 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-06-24 00:44:34,819 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..c20d2734b711c659cecea83db6e2ebd7b7013636'
2024-06-24 00:44:34,826 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#106](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-06-24 00:44:34,831 [ scc.config] DEBUG Found github.token
2024-06-24 00:44:34,831 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-06-24 00:44:34,832 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-24 00:44:34,868 [ scc.git] DEBUG Get sha1 of %s
2024-06-24 00:44:34,869 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-24 00:44:34,874 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-24 00:44:34,911 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-24 00:44:34,919 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5e3c307d00> has no local changes
2024-06-24 00:44:34,919 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/)'
2024-06-24 00:44:34,928 [ scc.git] DEBUG [detached HEAD 02b2e95] merge master -Dorg -Ssuccess-only
2024-06-24 00:44:34,928 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:34,929 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-24 00:44:35,004 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2024-06-24 00:44:35,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:35,243 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2024-06-24 00:44:35,248 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2024-06-24 00:44:35,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:35,661 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2024-06-24 00:44:35,666 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2024-06-24 00:44:36,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:36,070 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2024-06-24 00:44:36,075 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2024-06-24 00:44:36,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:36,515 [ scc.config] DEBUG Found submodule.omero-figure.url
2024-06-24 00:44:36,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:36,919 [ scc.config] DEBUG Found submodule.omero-figure.branch
2024-06-24 00:44:36,924 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2024-06-24 00:44:37,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:37,337 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2024-06-24 00:44:37,342 [ scc.config] DEBUG Found submodule.omero-gallery.url
2024-06-24 00:44:37,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:37,753 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2024-06-24 00:44:37,759 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2024-06-24 00:44:38,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:38,180 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2024-06-24 00:44:38,187 [ scc.config] DEBUG Found submodule.omero-mapr.url
2024-06-24 00:44:38,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:38,587 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2024-06-24 00:44:38,593 [ scc.config] DEBUG Found submodule.omero-metadata.url
2024-06-24 00:44:38,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:38,998 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2024-06-24 00:44:39,003 [ scc.config] DEBUG Found submodule.omero-parade.url
2024-06-24 00:44:39,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:39,408 [ scc.config] DEBUG Found submodule.omero-parade.branch
2024-06-24 00:44:39,412 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2024-06-24 00:44:39,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:39,822 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2024-06-24 00:44:39,828 [ scc.config] DEBUG Found submodule.omero-rois.url
2024-06-24 00:44:40,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:40,251 [ scc.config] DEBUG Found submodule.omero-signup.url
2024-06-24 00:44:40,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:40,671 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2024-06-24 00:44:41,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:41,072 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2024-06-24 00:44:41,077 [ scc.config] DEBUG Found submodule.omero-upload.url
2024-06-24 00:44:41,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:41,492 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2024-06-24 00:44:41,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:41,901 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2024-06-24 00:44:42,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:42,304 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2024-06-24 00:44:42,311 [ scc.config] DEBUG Found submodule.omero-weberror.url
2024-06-24 00:44:42,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:42,729 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2024-06-24 00:44:42,734 [ scc.config] DEBUG Found submodule.omero-webtest.url
2024-06-24 00:44:43,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:43,143 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2024-06-24 00:44:43,149 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2024-06-24 00:44:43,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:43,563 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2024-06-24 00:44:43,570 [ scc.config] DEBUG Found submodule.scripts.url
2024-06-24 00:44:43,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-24 00:44:43,981 [ scc.config] DEBUG Found submodule.scripts.branch
2024-06-24 00:44:43,981 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-24 00:44:44,066 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5e3d75b160> has local changes
2024-06-24 00:44:44,066 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`'
Repository: ome/minimal-omero-client
Already up to date.
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Merged PRs:
- PR 25 jburel 'review message'
Repository: ome/omero-cli-render
Excluded PRs:
- PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
- PR 54 dominikl 'Change rendering settings spec' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
- PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 63 sbesson 'Remove python-future dependency'
- PR 64 sbesson 'Fix thumbnail generation with missing rendering definition'
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft)
Already up to date.
Merged PRs:
- PR 147 will-moore 'Name option'
Conflicting PRs (not included):
- PR 102 will-moore 'Zarr export tests'
- PR 123 will-moore 'Support export of Fileset:ID'
Repository: ome/omero-figure
Excluded PRs:
- PR 560 will-moore 'Max projection bytes' (exclude comment)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Already up to date.
Merged PRs:
- PR 549 will-moore 'Inset feature'
- PR 555 will-moore 'Points in shape editor'
- PR 568 will-moore 'Remove numpy from tests_require in setup.py'
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Already up to date.
