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xport tests'
    - src/omero_zarr/raw_pixels.py
  - Upstream changes
    - src/omero_zarr/raw_pixels.py
    - .isort.cfg

--conflicts

2024-07-05 00:44:45,096 [  scc.config] DEBUG Found github.token
2024-07-05 00:44:45,097 [     scc.git] DEBUG Not adding comment to issue #123, already --conflicts.
2024-07-05 00:44:45,097 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef'
2024-07-05 00:44:45,103 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:44:45,108 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef'
2024-07-05 00:44:45,122 [     scc.git] DEBUG Auto-merging src/omero_zarr/masks.py
2024-07-05 00:44:45,123 [     scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py
2024-07-05 00:44:45,123 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-05 00:44:45,127 [     scc.git] DEBUG  README.rst                   | 30 ++++++++++++++++++------------
2024-07-05 00:44:45,127 [     scc.git] DEBUG  src/omero_zarr/cli.py        |  9 +++++++++
2024-07-05 00:44:45,127 [     scc.git] DEBUG  src/omero_zarr/masks.py      |  4 ++--
2024-07-05 00:44:45,127 [     scc.git] DEBUG  src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++-----
2024-07-05 00:44:45,127 [     scc.git] DEBUG  src/omero_zarr/util.py       |  2 +-
2024-07-05 00:44:45,127 [     scc.git] DEBUG  5 files changed, 53 insertions(+), 20 deletions(-)
2024-07-05 00:44:45,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:44:45,482 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-05 00:44:45,524 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:44:45,524 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:44:45,531 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-05 00:44:45,573 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-05 00:44:45,583 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ee6df4c0> has no local changes
2024-07-05 00:44:45,583 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-cli-zarr
Excluded PRs:
  - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft)
Already up to date.

Merged PRs:
  - PR 147 will-moore 'Name option'

Conflicting PRs (not included):
  - PR 102 will-moore 'Zarr export tests'
  - PR 123 will-moore 'Support export of Fileset:ID'

Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)'
2024-07-05 00:44:45,594 [     scc.git] DEBUG [detached HEAD a5d6c9e] merge master -Dorg -Ssuccess-only
2024-07-05 00:44:45,595 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:44:45,595 [    scc.repo] DEBUG ## PRs found:
2024-07-05 00:44:45,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None
2024-07-05 00:44:46,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/575 HTTP/1.1" 200 None
2024-07-05 00:44:46,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None
2024-07-05 00:44:47,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None
2024-07-05 00:44:47,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None
2024-07-05 00:44:48,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-05 00:44:48,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-05 00:44:49,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None
2024-07-05 00:44:49,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2
2024-07-05 00:44:49,757 [    scc.repo] DEBUG   - PR 568 will-moore 'Remove numpy from tests_require in setup.py'
2024-07-05 00:44:50,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None
2024-07-05 00:44:50,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None
2024-07-05 00:44:51,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None
2024-07-05 00:44:51,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-05 00:44:52,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-05 00:44:52,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None
2024-07-05 00:44:53,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2
2024-07-05 00:44:53,078 [    scc.repo] DEBUG   - PR 555 will-moore 'Points in shape editor'
2024-07-05 00:44:53,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None
2024-07-05 00:44:53,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549/comments HTTP/1.1" 200 None
2024-07-05 00:44:54,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77 HTTP/1.1" 200 None
2024-07-05 00:44:55,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-05 00:44:55,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-05 00:44:56,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77 HTTP/1.1" 200 None
2024-07-05 00:44:56,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/f7d26b972bfe9a7105c4f94776748446f2395c77?per_page=1 HTTP/1.1" 200 2
2024-07-05 00:44:56,434 [    scc.repo] DEBUG   - PR 549 will-moore 'Inset feature'
2024-07-05 00:44:56,435 [    scc.repo] DEBUG ## Branches found:
2024-07-05 00:44:56,435 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2024-07-05 00:44:56,435 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:44:56,435 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:44:56,441 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-05 00:44:56,446 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-05 00:44:56,446 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-05 00:44:56,453 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-05 00:44:56,460 [     scc.git] DEBUG Already up to date.

2024-07-05 00:44:56,461 [     scc.git] DEBUG Calling 'git fetch origin pull/549/head'
2024-07-05 00:44:56,899 [     scc.git] DEBUG From https://github.com/ome/omero-figure
2024-07-05 00:44:56,899 [     scc.git] DEBUG  * branch              refs/pull/549/head -> FETCH_HEAD
2024-07-05 00:44:56,904 [     scc.git] DEBUG Calling 'git fetch origin pull/555/head'
2024-07-05 00:44:57,716 [     scc.git] DEBUG From https://github.com/ome/omero-figure
2024-07-05 00:44:57,716 [     scc.git] DEBUG  * branch              refs/pull/555/head -> FETCH_HEAD
2024-07-05 00:44:57,724 [     scc.git] DEBUG Calling 'git fetch origin pull/568/head'
2024-07-05 00:44:58,124 [     scc.git] DEBUG From https://github.com/ome/omero-figure
2024-07-05 00:44:58,124 [     scc.git] DEBUG  * branch              refs/pull/568/head -> FETCH_HEAD
2024-07-05 00:44:58,129 [     scc.git] DEBUG ## Unique users: []
2024-07-05 00:44:58,129 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:44:58,129 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:44:58,138 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...f7d26b972bfe9a7105c4f94776748446f2395c77'
2024-07-05 00:44:58,146 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:44:58,152 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) f7d26b972bfe9a7105c4f94776748446f2395c77'
2024-07-05 00:44:58,253 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-05 00:44:58,259 [     scc.git] DEBUG  src/js/models/figure_model.js         |  8 +++-
2024-07-05 00:44:58,259 [     scc.git] DEBUG  src/js/models/panel_model.js          | 84 +++++++++++++++++++++++++++++++++++
2024-07-05 00:44:58,259 [     scc.git] DEBUG  src/js/shapeEditorTest.js             |  7 +++
2024-07-05 00:44:58,259 [     scc.git] DEBUG  src/js/shape_editor/rect.js           | 33 +++++++++++++-
2024-07-05 00:44:58,259 [     scc.git] DEBUG  src/js/shape_editor/shape_manager.js  |  1 +
2024-07-05 00:44:58,259 [     scc.git] DEBUG  src/js/views/figure_view.js           |  7 ++-
2024-07-05 00:44:58,259 [     scc.git] DEBUG  src/js/views/right_panel_view.js      | 74 +++++++++++++++++++++++++++++-
2024-07-05 00:44:58,260 [     scc.git] DEBUG  src/js/views/util.js                  | 54 ++++++++++++++++++++++
2024-07-05 00:44:58,262 [     scc.git] DEBUG  src/templates/rois_form.template.html |  8 ++++
2024-07-05 00:44:58,262 [     scc.git] DEBUG  9 files changed, 271 insertions(+), 5 deletions(-)
2024-07-05 00:44:58,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:44:58,419 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab'
2024-07-05 00:44:58,429 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:44:58,435 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab'
2024-07-05 00:44:58,572 [     scc.git] DEBUG Auto-merging src/js/models/panel_model.js
2024-07-05 00:44:58,573 [     scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js
2024-07-05 00:44:58,573 [     scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js
2024-07-05 00:44:58,573 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-05 00:44:58,579 [     scc.git] DEBUG  .../scripts/omero/figure_scripts/Figure_To_Pdf.py  |   8 +-
2024-07-05 00:44:58,579 [     scc.git] DEBUG  src/css/figure.css                                 |   4 +
2024-07-05 00:44:58,579 [     scc.git] DEBUG  src/images/point-icon-24.png                       | Bin 0 -> 2477 bytes
2024-07-05 00:44:58,579 [     scc.git] DEBUG  src/js/models/panel_model.js                       |   2 +-
2024-07-05 00:44:58,579 [     scc.git] DEBUG  src/js/shapeEditorTest.js                          |   5 +
2024-07-05 00:44:58,579 [     scc.git] DEBUG  src/js/shape_editor/ellipse.js                     | 474 ++++++++++++++++++++-
2024-07-05 00:44:58,579 [     scc.git] DEBUG  src/js/shape_editor/shape_manager.js               |  12 +-
2024-07-05 00:44:58,579 [     scc.git] DEBUG  src/js/views/roi_loader_view.js                    |   1 +
2024-07-05 00:44:58,579 [     scc.git] DEBUG  src/shapeEditorTest.html                           |   4 +-
2024-07-05 00:44:58,579 [     scc.git] DEBUG  src/templates/shapes/shape_toolbar.template.html   |   3 +
2024-07-05 00:44:58,579 [     scc.git] DEBUG  10 files changed, 502 insertions(+), 11 deletions(-)
2024-07-05 00:44:58,580 [     scc.git] DEBUG  create mode 100644 src/images/point-icon-24.png
2024-07-05 00:44:58,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:44:58,875 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6'
2024-07-05 00:44:58,888 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:44:58,895 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6'
2024-07-05 00:44:58,941 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-05 00:44:58,945 [     scc.git] DEBUG  setup.py | 2 +-
2024-07-05 00:44:58,945 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 1 deletion(-)
2024-07-05 00:44:59,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:44:59,294 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-05 00:44:59,339 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:44:59,340 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:44:59,346 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-05 00:44:59,385 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-05 00:44:59,395 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ee6db430> has no local changes
2024-07-05 00:44:59,395 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-figure
Excluded PRs:
  - PR 575 Tom-TBT 'Label sorting with drag and drop' (user: Tom-TBT)
  - PR 560 will-moore 'Max projection bytes' (exclude comment)
  - PR 543 will-moore 'Plate well labels' (exclude comment)
Already up to date.

Merged PRs:
  - PR 549 will-moore 'Inset feature'
  - PR 555 will-moore 'Points in shape editor'
  - PR 568 will-moore 'Remove numpy from tests_require in setup.py'

Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)'
2024-07-05 00:44:59,407 [     scc.git] DEBUG [detached HEAD 0cf0a68f] merge master -Dorg -Ssuccess-only
2024-07-05 00:44:59,407 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:44:59,407 [    scc.repo] DEBUG ## PRs found:
2024-07-05 00:44:59,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None
2024-07-05 00:45:00,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None
2024-07-05 00:45:00,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None
2024-07-05 00:45:01,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2024-07-05 00:45:01,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-05 00:45:02,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2024-07-05 00:45:02,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2
2024-07-05 00:45:02,678 [    scc.repo] DEBUG   - PR 18 jburel 'default  size z value'
2024-07-05 00:45:02,679 [    scc.repo] DEBUG ## Branches found:
2024-07-05 00:45:02,679 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2024-07-05 00:45:02,679 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:45:02,679 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:02,685 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-05 00:45:02,691 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-05 00:45:02,691 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-05 00:45:02,697 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-05 00:45:02,703 [     scc.git] DEBUG Already up to date.

