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- src/omero_zarr/raw_pixels.py
- .isort.cfg
--conflicts
2024-06-25 00:43:45,316 [ scc.config] DEBUG Found github.token
2024-06-25 00:43:45,317 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts.
2024-06-25 00:43:45,317 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef'
2024-06-25 00:43:45,329 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:43:45,336 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef'
2024-06-25 00:43:45,351 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py
2024-06-25 00:43:45,352 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py
2024-06-25 00:43:45,352 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-25 00:43:45,356 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------
2024-06-25 00:43:45,356 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++
2024-06-25 00:43:45,356 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++--
2024-06-25 00:43:45,356 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++-----
2024-06-25 00:43:45,356 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +-
2024-06-25 00:43:45,356 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-)
2024-06-25 00:43:45,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:43:45,731 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-25 00:43:45,781 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:43:45,782 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:43:45,790 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-25 00:43:45,851 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-25 00:43:45,862 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4364c8db50> has no local changes
2024-06-25 00:43:45,863 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft)
Already up to date.
Merged PRs:
- PR 147 will-moore 'Name option'
Conflicting PRs (not included):
- PR 102 will-moore 'Zarr export tests'
- PR 123 will-moore 'Support export of Fileset:ID'
Generated by OMERO-plugins-push#107 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/)'
2024-06-25 00:43:45,877 [ scc.git] DEBUG [detached HEAD 5e66dbe] merge master -Dorg -Ssuccess-only
2024-06-25 00:43:45,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:43:45,878 [ scc.repo] DEBUG ## PRs found:
2024-06-25 00:43:46,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None
2024-06-25 00:43:46,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None
2024-06-25 00:43:47,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None
2024-06-25 00:43:47,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None
2024-06-25 00:43:48,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-25 00:43:48,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-25 00:43:49,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None
2024-06-25 00:43:49,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2
2024-06-25 00:43:49,688 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py'
2024-06-25 00:43:50,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None
2024-06-25 00:43:50,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None
2024-06-25 00:43:51,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None
2024-06-25 00:43:51,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-25 00:43:52,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-25 00:43:52,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None
2024-06-25 00:43:53,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2
2024-06-25 00:43:53,096 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor'
2024-06-25 00:43:53,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None
2024-06-25 00:43:54,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None
2024-06-25 00:43:54,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-25 00:43:55,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-25 00:43:55,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None
2024-06-25 00:43:56,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24?per_page=1 HTTP/1.1" 200 2
2024-06-25 00:43:56,004 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature'
2024-06-25 00:43:56,005 [ scc.repo] DEBUG ## Branches found:
2024-06-25 00:43:56,005 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2024-06-25 00:43:56,005 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:43:56,005 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:43:56,010 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-25 00:43:56,016 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-25 00:43:56,016 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-25 00:43:56,023 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-25 00:43:56,030 [ scc.git] DEBUG Already up to date.
2024-06-25 00:43:56,030 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head'
2024-06-25 00:43:57,572 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2024-06-25 00:43:57,572 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD
2024-06-25 00:43:57,579 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head'
2024-06-25 00:43:58,191 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2024-06-25 00:43:58,192 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD
2024-06-25 00:43:58,198 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head'
2024-06-25 00:43:58,635 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2024-06-25 00:43:58,635 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD
2024-06-25 00:43:58,642 [ scc.git] DEBUG ## Unique users: []
2024-06-25 00:43:58,643 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:43:58,643 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:43:58,652 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24'
2024-06-25 00:43:58,662 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:43:58,670 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) 6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24'
2024-06-25 00:43:58,869 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-25 00:43:58,877 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++-
2024-06-25 00:43:58,877 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++++
2024-06-25 00:43:58,878 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++
2024-06-25 00:43:58,878 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 +++++++++++++-
2024-06-25 00:43:58,878 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 +
2024-06-25 00:43:58,878 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++-
2024-06-25 00:43:58,878 [ scc.git] DEBUG src/js/views/right_panel_view.js | 74 +++++++++++++++++++++++++++++-
2024-06-25 00:43:58,878 [ scc.git] DEBUG src/js/views/util.js | 54 ++++++++++++++++++++++
2024-06-25 00:43:58,878 [ scc.git] DEBUG src/templates/rois_form.template.html | 7 +++
2024-06-25 00:43:58,878 [ scc.git] DEBUG 9 files changed, 270 insertions(+), 5 deletions(-)
2024-06-25 00:43:59,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:43:59,034 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab'
2024-06-25 00:43:59,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:43:59,048 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab'
2024-06-25 00:43:59,217 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js
2024-06-25 00:43:59,217 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js
2024-06-25 00:43:59,217 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js
2024-06-25 00:43:59,217 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-25 00:43:59,224 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +-
2024-06-25 00:43:59,224 [ scc.git] DEBUG src/css/figure.css | 4 +
2024-06-25 00:43:59,224 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes
2024-06-25 00:43:59,224 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +-
2024-06-25 00:43:59,224 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 +
2024-06-25 00:43:59,224 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++-
2024-06-25 00:43:59,224 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +-
2024-06-25 00:43:59,224 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 +
2024-06-25 00:43:59,224 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +-
2024-06-25 00:43:59,224 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 +
2024-06-25 00:43:59,224 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-)
2024-06-25 00:43:59,224 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png
2024-06-25 00:43:59,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:43:59,465 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6'
2024-06-25 00:43:59,473 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:43:59,478 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6'
2024-06-25 00:43:59,519 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-25 00:43:59,522 [ scc.git] DEBUG setup.py | 2 +-
2024-06-25 00:43:59,522 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-06-25 00:43:59,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:43:59,874 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-25 00:43:59,915 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:43:59,915 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:43:59,920 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-25 00:43:59,961 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-25 00:43:59,970 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4364cc22b0> has no local changes
2024-06-25 00:43:59,971 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-figure
Excluded PRs:
- PR 560 will-moore 'Max projection bytes' (exclude comment)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Already up to date.
Merged PRs:
- PR 549 will-moore 'Inset feature'
- PR 555 will-moore 'Points in shape editor'
- PR 568 will-moore 'Remove numpy from tests_require in setup.py'
Generated by OMERO-plugins-push#107 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/)'
2024-06-25 00:43:59,987 [ scc.git] DEBUG [detached HEAD 460568b6] merge master -Dorg -Ssuccess-only
2024-06-25 00:43:59,987 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:43:59,987 [ scc.repo] DEBUG ## PRs found:
2024-06-25 00:44:00,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None
2024-06-25 00:44:00,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None
2024-06-25 00:44:01,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None
2024-06-25 00:44:01,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2024-06-25 00:44:02,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-25 00:44:02,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2024-06-25 00:44:03,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2
2024-06-25 00:44:03,247 [ scc.repo] DEBUG - PR 18 jburel 'default size z value'
2024-06-25 00:44:03,247 [ scc.repo] DEBUG ## Branches found:
2024-06-25 00:44:03,247 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2024-06-25 00:44:03,247 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:44:03,247 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:03,254 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-25 00:44:03,260 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-25 00:44:03,260 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-25 00:44:03,267 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-25 00:44:03,273 [ scc.git] DEBUG Already up to date.
2024-06-25 00:44:03,274 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head'
2024-06-25 00:44:03,652 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2024-06-25 00:44:03,652 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD
2024-06-25 00:44:03,656 [ scc.git] DEBUG ## Unique users: []
2024-06-25 00:44:03,657 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:44:03,657 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:03,663 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337'
2024-06-25 00:44:03,669 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:03,674 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337'
2024-06-25 00:44:03,705 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py
2024-06-25 00:44:03,706 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-25 00:44:03,709 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++
2024-06-25 00:44:03,709 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-06-25 00:44:03,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:44:03,913 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-25 00:44:03,958 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:44:03,958 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:03,965 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-25 00:44:04,009 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-25 00:44:04,016 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4364cc2e20> has no local changes
2024-06-25 00:44:04,017 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
Generated by OMERO-plugins-push#107 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/)'
2024-06-25 00:44:04,025 [ scc.git] DEBUG [detached HEAD 797e687] merge master -Dorg -Ssuccess-only
2024-06-25 00:44:04,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:44:04,026 [ scc.repo] DEBUG ## PRs found:
2024-06-25 00:44:04,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None
2024-06-25 00:44:04,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None
2024-06-25 00:44:04,939 [ scc.repo] DEBUG # ... Include label: dependencies
2024-06-25 00:44:05,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None
2024-06-25 00:44:06,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-25 00:44:06,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-25 00:44:07,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None
2024-06-25 00:44:07,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2
2024-06-25 00:44:07,537 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'
2024-06-25 00:44:07,537 [ scc.repo] DEBUG ## Branches found:
2024-06-25 00:44:07,537 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-06-25 00:44:07,537 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:44:07,537 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:07,543 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-25 00:44:07,548 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-25 00:44:07,548 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-25 00:44:07,554 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-25 00:44:07,559 [ scc.git] DEBUG Already up to date.