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 477 dependabot[bot] 'Bump ws and socket.io'
- PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
Repository: ome/omero-metadata
Already up to date.
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
- PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
- PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 14 jburel 'use conda-forge channel'
Repository: ome/omero-rois
Excluded PRs:
- PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 6 dominikl 'Add method to create masks grouped by label id'
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
Repository: ome/omero-upload
Already up to date.
Repository: ome/omero-virtual-microscope
Already up to date.
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Already up to date.
Repository: openmicroscopy/omero-webtest
Already up to date.
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/106/)'
2024-06-24 00:44:44,082 [ scc.git] DEBUG [detached HEAD 519e892] merge master -Dorg -Ssuccess-only
2024-06-24 00:44:44,082 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2024-06-24 00:44:44,082 [ scc.merge] INFO Repository: ome/omero-plugins
2024-06-24 00:44:44,082 [ scc.merge] INFO Already up to date.
2024-06-24 00:44:44,082 [ scc.merge] INFO
2024-06-24 00:44:44,082 [ scc.merge] INFO Merged PRs:
2024-06-24 00:44:44,082 [ scc.merge] INFO - PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`'
2024-06-24 00:44:44,082 [ scc.merge] INFO
2024-06-24 00:44:44,082 [ scc.merge] INFO Repository: ome/minimal-omero-client
2024-06-24 00:44:44,083 [ scc.merge] INFO Already up to date.
2024-06-24 00:44:44,083 [ scc.merge] INFO
2024-06-24 00:44:44,083 [ scc.merge] INFO
2024-06-24 00:44:44,083 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2024-06-24 00:44:44,083 [ scc.merge] INFO Excluded PRs:
2024-06-24 00:44:44,083 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2024-06-24 00:44:44,083 [ scc.merge] INFO Already up to date.
2024-06-24 00:44:44,083 [ scc.merge] INFO
2024-06-24 00:44:44,083 [ scc.merge] INFO Merged PRs:
2024-06-24 00:44:44,083 [ scc.merge] INFO - PR 25 jburel 'review message'
2024-06-24 00:44:44,083 [ scc.merge] INFO
2024-06-24 00:44:44,083 [ scc.merge] INFO Repository: ome/omero-cli-render
2024-06-24 00:44:44,083 [ scc.merge] INFO Excluded PRs:
2024-06-24 00:44:44,083 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
2024-06-24 00:44:44,083 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft)
2024-06-24 00:44:44,083 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2024-06-24 00:44:44,083 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft)
2024-06-24 00:44:44,083 [ scc.merge] INFO Already up to date.
2024-06-24 00:44:44,083 [ scc.merge] INFO
2024-06-24 00:44:44,083 [ scc.merge] INFO Merged PRs:
2024-06-24 00:44:44,083 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate'
2024-06-24 00:44:44,083 [ scc.merge] INFO - PR 63 sbesson 'Remove python-future dependency'
2024-06-24 00:44:44,083 [ scc.merge] INFO - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition'
2024-06-24 00:44:44,083 [ scc.merge] INFO
2024-06-24 00:44:44,083 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2024-06-24 00:44:44,083 [ scc.merge] INFO Excluded PRs:
2024-06-24 00:44:44,083 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-06-24 00:44:44,083 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft)
2024-06-24 00:44:44,083 [ scc.merge] INFO Already up to date.
2024-06-24 00:44:44,083 [ scc.merge] INFO
2024-06-24 00:44:44,083 [ scc.merge] INFO Merged PRs:
2024-06-24 00:44:44,083 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2024-06-24 00:44:44,083 [ scc.merge] INFO
2024-06-24 00:44:44,083 [ scc.merge] INFO Conflicting PRs (not included):
2024-06-24 00:44:44,084 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests'
2024-06-24 00:44:44,084 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID'
2024-06-24 00:44:44,084 [ scc.merge] INFO
2024-06-24 00:44:44,084 [ scc.merge] INFO Repository: ome/omero-figure
2024-06-24 00:44:44,084 [ scc.merge] INFO Excluded PRs:
2024-06-24 00:44:44,084 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes' (exclude comment)
2024-06-24 00:44:44,084 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment)
2024-06-24 00:44:44,084 [ scc.merge] INFO Already up to date.
2024-06-24 00:44:44,084 [ scc.merge] INFO
2024-06-24 00:44:44,084 [ scc.merge] INFO Merged PRs:
2024-06-24 00:44:44,084 [ scc.merge] INFO - PR 549 will-moore 'Inset feature'
2024-06-24 00:44:44,084 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor'
2024-06-24 00:44:44,084 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py'
2024-06-24 00:44:44,084 [ scc.merge] INFO
2024-06-24 00:44:44,084 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2024-06-24 00:44:44,084 [ scc.merge] INFO Already up to date.