2024-07-05 00:45:02,703 [     scc.git] DEBUG Calling 'git fetch origin pull/18/head'
2024-07-05 00:45:03,113 [     scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2024-07-05 00:45:03,114 [     scc.git] DEBUG  * branch            refs/pull/18/head -> FETCH_HEAD
2024-07-05 00:45:03,119 [     scc.git] DEBUG ## Unique users: []
2024-07-05 00:45:03,119 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:45:03,120 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:03,125 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337'
2024-07-05 00:45:03,132 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:03,137 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default  size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337'
2024-07-05 00:45:03,168 [     scc.git] DEBUG Auto-merging omero_fpbioimage/views.py
2024-07-05 00:45:03,169 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-05 00:45:03,171 [     scc.git] DEBUG  omero_fpbioimage/views.py | 2 ++
2024-07-05 00:45:03,172 [     scc.git] DEBUG  1 file changed, 2 insertions(+)
2024-07-05 00:45:03,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:45:03,366 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-05 00:45:03,408 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:45:03,408 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:03,416 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-05 00:45:03,458 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-05 00:45:03,465 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ee718a60> has no local changes
2024-07-05 00:45:03,466 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-fpbioimage
Already up to date.

Merged PRs:
  - PR 18 jburel 'default  size z value'

Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)'
2024-07-05 00:45:03,475 [     scc.git] DEBUG [detached HEAD fd39a80] merge master -Dorg -Ssuccess-only
2024-07-05 00:45:03,475 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:45:03,475 [    scc.repo] DEBUG ## PRs found:
2024-07-05 00:45:03,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None
2024-07-05 00:45:04,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None
2024-07-05 00:45:04,331 [    scc.repo] DEBUG   # ... Include label: dependencies
2024-07-05 00:45:04,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None
2024-07-05 00:45:05,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-05 00:45:05,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-05 00:45:06,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None
2024-07-05 00:45:06,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2
2024-07-05 00:45:06,861 [    scc.repo] DEBUG   - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'
2024-07-05 00:45:06,861 [    scc.repo] DEBUG ## Branches found:
2024-07-05 00:45:06,861 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-07-05 00:45:06,861 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:45:06,861 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:06,867 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-05 00:45:06,872 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-05 00:45:06,872 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-05 00:45:06,877 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-05 00:45:06,883 [     scc.git] DEBUG Already up to date.

2024-07-05 00:45:06,883 [     scc.git] DEBUG Calling 'git fetch origin pull/111/head'
2024-07-05 00:45:07,249 [     scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-07-05 00:45:07,250 [     scc.git] DEBUG  * branch            refs/pull/111/head -> FETCH_HEAD
2024-07-05 00:45:07,254 [     scc.git] DEBUG ## Unique users: []
2024-07-05 00:45:07,255 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:45:07,255 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:07,260 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893'
2024-07-05 00:45:07,265 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:07,270 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893'
2024-07-05 00:45:07,280 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-05 00:45:07,284 [     scc.git] DEBUG  package-lock.json | 18 ++++++------------
2024-07-05 00:45:07,284 [     scc.git] DEBUG  1 file changed, 6 insertions(+), 12 deletions(-)
2024-07-05 00:45:07,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:45:07,438 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-05 00:45:07,479 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:45:07,479 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:07,484 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-05 00:45:07,523 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-05 00:45:07,530 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec698fd0> has no local changes
2024-07-05 00:45:07,530 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-gallery
Already up to date.

Merged PRs:
  - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'

Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)'
2024-07-05 00:45:07,539 [     scc.git] DEBUG [detached HEAD be316bb] merge master -Dorg -Ssuccess-only
2024-07-05 00:45:07,540 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:45:07,540 [    scc.repo] DEBUG ## PRs found:
2024-07-05 00:45:08,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None
2024-07-05 00:45:08,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None
2024-07-05 00:45:08,580 [    scc.repo] DEBUG   # ... Include label: dependencies
2024-07-05 00:45:09,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None
2024-07-05 00:45:09,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-05 00:45:10,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-05 00:45:10,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None
2024-07-05 00:45:11,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2
2024-07-05 00:45:11,258 [    scc.repo] DEBUG   - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5'
2024-07-05 00:45:11,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None
2024-07-05 00:45:11,721 [    scc.repo] DEBUG   # ... Include label: dependencies
2024-07-05 00:45:12,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None
2024-07-05 00:45:12,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-05 00:45:13,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-05 00:45:13,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None
2024-07-05 00:45:14,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2
2024-07-05 00:45:14,275 [    scc.repo] DEBUG   - PR 477 dependabot[bot] 'Bump ws and socket.io'
2024-07-05 00:45:14,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None
2024-07-05 00:45:15,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None
2024-07-05 00:45:15,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-07-05 00:45:16,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-05 00:45:16,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-05 00:45:17,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-07-05 00:45:17,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2
2024-07-05 00:45:17,598 [    scc.repo] DEBUG   - PR 471 will-moore 'Z projection disabled tooltip'
2024-07-05 00:45:18,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None
2024-07-05 00:45:18,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None
2024-07-05 00:45:19,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-07-05 00:45:19,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-05 00:45:20,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-05 00:45:20,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-07-05 00:45:21,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2
2024-07-05 00:45:21,202 [    scc.repo] DEBUG   - PR 465 will-moore 'Save as Figure'
2024-07-05 00:45:21,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None
2024-07-05 00:45:22,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None
2024-07-05 00:45:22,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-07-05 00:45:23,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-05 00:45:23,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-07-05 00:45:24,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2
2024-07-05 00:45:24,031 [    scc.repo] DEBUG   - PR 460 will-moore 'Channel min spinner fix'
2024-07-05 00:45:24,032 [    scc.repo] DEBUG ## Branches found:
2024-07-05 00:45:24,032 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-07-05 00:45:24,032 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:45:24,033 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:24,043 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-05 00:45:24,051 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-05 00:45:24,052 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-05 00:45:24,060 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-05 00:45:24,067 [     scc.git] DEBUG Already up to date.

2024-07-05 00:45:24,068 [     scc.git] DEBUG Calling 'git fetch origin pull/460/head'
2024-07-05 00:45:24,779 [     scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-07-05 00:45:24,780 [     scc.git] DEBUG  * branch            refs/pull/460/head -> FETCH_HEAD
2024-07-05 00:45:24,788 [     scc.git] DEBUG Calling 'git fetch origin pull/465/head'
2024-07-05 00:45:25,805 [     scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-07-05 00:45:25,807 [     scc.git] DEBUG  * branch            refs/pull/465/head -> FETCH_HEAD
2024-07-05 00:45:25,817 [     scc.git] DEBUG Calling 'git fetch origin pull/471/head'
2024-07-05 00:45:26,261 [     scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-07-05 00:45:26,262 [     scc.git] DEBUG  * branch            refs/pull/471/head -> FETCH_HEAD
2024-07-05 00:45:26,270 [     scc.git] DEBUG Calling 'git fetch origin pull/477/head'
2024-07-05 00:45:26,769 [     scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-07-05 00:45:26,770 [     scc.git] DEBUG  * branch            refs/pull/477/head -> FETCH_HEAD
2024-07-05 00:45:26,777 [     scc.git] DEBUG Calling 'git fetch origin pull/478/head'
2024-07-05 00:45:27,148 [     scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-07-05 00:45:27,148 [     scc.git] DEBUG  * branch            refs/pull/478/head -> FETCH_HEAD
2024-07-05 00:45:27,158 [     scc.git] DEBUG ## Unique users: []
2024-07-05 00:45:27,159 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:45:27,159 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:27,172 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-07-05 00:45:27,188 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:27,201 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-07-05 00:45:27,261 [     scc.git] DEBUG Auto-merging src/model/image_info.js
2024-07-05 00:45:27,263 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-05 00:45:27,268 [     scc.git] DEBUG  src/model/image_info.js       | 7 ++++---
2024-07-05 00:45:27,268 [     scc.git] DEBUG  src/settings/channel-range.js | 4 +++-
2024-07-05 00:45:27,268 [     scc.git] DEBUG  2 files changed, 7 insertions(+), 4 deletions(-)
2024-07-05 00:45:27,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:45:27,452 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd'
2024-07-05 00:45:27,460 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:27,466 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd'
2024-07-05 00:45:27,573 [     scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py
2024-07-05 00:45:27,574 [     scc.git] DEBUG Auto-merging src/app/context.js
2024-07-05 00:45:27,574 [     scc.git] DEBUG Auto-merging src/utils/constants.js
2024-07-05 00:45:27,574 [     scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js
2024-07-05 00:45:27,575 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-05 00:45:27,580 [     scc.git] DEBUG  plugin/omero_iviewer/views.py |  17 +++-
2024-07-05 00:45:27,580 [     scc.git] DEBUG  src/app/context.js            |   6 +-
2024-07-05 00:45:27,580 [     scc.git] DEBUG  src/app/header.html           |   5 +
2024-07-05 00:45:27,580 [     scc.git] DEBUG  src/app/header.js             |  45 ++++++++-
2024-07-05 00:45:27,580 [     scc.git] DEBUG  src/utils/constants.js        |   6 ++
2024-07-05 00:45:27,580 [     scc.git] DEBUG  src/utils/figure.js           | 217 ++++++++++++++++++++++++++++++++++++++++++
2024-07-05 00:45:27,580 [     scc.git] DEBUG  6 files changed, 290 insertions(+), 6 deletions(-)
2024-07-05 00:45:27,580 [     scc.git] DEBUG  create mode 100644 src/utils/figure.js
2024-07-05 00:45:27,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:45:27,868 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9'
2024-07-05 00:45:27,876 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:27,882 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9'
2024-07-05 00:45:27,968 [     scc.git] DEBUG Auto-merging src/controls/dimension-slider.js
2024-07-05 00:45:27,970 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-05 00:45:27,975 [     scc.git] DEBUG  src/controls/dimension-slider.html |  2 +-
2024-07-05 00:45:27,975 [     scc.git] DEBUG  src/controls/dimension-slider.js   | 20 ++++++++++++++++++++
2024-07-05 00:45:27,975 [     scc.git] DEBUG  2 files changed, 21 insertions(+), 1 deletion(-)
2024-07-05 00:45:28,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:45:28,302 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5'
2024-07-05 00:45:28,346 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:28,367 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5'
2024-07-05 00:45:28,420 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-05 00:45:28,430 [     scc.git] DEBUG  package-lock.json | 108 ++++++++++++++++++++++++++++++++++--------------------
2024-07-05 00:45:28,430 [     scc.git] DEBUG  1 file changed, 68 insertions(+), 40 deletions(-)
2024-07-05 00:45:28,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:45:28,714 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11'
2024-07-05 00:45:28,738 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:28,746 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11'
2024-07-05 00:45:28,816 [     scc.git] DEBUG Auto-merging package-lock.json
2024-07-05 00:45:28,817 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-05 00:45:29,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:45:29,115 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-05 00:45:29,156 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:45:29,157 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:29,163 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-05 00:45:29,224 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-05 00:45:29,237 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ee716bb0> has no local changes
2024-07-05 00:45:29,237 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-iviewer
Excluded PRs:
  - PR 420 will-moore 'Add release process to README' (exclude comment)
  - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Already up to date.