2024-06-25 00:44:07,560 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head'
2024-06-25 00:44:07,974 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-06-25 00:44:07,974 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD
2024-06-25 00:44:07,979 [ scc.git] DEBUG ## Unique users: []
2024-06-25 00:44:07,980 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:44:07,980 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:07,985 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893'
2024-06-25 00:44:07,990 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:07,995 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893'
2024-06-25 00:44:08,007 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-25 00:44:08,010 [ scc.git] DEBUG package-lock.json | 18 ++++++------------
2024-06-25 00:44:08,011 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-)
2024-06-25 00:44:08,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:44:08,174 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-25 00:44:08,215 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:44:08,215 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:08,221 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-25 00:44:08,262 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-25 00:44:08,269 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4364cc2310> has no local changes
2024-06-25 00:44:08,270 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'
Generated by OMERO-plugins-push#107 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/)'
2024-06-25 00:44:08,280 [ scc.git] DEBUG [detached HEAD 8f410ca] merge master -Dorg -Ssuccess-only
2024-06-25 00:44:08,280 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:44:08,280 [ scc.repo] DEBUG ## PRs found:
2024-06-25 00:44:08,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None
2024-06-25 00:44:09,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None
2024-06-25 00:44:09,163 [ scc.repo] DEBUG # ... Include label: dependencies
2024-06-25 00:44:09,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None
2024-06-25 00:44:10,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-25 00:44:11,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-25 00:44:11,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None
2024-06-25 00:44:12,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2
2024-06-25 00:44:12,013 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5'
2024-06-25 00:44:12,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None
2024-06-25 00:44:12,481 [ scc.repo] DEBUG # ... Include label: dependencies
2024-06-25 00:44:13,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None
2024-06-25 00:44:13,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-25 00:44:14,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-25 00:44:14,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None
2024-06-25 00:44:14,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2
2024-06-25 00:44:14,975 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io'
2024-06-25 00:44:15,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None
2024-06-25 00:44:15,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None
2024-06-25 00:44:16,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-06-25 00:44:16,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-25 00:44:17,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-25 00:44:17,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-06-25 00:44:18,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2
2024-06-25 00:44:18,348 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip'
2024-06-25 00:44:18,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None
2024-06-25 00:44:19,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None
2024-06-25 00:44:19,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-06-25 00:44:20,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-25 00:44:20,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-25 00:44:21,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-06-25 00:44:21,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2
2024-06-25 00:44:21,680 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure'
2024-06-25 00:44:22,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None
2024-06-25 00:44:22,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None
2024-06-25 00:44:23,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-06-25 00:44:23,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-25 00:44:24,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-06-25 00:44:24,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2
2024-06-25 00:44:24,489 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix'
2024-06-25 00:44:24,489 [ scc.repo] DEBUG ## Branches found:
2024-06-25 00:44:24,489 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-06-25 00:44:24,490 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:44:24,490 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:24,495 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-25 00:44:24,500 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-25 00:44:24,500 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-25 00:44:24,532 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-25 00:44:24,538 [ scc.git] DEBUG Already up to date.
2024-06-25 00:44:24,539 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head'
2024-06-25 00:44:25,068 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-06-25 00:44:25,068 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD
2024-06-25 00:44:25,073 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head'
2024-06-25 00:44:26,022 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-06-25 00:44:26,022 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD
2024-06-25 00:44:26,029 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head'
2024-06-25 00:44:26,583 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-06-25 00:44:26,583 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD
2024-06-25 00:44:26,588 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head'
2024-06-25 00:44:26,920 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-06-25 00:44:26,920 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD
2024-06-25 00:44:26,925 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head'
2024-06-25 00:44:27,276 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-06-25 00:44:27,277 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD
2024-06-25 00:44:27,282 [ scc.git] DEBUG ## Unique users: []
2024-06-25 00:44:27,283 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:44:27,283 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:27,289 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-06-25 00:44:27,297 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:27,304 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-06-25 00:44:27,350 [ scc.git] DEBUG Auto-merging src/model/image_info.js
2024-06-25 00:44:27,351 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-25 00:44:27,355 [ scc.git] DEBUG src/model/image_info.js | 7 ++++---
2024-06-25 00:44:27,355 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++-
2024-06-25 00:44:27,355 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-)
2024-06-25 00:44:27,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:44:27,526 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd'
2024-06-25 00:44:27,535 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:27,542 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd'
2024-06-25 00:44:27,666 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py
2024-06-25 00:44:27,666 [ scc.git] DEBUG Auto-merging src/app/context.js
2024-06-25 00:44:27,666 [ scc.git] DEBUG Auto-merging src/utils/constants.js
2024-06-25 00:44:27,666 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js
2024-06-25 00:44:27,666 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-25 00:44:27,671 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++-
2024-06-25 00:44:27,671 [ scc.git] DEBUG src/app/context.js | 6 +-
2024-06-25 00:44:27,671 [ scc.git] DEBUG src/app/header.html | 5 +
2024-06-25 00:44:27,671 [ scc.git] DEBUG src/app/header.js | 45 ++++++++-
2024-06-25 00:44:27,671 [ scc.git] DEBUG src/utils/constants.js | 6 ++
2024-06-25 00:44:27,672 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++
2024-06-25 00:44:27,672 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-)
2024-06-25 00:44:27,672 [ scc.git] DEBUG create mode 100644 src/utils/figure.js
2024-06-25 00:44:27,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:44:27,941 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9'
2024-06-25 00:44:27,948 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:27,953 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9'
2024-06-25 00:44:28,006 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js
2024-06-25 00:44:28,007 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-25 00:44:28,010 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +-
2024-06-25 00:44:28,010 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++
2024-06-25 00:44:28,010 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-)
2024-06-25 00:44:28,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:44:28,346 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5'
2024-06-25 00:44:28,362 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:28,370 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5'
2024-06-25 00:44:28,405 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-25 00:44:28,415 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++--------------------
2024-06-25 00:44:28,415 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-)
2024-06-25 00:44:28,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:44:28,773 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11'
2024-06-25 00:44:28,794 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:28,800 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11'
2024-06-25 00:44:28,889 [ scc.git] DEBUG Auto-merging package-lock.json
2024-06-25 00:44:28,890 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-25 00:44:29,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:44:29,195 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-25 00:44:29,239 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:44:29,239 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:29,246 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-25 00:44:29,288 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-25 00:44:29,299 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4364ca4940> has no local changes
2024-06-25 00:44:29,299 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-iviewer
Excluded PRs:
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Already up to date.
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 477 dependabot[bot] 'Bump ws and socket.io'
- PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5'
Generated by OMERO-plugins-push#107 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/)'
2024-06-25 00:44:29,324 [ scc.git] DEBUG [detached HEAD 6097334] merge master -Dorg -Ssuccess-only
2024-06-25 00:44:29,324 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:44:29,325 [ scc.repo] DEBUG ## PRs found:
2024-06-25 00:44:29,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2024-06-25 00:44:30,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2024-06-25 00:44:30,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2024-06-25 00:44:31,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-06-25 00:44:31,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-25 00:44:32,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-25 00:44:32,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-06-25 00:44:33,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2024-06-25 00:44:33,221 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2024-06-25 00:44:33,222 [ scc.repo] DEBUG ## Branches found:
2024-06-25 00:44:33,222 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-06-25 00:44:33,222 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:44:33,222 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:33,231 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-25 00:44:33,239 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-25 00:44:33,239 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-25 00:44:33,248 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-25 00:44:33,259 [ scc.git] DEBUG Already up to date.