2024-06-24 00:44:44,084 [ scc.merge] INFO
2024-06-24 00:44:44,084 [ scc.merge] INFO Merged PRs:
2024-06-24 00:44:44,084 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2024-06-24 00:44:44,084 [ scc.merge] INFO
2024-06-24 00:44:44,084 [ scc.merge] INFO Repository: ome/omero-gallery
2024-06-24 00:44:44,084 [ scc.merge] INFO Already up to date.
2024-06-24 00:44:44,084 [ scc.merge] INFO
2024-06-24 00:44:44,084 [ scc.merge] INFO Merged PRs:
2024-06-24 00:44:44,084 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'
2024-06-24 00:44:44,084 [ scc.merge] INFO
2024-06-24 00:44:44,084 [ scc.merge] INFO Repository: ome/omero-iviewer
2024-06-24 00:44:44,084 [ scc.merge] INFO Excluded PRs:
2024-06-24 00:44:44,084 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2024-06-24 00:44:44,084 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2024-06-24 00:44:44,084 [ scc.merge] INFO Already up to date.
2024-06-24 00:44:44,084 [ scc.merge] INFO
2024-06-24 00:44:44,084 [ scc.merge] INFO Merged PRs:
2024-06-24 00:44:44,084 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2024-06-24 00:44:44,084 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2024-06-24 00:44:44,085 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2024-06-24 00:44:44,085 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io'
2024-06-24 00:44:44,085 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5'
2024-06-24 00:44:44,085 [ scc.merge] INFO
2024-06-24 00:44:44,085 [ scc.merge] INFO Repository: ome/omero-mapr
2024-06-24 00:44:44,085 [ scc.merge] INFO Excluded PRs:
2024-06-24 00:44:44,085 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2024-06-24 00:44:44,085 [ scc.merge] INFO Already up to date.
2024-06-24 00:44:44,085 [ scc.merge] INFO
2024-06-24 00:44:44,085 [ scc.merge] INFO Merged PRs:
2024-06-24 00:44:44,085 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2024-06-24 00:44:44,085 [ scc.merge] INFO
2024-06-24 00:44:44,085 [ scc.merge] INFO Repository: ome/omero-metadata
2024-06-24 00:44:44,085 [ scc.merge] INFO Already up to date.
2024-06-24 00:44:44,085 [ scc.merge] INFO
2024-06-24 00:44:44,085 [ scc.merge] INFO Conflicting PRs (not included):
2024-06-24 00:44:44,085 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-06-24 00:44:44,085 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-06-24 00:44:44,085 [ scc.merge] INFO
2024-06-24 00:44:44,085 [ scc.merge] INFO Repository: ome/omero-parade
2024-06-24 00:44:44,085 [ scc.merge] INFO Excluded PRs:
2024-06-24 00:44:44,085 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2024-06-24 00:44:44,085 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2024-06-24 00:44:44,085 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2024-06-24 00:44:44,085 [ scc.merge] INFO Already up to date.
2024-06-24 00:44:44,085 [ scc.merge] INFO
2024-06-24 00:44:44,085 [ scc.merge] INFO Merged PRs:
2024-06-24 00:44:44,085 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
2024-06-24 00:44:44,085 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
2024-06-24 00:44:44,085 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
2024-06-24 00:44:44,085 [ scc.merge] INFO
2024-06-24 00:44:44,085 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2024-06-24 00:44:44,085 [ scc.merge] INFO Already up to date.
2024-06-24 00:44:44,085 [ scc.merge] INFO
2024-06-24 00:44:44,085 [ scc.merge] INFO Merged PRs:
2024-06-24 00:44:44,086 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel'
2024-06-24 00:44:44,086 [ scc.merge] INFO
2024-06-24 00:44:44,086 [ scc.merge] INFO Repository: ome/omero-rois
2024-06-24 00:44:44,086 [ scc.merge] INFO Excluded PRs:
2024-06-24 00:44:44,086 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-06-24 00:44:44,086 [ scc.merge] INFO Already up to date.
2024-06-24 00:44:44,086 [ scc.merge] INFO
2024-06-24 00:44:44,086 [ scc.merge] INFO Merged PRs:
2024-06-24 00:44:44,086 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-06-24 00:44:44,086 [ scc.merge] INFO
2024-06-24 00:44:44,086 [ scc.merge] INFO Repository: ome/omero-signup
2024-06-24 00:44:44,086 [ scc.merge] INFO Already up to date.