Merged PRs:
  - PR 460 will-moore 'Channel min spinner fix'
  - PR 465 will-moore 'Save as Figure'
  - PR 471 will-moore 'Z projection disabled tooltip'
  - PR 477 dependabot[bot] 'Bump ws and socket.io'
  - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5'

Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)'
2024-07-05 00:45:29,250 [     scc.git] DEBUG [detached HEAD 44b01e6] merge master -Dorg -Ssuccess-only
2024-07-05 00:45:29,250 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:45:29,251 [    scc.repo] DEBUG ## PRs found:
2024-07-05 00:45:29,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2024-07-05 00:45:30,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2024-07-05 00:45:30,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2024-07-05 00:45:31,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-07-05 00:45:31,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-05 00:45:32,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-05 00:45:32,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-07-05 00:45:32,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2024-07-05 00:45:32,998 [    scc.repo] DEBUG   - PR 74 will-moore 'mapr extension of webclient'
2024-07-05 00:45:32,999 [    scc.repo] DEBUG ## Branches found:
2024-07-05 00:45:32,999 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-07-05 00:45:32,999 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:45:33,000 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:33,015 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-05 00:45:33,028 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-05 00:45:33,029 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-05 00:45:33,041 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-05 00:45:33,055 [     scc.git] DEBUG Already up to date.

2024-07-05 00:45:33,056 [     scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2024-07-05 00:45:33,435 [     scc.git] DEBUG From https://github.com/ome/omero-mapr
2024-07-05 00:45:33,435 [     scc.git] DEBUG  * branch            refs/pull/74/head -> FETCH_HEAD
2024-07-05 00:45:33,444 [     scc.git] DEBUG ## Unique users: []
2024-07-05 00:45:33,444 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:45:33,444 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:33,455 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-07-05 00:45:33,476 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:33,490 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-07-05 00:45:33,516 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-05 00:45:33,521 [     scc.git] DEBUG  .../templates/webclient/base/base_container.html   | 182 +++++++++++++
2024-07-05 00:45:33,521 [     scc.git] DEBUG  .../data/includes/right_plugin.general.js.html     | 290 ---------------------
2024-07-05 00:45:33,521 [     scc.git] DEBUG  requirements.txt                                   |   2 +-
2024-07-05 00:45:33,521 [     scc.git] DEBUG  3 files changed, 183 insertions(+), 291 deletions(-)
2024-07-05 00:45:33,521 [     scc.git] DEBUG  create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2024-07-05 00:45:33,522 [     scc.git] DEBUG  delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2024-07-05 00:45:33,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:45:33,699 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-05 00:45:33,780 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:45:33,781 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:33,791 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-05 00:45:33,861 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-05 00:45:33,873 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec651610> has no local changes
2024-07-05 00:45:33,874 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-mapr
Excluded PRs:
  - PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.

Merged PRs:
  - PR 74 will-moore 'mapr extension of webclient'

Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)'
2024-07-05 00:45:33,888 [     scc.git] DEBUG [detached HEAD 7090dfe] merge master -Dorg -Ssuccess-only
2024-07-05 00:45:33,890 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:45:33,890 [    scc.repo] DEBUG ## PRs found:
2024-07-05 00:45:34,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2024-07-05 00:45:34,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2024-07-05 00:45:35,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2024-07-05 00:45:35,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-07-05 00:45:36,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-05 00:45:36,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-07-05 00:45:37,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2024-07-05 00:45:37,107 [    scc.repo] DEBUG   - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-07-05 00:45:37,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2024-07-05 00:45:38,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2024-07-05 00:45:38,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-07-05 00:45:39,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-05 00:45:39,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-07-05 00:45:40,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2024-07-05 00:45:40,010 [    scc.repo] DEBUG   - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-07-05 00:45:40,010 [    scc.repo] DEBUG ## Branches found:
2024-07-05 00:45:40,010 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-07-05 00:45:40,010 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:45:40,010 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:40,019 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-05 00:45:40,028 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-05 00:45:40,029 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-05 00:45:40,040 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-05 00:45:40,053 [     scc.git] DEBUG Already up to date.

2024-07-05 00:45:40,056 [     scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2024-07-05 00:45:40,641 [     scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-07-05 00:45:40,641 [     scc.git] DEBUG  * branch            refs/pull/55/head -> FETCH_HEAD
2024-07-05 00:45:40,649 [     scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2024-07-05 00:45:41,314 [     scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-07-05 00:45:41,314 [     scc.git] DEBUG  * branch            refs/pull/64/head -> FETCH_HEAD
2024-07-05 00:45:41,323 [     scc.git] DEBUG ## Unique users: []
2024-07-05 00:45:41,324 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:45:41,324 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:41,335 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-07-05 00:45:41,348 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:41,361 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-07-05 00:45:41,472 [     scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2024-07-05 00:45:41,473 [     scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2024-07-05 00:45:41,473 [     scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-07-05 00:45:41,473 [     scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-07-05 00:45:41,473 [     scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-07-05 00:45:41,474 [     scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-07-05 00:45:41,486 [     scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-07-05 00:45:41,498 [     scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging
2024-07-05 00:45:41,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:45:41,668 [     scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-07-05 00:45:41,682 [     scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-07-05 00:45:41,693 [     scc.git] INFO    - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#116](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/consoleText) for more details.
Possible conflicts:
  - Upstream changes
    - src/omero_metadata/populate.py
    - src/omero_metadata/cli.py

--conflicts

2024-07-05 00:45:41,700 [  scc.config] DEBUG Found github.token
2024-07-05 00:45:41,700 [     scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2024-07-05 00:45:41,700 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2024-07-05 00:45:41,710 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:41,719 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2024-07-05 00:45:41,744 [     scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-07-05 00:45:41,745 [     scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-07-05 00:45:41,745 [     scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2024-07-05 00:45:41,745 [     scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-07-05 00:45:41,746 [     scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-07-05 00:45:41,755 [     scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-07-05 00:45:41,766 [     scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging
2024-07-05 00:45:42,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:45:42,085 [     scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7'
2024-07-05 00:45:42,097 [     scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-07-05 00:45:42,106 [     scc.git] INFO    - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#116](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/consoleText) for more details.
Possible conflicts:
  - PR #55 kkoz 'Prevent users from creating columns with python keyword names'
    - src/omero_metadata/populate.py
  - Upstream changes
    - src/omero_metadata/populate.py

--conflicts

2024-07-05 00:45:42,116 [  scc.config] DEBUG Found github.token
2024-07-05 00:45:42,116 [     scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2024-07-05 00:45:42,116 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-05 00:45:42,188 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:45:42,188 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:42,196 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-05 00:45:42,282 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-05 00:45:42,297 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec6518b0> has no local changes
2024-07-05 00:45:42,297 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-metadata
Already up to date.

Conflicting PRs (not included):
  - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
  - PR 64 will-moore 'Support images_by_name for Screen and Plate'

Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)'
2024-07-05 00:45:42,316 [     scc.git] DEBUG [detached HEAD 4706c66] merge master -Dorg -Ssuccess-only
2024-07-05 00:45:42,317 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:45:42,318 [    scc.repo] DEBUG ## PRs found:
2024-07-05 00:45:42,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2024-07-05 00:45:43,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None
2024-07-05 00:45:43,090 [    scc.repo] DEBUG   # ... Include label: dependencies
2024-07-05 00:45:43,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None
2024-07-05 00:45:44,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-05 00:45:44,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-05 00:45:45,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None
2024-07-05 00:45:45,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2
2024-07-05 00:45:45,580 [    scc.repo] DEBUG   - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
2024-07-05 00:45:46,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None
2024-07-05 00:45:46,127 [    scc.repo] DEBUG   # ... Include label: dependencies
2024-07-05 00:45:46,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None
2024-07-05 00:45:47,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-05 00:45:47,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-05 00:45:48,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None
2024-07-05 00:45:48,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2
2024-07-05 00:45:48,697 [    scc.repo] DEBUG   - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
2024-07-05 00:45:49,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None
2024-07-05 00:45:49,158 [    scc.repo] DEBUG   # ... Include label: dependencies
2024-07-05 00:45:49,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None
2024-07-05 00:45:50,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-05 00:45:50,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-05 00:45:51,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None
2024-07-05 00:45:51,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2
2024-07-05 00:45:51,587 [    scc.repo] DEBUG   - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
2024-07-05 00:45:52,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2024-07-05 00:45:52,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2024-07-05 00:45:52,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2024-07-05 00:45:53,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2024-07-05 00:45:53,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2024-07-05 00:45:54,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2024-07-05 00:45:54,422 [    scc.repo] DEBUG ## Branches found:
2024-07-05 00:45:54,422 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-07-05 00:45:54,422 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:45:54,422 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:54,429 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-05 00:45:54,437 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-05 00:45:54,437 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-05 00:45:54,444 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-05 00:45:54,451 [     scc.git] DEBUG Already up to date.

2024-07-05 00:45:54,451 [     scc.git] DEBUG Calling 'git fetch origin pull/128/head'
2024-07-05 00:45:54,843 [     scc.git] DEBUG From https://github.com/ome/omero-parade
2024-07-05 00:45:54,843 [     scc.git] DEBUG  * branch            refs/pull/128/head -> FETCH_HEAD
2024-07-05 00:45:54,848 [     scc.git] DEBUG Calling 'git fetch origin pull/129/head'
2024-07-05 00:45:55,241 [     scc.git] DEBUG From https://github.com/ome/omero-parade
2024-07-05 00:45:55,241 [     scc.git] DEBUG  * branch            refs/pull/129/head -> FETCH_HEAD
2024-07-05 00:45:55,246 [     scc.git] DEBUG Calling 'git fetch origin pull/131/head'
2024-07-05 00:45:55,635 [     scc.git] DEBUG From https://github.com/ome/omero-parade
2024-07-05 00:45:55,635 [     scc.git] DEBUG  * branch            refs/pull/131/head -> FETCH_HEAD
2024-07-05 00:45:55,640 [     scc.git] DEBUG ## Unique users: []
2024-07-05 00:45:55,640 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:45:55,640 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:55,646 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680'
2024-07-05 00:45:55,651 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:55,656 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680'
2024-07-05 00:45:55,667 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-05 00:45:55,670 [     scc.git] DEBUG  package-lock.json | 12 ++++++++----
2024-07-05 00:45:55,670 [     scc.git] DEBUG  1 file changed, 8 insertions(+), 4 deletions(-)
2024-07-05 00:45:55,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:45:55,837 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec'
2024-07-05 00:45:55,843 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:55,849 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec'
2024-07-05 00:45:55,901 [     scc.git] DEBUG Auto-merging package-lock.json
2024-07-05 00:45:55,902 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-05 00:45:55,905 [     scc.git] DEBUG  package-lock.json | 121 +++++++++++++++++++++++++++---------------------------
2024-07-05 00:45:55,905 [     scc.git] DEBUG  1 file changed, 61 insertions(+), 60 deletions(-)
2024-07-05 00:45:56,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:45:56,250 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f'
2024-07-05 00:45:56,256 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:56,261 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f'
2024-07-05 00:45:56,288 [     scc.git] DEBUG Auto-merging package-lock.json
2024-07-05 00:45:56,289 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-05 00:45:56,294 [     scc.git] DEBUG  package-lock.json | 8 ++++----
2024-07-05 00:45:56,294 [     scc.git] DEBUG  package.json      | 2 +-
2024-07-05 00:45:56,294 [     scc.git] DEBUG  2 files changed, 5 insertions(+), 5 deletions(-)
2024-07-05 00:45:56,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:45:56,653 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-05 00:45:56,695 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:45:56,695 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:56,701 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-05 00:45:56,740 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-05 00:45:56,748 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec651670> has no local changes
2024-07-05 00:45:56,749 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-parade
Excluded PRs:
  - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
  - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
  - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.