2024-06-25 00:44:33,259 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2024-06-25 00:44:33,706 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2024-06-25 00:44:33,707 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2024-06-25 00:44:33,714 [ scc.git] DEBUG ## Unique users: []
2024-06-25 00:44:33,715 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:44:33,715 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:33,724 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-06-25 00:44:33,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:33,741 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-06-25 00:44:33,756 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-25 00:44:33,759 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2024-06-25 00:44:33,760 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2024-06-25 00:44:33,760 [ scc.git] DEBUG requirements.txt | 2 +-
2024-06-25 00:44:33,760 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2024-06-25 00:44:33,760 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2024-06-25 00:44:33,760 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2024-06-25 00:44:33,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:44:33,924 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-25 00:44:33,969 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:44:33,969 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:33,975 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-25 00:44:34,017 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-25 00:44:34,024 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4364459bb0> has no local changes
2024-06-25 00:44:34,024 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
Generated by OMERO-plugins-push#107 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/)'
2024-06-25 00:44:34,033 [ scc.git] DEBUG [detached HEAD eec02ef] merge master -Dorg -Ssuccess-only
2024-06-25 00:44:34,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:44:34,033 [ scc.repo] DEBUG ## PRs found:
2024-06-25 00:44:34,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2024-06-25 00:44:34,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2024-06-25 00:44:35,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2024-06-25 00:44:36,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-06-25 00:44:36,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-25 00:44:37,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-06-25 00:44:37,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2024-06-25 00:44:37,451 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-06-25 00:44:37,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2024-06-25 00:44:38,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2024-06-25 00:44:38,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-06-25 00:44:39,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-25 00:44:39,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-06-25 00:44:40,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2024-06-25 00:44:40,410 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-06-25 00:44:40,410 [ scc.repo] DEBUG ## Branches found:
2024-06-25 00:44:40,410 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-06-25 00:44:40,410 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:44:40,410 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:40,416 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-25 00:44:40,422 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-25 00:44:40,422 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-25 00:44:40,429 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-25 00:44:40,435 [ scc.git] DEBUG Already up to date.
2024-06-25 00:44:40,436 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2024-06-25 00:44:40,945 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-06-25 00:44:40,945 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2024-06-25 00:44:40,952 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2024-06-25 00:44:41,446 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-06-25 00:44:41,446 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2024-06-25 00:44:41,454 [ scc.git] DEBUG ## Unique users: []
2024-06-25 00:44:41,455 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:44:41,455 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:41,464 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-06-25 00:44:41,474 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:41,482 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-06-25 00:44:41,562 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2024-06-25 00:44:41,562 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2024-06-25 00:44:41,562 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-06-25 00:44:41,562 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-06-25 00:44:41,562 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-06-25 00:44:41,563 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-06-25 00:44:41,569 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-06-25 00:44:41,577 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging
2024-06-25 00:44:41,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:44:41,783 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-06-25 00:44:41,790 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-06-25 00:44:41,796 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#107](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/cli.py
- src/omero_metadata/populate.py
--conflicts
2024-06-25 00:44:41,801 [ scc.config] DEBUG Found github.token
2024-06-25 00:44:41,802 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2024-06-25 00:44:41,802 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2024-06-25 00:44:41,808 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:41,814 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2024-06-25 00:44:41,857 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-06-25 00:44:41,857 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-06-25 00:44:41,857 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2024-06-25 00:44:41,857 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-06-25 00:44:41,857 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-06-25 00:44:41,865 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-06-25 00:44:41,875 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging
2024-06-25 00:44:42,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:44:42,187 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7'
2024-06-25 00:44:42,195 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-06-25 00:44:42,203 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#107](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2024-06-25 00:44:42,209 [ scc.config] DEBUG Found github.token
2024-06-25 00:44:42,209 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2024-06-25 00:44:42,209 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-25 00:44:42,252 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:44:42,252 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:42,257 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-25 00:44:42,300 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-25 00:44:42,308 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4364c96f40> has no local changes
2024-06-25 00:44:42,309 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Already up to date.
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#107 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/)'
2024-06-25 00:44:42,319 [ scc.git] DEBUG [detached HEAD f859a26] merge master -Dorg -Ssuccess-only
2024-06-25 00:44:42,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:44:42,320 [ scc.repo] DEBUG ## PRs found:
2024-06-25 00:44:42,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2024-06-25 00:44:43,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None
2024-06-25 00:44:43,226 [ scc.repo] DEBUG # ... Include label: dependencies
2024-06-25 00:44:43,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None
2024-06-25 00:44:44,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-25 00:44:44,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-25 00:44:45,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None
2024-06-25 00:44:45,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2
2024-06-25 00:44:45,795 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
2024-06-25 00:44:46,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None
2024-06-25 00:44:46,269 [ scc.repo] DEBUG # ... Include label: dependencies
2024-06-25 00:44:46,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None
2024-06-25 00:44:47,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-25 00:44:47,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-25 00:44:48,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None
2024-06-25 00:44:48,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2
2024-06-25 00:44:48,824 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
2024-06-25 00:44:49,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None
2024-06-25 00:44:49,291 [ scc.repo] DEBUG # ... Include label: dependencies
2024-06-25 00:44:49,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None
2024-06-25 00:44:50,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-25 00:44:50,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-25 00:44:51,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None
2024-06-25 00:44:51,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2
2024-06-25 00:44:51,876 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
2024-06-25 00:44:52,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2024-06-25 00:44:52,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2024-06-25 00:44:53,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2024-06-25 00:44:53,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2024-06-25 00:44:54,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2024-06-25 00:44:54,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2024-06-25 00:44:54,702 [ scc.repo] DEBUG ## Branches found:
2024-06-25 00:44:54,702 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-06-25 00:44:54,702 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:44:54,702 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:54,708 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-25 00:44:54,714 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-25 00:44:54,714 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-25 00:44:54,720 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-25 00:44:54,726 [ scc.git] DEBUG Already up to date.
2024-06-25 00:44:54,727 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head'
2024-06-25 00:44:55,173 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2024-06-25 00:44:55,173 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD
2024-06-25 00:44:55,177 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head'
2024-06-25 00:44:55,538 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2024-06-25 00:44:55,539 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD
2024-06-25 00:44:55,543 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head'
2024-06-25 00:44:55,917 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2024-06-25 00:44:55,917 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD
2024-06-25 00:44:55,923 [ scc.git] DEBUG ## Unique users: []
2024-06-25 00:44:55,923 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:44:55,924 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:55,930 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680'
2024-06-25 00:44:55,936 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:55,941 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680'
2024-06-25 00:44:55,952 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-25 00:44:55,955 [ scc.git] DEBUG package-lock.json | 12 ++++++++----
2024-06-25 00:44:55,955 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-)
2024-06-25 00:44:56,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:44:56,122 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec'
2024-06-25 00:44:56,131 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:56,137 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec'
2024-06-25 00:44:56,186 [ scc.git] DEBUG Auto-merging package-lock.json
2024-06-25 00:44:56,186 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-25 00:44:56,190 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++---------------------------
2024-06-25 00:44:56,190 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-)
2024-06-25 00:44:56,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:44:56,545 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f'
2024-06-25 00:44:56,552 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:56,558 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f'
2024-06-25 00:44:56,587 [ scc.git] DEBUG Auto-merging package-lock.json
2024-06-25 00:44:56,587 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-25 00:44:56,591 [ scc.git] DEBUG package-lock.json | 8 ++++----
2024-06-25 00:44:56,591 [ scc.git] DEBUG package.json | 2 +-
2024-06-25 00:44:56,591 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-)
2024-06-25 00:44:56,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:44:56,980 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-25 00:44:57,024 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:44:57,024 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:57,030 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-25 00:44:57,078 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-25 00:44:57,086 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4364411640> has no local changes
2024-06-25 00:44:57,087 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
- PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
- PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
Generated by OMERO-plugins-push#107 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/)'
2024-06-25 00:44:57,097 [ scc.git] DEBUG [detached HEAD b4ce859] merge master -Dorg -Ssuccess-only
2024-06-25 00:44:57,097 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:44:57,097 [ scc.repo] DEBUG ## PRs found:
2024-06-25 00:44:57,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None
2024-06-25 00:44:57,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None
2024-06-25 00:44:58,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-06-25 00:44:58,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-25 00:44:59,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-06-25 00:44:59,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2
2024-06-25 00:44:59,778 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel'
2024-06-25 00:44:59,778 [ scc.repo] DEBUG ## Branches found:
2024-06-25 00:44:59,778 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-06-25 00:44:59,778 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:44:59,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:44:59,785 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-25 00:44:59,791 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-25 00:44:59,791 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-25 00:44:59,796 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-25 00:44:59,801 [ scc.git] DEBUG Already up to date.