2024-06-24 00:44:44,086 [ scc.merge] INFO
2024-06-24 00:44:44,086 [ scc.merge] INFO Conflicting PRs (not included):
2024-06-24 00:44:44,086 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2024-06-24 00:44:44,086 [ scc.merge] INFO
2024-06-24 00:44:44,086 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2024-06-24 00:44:44,086 [ scc.merge] INFO Already up to date.
2024-06-24 00:44:44,086 [ scc.merge] INFO
2024-06-24 00:44:44,086 [ scc.merge] INFO Merged PRs:
2024-06-24 00:44:44,086 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-06-24 00:44:44,086 [ scc.merge] INFO
2024-06-24 00:44:44,086 [ scc.merge] INFO Repository: ome/omero-upload
2024-06-24 00:44:44,086 [ scc.merge] INFO Already up to date.
2024-06-24 00:44:44,086 [ scc.merge] INFO
2024-06-24 00:44:44,086 [ scc.merge] INFO
2024-06-24 00:44:44,086 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2024-06-24 00:44:44,086 [ scc.merge] INFO Already up to date.
2024-06-24 00:44:44,086 [ scc.merge] INFO
2024-06-24 00:44:44,086 [ scc.merge] INFO
2024-06-24 00:44:44,086 [ scc.merge] INFO Repository: ome/omero-web-zarr
2024-06-24 00:44:44,086 [ scc.merge] INFO Excluded PRs:
2024-06-24 00:44:44,086 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2024-06-24 00:44:44,086 [ scc.merge] INFO Already up to date.
2024-06-24 00:44:44,086 [ scc.merge] INFO
2024-06-24 00:44:44,087 [ scc.merge] INFO Conflicting PRs (not included):
2024-06-24 00:44:44,087 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-06-24 00:44:44,087 [ scc.merge] INFO
2024-06-24 00:44:44,087 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2024-06-24 00:44:44,087 [ scc.merge] INFO Already up to date.
2024-06-24 00:44:44,087 [ scc.merge] INFO
2024-06-24 00:44:44,087 [ scc.merge] INFO
2024-06-24 00:44:44,087 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2024-06-24 00:44:44,087 [ scc.merge] INFO Already up to date.
2024-06-24 00:44:44,087 [ scc.merge] INFO
2024-06-24 00:44:44,087 [ scc.merge] INFO
2024-06-24 00:44:44,087 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2024-06-24 00:44:44,087 [ scc.merge] INFO Already up to date.
2024-06-24 00:44:44,087 [ scc.merge] INFO
2024-06-24 00:44:44,087 [ scc.merge] INFO Conflicting PRs (not included):
2024-06-24 00:44:44,087 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2024-06-24 00:44:44,087 [ scc.merge] INFO
2024-06-24 00:44:44,087 [ scc.merge] INFO Repository: ome/scripts
2024-06-24 00:44:44,087 [ scc.merge] INFO Excluded PRs:
2024-06-24 00:44:44,087 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-06-24 00:44:44,087 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-06-24 00:44:44,087 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-06-24 00:44:44,087 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-06-24 00:44:44,087 [ scc.merge] INFO Already up to date.
2024-06-24 00:44:44,087 [ scc.merge] INFO
2024-06-24 00:44:44,087 [ scc.merge] INFO Conflicting PRs (not included):
2024-06-24 00:44:44,087 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-06-24 00:44:44,087 [ scc.merge] INFO
2024-06-24 00:44:44,087 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-06-24 00:44:44,087 [ scc.git] DEBUG Calling 'git remote'
2024-06-24 00:44:44,094 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2024-06-24 00:44:44,094 [ scc.git] DEBUG Calling 'git remote'
2024-06-24 00:44:44,100 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:44,100 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2024-06-24 00:44:44,100 [ scc.git] DEBUG Calling 'git remote'
2024-06-24 00:44:44,106 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:44,106 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2024-06-24 00:44:44,106 [ scc.git] DEBUG Calling 'git remote'
2024-06-24 00:44:44,112 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:44,112 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2024-06-24 00:44:44,112 [ scc.git] DEBUG Calling 'git remote'
2024-06-24 00:44:44,122 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:44,123 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2024-06-24 00:44:44,123 [ scc.git] DEBUG Calling 'git remote'
2024-06-24 00:44:44,132 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:44,133 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2024-06-24 00:44:44,133 [ scc.git] DEBUG Calling 'git remote'
2024-06-24 00:44:44,142 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:44,143 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-06-24 00:44:44,143 [ scc.git] DEBUG Calling 'git remote'
2024-06-24 00:44:44,152 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:44,152 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-06-24 00:44:44,152 [ scc.git] DEBUG Calling 'git remote'
2024-06-24 00:44:44,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:44,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-06-24 00:44:44,160 [ scc.git] DEBUG Calling 'git remote'
2024-06-24 00:44:44,168 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:44,168 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-06-24 00:44:44,168 [ scc.git] DEBUG Calling 'git remote'
2024-06-24 00:44:44,177 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:44,177 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-06-24 00:44:44,177 [ scc.git] DEBUG Calling 'git remote'
2024-06-24 00:44:44,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:44,184 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-06-24 00:44:44,184 [ scc.git] DEBUG Calling 'git remote'
2024-06-24 00:44:44,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:44,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-06-24 00:44:44,192 [ scc.git] DEBUG Calling 'git remote'
2024-06-24 00:44:44,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:44,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-06-24 00:44:44,200 [ scc.git] DEBUG Calling 'git remote'
2024-06-24 00:44:44,208 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:44,208 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-06-24 00:44:44,208 [ scc.git] DEBUG Calling 'git remote'
2024-06-24 00:44:44,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:44,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-06-24 00:44:44,215 [ scc.git] DEBUG Calling 'git remote'
2024-06-24 00:44:44,222 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:44,222 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-06-24 00:44:44,222 [ scc.git] DEBUG Calling 'git remote'
2024-06-24 00:44:44,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:44,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-06-24 00:44:44,229 [ scc.git] DEBUG Calling 'git remote'
2024-06-24 00:44:44,236 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:44,236 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-06-24 00:44:44,236 [ scc.git] DEBUG Calling 'git remote'
2024-06-24 00:44:44,243 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:44,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-06-24 00:44:44,244 [ scc.git] DEBUG Calling 'git remote'
2024-06-24 00:44:44,250 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:44,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-06-24 00:44:44,251 [ scc.git] DEBUG Calling 'git remote'
2024-06-24 00:44:44,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-24 00:44:44,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-06-24 00:44:44,257 [ scc.git] DEBUG Calling 'git remote'
2024-06-24 00:44:44,263 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.9.1 to 5.9.2-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD cde556d] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
HEAD detached from 027b3e6
nothing to commit, working tree clean
Entering 'omero-cli-render'
HEAD detached from 53e3f42
nothing to commit, working tree clean
Entering 'omero-cli-zarr'
HEAD detached from 2ca566b
Untracked files:
(use "git add <file>..." to include in what will be committed)
.eggs/
nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
HEAD detached from 9ffbc8b7
nothing to commit, working tree clean
Entering 'omero-fpbioimage'
HEAD detached from e5b3ca3
nothing to commit, working tree clean
Entering 'omero-gallery'
HEAD detached from 56f4435
nothing to commit, working tree clean
Entering 'omero-iviewer'
HEAD detached from a8f380f
nothing to commit, working tree clean
Entering 'omero-mapr'
HEAD detached from 9631b15
nothing to commit, working tree clean
Entering 'omero-metadata'
HEAD detached from e2fc5ec
nothing to commit, working tree clean
Entering 'omero-parade'
HEAD detached from 5d441c2
nothing to commit, working tree clean
Entering 'omero-prometheus-tools'
HEAD detached from 18bccb6
nothing to commit, working tree clean
Entering 'omero-rois'
HEAD detached from 5c752d5
nothing to commit, working tree clean
Entering 'omero-signup'
HEAD detached from c8610db
nothing to commit, working tree clean
Entering 'omero-test-infra'
HEAD detached from cda3ec6
nothing to commit, working tree clean
Entering 'omero-upload'
HEAD detached from aca9e9c
nothing to commit, working tree clean
Entering 'omero-virtual-microscope'
HEAD detached from deab817
nothing to commit, working tree clean
Entering 'omero-web-zarr'
HEAD detached from 67bb245
nothing to commit, working tree clean
Entering 'omero-weberror'
HEAD detached from adfa132
nothing to commit, working tree clean
Entering 'omero-webtest'
HEAD detached from 8da48e1
nothing to commit, working tree clean
Entering 'rOMERO-gateway'
HEAD detached from 7b5d64d
nothing to commit, working tree clean
Entering 'scripts'
HEAD detached from c20d273
nothing to commit, working tree clean
[detached HEAD 3c2cdfe] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2024-06-24 00:45:31,354 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2024-06-24 00:45:40,439 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2024-06-24 00:45:42,794 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-06-24 00:45:47,370 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-06-24 00:46:34,517 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
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