Merged PRs:
  - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
  - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
  - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'

Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)'
2024-07-05 00:45:56,759 [     scc.git] DEBUG [detached HEAD c62116a] merge master -Dorg -Ssuccess-only
2024-07-05 00:45:56,759 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:45:56,759 [    scc.repo] DEBUG ## PRs found:
2024-07-05 00:45:57,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None
2024-07-05 00:45:57,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None
2024-07-05 00:45:58,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-07-05 00:45:58,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-05 00:45:59,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-07-05 00:45:59,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2
2024-07-05 00:45:59,553 [    scc.repo] DEBUG   - PR 14 jburel 'use conda-forge channel'
2024-07-05 00:45:59,553 [    scc.repo] DEBUG ## Branches found:
2024-07-05 00:45:59,553 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-07-05 00:45:59,553 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:45:59,553 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:59,560 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-05 00:45:59,564 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-05 00:45:59,565 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-05 00:45:59,570 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-05 00:45:59,575 [     scc.git] DEBUG Already up to date.

2024-07-05 00:45:59,576 [     scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-07-05 00:45:59,978 [     scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools
2024-07-05 00:45:59,978 [     scc.git] DEBUG  * branch            refs/pull/14/head -> FETCH_HEAD
2024-07-05 00:45:59,985 [     scc.git] DEBUG ## Unique users: []
2024-07-05 00:45:59,985 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:45:59,985 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:45:59,993 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-07-05 00:46:00,000 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:00,008 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-07-05 00:46:00,022 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-05 00:46:00,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:00,190 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-05 00:46:00,232 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:00,233 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:00,240 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-05 00:46:00,283 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-05 00:46:00,290 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ee6d5a30> has no local changes
2024-07-05 00:46:00,291 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-prometheus-tools
Already up to date.

Merged PRs:
  - PR 14 jburel 'use conda-forge channel'

Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)'
2024-07-05 00:46:00,300 [     scc.git] DEBUG [detached HEAD 27dad8a] merge master -Dorg -Ssuccess-only
2024-07-05 00:46:00,301 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:00,301 [    scc.repo] DEBUG ## PRs found:
2024-07-05 00:46:00,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2024-07-05 00:46:01,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None
2024-07-05 00:46:01,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None
2024-07-05 00:46:02,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None
2024-07-05 00:46:02,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-07-05 00:46:03,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-05 00:46:03,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-07-05 00:46:04,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2
2024-07-05 00:46:04,130 [    scc.repo] DEBUG   - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-07-05 00:46:04,130 [    scc.repo] DEBUG ## Branches found:
2024-07-05 00:46:04,130 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-07-05 00:46:04,130 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:04,130 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:04,136 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-05 00:46:04,141 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-05 00:46:04,141 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-05 00:46:04,147 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-05 00:46:04,152 [     scc.git] DEBUG Already up to date.

2024-07-05 00:46:04,152 [     scc.git] DEBUG Calling 'git fetch origin pull/6/head'
2024-07-05 00:46:04,605 [     scc.git] DEBUG From https://github.com/ome/omero-rois
2024-07-05 00:46:04,605 [     scc.git] DEBUG  * branch            refs/pull/6/head -> FETCH_HEAD
2024-07-05 00:46:04,610 [     scc.git] DEBUG ## Unique users: []
2024-07-05 00:46:04,610 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:04,610 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:04,617 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61'
2024-07-05 00:46:04,625 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:04,632 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61'
2024-07-05 00:46:04,645 [     scc.git] DEBUG Auto-merging src/omero_rois/library.py
2024-07-05 00:46:04,646 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-05 00:46:04,649 [     scc.git] DEBUG  src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++
2024-07-05 00:46:04,649 [     scc.git] DEBUG  1 file changed, 33 insertions(+)
2024-07-05 00:46:04,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:04,813 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-05 00:46:04,860 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:04,860 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:04,866 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-05 00:46:04,908 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-05 00:46:04,917 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec662b80> has no local changes
2024-07-05 00:46:04,918 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-rois
Excluded PRs:
  - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.

Merged PRs:
  - PR 6 dominikl 'Add method to create masks grouped by label id'

Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)'
2024-07-05 00:46:04,931 [     scc.git] DEBUG [detached HEAD 49a70e9] merge master -Dorg -Ssuccess-only
2024-07-05 00:46:04,932 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:04,932 [    scc.repo] DEBUG ## PRs found:
2024-07-05 00:46:05,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2024-07-05 00:46:05,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2024-07-05 00:46:06,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2024-07-05 00:46:06,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-07-05 00:46:07,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-05 00:46:07,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-07-05 00:46:08,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2024-07-05 00:46:08,201 [    scc.repo] DEBUG   - PR 14 manics 'Add pre-commit (black, flake8)'
2024-07-05 00:46:08,201 [    scc.repo] DEBUG ## Branches found:
2024-07-05 00:46:08,202 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-07-05 00:46:08,202 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:08,202 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:08,208 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-05 00:46:08,214 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-05 00:46:08,214 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-05 00:46:08,221 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-05 00:46:08,228 [     scc.git] DEBUG Already up to date.

2024-07-05 00:46:08,228 [     scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-07-05 00:46:08,660 [     scc.git] DEBUG From https://github.com/ome/omero-signup
2024-07-05 00:46:08,660 [     scc.git] DEBUG  * branch            refs/pull/14/head -> FETCH_HEAD
2024-07-05 00:46:08,666 [     scc.git] DEBUG ## Unique users: []
2024-07-05 00:46:08,666 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:08,666 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:08,672 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-07-05 00:46:08,680 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:08,686 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-07-05 00:46:08,719 [     scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2024-07-05 00:46:08,720 [     scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2024-07-05 00:46:08,720 [     scc.git] DEBUG Auto-merging omero_signup/urls.py
2024-07-05 00:46:08,720 [     scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2024-07-05 00:46:08,720 [     scc.git] DEBUG Auto-merging omero_signup/views.py
2024-07-05 00:46:08,720 [     scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2024-07-05 00:46:08,720 [     scc.git] DEBUG Auto-merging setup.py
2024-07-05 00:46:08,720 [     scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2024-07-05 00:46:08,720 [     scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-07-05 00:46:08,720 [     scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-07-05 00:46:08,727 [     scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319'
2024-07-05 00:46:08,735 [     scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0
2024-07-05 00:46:08,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:08,897 [     scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-07-05 00:46:08,905 [     scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319'
2024-07-05 00:46:08,913 [     scc.git] INFO    - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#116](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/consoleText) for more details.
Possible conflicts:
  - Upstream changes
    - omero_signup/views.py
    - omero_signup/urls.py
    - setup.py
    - omero_signup/signup_settings.py

--conflicts

2024-07-05 00:46:08,918 [  scc.config] DEBUG Found github.token
2024-07-05 00:46:08,919 [     scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2024-07-05 00:46:08,919 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-05 00:46:08,959 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:08,959 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:08,965 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-05 00:46:09,008 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-05 00:46:09,016 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec6bcf40> has no local changes
2024-07-05 00:46:09,016 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-signup
Already up to date.

Conflicting PRs (not included):
  - PR 14 manics 'Add pre-commit (black, flake8)'

Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)'
2024-07-05 00:46:09,026 [     scc.git] DEBUG [detached HEAD e0dc642] merge master -Dorg -Ssuccess-only
2024-07-05 00:46:09,026 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:09,026 [    scc.repo] DEBUG ## PRs found:
2024-07-05 00:46:09,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2024-07-05 00:46:09,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2024-07-05 00:46:10,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2024-07-05 00:46:10,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-07-05 00:46:11,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-05 00:46:11,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-07-05 00:46:12,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2024-07-05 00:46:12,172 [    scc.repo] DEBUG   - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-07-05 00:46:12,172 [    scc.repo] DEBUG ## Branches found:
2024-07-05 00:46:12,172 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-07-05 00:46:12,172 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:12,172 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:12,178 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-05 00:46:12,183 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-05 00:46:12,183 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-05 00:46:12,190 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-05 00:46:12,196 [     scc.git] DEBUG Already up to date.