2024-06-25 00:44:59,801 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-06-25 00:45:00,181 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools
2024-06-25 00:45:00,181 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2024-06-25 00:45:00,185 [ scc.git] DEBUG ## Unique users: []
2024-06-25 00:45:00,186 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:00,186 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:00,191 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-06-25 00:45:00,196 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:00,201 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-06-25 00:45:00,211 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-25 00:45:00,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:00,379 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-25 00:45:00,422 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:00,422 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:00,428 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-25 00:45:00,469 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-25 00:45:00,476 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4364c97be0> has no local changes
2024-06-25 00:45:00,477 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 14 jburel 'use conda-forge channel'
Generated by OMERO-plugins-push#107 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/)'
2024-06-25 00:45:00,487 [ scc.git] DEBUG [detached HEAD a0b10ae] merge master -Dorg -Ssuccess-only
2024-06-25 00:45:00,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:00,487 [ scc.repo] DEBUG ## PRs found:
2024-06-25 00:45:00,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2024-06-25 00:45:01,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None
2024-06-25 00:45:01,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None
2024-06-25 00:45:02,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None
2024-06-25 00:45:02,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-06-25 00:45:03,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-25 00:45:03,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-06-25 00:45:04,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2
2024-06-25 00:45:04,396 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-06-25 00:45:04,396 [ scc.repo] DEBUG ## Branches found:
2024-06-25 00:45:04,396 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-06-25 00:45:04,396 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:04,396 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:04,402 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-25 00:45:04,407 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-25 00:45:04,407 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-25 00:45:04,412 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-25 00:45:04,418 [ scc.git] DEBUG Already up to date.
2024-06-25 00:45:04,419 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head'
2024-06-25 00:45:04,851 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2024-06-25 00:45:04,851 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD
2024-06-25 00:45:04,856 [ scc.git] DEBUG ## Unique users: []
2024-06-25 00:45:04,856 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:04,857 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:04,864 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61'
2024-06-25 00:45:04,872 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:04,877 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61'
2024-06-25 00:45:04,886 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py
2024-06-25 00:45:04,887 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-25 00:45:04,889 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++
2024-06-25 00:45:04,889 [ scc.git] DEBUG 1 file changed, 33 insertions(+)
2024-06-25 00:45:05,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:05,052 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-25 00:45:05,096 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:05,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:05,101 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-25 00:45:05,143 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-25 00:45:05,150 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f43643c9550> has no local changes
2024-06-25 00:45:05,150 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 6 dominikl 'Add method to create masks grouped by label id'
Generated by OMERO-plugins-push#107 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/)'
2024-06-25 00:45:05,160 [ scc.git] DEBUG [detached HEAD 83bed5e] merge master -Dorg -Ssuccess-only
2024-06-25 00:45:05,161 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:05,161 [ scc.repo] DEBUG ## PRs found:
2024-06-25 00:45:05,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2024-06-25 00:45:06,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2024-06-25 00:45:06,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2024-06-25 00:45:07,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-06-25 00:45:07,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-25 00:45:08,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-06-25 00:45:08,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2024-06-25 00:45:08,618 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2024-06-25 00:45:08,618 [ scc.repo] DEBUG ## Branches found:
2024-06-25 00:45:08,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-06-25 00:45:08,618 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:08,618 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:08,623 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-25 00:45:08,628 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-25 00:45:08,628 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-25 00:45:08,633 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-25 00:45:08,639 [ scc.git] DEBUG Already up to date.
2024-06-25 00:45:08,640 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-06-25 00:45:09,054 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2024-06-25 00:45:09,054 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2024-06-25 00:45:09,058 [ scc.git] DEBUG ## Unique users: []
2024-06-25 00:45:09,058 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:09,058 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:09,064 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-06-25 00:45:09,069 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:09,074 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-06-25 00:45:09,104 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2024-06-25 00:45:09,105 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2024-06-25 00:45:09,105 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2024-06-25 00:45:09,105 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2024-06-25 00:45:09,105 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2024-06-25 00:45:09,105 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2024-06-25 00:45:09,105 [ scc.git] DEBUG Auto-merging setup.py
2024-06-25 00:45:09,105 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-06-25 00:45:09,105 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2024-06-25 00:45:09,106 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-06-25 00:45:09,112 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319'
2024-06-25 00:45:09,120 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0
2024-06-25 00:45:09,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:09,284 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-06-25 00:45:09,291 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319'
2024-06-25 00:45:09,297 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#107](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_signup/views.py
- omero_signup/signup_settings.py
- omero_signup/urls.py
- setup.py
--conflicts
2024-06-25 00:45:09,302 [ scc.config] DEBUG Found github.token
2024-06-25 00:45:09,302 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2024-06-25 00:45:09,302 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-25 00:45:09,340 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:09,340 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:09,345 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-25 00:45:09,390 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-25 00:45:09,397 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4364473f40> has no local changes
2024-06-25 00:45:09,397 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#107 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/)'
2024-06-25 00:45:09,407 [ scc.git] DEBUG [detached HEAD 6b0b4df] merge master -Dorg -Ssuccess-only
2024-06-25 00:45:09,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:09,408 [ scc.repo] DEBUG ## PRs found:
2024-06-25 00:45:09,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2024-06-25 00:45:10,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2024-06-25 00:45:10,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2024-06-25 00:45:11,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-06-25 00:45:11,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-25 00:45:12,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-06-25 00:45:12,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2024-06-25 00:45:12,874 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-06-25 00:45:12,874 [ scc.repo] DEBUG ## Branches found:
2024-06-25 00:45:12,874 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-06-25 00:45:12,874 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:12,874 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:12,881 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-25 00:45:12,885 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-25 00:45:12,886 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-25 00:45:12,891 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-25 00:45:12,896 [ scc.git] DEBUG Already up to date.
2024-06-25 00:45:12,896 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2024-06-25 00:45:13,309 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2024-06-25 00:45:13,310 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD
2024-06-25 00:45:13,314 [ scc.git] DEBUG ## Unique users: []
2024-06-25 00:45:13,314 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:13,314 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:13,320 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2024-06-25 00:45:13,327 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:13,331 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2024-06-25 00:45:13,347 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-25 00:45:13,350 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++
2024-06-25 00:45:13,350 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++
2024-06-25 00:45:13,350 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++
2024-06-25 00:45:13,350 [ scc.git] DEBUG idr/70-reset-password.sh | 1 +
2024-06-25 00:45:13,350 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 +
2024-06-25 00:45:13,350 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 +
2024-06-25 00:45:13,350 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++
2024-06-25 00:45:13,350 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++
2024-06-25 00:45:13,350 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++
2024-06-25 00:45:13,350 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2024-06-25 00:45:13,350 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++
2024-06-25 00:45:13,352 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++
2024-06-25 00:45:13,353 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++
2024-06-25 00:45:13,353 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++
2024-06-25 00:45:13,353 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++
2024-06-25 00:45:13,353 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++
2024-06-25 00:45:13,353 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++
2024-06-25 00:45:13,353 [ scc.git] DEBUG idr/omero/Dockerfile | 3 +
2024-06-25 00:45:13,353 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++
2024-06-25 00:45:13,353 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++
2024-06-25 00:45:13,353 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++
2024-06-25 00:45:13,353 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++
2024-06-25 00:45:13,353 [ scc.git] DEBUG 22 files changed, 824 insertions(+)
2024-06-25 00:45:13,353 [ scc.git] DEBUG create mode 100644 idr-compose.yml
2024-06-25 00:45:13,353 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml
2024-06-25 00:45:13,353 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh
2024-06-25 00:45:13,353 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh
2024-06-25 00:45:13,353 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf
2024-06-25 00:45:13,353 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf
2024-06-25 00:45:13,353 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2024-06-25 00:45:13,353 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2024-06-25 00:45:13,353 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf
2024-06-25 00:45:13,353 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2024-06-25 00:45:13,353 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2024-06-25 00:45:13,353 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2024-06-25 00:45:13,353 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2024-06-25 00:45:13,353 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2024-06-25 00:45:13,353 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2024-06-25 00:45:13,353 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2024-06-25 00:45:13,353 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf
2024-06-25 00:45:13,353 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile
2024-06-25 00:45:13,353 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml
2024-06-25 00:45:13,353 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile
2024-06-25 00:45:13,354 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile
2024-06-25 00:45:13,354 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml
2024-06-25 00:45:13,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:13,502 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-25 00:45:13,543 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:13,544 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:13,550 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-25 00:45:13,589 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-25 00:45:13,596 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f43643c9730> has no local changes
2024-06-25 00:45:13,596 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
Generated by OMERO-plugins-push#107 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/)'
2024-06-25 00:45:13,606 [ scc.git] DEBUG [detached HEAD c60170f] merge master -Dorg -Ssuccess-only
2024-06-25 00:45:13,607 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:13,607 [ scc.repo] DEBUG ## PRs found:
2024-06-25 00:45:13,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2
2024-06-25 00:45:13,918 [ scc.repo] DEBUG ## Branches found:
2024-06-25 00:45:13,918 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-06-25 00:45:13,918 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:13,918 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:13,924 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-25 00:45:13,929 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-25 00:45:13,929 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-25 00:45:13,934 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-25 00:45:13,939 [ scc.git] DEBUG Already up to date.
2024-06-25 00:45:13,939 [ scc.git] DEBUG ## Unique users: []
2024-06-25 00:45:13,939 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:13,939 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:13,943 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-25 00:45:13,981 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:13,981 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:13,986 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-25 00:45:14,022 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-25 00:45:14,029 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f43643dab80> has no local changes
2024-06-25 00:45:14,029 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Already up to date.
Generated by OMERO-plugins-push#107 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/)'
2024-06-25 00:45:14,037 [ scc.git] DEBUG [detached HEAD 35adb1d] merge master -Dorg -Ssuccess-only
2024-06-25 00:45:14,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:14,037 [ scc.repo] DEBUG ## PRs found:
2024-06-25 00:45:14,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2
2024-06-25 00:45:14,347 [ scc.repo] DEBUG ## Branches found:
2024-06-25 00:45:14,348 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-06-25 00:45:14,348 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:14,348 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:14,357 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-25 00:45:14,363 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-25 00:45:14,363 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-25 00:45:14,369 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-25 00:45:14,375 [ scc.git] DEBUG Already up to date.
2024-06-25 00:45:14,376 [ scc.git] DEBUG ## Unique users: []
2024-06-25 00:45:14,376 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:14,376 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:14,381 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-25 00:45:14,421 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:14,421 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:14,427 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-25 00:45:14,464 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-25 00:45:14,471 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4364434d90> has no local changes
2024-06-25 00:45:14,471 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Already up to date.
Generated by OMERO-plugins-push#107 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/)'
2024-06-25 00:45:14,480 [ scc.git] DEBUG [detached HEAD a8df6eb] merge master -Dorg -Ssuccess-only
2024-06-25 00:45:14,480 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:14,481 [ scc.git] INFO Overriding base-branch from master to main
2024-06-25 00:45:14,481 [ scc.repo] DEBUG ## PRs found:
2024-06-25 00:45:14,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2024-06-25 00:45:15,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2024-06-25 00:45:15,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2024-06-25 00:45:16,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2024-06-25 00:45:16,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-06-25 00:45:17,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-25 00:45:17,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-25 00:45:18,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-06-25 00:45:18,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2024-06-25 00:45:18,761 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-06-25 00:45:18,761 [ scc.repo] DEBUG ## Branches found:
2024-06-25 00:45:18,761 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-06-25 00:45:18,761 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:18,761 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:18,768 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2024-06-25 00:45:18,772 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-25 00:45:18,773 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2024-06-25 00:45:18,778 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2024-06-25 00:45:18,783 [ scc.git] DEBUG Already up to date.
2024-06-25 00:45:18,783 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2024-06-25 00:45:19,206 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2024-06-25 00:45:19,207 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2024-06-25 00:45:19,211 [ scc.git] DEBUG ## Unique users: []
2024-06-25 00:45:19,211 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:19,211 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:19,217 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-06-25 00:45:19,223 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:19,228 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-06-25 00:45:19,250 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2024-06-25 00:45:19,251 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2024-06-25 00:45:19,251 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-06-25 00:45:19,251 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-06-25 00:45:19,257 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-06-25 00:45:19,263 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0
2024-06-25 00:45:19,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:19,435 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-06-25 00:45:19,442 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-06-25 00:45:19,447 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#107](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2024-06-25 00:45:19,452 [ scc.config] DEBUG Found github.token
2024-06-25 00:45:19,452 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2024-06-25 00:45:19,452 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-25 00:45:19,491 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:19,491 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:19,496 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-25 00:45:19,536 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-25 00:45:19,542 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4364430ee0> has no local changes
2024-06-25 00:45:19,542 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#107 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/)'
2024-06-25 00:45:19,550 [ scc.git] DEBUG [detached HEAD a783a08] merge master -Dorg -Ssuccess-only
2024-06-25 00:45:19,551 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:19,551 [ scc.repo] DEBUG ## PRs found:
2024-06-25 00:45:19,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2
2024-06-25 00:45:19,866 [ scc.repo] DEBUG ## Branches found:
2024-06-25 00:45:19,866 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-06-25 00:45:19,866 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:19,866 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:19,872 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-25 00:45:19,877 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-25 00:45:19,877 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-25 00:45:19,882 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-25 00:45:19,887 [ scc.git] DEBUG Already up to date.
2024-06-25 00:45:19,888 [ scc.git] DEBUG ## Unique users: []
2024-06-25 00:45:19,888 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:19,888 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:19,892 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-25 00:45:19,929 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:19,930 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:19,935 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-25 00:45:19,973 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-25 00:45:19,981 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f43643cfe80> has no local changes
2024-06-25 00:45:19,981 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Already up to date.
Generated by OMERO-plugins-push#107 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/)'
2024-06-25 00:45:19,989 [ scc.git] DEBUG [detached HEAD 2d2fb9a] merge master -Dorg -Ssuccess-only
2024-06-25 00:45:19,990 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:19,990 [ scc.repo] DEBUG ## PRs found:
2024-06-25 00:45:20,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2
2024-06-25 00:45:20,301 [ scc.repo] DEBUG ## Branches found:
2024-06-25 00:45:20,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-06-25 00:45:20,301 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:20,301 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:20,307 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-25 00:45:20,312 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-25 00:45:20,312 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-25 00:45:20,318 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-25 00:45:20,325 [ scc.git] DEBUG Already up to date.
2024-06-25 00:45:20,325 [ scc.git] DEBUG ## Unique users: []
2024-06-25 00:45:20,325 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:20,325 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:20,330 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-25 00:45:20,369 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:20,369 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:20,374 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-25 00:45:20,411 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-25 00:45:20,418 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4364345400> has no local changes
2024-06-25 00:45:20,418 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Already up to date.
Generated by OMERO-plugins-push#107 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/)'
2024-06-25 00:45:20,427 [ scc.git] DEBUG [detached HEAD 9a9461e] merge master -Dorg -Ssuccess-only
2024-06-25 00:45:20,427 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:20,428 [ scc.repo] DEBUG ## PRs found:
2024-06-25 00:45:20,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2024-06-25 00:45:21,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2024-06-25 00:45:21,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2024-06-25 00:45:22,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-06-25 00:45:22,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-25 00:45:23,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-06-25 00:45:23,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2024-06-25 00:45:23,679 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2024-06-25 00:45:23,679 [ scc.repo] DEBUG ## Branches found:
2024-06-25 00:45:23,679 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-06-25 00:45:23,679 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:23,679 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:23,686 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-25 00:45:23,692 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-25 00:45:23,692 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-25 00:45:23,699 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-25 00:45:23,706 [ scc.git] DEBUG Already up to date.
2024-06-25 00:45:23,706 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2024-06-25 00:45:24,127 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2024-06-25 00:45:24,127 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2024-06-25 00:45:24,132 [ scc.git] DEBUG ## Unique users: []
2024-06-25 00:45:24,132 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:24,133 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:24,139 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-06-25 00:45:24,144 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:24,149 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-06-25 00:45:24,181 [ scc.git] DEBUG Auto-merging Dockerfile
2024-06-25 00:45:24,181 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2024-06-25 00:45:24,181 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-06-25 00:45:24,182 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-06-25 00:45:24,188 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-06-25 00:45:24,195 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2024-06-25 00:45:24,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:24,411 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-06-25 00:45:24,418 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-06-25 00:45:24,423 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#107](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2024-06-25 00:45:24,427 [ scc.config] DEBUG Found github.token
2024-06-25 00:45:24,427 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2024-06-25 00:45:24,427 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-25 00:45:24,466 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:24,467 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:24,472 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-25 00:45:24,508 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-25 00:45:24,515 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f436438bb80> has no local changes
2024-06-25 00:45:24,515 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#107 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/)'
2024-06-25 00:45:24,523 [ scc.git] DEBUG [detached HEAD f5fda9f] merge master -Dorg -Ssuccess-only
2024-06-25 00:45:24,524 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:24,524 [ scc.git] INFO Overriding base-branch from master to develop
2024-06-25 00:45:24,524 [ scc.repo] DEBUG ## PRs found:
2024-06-25 00:45:25,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-06-25 00:45:25,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-06-25 00:45:26,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-06-25 00:45:26,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-06-25 00:45:27,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-06-25 00:45:27,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-06-25 00:45:27,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-06-25 00:45:28,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-06-25 00:45:28,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-25 00:45:29,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-06-25 00:45:29,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-06-25 00:45:29,739 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-06-25 00:45:30,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-06-25 00:45:30,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-06-25 00:45:31,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-06-25 00:45:31,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-06-25 00:45:31,704 [ scc.repo] DEBUG ## Branches found:
2024-06-25 00:45:31,704 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-06-25 00:45:31,704 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:31,704 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:31,710 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-06-25 00:45:31,716 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-25 00:45:31,716 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-06-25 00:45:31,722 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-06-25 00:45:31,729 [ scc.git] DEBUG Already up to date.
2024-06-25 00:45:31,729 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-06-25 00:45:32,228 [ scc.git] DEBUG From https://github.com/ome/scripts
2024-06-25 00:45:32,228 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-06-25 00:45:32,233 [ scc.git] DEBUG ## Unique users: []
2024-06-25 00:45:32,233 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:32,233 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:32,239 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-06-25 00:45:32,246 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:32,251 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-06-25 00:45:32,304 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-06-25 00:45:32,304 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-06-25 00:45:32,304 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-06-25 00:45:32,304 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-06-25 00:45:32,311 [ scc.git] DEBUG Calling 'git reset --hard c20d2734b711c659cecea83db6e2ebd7b7013636'
2024-06-25 00:45:32,318 [ scc.git] DEBUG HEAD is now at c20d273 Merge pull request #221 from imcf/fix-typechecking
2024-06-25 00:45:32,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:32,487 [ scc.git] DEBUG Calling 'git merge-base c20d2734b711c659cecea83db6e2ebd7b7013636 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-06-25 00:45:32,495 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..c20d2734b711c659cecea83db6e2ebd7b7013636'
2024-06-25 00:45:32,501 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#107](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-06-25 00:45:32,505 [ scc.config] DEBUG Found github.token
2024-06-25 00:45:32,506 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-06-25 00:45:32,506 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-25 00:45:32,547 [ scc.git] DEBUG Get sha1 of %s
2024-06-25 00:45:32,548 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-25 00:45:32,553 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-25 00:45:32,593 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-25 00:45:32,600 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f43643b1c70> has no local changes
2024-06-25 00:45:32,600 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#107 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/)'
2024-06-25 00:45:32,609 [ scc.git] DEBUG [detached HEAD 8323417] merge master -Dorg -Ssuccess-only
2024-06-25 00:45:32,610 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:32,610 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-25 00:45:32,686 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2024-06-25 00:45:32,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:32,909 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2024-06-25 00:45:32,914 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2024-06-25 00:45:33,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:33,305 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2024-06-25 00:45:33,309 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2024-06-25 00:45:33,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:33,733 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2024-06-25 00:45:33,737 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2024-06-25 00:45:34,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:34,165 [ scc.config] DEBUG Found submodule.omero-figure.url
2024-06-25 00:45:34,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:34,579 [ scc.config] DEBUG Found submodule.omero-figure.branch
2024-06-25 00:45:34,583 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2024-06-25 00:45:34,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:34,997 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2024-06-25 00:45:35,002 [ scc.config] DEBUG Found submodule.omero-gallery.url
2024-06-25 00:45:35,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:35,413 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2024-06-25 00:45:35,419 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2024-06-25 00:45:35,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:35,815 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2024-06-25 00:45:35,820 [ scc.config] DEBUG Found submodule.omero-mapr.url
2024-06-25 00:45:36,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:36,227 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2024-06-25 00:45:36,232 [ scc.config] DEBUG Found submodule.omero-metadata.url
2024-06-25 00:45:36,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:36,637 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2024-06-25 00:45:36,642 [ scc.config] DEBUG Found submodule.omero-parade.url
2024-06-25 00:45:37,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:37,047 [ scc.config] DEBUG Found submodule.omero-parade.branch
2024-06-25 00:45:37,051 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2024-06-25 00:45:37,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:37,457 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2024-06-25 00:45:37,463 [ scc.config] DEBUG Found submodule.omero-rois.url
2024-06-25 00:45:37,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:37,874 [ scc.config] DEBUG Found submodule.omero-signup.url
2024-06-25 00:45:38,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:38,275 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2024-06-25 00:45:38,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:38,684 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2024-06-25 00:45:38,689 [ scc.config] DEBUG Found submodule.omero-upload.url
2024-06-25 00:45:39,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:39,110 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2024-06-25 00:45:39,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:39,544 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2024-06-25 00:45:39,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:39,958 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2024-06-25 00:45:39,964 [ scc.config] DEBUG Found submodule.omero-weberror.url
2024-06-25 00:45:40,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:40,376 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2024-06-25 00:45:40,382 [ scc.config] DEBUG Found submodule.omero-webtest.url
2024-06-25 00:45:40,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:40,775 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2024-06-25 00:45:40,784 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2024-06-25 00:45:41,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:41,177 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2024-06-25 00:45:41,182 [ scc.config] DEBUG Found submodule.scripts.url
2024-06-25 00:45:41,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-25 00:45:41,593 [ scc.config] DEBUG Found submodule.scripts.branch
2024-06-25 00:45:41,593 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-25 00:45:41,670 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4365ffa160> has local changes
2024-06-25 00:45:41,671 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`'
Repository: ome/minimal-omero-client
Already up to date.
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Merged PRs:
- PR 25 jburel 'review message'
Repository: ome/omero-cli-render
Excluded PRs:
- PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
- PR 54 dominikl 'Change rendering settings spec' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
- PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 63 sbesson 'Remove python-future dependency'
- PR 64 sbesson 'Fix thumbnail generation with missing rendering definition'
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft)
Already up to date.
Merged PRs:
- PR 147 will-moore 'Name option'
Conflicting PRs (not included):
- PR 102 will-moore 'Zarr export tests'
- PR 123 will-moore 'Support export of Fileset:ID'
Repository: ome/omero-figure
Excluded PRs:
- PR 560 will-moore 'Max projection bytes' (exclude comment)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Already up to date.
Merged PRs:
- PR 549 will-moore 'Inset feature'
- PR 555 will-moore 'Points in shape editor'
- PR 568 will-moore 'Remove numpy from tests_require in setup.py'
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Already up to date.
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 477 dependabot[bot] 'Bump ws and socket.io'
- PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
Repository: ome/omero-metadata
Already up to date.
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
- PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
- PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 14 jburel 'use conda-forge channel'
Repository: ome/omero-rois
Excluded PRs:
- PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 6 dominikl 'Add method to create masks grouped by label id'
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
Repository: ome/omero-upload
Already up to date.
Repository: ome/omero-virtual-microscope
Already up to date.
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Already up to date.
Repository: openmicroscopy/omero-webtest
Already up to date.
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#107 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/107/)'
2024-06-25 00:45:41,684 [ scc.git] DEBUG [detached HEAD 263a04e] merge master -Dorg -Ssuccess-only
2024-06-25 00:45:41,684 [ scc.merge] INFO Repository: ome/omero-plugins
2024-06-25 00:45:41,684 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2024-06-25 00:45:41,685 [ scc.merge] INFO Already up to date.
2024-06-25 00:45:41,685 [ scc.merge] INFO
2024-06-25 00:45:41,685 [ scc.merge] INFO Merged PRs:
2024-06-25 00:45:41,685 [ scc.merge] INFO - PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`'
2024-06-25 00:45:41,685 [ scc.merge] INFO
2024-06-25 00:45:41,685 [ scc.merge] INFO Repository: ome/minimal-omero-client
2024-06-25 00:45:41,685 [ scc.merge] INFO Already up to date.
2024-06-25 00:45:41,685 [ scc.merge] INFO
2024-06-25 00:45:41,685 [ scc.merge] INFO
2024-06-25 00:45:41,685 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2024-06-25 00:45:41,685 [ scc.merge] INFO Excluded PRs:
2024-06-25 00:45:41,685 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2024-06-25 00:45:41,685 [ scc.merge] INFO Already up to date.
2024-06-25 00:45:41,685 [ scc.merge] INFO
2024-06-25 00:45:41,685 [ scc.merge] INFO Merged PRs:
2024-06-25 00:45:41,685 [ scc.merge] INFO - PR 25 jburel 'review message'
2024-06-25 00:45:41,685 [ scc.merge] INFO
2024-06-25 00:45:41,685 [ scc.merge] INFO Repository: ome/omero-cli-render
2024-06-25 00:45:41,685 [ scc.merge] INFO Excluded PRs:
2024-06-25 00:45:41,685 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
2024-06-25 00:45:41,685 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft)
2024-06-25 00:45:41,685 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2024-06-25 00:45:41,685 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft)
2024-06-25 00:45:41,685 [ scc.merge] INFO Already up to date.
2024-06-25 00:45:41,685 [ scc.merge] INFO
2024-06-25 00:45:41,685 [ scc.merge] INFO Merged PRs:
2024-06-25 00:45:41,685 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate'
2024-06-25 00:45:41,685 [ scc.merge] INFO - PR 63 sbesson 'Remove python-future dependency'
2024-06-25 00:45:41,685 [ scc.merge] INFO - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition'
2024-06-25 00:45:41,685 [ scc.merge] INFO
2024-06-25 00:45:41,685 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2024-06-25 00:45:41,686 [ scc.merge] INFO Excluded PRs:
2024-06-25 00:45:41,686 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-06-25 00:45:41,686 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft)
2024-06-25 00:45:41,686 [ scc.merge] INFO Already up to date.
2024-06-25 00:45:41,686 [ scc.merge] INFO
2024-06-25 00:45:41,686 [ scc.merge] INFO Merged PRs:
2024-06-25 00:45:41,686 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2024-06-25 00:45:41,686 [ scc.merge] INFO
2024-06-25 00:45:41,686 [ scc.merge] INFO Conflicting PRs (not included):
2024-06-25 00:45:41,686 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests'
2024-06-25 00:45:41,686 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID'
2024-06-25 00:45:41,686 [ scc.merge] INFO
2024-06-25 00:45:41,686 [ scc.merge] INFO Repository: ome/omero-figure
2024-06-25 00:45:41,686 [ scc.merge] INFO Excluded PRs:
2024-06-25 00:45:41,686 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes' (exclude comment)
2024-06-25 00:45:41,686 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment)
2024-06-25 00:45:41,686 [ scc.merge] INFO Already up to date.
2024-06-25 00:45:41,686 [ scc.merge] INFO
2024-06-25 00:45:41,686 [ scc.merge] INFO Merged PRs:
2024-06-25 00:45:41,686 [ scc.merge] INFO - PR 549 will-moore 'Inset feature'
2024-06-25 00:45:41,686 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor'
2024-06-25 00:45:41,686 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py'
2024-06-25 00:45:41,686 [ scc.merge] INFO
2024-06-25 00:45:41,686 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2024-06-25 00:45:41,686 [ scc.merge] INFO Already up to date.
2024-06-25 00:45:41,686 [ scc.merge] INFO
2024-06-25 00:45:41,686 [ scc.merge] INFO Merged PRs:
2024-06-25 00:45:41,686 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2024-06-25 00:45:41,686 [ scc.merge] INFO
2024-06-25 00:45:41,686 [ scc.merge] INFO Repository: ome/omero-gallery
2024-06-25 00:45:41,686 [ scc.merge] INFO Already up to date.
2024-06-25 00:45:41,686 [ scc.merge] INFO
2024-06-25 00:45:41,686 [ scc.merge] INFO Merged PRs:
2024-06-25 00:45:41,686 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'
2024-06-25 00:45:41,686 [ scc.merge] INFO
2024-06-25 00:45:41,686 [ scc.merge] INFO Repository: ome/omero-iviewer
2024-06-25 00:45:41,686 [ scc.merge] INFO Excluded PRs:
2024-06-25 00:45:41,687 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2024-06-25 00:45:41,687 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2024-06-25 00:45:41,687 [ scc.merge] INFO Already up to date.
2024-06-25 00:45:41,687 [ scc.merge] INFO
2024-06-25 00:45:41,687 [ scc.merge] INFO Merged PRs:
2024-06-25 00:45:41,687 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2024-06-25 00:45:41,687 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2024-06-25 00:45:41,687 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2024-06-25 00:45:41,687 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io'
2024-06-25 00:45:41,687 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5'
2024-06-25 00:45:41,687 [ scc.merge] INFO
2024-06-25 00:45:41,687 [ scc.merge] INFO Repository: ome/omero-mapr
2024-06-25 00:45:41,687 [ scc.merge] INFO Excluded PRs:
2024-06-25 00:45:41,687 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2024-06-25 00:45:41,687 [ scc.merge] INFO Already up to date.
2024-06-25 00:45:41,687 [ scc.merge] INFO
2024-06-25 00:45:41,687 [ scc.merge] INFO Merged PRs:
2024-06-25 00:45:41,687 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2024-06-25 00:45:41,687 [ scc.merge] INFO
2024-06-25 00:45:41,687 [ scc.merge] INFO Repository: ome/omero-metadata
2024-06-25 00:45:41,687 [ scc.merge] INFO Already up to date.
2024-06-25 00:45:41,687 [ scc.merge] INFO
2024-06-25 00:45:41,687 [ scc.merge] INFO Conflicting PRs (not included):
2024-06-25 00:45:41,687 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-06-25 00:45:41,687 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-06-25 00:45:41,687 [ scc.merge] INFO
2024-06-25 00:45:41,687 [ scc.merge] INFO Repository: ome/omero-parade
2024-06-25 00:45:41,687 [ scc.merge] INFO Excluded PRs:
2024-06-25 00:45:41,687 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2024-06-25 00:45:41,687 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2024-06-25 00:45:41,687 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2024-06-25 00:45:41,687 [ scc.merge] INFO Already up to date.
2024-06-25 00:45:41,687 [ scc.merge] INFO
2024-06-25 00:45:41,687 [ scc.merge] INFO Merged PRs:
2024-06-25 00:45:41,687 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
2024-06-25 00:45:41,687 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
2024-06-25 00:45:41,687 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
2024-06-25 00:45:41,688 [ scc.merge] INFO
2024-06-25 00:45:41,688 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2024-06-25 00:45:41,688 [ scc.merge] INFO Already up to date.
2024-06-25 00:45:41,688 [ scc.merge] INFO
2024-06-25 00:45:41,688 [ scc.merge] INFO Merged PRs:
2024-06-25 00:45:41,688 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel'
2024-06-25 00:45:41,688 [ scc.merge] INFO
2024-06-25 00:45:41,688 [ scc.merge] INFO Repository: ome/omero-rois
2024-06-25 00:45:41,688 [ scc.merge] INFO Excluded PRs:
2024-06-25 00:45:41,688 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-06-25 00:45:41,688 [ scc.merge] INFO Already up to date.
2024-06-25 00:45:41,688 [ scc.merge] INFO
2024-06-25 00:45:41,688 [ scc.merge] INFO Merged PRs:
2024-06-25 00:45:41,688 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-06-25 00:45:41,688 [ scc.merge] INFO
2024-06-25 00:45:41,688 [ scc.merge] INFO Repository: ome/omero-signup
2024-06-25 00:45:41,688 [ scc.merge] INFO Already up to date.
2024-06-25 00:45:41,688 [ scc.merge] INFO
2024-06-25 00:45:41,688 [ scc.merge] INFO Conflicting PRs (not included):
2024-06-25 00:45:41,688 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2024-06-25 00:45:41,688 [ scc.merge] INFO
2024-06-25 00:45:41,688 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2024-06-25 00:45:41,688 [ scc.merge] INFO Already up to date.
2024-06-25 00:45:41,688 [ scc.merge] INFO
2024-06-25 00:45:41,688 [ scc.merge] INFO Merged PRs:
2024-06-25 00:45:41,688 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-06-25 00:45:41,688 [ scc.merge] INFO
2024-06-25 00:45:41,688 [ scc.merge] INFO Repository: ome/omero-upload
2024-06-25 00:45:41,688 [ scc.merge] INFO Already up to date.
2024-06-25 00:45:41,688 [ scc.merge] INFO
2024-06-25 00:45:41,688 [ scc.merge] INFO
2024-06-25 00:45:41,688 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2024-06-25 00:45:41,689 [ scc.merge] INFO Already up to date.
2024-06-25 00:45:41,689 [ scc.merge] INFO
2024-06-25 00:45:41,689 [ scc.merge] INFO
2024-06-25 00:45:41,689 [ scc.merge] INFO Repository: ome/omero-web-zarr
2024-06-25 00:45:41,689 [ scc.merge] INFO Excluded PRs:
2024-06-25 00:45:41,689 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2024-06-25 00:45:41,689 [ scc.merge] INFO Already up to date.
2024-06-25 00:45:41,689 [ scc.merge] INFO
2024-06-25 00:45:41,689 [ scc.merge] INFO Conflicting PRs (not included):
2024-06-25 00:45:41,689 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-06-25 00:45:41,689 [ scc.merge] INFO
2024-06-25 00:45:41,689 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2024-06-25 00:45:41,689 [ scc.merge] INFO Already up to date.
2024-06-25 00:45:41,689 [ scc.merge] INFO
2024-06-25 00:45:41,689 [ scc.merge] INFO
2024-06-25 00:45:41,689 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2024-06-25 00:45:41,689 [ scc.merge] INFO Already up to date.
2024-06-25 00:45:41,689 [ scc.merge] INFO
2024-06-25 00:45:41,689 [ scc.merge] INFO
2024-06-25 00:45:41,689 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2024-06-25 00:45:41,689 [ scc.merge] INFO Already up to date.
2024-06-25 00:45:41,689 [ scc.merge] INFO
2024-06-25 00:45:41,689 [ scc.merge] INFO Conflicting PRs (not included):
2024-06-25 00:45:41,690 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2024-06-25 00:45:41,690 [ scc.merge] INFO
2024-06-25 00:45:41,690 [ scc.merge] INFO Repository: ome/scripts
2024-06-25 00:45:41,690 [ scc.merge] INFO Excluded PRs:
2024-06-25 00:45:41,690 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-06-25 00:45:41,690 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-06-25 00:45:41,690 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-06-25 00:45:41,690 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-06-25 00:45:41,690 [ scc.merge] INFO Already up to date.
2024-06-25 00:45:41,690 [ scc.merge] INFO
2024-06-25 00:45:41,690 [ scc.merge] INFO Conflicting PRs (not included):
2024-06-25 00:45:41,690 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-06-25 00:45:41,690 [ scc.merge] INFO
2024-06-25 00:45:41,690 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-06-25 00:45:41,690 [ scc.git] DEBUG Calling 'git remote'
2024-06-25 00:45:41,698 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2024-06-25 00:45:41,698 [ scc.git] DEBUG Calling 'git remote'
2024-06-25 00:45:41,703 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:41,704 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2024-06-25 00:45:41,704 [ scc.git] DEBUG Calling 'git remote'
2024-06-25 00:45:41,709 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:41,710 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2024-06-25 00:45:41,710 [ scc.git] DEBUG Calling 'git remote'
2024-06-25 00:45:41,714 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:41,714 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2024-06-25 00:45:41,715 [ scc.git] DEBUG Calling 'git remote'
2024-06-25 00:45:41,719 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:41,719 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2024-06-25 00:45:41,719 [ scc.git] DEBUG Calling 'git remote'
2024-06-25 00:45:41,724 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:41,724 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2024-06-25 00:45:41,724 [ scc.git] DEBUG Calling 'git remote'
2024-06-25 00:45:41,729 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:41,729 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-06-25 00:45:41,729 [ scc.git] DEBUG Calling 'git remote'
2024-06-25 00:45:41,734 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:41,734 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-06-25 00:45:41,734 [ scc.git] DEBUG Calling 'git remote'
2024-06-25 00:45:41,740 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:41,740 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-06-25 00:45:41,740 [ scc.git] DEBUG Calling 'git remote'
2024-06-25 00:45:41,745 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:41,745 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-06-25 00:45:41,745 [ scc.git] DEBUG Calling 'git remote'
2024-06-25 00:45:41,750 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:41,750 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-06-25 00:45:41,750 [ scc.git] DEBUG Calling 'git remote'
2024-06-25 00:45:41,755 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:41,755 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-06-25 00:45:41,755 [ scc.git] DEBUG Calling 'git remote'
2024-06-25 00:45:41,760 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:41,760 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-06-25 00:45:41,760 [ scc.git] DEBUG Calling 'git remote'
2024-06-25 00:45:41,765 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:41,765 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-06-25 00:45:41,765 [ scc.git] DEBUG Calling 'git remote'
2024-06-25 00:45:41,770 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:41,770 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-06-25 00:45:41,770 [ scc.git] DEBUG Calling 'git remote'
2024-06-25 00:45:41,774 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:41,775 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-06-25 00:45:41,775 [ scc.git] DEBUG Calling 'git remote'
2024-06-25 00:45:41,779 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:41,780 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-06-25 00:45:41,780 [ scc.git] DEBUG Calling 'git remote'
2024-06-25 00:45:41,785 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:41,786 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-06-25 00:45:41,786 [ scc.git] DEBUG Calling 'git remote'
2024-06-25 00:45:41,791 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:41,791 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-06-25 00:45:41,791 [ scc.git] DEBUG Calling 'git remote'
2024-06-25 00:45:41,796 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:41,797 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-06-25 00:45:41,797 [ scc.git] DEBUG Calling 'git remote'
2024-06-25 00:45:41,801 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:41,801 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-06-25 00:45:41,801 [ scc.git] DEBUG Calling 'git remote'
2024-06-25 00:45:41,806 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-25 00:45:41,806 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-06-25 00:45:41,806 [ scc.git] DEBUG Calling 'git remote'
2024-06-25 00:45:41,810 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.9.1 to 5.9.2-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD 058665e] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
HEAD detached from 027b3e6
nothing to commit, working tree clean
Entering 'omero-cli-render'
HEAD detached from 53e3f42
nothing to commit, working tree clean
Entering 'omero-cli-zarr'
HEAD detached from 2ca566b
Untracked files:
(use "git add <file>..." to include in what will be committed)
.eggs/
nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
HEAD detached from 9ffbc8b7
nothing to commit, working tree clean
Entering 'omero-fpbioimage'
HEAD detached from e5b3ca3
nothing to commit, working tree clean
Entering 'omero-gallery'
HEAD detached from 56f4435
nothing to commit, working tree clean
Entering 'omero-iviewer'
HEAD detached from a8f380f
nothing to commit, working tree clean
Entering 'omero-mapr'
HEAD detached from 9631b15
nothing to commit, working tree clean
Entering 'omero-metadata'
HEAD detached from e2fc5ec
nothing to commit, working tree clean
Entering 'omero-parade'
HEAD detached from 5d441c2
nothing to commit, working tree clean
Entering 'omero-prometheus-tools'
HEAD detached from 18bccb6
nothing to commit, working tree clean
Entering 'omero-rois'
HEAD detached from 5c752d5
nothing to commit, working tree clean
Entering 'omero-signup'
HEAD detached from c8610db
nothing to commit, working tree clean
Entering 'omero-test-infra'
HEAD detached from cda3ec6
nothing to commit, working tree clean
Entering 'omero-upload'
HEAD detached from aca9e9c
nothing to commit, working tree clean
Entering 'omero-virtual-microscope'
HEAD detached from deab817
nothing to commit, working tree clean
Entering 'omero-web-zarr'
HEAD detached from 67bb245
nothing to commit, working tree clean
Entering 'omero-weberror'
HEAD detached from adfa132
nothing to commit, working tree clean
Entering 'omero-webtest'
HEAD detached from 8da48e1
nothing to commit, working tree clean
Entering 'rOMERO-gateway'
HEAD detached from 7b5d64d
nothing to commit, working tree clean
Entering 'scripts'
HEAD detached from c20d273
nothing to commit, working tree clean
[detached HEAD 69614fa] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2024-06-25 00:46:28,271 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2024-06-25 00:46:37,558 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2024-06-25 00:46:39,983 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-06-25 00:46:44,690 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-06-25 00:47:33,496 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
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