2024-07-05 00:46:12,196 [     scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2024-07-05 00:46:12,665 [     scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2024-07-05 00:46:12,665 [     scc.git] DEBUG  * branch            refs/pull/12/head -> FETCH_HEAD
2024-07-05 00:46:12,670 [     scc.git] DEBUG ## Unique users: []
2024-07-05 00:46:12,670 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:12,670 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:12,675 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2024-07-05 00:46:12,683 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:12,688 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2024-07-05 00:46:12,701 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-05 00:46:12,704 [     scc.git] DEBUG  idr-compose.yml                            |  66 ++++++++++++++
2024-07-05 00:46:12,704 [     scc.git] DEBUG  idr-haproxy.yml                            |  58 +++++++++++++
2024-07-05 00:46:12,704 [     scc.git] DEBUG  idr/40-ansible.sh                          |   7 ++
2024-07-05 00:46:12,704 [     scc.git] DEBUG  idr/70-reset-password.sh                   |   1 +
2024-07-05 00:46:12,705 [     scc.git] DEBUG  idr/nginx/conf.d/default.conf              |   1 +
2024-07-05 00:46:12,705 [     scc.git] DEBUG  idr/nginx/conf.d/example_ssl.conf          |   1 +
2024-07-05 00:46:12,705 [     scc.git] DEBUG  idr/nginx/conf.d/proxy-cache.conf          |  53 +++++++++++
2024-07-05 00:46:12,705 [     scc.git] DEBUG  idr/nginx/conf.d/proxy-cachebuster.conf    | 114 ++++++++++++++++++++++++
2024-07-05 00:46:12,707 [     scc.git] DEBUG  idr/nginx/conf.d/proxy-default.conf        | 135 +++++++++++++++++++++++++++++
2024-07-05 00:46:12,707 [     scc.git] DEBUG  idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2024-07-05 00:46:12,707 [     scc.git] DEBUG  idr/nginx/conf.d/proxy-redirect.conf       |  15 ++++
2024-07-05 00:46:12,707 [     scc.git] DEBUG  idr/nginx/conf.d/proxy-upstream.conf       |  13 +++
2024-07-05 00:46:12,707 [     scc.git] DEBUG  idr/nginx/conf.d/proxy-v0.conf             |  26 ++++++
2024-07-05 00:46:12,707 [     scc.git] DEBUG  idr/nginx/conf.d/proxy-v1.conf             |  30 +++++++
2024-07-05 00:46:12,707 [     scc.git] DEBUG  idr/nginx/conf.d/proxy-v2.conf             |  30 +++++++
2024-07-05 00:46:12,708 [     scc.git] DEBUG  idr/nginx/conf.d/proxy-websockets.conf     |   6 ++
2024-07-05 00:46:12,708 [     scc.git] DEBUG  idr/nginx/nginx.conf                       |  53 +++++++++++
2024-07-05 00:46:12,708 [     scc.git] DEBUG  idr/omero/Dockerfile                       |   3 +
2024-07-05 00:46:12,708 [     scc.git] DEBUG  idr/omero/playbook.yml                     |  41 +++++++++
2024-07-05 00:46:12,708 [     scc.git] DEBUG  idr/redirect/Dockerfile                    |   6 ++
2024-07-05 00:46:12,708 [     scc.git] DEBUG  idr/web/Dockerfile                         |   5 ++
2024-07-05 00:46:12,708 [     scc.git] DEBUG  idr/web/playbook.yml                       |  45 ++++++++++
2024-07-05 00:46:12,708 [     scc.git] DEBUG  22 files changed, 824 insertions(+)
2024-07-05 00:46:12,708 [     scc.git] DEBUG  create mode 100644 idr-compose.yml
2024-07-05 00:46:12,708 [     scc.git] DEBUG  create mode 100644 idr-haproxy.yml
2024-07-05 00:46:12,708 [     scc.git] DEBUG  create mode 100755 idr/40-ansible.sh
2024-07-05 00:46:12,708 [     scc.git] DEBUG  create mode 100755 idr/70-reset-password.sh
2024-07-05 00:46:12,708 [     scc.git] DEBUG  create mode 100644 idr/nginx/conf.d/default.conf
2024-07-05 00:46:12,708 [     scc.git] DEBUG  create mode 100644 idr/nginx/conf.d/example_ssl.conf
2024-07-05 00:46:12,708 [     scc.git] DEBUG  create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2024-07-05 00:46:12,708 [     scc.git] DEBUG  create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2024-07-05 00:46:12,708 [     scc.git] DEBUG  create mode 100644 idr/nginx/conf.d/proxy-default.conf
2024-07-05 00:46:12,709 [     scc.git] DEBUG  create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2024-07-05 00:46:12,709 [     scc.git] DEBUG  create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2024-07-05 00:46:12,709 [     scc.git] DEBUG  create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2024-07-05 00:46:12,709 [     scc.git] DEBUG  create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2024-07-05 00:46:12,709 [     scc.git] DEBUG  create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2024-07-05 00:46:12,709 [     scc.git] DEBUG  create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2024-07-05 00:46:12,709 [     scc.git] DEBUG  create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2024-07-05 00:46:12,709 [     scc.git] DEBUG  create mode 100644 idr/nginx/nginx.conf
2024-07-05 00:46:12,709 [     scc.git] DEBUG  create mode 100644 idr/omero/Dockerfile
2024-07-05 00:46:12,709 [     scc.git] DEBUG  create mode 100644 idr/omero/playbook.yml
2024-07-05 00:46:12,709 [     scc.git] DEBUG  create mode 100644 idr/redirect/Dockerfile
2024-07-05 00:46:12,709 [     scc.git] DEBUG  create mode 100644 idr/web/Dockerfile
2024-07-05 00:46:12,709 [     scc.git] DEBUG  create mode 100644 idr/web/playbook.yml
2024-07-05 00:46:12,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:12,867 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-05 00:46:12,920 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:12,921 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:12,929 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-05 00:46:12,971 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-05 00:46:12,982 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec668700> has no local changes
2024-07-05 00:46:12,983 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: openmicroscopy/omero-test-infra
Already up to date.

Merged PRs:
  - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'

Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)'
2024-07-05 00:46:12,994 [     scc.git] DEBUG [detached HEAD 5b12670] merge master -Dorg -Ssuccess-only
2024-07-05 00:46:12,995 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:12,995 [    scc.repo] DEBUG ## PRs found:
2024-07-05 00:46:13,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2
2024-07-05 00:46:13,284 [    scc.repo] DEBUG ## Branches found:
2024-07-05 00:46:13,284 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-07-05 00:46:13,284 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:13,284 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:13,291 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-05 00:46:13,297 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-05 00:46:13,298 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-05 00:46:13,304 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-05 00:46:13,310 [     scc.git] DEBUG Already up to date.

2024-07-05 00:46:13,310 [     scc.git] DEBUG ## Unique users: []
2024-07-05 00:46:13,310 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:13,311 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:13,317 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-05 00:46:13,363 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:13,363 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:13,371 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-05 00:46:13,415 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-05 00:46:13,423 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec64ee50> has no local changes
2024-07-05 00:46:13,423 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-upload
Already up to date.


Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)'
2024-07-05 00:46:13,433 [     scc.git] DEBUG [detached HEAD 195ba14] merge master -Dorg -Ssuccess-only
2024-07-05 00:46:13,434 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:13,434 [    scc.repo] DEBUG ## PRs found:
2024-07-05 00:46:13,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2
2024-07-05 00:46:13,709 [    scc.repo] DEBUG ## Branches found:
2024-07-05 00:46:13,709 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-07-05 00:46:13,709 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:13,709 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:13,716 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-05 00:46:13,722 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-05 00:46:13,722 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-05 00:46:13,730 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-05 00:46:13,737 [     scc.git] DEBUG Already up to date.

2024-07-05 00:46:13,737 [     scc.git] DEBUG ## Unique users: []
2024-07-05 00:46:13,737 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:13,737 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:13,744 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-05 00:46:13,792 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:13,792 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:13,800 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-05 00:46:13,846 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-05 00:46:13,855 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec62c4f0> has no local changes
2024-07-05 00:46:13,855 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-virtual-microscope
Already up to date.


Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)'
2024-07-05 00:46:13,866 [     scc.git] DEBUG [detached HEAD b9c03ec] merge master -Dorg -Ssuccess-only
2024-07-05 00:46:13,867 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:13,867 [     scc.git] INFO  Overriding base-branch from master to main
2024-07-05 00:46:13,867 [    scc.repo] DEBUG ## PRs found:
2024-07-05 00:46:14,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2024-07-05 00:46:14,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2024-07-05 00:46:15,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2024-07-05 00:46:15,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2024-07-05 00:46:16,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-07-05 00:46:16,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-05 00:46:17,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-05 00:46:17,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-07-05 00:46:18,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2024-07-05 00:46:18,003 [    scc.repo] DEBUG   - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-07-05 00:46:18,004 [    scc.repo] DEBUG ## Branches found:
2024-07-05 00:46:18,004 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-07-05 00:46:18,004 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:18,004 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:18,011 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2024-07-05 00:46:18,024 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-05 00:46:18,025 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2024-07-05 00:46:18,039 [     scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2024-07-05 00:46:18,049 [     scc.git] DEBUG Already up to date.

2024-07-05 00:46:18,049 [     scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2024-07-05 00:46:18,477 [     scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2024-07-05 00:46:18,478 [     scc.git] DEBUG  * branch            refs/pull/10/head -> FETCH_HEAD
2024-07-05 00:46:18,483 [     scc.git] DEBUG ## Unique users: []
2024-07-05 00:46:18,483 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:18,483 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:18,491 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-07-05 00:46:18,498 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:18,504 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-07-05 00:46:18,538 [     scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2024-07-05 00:46:18,538 [     scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2024-07-05 00:46:18,538 [     scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-07-05 00:46:18,539 [     scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-07-05 00:46:18,550 [     scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-07-05 00:46:18,562 [     scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0
2024-07-05 00:46:18,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:18,753 [     scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-07-05 00:46:18,766 [     scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-07-05 00:46:18,777 [     scc.git] INFO    - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#116](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/consoleText) for more details.
Possible conflicts:
  - Upstream changes
    - omero_web_zarr/urls.py

--conflicts

2024-07-05 00:46:18,786 [  scc.config] DEBUG Found github.token
2024-07-05 00:46:18,786 [     scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2024-07-05 00:46:18,787 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-05 00:46:18,848 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:18,848 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:18,858 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-05 00:46:18,918 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-05 00:46:18,928 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec5db4f0> has no local changes
2024-07-05 00:46:18,929 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-web-zarr
Excluded PRs:
  - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.

Conflicting PRs (not included):
  - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'

Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)'
2024-07-05 00:46:18,946 [     scc.git] DEBUG [detached HEAD 81143a6] merge master -Dorg -Ssuccess-only
2024-07-05 00:46:18,947 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:18,947 [    scc.repo] DEBUG ## PRs found:
2024-07-05 00:46:19,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2
2024-07-05 00:46:19,199 [    scc.repo] DEBUG ## Branches found:
2024-07-05 00:46:19,199 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-07-05 00:46:19,199 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:19,200 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:19,208 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-05 00:46:19,217 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-05 00:46:19,217 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-05 00:46:19,226 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-05 00:46:19,234 [     scc.git] DEBUG Already up to date.

2024-07-05 00:46:19,234 [     scc.git] DEBUG ## Unique users: []
2024-07-05 00:46:19,234 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:19,234 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:19,241 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-05 00:46:19,287 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:19,287 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:19,294 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-05 00:46:19,340 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-05 00:46:19,347 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec63cf40> has no local changes
2024-07-05 00:46:19,348 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: openmicroscopy/omero-weberror
Already up to date.


Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)'
2024-07-05 00:46:19,358 [     scc.git] DEBUG [detached HEAD 0719e40] merge master -Dorg -Ssuccess-only
2024-07-05 00:46:19,358 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:19,358 [    scc.repo] DEBUG ## PRs found:
2024-07-05 00:46:19,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2
2024-07-05 00:46:19,627 [    scc.repo] DEBUG ## Branches found:
2024-07-05 00:46:19,627 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-07-05 00:46:19,627 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:19,627 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:19,635 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-05 00:46:19,641 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-05 00:46:19,641 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-05 00:46:19,647 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-05 00:46:19,655 [     scc.git] DEBUG Already up to date.

2024-07-05 00:46:19,655 [     scc.git] DEBUG ## Unique users: []
2024-07-05 00:46:19,655 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:19,655 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:19,661 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-05 00:46:19,709 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:19,710 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:19,718 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-05 00:46:19,761 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-05 00:46:19,772 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec605700> has no local changes
2024-07-05 00:46:19,773 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: openmicroscopy/omero-webtest
Already up to date.


Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)'
2024-07-05 00:46:19,783 [     scc.git] DEBUG [detached HEAD fdee7f8] merge master -Dorg -Ssuccess-only
2024-07-05 00:46:19,783 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:19,784 [    scc.repo] DEBUG ## PRs found:
2024-07-05 00:46:20,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2024-07-05 00:46:20,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2024-07-05 00:46:21,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2024-07-05 00:46:21,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-07-05 00:46:22,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-05 00:46:22,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-07-05 00:46:22,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2024-07-05 00:46:22,881 [    scc.repo] DEBUG   - PR 100 dominikl 'Run tests properly'
2024-07-05 00:46:22,881 [    scc.repo] DEBUG ## Branches found:
2024-07-05 00:46:22,881 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-07-05 00:46:22,881 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:22,881 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:22,888 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-05 00:46:22,894 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-05 00:46:22,894 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-05 00:46:22,901 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-05 00:46:22,911 [     scc.git] DEBUG Already up to date.

2024-07-05 00:46:22,911 [     scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2024-07-05 00:46:23,315 [     scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2024-07-05 00:46:23,316 [     scc.git] DEBUG  * branch            refs/pull/100/head -> FETCH_HEAD
2024-07-05 00:46:23,321 [     scc.git] DEBUG ## Unique users: []
2024-07-05 00:46:23,321 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:23,321 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:23,328 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-07-05 00:46:23,336 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:23,343 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-07-05 00:46:23,356 [     scc.git] DEBUG Auto-merging Dockerfile
2024-07-05 00:46:23,357 [     scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2024-07-05 00:46:23,357 [     scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-07-05 00:46:23,357 [     scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-07-05 00:46:23,365 [     scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-07-05 00:46:23,376 [     scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2024-07-05 00:46:23,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:23,539 [     scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-07-05 00:46:23,546 [     scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-07-05 00:46:23,555 [     scc.git] INFO    - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#116](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/consoleText) for more details.
Possible conflicts:
  - Upstream changes
    - Dockerfile

--conflicts

2024-07-05 00:46:23,562 [  scc.config] DEBUG Found github.token
2024-07-05 00:46:23,562 [     scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2024-07-05 00:46:23,563 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-05 00:46:23,616 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:23,617 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:23,625 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-05 00:46:23,679 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-05 00:46:23,691 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec596df0> has no local changes
2024-07-05 00:46:23,692 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/rOMERO-gateway
Already up to date.

Conflicting PRs (not included):
  - PR 100 dominikl 'Run tests properly'

Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)'
2024-07-05 00:46:23,707 [     scc.git] DEBUG [detached HEAD ae0f26a] merge master -Dorg -Ssuccess-only
2024-07-05 00:46:23,707 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:23,708 [     scc.git] INFO  Overriding base-branch from master to develop
2024-07-05 00:46:23,708 [    scc.repo] DEBUG ## PRs found:
2024-07-05 00:46:24,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-07-05 00:46:24,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-07-05 00:46:25,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-07-05 00:46:25,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-07-05 00:46:26,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-07-05 00:46:26,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-07-05 00:46:27,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-07-05 00:46:27,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-07-05 00:46:27,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-05 00:46:28,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-07-05 00:46:28,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-07-05 00:46:28,764 [    scc.repo] DEBUG   - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-07-05 00:46:29,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-07-05 00:46:29,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-07-05 00:46:30,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-07-05 00:46:30,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-07-05 00:46:30,777 [    scc.repo] DEBUG ## Branches found:
2024-07-05 00:46:30,778 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-07-05 00:46:30,778 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:30,778 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:30,784 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-07-05 00:46:30,790 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-05 00:46:30,790 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-07-05 00:46:30,801 [     scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-07-05 00:46:30,811 [     scc.git] DEBUG Already up to date.

2024-07-05 00:46:30,811 [     scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-07-05 00:46:31,241 [     scc.git] DEBUG From https://github.com/ome/scripts
2024-07-05 00:46:31,241 [     scc.git] DEBUG  * branch            refs/pull/202/head -> FETCH_HEAD
2024-07-05 00:46:31,245 [     scc.git] DEBUG ## Unique users: []
2024-07-05 00:46:31,246 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:31,246 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:31,252 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-07-05 00:46:31,259 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:31,266 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-07-05 00:46:31,277 [     scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-07-05 00:46:31,278 [     scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-07-05 00:46:31,278 [     scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-07-05 00:46:31,278 [     scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-07-05 00:46:31,284 [     scc.git] DEBUG Calling 'git reset --hard c20d2734b711c659cecea83db6e2ebd7b7013636'
2024-07-05 00:46:31,292 [     scc.git] DEBUG HEAD is now at c20d273 Merge pull request #221 from imcf/fix-typechecking
2024-07-05 00:46:31,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:31,469 [     scc.git] DEBUG Calling 'git merge-base c20d2734b711c659cecea83db6e2ebd7b7013636 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-07-05 00:46:31,477 [     scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..c20d2734b711c659cecea83db6e2ebd7b7013636'
2024-07-05 00:46:31,483 [     scc.git] INFO    - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#116](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/consoleText) for more details.
Possible conflicts:
  - Upstream changes
    - omero/annotation_scripts/KeyVal_to_csv.py

--conflicts

2024-07-05 00:46:31,489 [  scc.config] DEBUG Found github.token
2024-07-05 00:46:31,489 [     scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-07-05 00:46:31,489 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-05 00:46:31,531 [     scc.git] DEBUG Get sha1 of %s
2024-07-05 00:46:31,531 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-05 00:46:31,537 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-05 00:46:31,579 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-05 00:46:31,587 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ec5f3ee0> has no local changes
2024-07-05 00:46:31,587 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/scripts
Excluded PRs:
  - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
  - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
  - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
  - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.

Conflicting PRs (not included):
  - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'

Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)'
2024-07-05 00:46:31,598 [     scc.git] DEBUG [detached HEAD 4fcec75] merge master -Dorg -Ssuccess-only
2024-07-05 00:46:31,598 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:31,598 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-05 00:46:31,686 [  scc.config] DEBUG Found submodule.minimal-omero-client.url
2024-07-05 00:46:31,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:31,885 [  scc.config] DEBUG Found submodule.minimal-omero-client.branch
2024-07-05 00:46:31,890 [  scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2024-07-05 00:46:32,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:32,303 [  scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2024-07-05 00:46:32,309 [  scc.config] DEBUG Found submodule.omero-cli-render.url
2024-07-05 00:46:32,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:32,726 [  scc.config] DEBUG Found submodule.omero-cli-render.branch
2024-07-05 00:46:32,732 [  scc.config] DEBUG Found submodule.omero-cli-zarr.url
2024-07-05 00:46:33,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:33,148 [  scc.config] DEBUG Found submodule.omero-figure.url
2024-07-05 00:46:33,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:33,561 [  scc.config] DEBUG Found submodule.omero-figure.branch
2024-07-05 00:46:33,567 [  scc.config] DEBUG Found submodule.omero-fpbioimage.url
2024-07-05 00:46:33,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:33,973 [  scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2024-07-05 00:46:33,979 [  scc.config] DEBUG Found submodule.omero-gallery.url
2024-07-05 00:46:34,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:34,389 [  scc.config] DEBUG Found submodule.omero-gallery.branch
2024-07-05 00:46:34,395 [  scc.config] DEBUG Found submodule.omero-iviewer.url
2024-07-05 00:46:34,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:34,801 [  scc.config] DEBUG Found submodule.omero-iviewer.branch
2024-07-05 00:46:34,807 [  scc.config] DEBUG Found submodule.omero-mapr.url
2024-07-05 00:46:35,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:35,216 [  scc.config] DEBUG Found submodule.omero-mapr.branch
2024-07-05 00:46:35,224 [  scc.config] DEBUG Found submodule.omero-metadata.url
2024-07-05 00:46:35,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:35,622 [  scc.config] DEBUG Found submodule.omero-metadata.branch
2024-07-05 00:46:35,628 [  scc.config] DEBUG Found submodule.omero-parade.url
2024-07-05 00:46:36,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:36,023 [  scc.config] DEBUG Found submodule.omero-parade.branch
2024-07-05 00:46:36,029 [  scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2024-07-05 00:46:36,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:36,436 [  scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2024-07-05 00:46:36,445 [  scc.config] DEBUG Found submodule.omero-rois.url
2024-07-05 00:46:36,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:36,851 [  scc.config] DEBUG Found submodule.omero-signup.url
2024-07-05 00:46:37,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:37,261 [  scc.config] DEBUG Found submodule.omero-test-infra.url
2024-07-05 00:46:37,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:37,674 [  scc.config] DEBUG Found submodule.omero-test-infra.branch
2024-07-05 00:46:37,681 [  scc.config] DEBUG Found submodule.omero-upload.url
2024-07-05 00:46:38,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:38,108 [  scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2024-07-05 00:46:38,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:38,524 [  scc.config] DEBUG Found submodule.omero-web-zarr.url
2024-07-05 00:46:38,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:38,928 [  scc.config] DEBUG Found submodule.omero-web-zarr.branch
2024-07-05 00:46:38,936 [  scc.config] DEBUG Found submodule.omero-weberror.url
2024-07-05 00:46:39,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:39,351 [  scc.config] DEBUG Found submodule.omero-weberror.branch
2024-07-05 00:46:39,358 [  scc.config] DEBUG Found submodule.omero-webtest.url
2024-07-05 00:46:39,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:39,770 [  scc.config] DEBUG Found submodule.omero-webtest.branch
2024-07-05 00:46:39,776 [  scc.config] DEBUG Found submodule.rOMERO-gateway.url
2024-07-05 00:46:40,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:40,180 [  scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2024-07-05 00:46:40,186 [  scc.config] DEBUG Found submodule.scripts.url
2024-07-05 00:46:40,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-05 00:46:40,598 [  scc.config] DEBUG Found submodule.scripts.branch
2024-07-05 00:46:40,598 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-05 00:46:40,685 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc3ef7fad60> has local changes
2024-07-05 00:46:40,686 [     scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-plugins
Already up to date.


Repository: ome/minimal-omero-client
Already up to date.


Repository: ome/omero-cli-duplicate
Excluded PRs:
  - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.

Merged PRs:
  - PR 25 jburel 'review message'

Repository: ome/omero-cli-render
Excluded PRs:
  - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
  - PR 54 dominikl 'Change rendering settings spec' (stage: draft)
  - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
  - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft)
Already up to date.

Merged PRs:
  - PR 59 will-moore 'Apply settings to Plate'
  - PR 63 sbesson 'Remove python-future dependency'
  - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition'

Repository: ome/omero-cli-zarr
Excluded PRs:
  - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft)
Already up to date.

Merged PRs:
  - PR 147 will-moore 'Name option'

Conflicting PRs (not included):
  - PR 102 will-moore 'Zarr export tests'
  - PR 123 will-moore 'Support export of Fileset:ID'

Repository: ome/omero-figure
Excluded PRs:
  - PR 575 Tom-TBT 'Label sorting with drag and drop' (user: Tom-TBT)
  - PR 560 will-moore 'Max projection bytes' (exclude comment)
  - PR 543 will-moore 'Plate well labels' (exclude comment)
Already up to date.

Merged PRs:
  - PR 549 will-moore 'Inset feature'
  - PR 555 will-moore 'Points in shape editor'
  - PR 568 will-moore 'Remove numpy from tests_require in setup.py'

Repository: ome/omero-fpbioimage
Already up to date.

Merged PRs:
  - PR 18 jburel 'default  size z value'

Repository: ome/omero-gallery
Already up to date.

Merged PRs:
  - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'

Repository: ome/omero-iviewer
Excluded PRs:
  - PR 420 will-moore 'Add release process to README' (exclude comment)
  - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Already up to date.

Merged PRs:
  - PR 460 will-moore 'Channel min spinner fix'
  - PR 465 will-moore 'Save as Figure'
  - PR 471 will-moore 'Z projection disabled tooltip'
  - PR 477 dependabot[bot] 'Bump ws and socket.io'
  - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5'

Repository: ome/omero-mapr
Excluded PRs:
  - PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.

Merged PRs:
  - PR 74 will-moore 'mapr extension of webclient'

Repository: ome/omero-metadata
Already up to date.

Conflicting PRs (not included):
  - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
  - PR 64 will-moore 'Support images_by_name for Screen and Plate'

Repository: ome/omero-parade
Excluded PRs:
  - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
  - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
  - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.

Merged PRs:
  - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
  - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
  - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'

Repository: ome/omero-prometheus-tools
Already up to date.

Merged PRs:
  - PR 14 jburel 'use conda-forge channel'

Repository: ome/omero-rois
Excluded PRs:
  - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.

Merged PRs:
  - PR 6 dominikl 'Add method to create masks grouped by label id'

Repository: ome/omero-signup
Already up to date.

Conflicting PRs (not included):
  - PR 14 manics 'Add pre-commit (black, flake8)'

Repository: openmicroscopy/omero-test-infra
Already up to date.

Merged PRs:
  - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'

Repository: ome/omero-upload
Already up to date.


Repository: ome/omero-virtual-microscope
Already up to date.


Repository: ome/omero-web-zarr
Excluded PRs:
  - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.

Conflicting PRs (not included):
  - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'

Repository: openmicroscopy/omero-weberror
Already up to date.


Repository: openmicroscopy/omero-webtest
Already up to date.


Repository: ome/rOMERO-gateway
Already up to date.

Conflicting PRs (not included):
  - PR 100 dominikl 'Run tests properly'

Repository: ome/scripts
Excluded PRs:
  - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
  - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
  - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
  - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.

Conflicting PRs (not included):
  - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'

Generated by OMERO-plugins-push#116 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/116/)'
2024-07-05 00:46:40,703 [     scc.git] DEBUG [detached HEAD 2229f5c] merge master -Dorg -Ssuccess-only
2024-07-05 00:46:40,704 [     scc.git] DEBUG  23 files changed, 44 insertions(+), 44 deletions(-)
2024-07-05 00:46:40,704 [   scc.merge] INFO  Repository: ome/omero-plugins
2024-07-05 00:46:40,704 [   scc.merge] INFO  Already up to date.
2024-07-05 00:46:40,704 [   scc.merge] INFO  
2024-07-05 00:46:40,704 [   scc.merge] INFO  
2024-07-05 00:46:40,704 [   scc.merge] INFO  Repository: ome/minimal-omero-client
2024-07-05 00:46:40,704 [   scc.merge] INFO  Already up to date.
2024-07-05 00:46:40,704 [   scc.merge] INFO  
2024-07-05 00:46:40,704 [   scc.merge] INFO  
2024-07-05 00:46:40,704 [   scc.merge] INFO  Repository: ome/omero-cli-duplicate
2024-07-05 00:46:40,704 [   scc.merge] INFO  Excluded PRs:
2024-07-05 00:46:40,704 [   scc.merge] INFO    - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2024-07-05 00:46:40,704 [   scc.merge] INFO  Already up to date.
2024-07-05 00:46:40,704 [   scc.merge] INFO  
2024-07-05 00:46:40,705 [   scc.merge] INFO  Merged PRs:
2024-07-05 00:46:40,705 [   scc.merge] INFO    - PR 25 jburel 'review message'
2024-07-05 00:46:40,705 [   scc.merge] INFO  
2024-07-05 00:46:40,705 [   scc.merge] INFO  Repository: ome/omero-cli-render
2024-07-05 00:46:40,705 [   scc.merge] INFO  Excluded PRs:
2024-07-05 00:46:40,705 [   scc.merge] INFO    - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
2024-07-05 00:46:40,705 [   scc.merge] INFO    - PR 54 dominikl 'Change rendering settings spec' (stage: draft)
2024-07-05 00:46:40,705 [   scc.merge] INFO    - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2024-07-05 00:46:40,705 [   scc.merge] INFO    - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft)
2024-07-05 00:46:40,705 [   scc.merge] INFO  Already up to date.
2024-07-05 00:46:40,705 [   scc.merge] INFO  
2024-07-05 00:46:40,705 [   scc.merge] INFO  Merged PRs:
2024-07-05 00:46:40,705 [   scc.merge] INFO    - PR 59 will-moore 'Apply settings to Plate'
2024-07-05 00:46:40,705 [   scc.merge] INFO    - PR 63 sbesson 'Remove python-future dependency'
2024-07-05 00:46:40,705 [   scc.merge] INFO    - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition'
2024-07-05 00:46:40,705 [   scc.merge] INFO  
2024-07-05 00:46:40,705 [   scc.merge] INFO  Repository: ome/omero-cli-zarr
2024-07-05 00:46:40,705 [   scc.merge] INFO  Excluded PRs:
2024-07-05 00:46:40,705 [   scc.merge] INFO    - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft)
2024-07-05 00:46:40,705 [   scc.merge] INFO  Already up to date.
2024-07-05 00:46:40,705 [   scc.merge] INFO  
2024-07-05 00:46:40,705 [   scc.merge] INFO  Merged PRs:
2024-07-05 00:46:40,705 [   scc.merge] INFO    - PR 147 will-moore 'Name option'
2024-07-05 00:46:40,705 [   scc.merge] INFO  
2024-07-05 00:46:40,705 [   scc.merge] INFO  Conflicting PRs (not included):
2024-07-05 00:46:40,705 [   scc.merge] INFO    - PR 102 will-moore 'Zarr export tests'
2024-07-05 00:46:40,705 [   scc.merge] INFO    - PR 123 will-moore 'Support export of Fileset:ID'
2024-07-05 00:46:40,705 [   scc.merge] INFO  
2024-07-05 00:46:40,705 [   scc.merge] INFO  Repository: ome/omero-figure
2024-07-05 00:46:40,705 [   scc.merge] INFO  Excluded PRs:
2024-07-05 00:46:40,705 [   scc.merge] INFO    - PR 575 Tom-TBT 'Label sorting with drag and drop' (user: Tom-TBT)
2024-07-05 00:46:40,705 [   scc.merge] INFO    - PR 560 will-moore 'Max projection bytes' (exclude comment)
2024-07-05 00:46:40,705 [   scc.merge] INFO    - PR 543 will-moore 'Plate well labels' (exclude comment)
2024-07-05 00:46:40,705 [   scc.merge] INFO  Already up to date.
2024-07-05 00:46:40,705 [   scc.merge] INFO  
2024-07-05 00:46:40,705 [   scc.merge] INFO  Merged PRs:
2024-07-05 00:46:40,705 [   scc.merge] INFO    - PR 549 will-moore 'Inset feature'
2024-07-05 00:46:40,705 [   scc.merge] INFO    - PR 555 will-moore 'Points in shape editor'
2024-07-05 00:46:40,706 [   scc.merge] INFO    - PR 568 will-moore 'Remove numpy from tests_require in setup.py'
2024-07-05 00:46:40,706 [   scc.merge] INFO  
2024-07-05 00:46:40,706 [   scc.merge] INFO  Repository: ome/omero-fpbioimage
2024-07-05 00:46:40,706 [   scc.merge] INFO  Already up to date.
2024-07-05 00:46:40,706 [   scc.merge] INFO  
2024-07-05 00:46:40,706 [   scc.merge] INFO  Merged PRs:
2024-07-05 00:46:40,706 [   scc.merge] INFO    - PR 18 jburel 'default  size z value'
2024-07-05 00:46:40,706 [   scc.merge] INFO  
2024-07-05 00:46:40,706 [   scc.merge] INFO  Repository: ome/omero-gallery
2024-07-05 00:46:40,706 [   scc.merge] INFO  Already up to date.
2024-07-05 00:46:40,706 [   scc.merge] INFO  
2024-07-05 00:46:40,706 [   scc.merge] INFO  Merged PRs:
2024-07-05 00:46:40,706 [   scc.merge] INFO    - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'
2024-07-05 00:46:40,706 [   scc.merge] INFO  
2024-07-05 00:46:40,706 [   scc.merge] INFO  Repository: ome/omero-iviewer
2024-07-05 00:46:40,706 [   scc.merge] INFO  Excluded PRs:
2024-07-05 00:46:40,706 [   scc.merge] INFO    - PR 420 will-moore 'Add release process to README' (exclude comment)
2024-07-05 00:46:40,706 [   scc.merge] INFO    - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2024-07-05 00:46:40,706 [   scc.merge] INFO  Already up to date.
2024-07-05 00:46:40,706 [   scc.merge] INFO  
2024-07-05 00:46:40,706 [   scc.merge] INFO  Merged PRs:
2024-07-05 00:46:40,706 [   scc.merge] INFO    - PR 460 will-moore 'Channel min spinner fix'
2024-07-05 00:46:40,706 [   scc.merge] INFO    - PR 465 will-moore 'Save as Figure'
2024-07-05 00:46:40,706 [   scc.merge] INFO    - PR 471 will-moore 'Z projection disabled tooltip'
2024-07-05 00:46:40,706 [   scc.merge] INFO    - PR 477 dependabot[bot] 'Bump ws and socket.io'
2024-07-05 00:46:40,706 [   scc.merge] INFO    - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5'
2024-07-05 00:46:40,706 [   scc.merge] INFO  
2024-07-05 00:46:40,706 [   scc.merge] INFO  Repository: ome/omero-mapr
2024-07-05 00:46:40,706 [   scc.merge] INFO  Excluded PRs:
2024-07-05 00:46:40,706 [   scc.merge] INFO    - PR 79 will-moore 'Right panel title' (exclude comment)
2024-07-05 00:46:40,706 [   scc.merge] INFO  Already up to date.
2024-07-05 00:46:40,706 [   scc.merge] INFO  
2024-07-05 00:46:40,706 [   scc.merge] INFO  Merged PRs:
2024-07-05 00:46:40,706 [   scc.merge] INFO    - PR 74 will-moore 'mapr extension of webclient'
2024-07-05 00:46:40,706 [   scc.merge] INFO  
2024-07-05 00:46:40,706 [   scc.merge] INFO  Repository: ome/omero-metadata
2024-07-05 00:46:40,707 [   scc.merge] INFO  Already up to date.
2024-07-05 00:46:40,707 [   scc.merge] INFO  
2024-07-05 00:46:40,707 [   scc.merge] INFO  Conflicting PRs (not included):
2024-07-05 00:46:40,707 [   scc.merge] INFO    - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-07-05 00:46:40,707 [   scc.merge] INFO    - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-07-05 00:46:40,707 [   scc.merge] INFO  
2024-07-05 00:46:40,707 [   scc.merge] INFO  Repository: ome/omero-parade
2024-07-05 00:46:40,707 [   scc.merge] INFO  Excluded PRs:
2024-07-05 00:46:40,707 [   scc.merge] INFO    - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2024-07-05 00:46:40,707 [   scc.merge] INFO    - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2024-07-05 00:46:40,707 [   scc.merge] INFO    - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2024-07-05 00:46:40,707 [   scc.merge] INFO  Already up to date.
2024-07-05 00:46:40,707 [   scc.merge] INFO  
2024-07-05 00:46:40,707 [   scc.merge] INFO  Merged PRs:
2024-07-05 00:46:40,707 [   scc.merge] INFO    - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
2024-07-05 00:46:40,707 [   scc.merge] INFO    - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
2024-07-05 00:46:40,707 [   scc.merge] INFO    - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
2024-07-05 00:46:40,707 [   scc.merge] INFO  
2024-07-05 00:46:40,707 [   scc.merge] INFO  Repository: ome/omero-prometheus-tools
2024-07-05 00:46:40,707 [   scc.merge] INFO  Already up to date.
2024-07-05 00:46:40,707 [   scc.merge] INFO  
2024-07-05 00:46:40,707 [   scc.merge] INFO  Merged PRs:
2024-07-05 00:46:40,707 [   scc.merge] INFO    - PR 14 jburel 'use conda-forge channel'
2024-07-05 00:46:40,707 [   scc.merge] INFO  
2024-07-05 00:46:40,707 [   scc.merge] INFO  Repository: ome/omero-rois
2024-07-05 00:46:40,707 [   scc.merge] INFO  Excluded PRs:
2024-07-05 00:46:40,707 [   scc.merge] INFO    - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-07-05 00:46:40,707 [   scc.merge] INFO  Already up to date.
2024-07-05 00:46:40,707 [   scc.merge] INFO  
2024-07-05 00:46:40,707 [   scc.merge] INFO  Merged PRs:
2024-07-05 00:46:40,707 [   scc.merge] INFO    - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-07-05 00:46:40,707 [   scc.merge] INFO  
2024-07-05 00:46:40,707 [   scc.merge] INFO  Repository: ome/omero-signup
2024-07-05 00:46:40,707 [   scc.merge] INFO  Already up to date.
2024-07-05 00:46:40,707 [   scc.merge] INFO  
2024-07-05 00:46:40,707 [   scc.merge] INFO  Conflicting PRs (not included):
2024-07-05 00:46:40,708 [   scc.merge] INFO    - PR 14 manics 'Add pre-commit (black, flake8)'
2024-07-05 00:46:40,708 [   scc.merge] INFO  
2024-07-05 00:46:40,708 [   scc.merge] INFO  Repository: openmicroscopy/omero-test-infra
2024-07-05 00:46:40,708 [   scc.merge] INFO  Already up to date.
2024-07-05 00:46:40,708 [   scc.merge] INFO  
2024-07-05 00:46:40,708 [   scc.merge] INFO  Merged PRs:
2024-07-05 00:46:40,708 [   scc.merge] INFO    - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-07-05 00:46:40,708 [   scc.merge] INFO  
2024-07-05 00:46:40,708 [   scc.merge] INFO  Repository: ome/omero-upload
2024-07-05 00:46:40,708 [   scc.merge] INFO  Already up to date.
2024-07-05 00:46:40,708 [   scc.merge] INFO  
2024-07-05 00:46:40,708 [   scc.merge] INFO  
2024-07-05 00:46:40,708 [   scc.merge] INFO  Repository: ome/omero-virtual-microscope
2024-07-05 00:46:40,708 [   scc.merge] INFO  Already up to date.
2024-07-05 00:46:40,708 [   scc.merge] INFO  
2024-07-05 00:46:40,708 [   scc.merge] INFO  
2024-07-05 00:46:40,708 [   scc.merge] INFO  Repository: ome/omero-web-zarr
2024-07-05 00:46:40,708 [   scc.merge] INFO  Excluded PRs:
2024-07-05 00:46:40,708 [   scc.merge] INFO    - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2024-07-05 00:46:40,708 [   scc.merge] INFO  Already up to date.
2024-07-05 00:46:40,708 [   scc.merge] INFO  
2024-07-05 00:46:40,708 [   scc.merge] INFO  Conflicting PRs (not included):
2024-07-05 00:46:40,708 [   scc.merge] INFO    - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-07-05 00:46:40,708 [   scc.merge] INFO  
2024-07-05 00:46:40,708 [   scc.merge] INFO  Repository: openmicroscopy/omero-weberror
2024-07-05 00:46:40,708 [   scc.merge] INFO  Already up to date.
2024-07-05 00:46:40,708 [   scc.merge] INFO  
2024-07-05 00:46:40,708 [   scc.merge] INFO  
2024-07-05 00:46:40,708 [   scc.merge] INFO  Repository: openmicroscopy/omero-webtest
2024-07-05 00:46:40,708 [   scc.merge] INFO  Already up to date.
2024-07-05 00:46:40,708 [   scc.merge] INFO  
2024-07-05 00:46:40,708 [   scc.merge] INFO  
2024-07-05 00:46:40,708 [   scc.merge] INFO  Repository: ome/rOMERO-gateway
2024-07-05 00:46:40,708 [   scc.merge] INFO  Already up to date.
2024-07-05 00:46:40,708 [   scc.merge] INFO  
2024-07-05 00:46:40,708 [   scc.merge] INFO  Conflicting PRs (not included):
2024-07-05 00:46:40,708 [   scc.merge] INFO    - PR 100 dominikl 'Run tests properly'
2024-07-05 00:46:40,709 [   scc.merge] INFO  
2024-07-05 00:46:40,709 [   scc.merge] INFO  Repository: ome/scripts
2024-07-05 00:46:40,709 [   scc.merge] INFO  Excluded PRs:
2024-07-05 00:46:40,709 [   scc.merge] INFO    - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-07-05 00:46:40,709 [   scc.merge] INFO    - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-07-05 00:46:40,709 [   scc.merge] INFO    - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-07-05 00:46:40,709 [   scc.merge] INFO    - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-07-05 00:46:40,709 [   scc.merge] INFO  Already up to date.
2024-07-05 00:46:40,709 [   scc.merge] INFO  
2024-07-05 00:46:40,709 [   scc.merge] INFO  Conflicting PRs (not included):
2024-07-05 00:46:40,709 [   scc.merge] INFO    - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-07-05 00:46:40,709 [   scc.merge] INFO  
2024-07-05 00:46:40,709 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-07-05 00:46:40,709 [     scc.git] DEBUG Calling 'git remote'
2024-07-05 00:46:40,716 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2024-07-05 00:46:40,716 [     scc.git] DEBUG Calling 'git remote'
2024-07-05 00:46:40,723 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:40,724 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2024-07-05 00:46:40,724 [     scc.git] DEBUG Calling 'git remote'
2024-07-05 00:46:40,731 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:40,731 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2024-07-05 00:46:40,731 [     scc.git] DEBUG Calling 'git remote'
2024-07-05 00:46:40,738 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:40,739 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2024-07-05 00:46:40,739 [     scc.git] DEBUG Calling 'git remote'
2024-07-05 00:46:40,748 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:40,748 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2024-07-05 00:46:40,748 [     scc.git] DEBUG Calling 'git remote'
2024-07-05 00:46:40,754 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:40,754 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2024-07-05 00:46:40,754 [     scc.git] DEBUG Calling 'git remote'
2024-07-05 00:46:40,762 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:40,762 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-07-05 00:46:40,762 [     scc.git] DEBUG Calling 'git remote'
2024-07-05 00:46:40,770 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:40,770 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-07-05 00:46:40,770 [     scc.git] DEBUG Calling 'git remote'
2024-07-05 00:46:40,777 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:40,778 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-07-05 00:46:40,778 [     scc.git] DEBUG Calling 'git remote'
2024-07-05 00:46:40,785 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:40,785 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-07-05 00:46:40,785 [     scc.git] DEBUG Calling 'git remote'
2024-07-05 00:46:40,794 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:40,794 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-07-05 00:46:40,794 [     scc.git] DEBUG Calling 'git remote'
2024-07-05 00:46:40,800 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:40,801 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-07-05 00:46:40,801 [     scc.git] DEBUG Calling 'git remote'
2024-07-05 00:46:40,807 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:40,808 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-07-05 00:46:40,808 [     scc.git] DEBUG Calling 'git remote'
2024-07-05 00:46:40,814 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:40,815 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-07-05 00:46:40,815 [     scc.git] DEBUG Calling 'git remote'
2024-07-05 00:46:40,823 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:40,823 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-07-05 00:46:40,823 [     scc.git] DEBUG Calling 'git remote'
2024-07-05 00:46:40,831 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:40,831 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-07-05 00:46:40,832 [     scc.git] DEBUG Calling 'git remote'
2024-07-05 00:46:40,840 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:40,841 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-07-05 00:46:40,841 [     scc.git] DEBUG Calling 'git remote'
2024-07-05 00:46:40,850 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:40,850 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-07-05 00:46:40,850 [     scc.git] DEBUG Calling 'git remote'
2024-07-05 00:46:40,858 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:40,858 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-07-05 00:46:40,858 [     scc.git] DEBUG Calling 'git remote'
2024-07-05 00:46:40,863 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:40,863 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-07-05 00:46:40,863 [     scc.git] DEBUG Calling 'git remote'
2024-07-05 00:46:40,868 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:40,868 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-07-05 00:46:40,868 [     scc.git] DEBUG Calling 'git remote'
2024-07-05 00:46:40,882 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-05 00:46:40,882 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-07-05 00:46:40,882 [     scc.git] DEBUG Calling 'git remote'
2024-07-05 00:46:40,890 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: The wheel package is not available.
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/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
  warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
  warnings.warn(tmpl.format(**locals()))
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.9.1 to 5.9.2-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD 06fe94a] Update component versions
 1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
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Entering 'omero-cli-render'
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Entering 'omero-cli-zarr'
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Untracked files:
  (use "git add <file>..." to include in what will be committed)
	.eggs/

nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
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Entering 'omero-fpbioimage'
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Entering 'omero-gallery'
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Entering 'omero-test-infra'
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[detached HEAD 46db43f] Update component versions
 1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2024-07-05 00:47:29,929 [github.Reque] INFO  Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2024-07-05 00:47:38,978 [github.Reque] INFO  Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2024-07-05 00:47:41,312 [github.Reque] INFO  Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-07-05 00:47:45,896 [github.Reque] INFO  Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-07-05 00:48:35,846 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci