![[Jenkins]](/jenkins/static/28c89a1b/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 137 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 296246fd4b5f1e18329dee48f3211ab7ee23ee7c (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 296246fd4b5f1e18329dee48f3211ab7ee23ee7c # timeout=10 Commit message: "Merge pull request #382 from ome/dependabot/submodules/omero-figure-fefe87c" > git rev-list --no-walk 296246fd4b5f1e18329dee48f3211ab7ee23ee7c # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 119 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.1.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.1.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.19-py2.py3-none-any.whl.metadata (49 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.7.4-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.19-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.7.4-py3-none-any.whl (162 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl (3.9 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.7.4 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.8 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.19 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-07-14 00:40:36,536 [ scc.config] DEBUG Found github.token 2024-07-14 00:40:36,538 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-07-14 00:40:36,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:40:37,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:40:37,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-07-14 00:40:37,639 [ scc.gh] DEBUG 4649 remaining from 5000 (Reset at 01:07 2024-07-14 00:40:37,639 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-14 00:40:37,644 [ scc.git] DEBUG Check current status 2024-07-14 00:40:37,644 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-14 00:40:37,648 [ scc.git] DEBUG 296246f Merge pull request #382 from ome/dependabot/submodules/omero-figure-fefe87c 2024-07-14 00:40:37,648 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-14 00:40:37,699 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-07-14 00:40:37,701 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-07-14 00:40:37,704 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-07-14 00:40:37,707 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-07-14 00:40:38,389 [ scc.git] DEBUG fefe87cffc62034eb6bf0f596f2eea4937e9bd4e omero-figure (v7.0.0-13-gfefe87cf) 2024-07-14 00:40:38,395 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-07-14 00:40:38,398 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-07-14 00:40:38,412 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-07-14 00:40:38,431 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-07-14 00:40:38,434 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-07-14 00:40:38,437 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-07-14 00:40:38,440 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-07-14 00:40:38,443 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-07-14 00:40:38,445 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-07-14 00:40:38,463 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-07-14 00:40:38,465 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-07-14 00:40:38,469 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-07-14 00:40:38,472 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-07-14 00:40:38,475 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-07-14 00:40:38,477 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-07-14 00:40:38,480 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-07-14 00:40:38,483 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-07-14 00:40:38,488 [ scc.config] DEBUG Found remote.origin.url 2024-07-14 00:40:38,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-07-14 00:40:39,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-14 00:40:39,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-14 00:40:40,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-14 00:40:40,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-14 00:40:40,459 [ scc.git] DEBUG Resetting... 2024-07-14 00:40:40,459 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-07-14 00:40:40,469 [ scc.git] DEBUG HEAD is now at 296246f Merge pull request #382 from ome/dependabot/submodules/omero-figure-fefe87c 2024-07-14 00:40:40,469 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-07-14 00:40:40,574 [ scc.git] DEBUG Check current status 2024-07-14 00:40:40,574 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-14 00:40:40,578 [ scc.git] DEBUG 296246f Merge pull request #382 from ome/dependabot/submodules/omero-figure-fefe87c 2024-07-14 00:40:40,578 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-14 00:40:40,627 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-07-14 00:40:40,629 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-07-14 00:40:40,633 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-07-14 00:40:40,636 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-07-14 00:40:40,643 [ scc.git] DEBUG fefe87cffc62034eb6bf0f596f2eea4937e9bd4e omero-figure (v7.0.0-13-gfefe87cf) 2024-07-14 00:40:40,646 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-07-14 00:40:40,649 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-07-14 00:40:40,653 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-07-14 00:40:40,656 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-07-14 00:40:40,659 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-07-14 00:40:40,662 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-07-14 00:40:40,664 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-07-14 00:40:40,667 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-07-14 00:40:40,670 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-07-14 00:40:40,673 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-07-14 00:40:40,676 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-07-14 00:40:40,678 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-07-14 00:40:40,681 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-07-14 00:40:40,684 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-07-14 00:40:40,687 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-07-14 00:40:40,690 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-07-14 00:40:40,694 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-07-14 00:40:40,695 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-07-14 00:40:40,695 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-07-14 00:40:40,695 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-07-14 00:40:40,695 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-07-14 00:40:40,695 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-07-14 00:40:40,695 [ scc.repo] DEBUG ## PRs found: 2024-07-14 00:40:40,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-07-14 00:40:40,891 [ scc.repo] DEBUG ## Branches found: 2024-07-14 00:40:40,891 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:40:40,891 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:40:40,896 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-14 00:40:40,900 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-14 00:40:40,900 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-14 00:40:40,911 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-14 00:40:40,915 [ scc.git] DEBUG Already up to date. 2024-07-14 00:40:40,915 [ scc.git] DEBUG ## Unique users: [] 2024-07-14 00:40:40,916 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:40:40,916 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:40:40,919 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-14 00:40:40,971 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:40:40,971 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:40:40,976 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-14 00:40:41,859 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f99b2c68d60> has no local changes 2024-07-14 00:40:41,860 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Generated by OMERO-plugins-push#122 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/)' 2024-07-14 00:40:41,933 [ scc.git] DEBUG [detached HEAD a68f6c1] merge master -Dorg -Snone 2024-07-14 00:40:41,933 [ scc.merge] INFO Repository: ome/omero-plugins 2024-07-14 00:40:41,933 [ scc.merge] INFO Already up to date. 2024-07-14 00:40:41,933 [ scc.merge] INFO 2024-07-14 00:40:41,934 [ scc.merge] INFO 2024-07-14 00:40:41,934 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-07-14 00:40:41,934 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-07-14 00:40:50,918 [ scc.config] DEBUG Found github.token 2024-07-14 00:40:50,921 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-07-14 00:40:51,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:40:51,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:40:51,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-07-14 00:40:51,973 [ scc.gh] DEBUG 4641 remaining from 5000 (Reset at 01:07 2024-07-14 00:40:51,974 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-14 00:40:51,978 [ scc.git] DEBUG Check current status 2024-07-14 00:40:51,978 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-14 00:40:51,981 [ scc.git] DEBUG a68f6c1 merge master -Dorg -Snone 2024-07-14 00:40:51,982 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-14 00:40:52,029 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-07-14 00:40:52,031 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-07-14 00:40:52,034 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-07-14 00:40:52,037 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-07-14 00:40:52,045 [ scc.git] DEBUG fefe87cffc62034eb6bf0f596f2eea4937e9bd4e omero-figure (v7.0.0-13-gfefe87cf) 2024-07-14 00:40:52,048 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-07-14 00:40:52,051 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-07-14 00:40:52,054 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-07-14 00:40:52,057 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-07-14 00:40:52,060 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-07-14 00:40:52,064 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-07-14 00:40:52,067 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-07-14 00:40:52,070 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-07-14 00:40:52,073 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-07-14 00:40:52,077 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-07-14 00:40:52,080 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-07-14 00:40:52,083 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-07-14 00:40:52,085 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-07-14 00:40:52,088 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-07-14 00:40:52,090 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-07-14 00:40:52,093 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-07-14 00:40:52,097 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-07-14 00:40:52,101 [ scc.config] DEBUG Found remote.origin.url 2024-07-14 00:40:52,102 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-07-14 00:40:52,105 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-07-14 00:40:52,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-07-14 00:40:52,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-14 00:40:53,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-14 00:40:53,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-14 00:40:54,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-14 00:40:54,212 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:40:54,282 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-07-14 00:40:54,283 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-14 00:40:54,287 [ scc.git] DEBUG Check current status 2024-07-14 00:40:54,287 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-14 00:40:54,290 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-07-14 00:40:54,291 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-14 00:40:54,335 [ scc.config] DEBUG Found remote.origin.url 2024-07-14 00:40:54,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-07-14 00:40:55,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-14 00:40:55,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-14 00:40:56,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-14 00:40:56,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-14 00:40:56,431 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:40:56,469 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:40:56,470 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-07-14 00:40:56,470 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-14 00:40:56,474 [ scc.git] DEBUG Check current status 2024-07-14 00:40:56,474 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-14 00:40:56,478 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-07-14 00:40:56,478 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-14 00:40:56,521 [ scc.config] DEBUG Found remote.origin.url 2024-07-14 00:40:56,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-07-14 00:40:57,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-14 00:40:57,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-14 00:40:58,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-14 00:40:58,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-14 00:40:58,718 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:40:58,758 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:40:58,759 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-07-14 00:40:58,759 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-14 00:40:58,763 [ scc.git] DEBUG Check current status 2024-07-14 00:40:58,764 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-14 00:40:58,767 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-07-14 00:40:58,768 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-14 00:40:58,809 [ scc.config] DEBUG Found remote.origin.url 2024-07-14 00:40:59,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-07-14 00:40:59,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-14 00:41:00,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-14 00:41:00,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-14 00:41:00,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-14 00:41:00,998 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:41:01,038 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:41:01,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-07-14 00:41:01,039 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-14 00:41:01,044 [ scc.git] DEBUG Check current status 2024-07-14 00:41:01,044 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-14 00:41:01,048 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-07-14 00:41:01,048 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-14 00:41:01,093 [ scc.config] DEBUG Found remote.origin.url 2024-07-14 00:41:01,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-07-14 00:41:01,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-14 00:41:02,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-14 00:41:02,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-14 00:41:03,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-14 00:41:03,222 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:41:03,267 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:41:03,268 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-07-14 00:41:03,268 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-14 00:41:03,272 [ scc.git] DEBUG Check current status 2024-07-14 00:41:03,272 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-14 00:41:03,288 [ scc.git] DEBUG fefe87cf Merge pull request #575 from Tom-TBT/labelsort 2024-07-14 00:41:03,289 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-14 00:41:03,337 [ scc.config] DEBUG Found remote.origin.url 2024-07-14 00:41:03,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-07-14 00:41:04,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-14 00:41:04,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-14 00:41:05,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-14 00:41:05,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-14 00:41:05,425 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:41:05,465 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:41:05,466 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-07-14 00:41:05,466 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-14 00:41:05,471 [ scc.git] DEBUG Check current status 2024-07-14 00:41:05,471 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-14 00:41:05,475 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-07-14 00:41:05,476 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-14 00:41:05,521 [ scc.config] DEBUG Found remote.origin.url 2024-07-14 00:41:05,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-07-14 00:41:06,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-14 00:41:06,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-14 00:41:07,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-14 00:41:07,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-14 00:41:07,598 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:41:07,645 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:41:07,646 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-07-14 00:41:07,646 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-14 00:41:07,651 [ scc.git] DEBUG Check current status 2024-07-14 00:41:07,651 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-14 00:41:07,656 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-07-14 00:41:07,656 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-14 00:41:07,702 [ scc.config] DEBUG Found remote.origin.url 2024-07-14 00:41:08,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-07-14 00:41:08,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-14 00:41:08,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-14 00:41:09,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-14 00:41:09,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-14 00:41:09,798 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:41:09,838 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:41:09,840 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-07-14 00:41:09,840 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-14 00:41:09,844 [ scc.git] DEBUG Check current status 2024-07-14 00:41:09,844 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-14 00:41:09,848 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-07-14 00:41:09,849 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-14 00:41:09,894 [ scc.config] DEBUG Found remote.origin.url 2024-07-14 00:41:10,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-07-14 00:41:10,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-14 00:41:11,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-14 00:41:11,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-14 00:41:12,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-14 00:41:12,057 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:41:12,096 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:41:12,097 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-07-14 00:41:12,097 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-14 00:41:12,102 [ scc.git] DEBUG Check current status 2024-07-14 00:41:12,102 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-14 00:41:12,107 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-07-14 00:41:12,107 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-14 00:41:12,150 [ scc.config] DEBUG Found remote.origin.url 2024-07-14 00:41:12,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-07-14 00:41:12,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-14 00:41:13,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-14 00:41:13,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-14 00:41:14,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-14 00:41:14,199 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:41:14,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:41:14,245 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-07-14 00:41:14,245 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-14 00:41:14,251 [ scc.git] DEBUG Check current status 2024-07-14 00:41:14,251 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-14 00:41:14,255 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-07-14 00:41:14,256 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-14 00:41:14,303 [ scc.config] DEBUG Found remote.origin.url 2024-07-14 00:41:14,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-07-14 00:41:15,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-14 00:41:15,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-14 00:41:15,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-14 00:41:16,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-14 00:41:16,406 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:41:16,447 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:41:16,448 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-07-14 00:41:16,448 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-14 00:41:16,454 [ scc.git] DEBUG Check current status 2024-07-14 00:41:16,454 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-14 00:41:16,458 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-07-14 00:41:16,458 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-14 00:41:16,501 [ scc.config] DEBUG Found remote.origin.url 2024-07-14 00:41:16,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-07-14 00:41:17,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-14 00:41:17,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-14 00:41:18,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-14 00:41:18,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-14 00:41:18,603 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:41:18,644 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:41:18,645 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-07-14 00:41:18,645 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-14 00:41:18,649 [ scc.git] DEBUG Check current status 2024-07-14 00:41:18,649 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-14 00:41:18,653 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-07-14 00:41:18,654 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-14 00:41:18,700 [ scc.config] DEBUG Found remote.origin.url 2024-07-14 00:41:19,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-07-14 00:41:19,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-14 00:41:19,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-14 00:41:20,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-14 00:41:20,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-14 00:41:20,853 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:41:20,898 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:41:20,899 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-07-14 00:41:20,899 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-14 00:41:20,903 [ scc.git] DEBUG Check current status 2024-07-14 00:41:20,903 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-14 00:41:20,908 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-07-14 00:41:20,908 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-14 00:41:20,966 [ scc.config] DEBUG Found remote.origin.url 2024-07-14 00:41:21,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-07-14 00:41:21,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-14 00:41:22,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-14 00:41:22,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-14 00:41:23,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-14 00:41:23,138 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:41:23,184 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:41:23,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-07-14 00:41:23,185 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-14 00:41:23,190 [ scc.git] DEBUG Check current status 2024-07-14 00:41:23,191 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-14 00:41:23,196 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-07-14 00:41:23,196 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-14 00:41:23,241 [ scc.config] DEBUG Found remote.origin.url 2024-07-14 00:41:23,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-07-14 00:41:24,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-14 00:41:24,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-14 00:41:24,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-14 00:41:25,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-14 00:41:25,314 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:41:25,365 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:41:25,366 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-07-14 00:41:25,366 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-14 00:41:25,371 [ scc.git] DEBUG Check current status 2024-07-14 00:41:25,372 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-14 00:41:25,376 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-07-14 00:41:25,376 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-14 00:41:25,418 [ scc.config] DEBUG Found remote.origin.url 2024-07-14 00:41:25,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-07-14 00:41:25,738 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-07-14 00:41:25,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-07-14 00:41:26,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-14 00:41:26,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-14 00:41:27,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-14 00:41:27,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-14 00:41:27,748 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:41:27,790 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:41:27,791 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-07-14 00:41:27,791 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-14 00:41:27,796 [ scc.git] DEBUG Check current status 2024-07-14 00:41:27,796 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-14 00:41:27,801 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-07-14 00:41:27,801 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-14 00:41:27,847 [ scc.config] DEBUG Found remote.origin.url 2024-07-14 00:41:28,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-07-14 00:41:28,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-14 00:41:29,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-14 00:41:29,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-14 00:41:29,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-14 00:41:29,982 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:41:30,025 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:41:30,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-07-14 00:41:30,026 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-14 00:41:30,031 [ scc.git] DEBUG Check current status 2024-07-14 00:41:30,031 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-14 00:41:30,036 [ scc.git] DEBUG deab817 update setup-python to v4 2024-07-14 00:41:30,036 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-14 00:41:30,079 [ scc.config] DEBUG Found remote.origin.url 2024-07-14 00:41:30,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-07-14 00:41:30,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-14 00:41:31,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-14 00:41:31,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-14 00:41:32,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-14 00:41:32,207 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:41:32,248 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:41:32,250 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-07-14 00:41:32,250 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-14 00:41:32,255 [ scc.git] DEBUG Check current status 2024-07-14 00:41:32,255 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-14 00:41:32,260 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-07-14 00:41:32,261 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-14 00:41:32,310 [ scc.config] DEBUG Found remote.origin.url 2024-07-14 00:41:32,310 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-07-14 00:41:32,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-07-14 00:41:33,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-14 00:41:33,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-14 00:41:34,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-14 00:41:34,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-14 00:41:34,496 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:41:34,535 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:41:34,536 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-07-14 00:41:34,536 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-14 00:41:34,542 [ scc.git] DEBUG Check current status 2024-07-14 00:41:34,542 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-14 00:41:34,546 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-07-14 00:41:34,546 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-14 00:41:34,593 [ scc.config] DEBUG Found remote.origin.url 2024-07-14 00:41:34,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-07-14 00:41:34,921 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-07-14 00:41:35,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-07-14 00:41:35,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-14 00:41:36,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-14 00:41:36,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-14 00:41:36,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-14 00:41:36,922 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:41:36,971 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:41:36,972 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-07-14 00:41:36,972 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-14 00:41:36,980 [ scc.git] DEBUG Check current status 2024-07-14 00:41:36,981 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-14 00:41:36,987 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-07-14 00:41:36,987 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-14 00:41:37,034 [ scc.config] DEBUG Found remote.origin.url 2024-07-14 00:41:37,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-07-14 00:41:37,352 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-07-14 00:41:37,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-07-14 00:41:38,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-14 00:41:38,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-14 00:41:38,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-14 00:41:39,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-14 00:41:39,350 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:41:39,393 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:41:39,394 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-07-14 00:41:39,394 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-14 00:41:39,399 [ scc.git] DEBUG Check current status 2024-07-14 00:41:39,400 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-14 00:41:39,405 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-07-14 00:41:39,405 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-14 00:41:39,453 [ scc.config] DEBUG Found remote.origin.url 2024-07-14 00:41:39,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-07-14 00:41:40,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-14 00:41:40,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-14 00:41:41,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-14 00:41:41,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-14 00:41:41,559 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:41:41,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:41:41,630 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-07-14 00:41:41,630 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-14 00:41:41,638 [ scc.git] DEBUG Check current status 2024-07-14 00:41:41,639 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-14 00:41:41,648 [ scc.git] DEBUG c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-07-14 00:41:41,649 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-14 00:41:41,720 [ scc.config] DEBUG Found remote.origin.url 2024-07-14 00:41:41,721 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-07-14 00:41:41,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-07-14 00:41:41,989 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-07-14 00:41:42,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-07-14 00:41:42,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-14 00:41:43,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-14 00:41:43,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-14 00:41:44,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-14 00:41:44,010 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:41:44,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:41:44,053 [ scc.git] DEBUG Resetting... 2024-07-14 00:41:44,053 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-07-14 00:41:44,064 [ scc.git] DEBUG HEAD is now at a68f6c1 merge master -Dorg -Snone 2024-07-14 00:41:44,064 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-07-14 00:41:44,171 [ scc.git] DEBUG Check current status 2024-07-14 00:41:44,172 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-14 00:41:44,177 [ scc.git] DEBUG a68f6c1 merge master -Dorg -Snone 2024-07-14 00:41:44,177 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-14 00:41:44,225 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-07-14 00:41:44,227 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-07-14 00:41:44,230 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-07-14 00:41:44,233 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-07-14 00:41:44,240 [ scc.git] DEBUG fefe87cffc62034eb6bf0f596f2eea4937e9bd4e omero-figure (v7.0.0-13-gfefe87cf) 2024-07-14 00:41:44,242 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-07-14 00:41:44,245 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-07-14 00:41:44,248 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-07-14 00:41:44,251 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-07-14 00:41:44,254 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-07-14 00:41:44,257 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-07-14 00:41:44,260 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-07-14 00:41:44,263 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-07-14 00:41:44,266 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-07-14 00:41:44,269 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-07-14 00:41:44,272 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-07-14 00:41:44,274 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-07-14 00:41:44,277 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-07-14 00:41:44,279 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-07-14 00:41:44,282 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-07-14 00:41:44,284 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-07-14 00:41:44,288 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-07-14 00:41:44,289 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-07-14 00:41:44,289 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-07-14 00:41:44,289 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-07-14 00:41:44,289 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-07-14 00:41:44,289 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-07-14 00:41:44,289 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-07-14 00:41:44,289 [ scc.repo] DEBUG ## PRs found: 2024-07-14 00:41:44,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-07-14 00:41:44,464 [ scc.repo] DEBUG ## Branches found: 2024-07-14 00:41:44,465 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:41:44,465 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:41:44,487 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-14 00:41:44,508 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-14 00:41:44,509 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-14 00:41:44,525 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-14 00:41:44,539 [ scc.git] DEBUG Already up to date. 2024-07-14 00:41:44,539 [ scc.git] DEBUG ## Unique users: [] 2024-07-14 00:41:44,539 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:41:44,539 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:41:44,547 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-14 00:41:44,602 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:41:44,602 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:41:44,608 [ scc.repo] DEBUG ## PRs found: 2024-07-14 00:41:44,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-07-14 00:41:44,912 [ scc.repo] DEBUG ## Branches found: 2024-07-14 00:41:44,912 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-07-14 00:41:44,912 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:41:44,912 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:41:44,918 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-14 00:41:44,923 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-14 00:41:44,923 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-14 00:41:44,929 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-14 00:41:44,935 [ scc.git] DEBUG Already up to date. 2024-07-14 00:41:44,936 [ scc.git] DEBUG ## Unique users: [] 2024-07-14 00:41:44,936 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:41:44,936 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:41:44,942 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-14 00:41:44,984 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:41:44,984 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:41:44,990 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:41:45,029 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-14 00:41:45,036 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fee7908ce20> has no local changes 2024-07-14 00:41:45,036 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#122 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/)' 2024-07-14 00:41:45,046 [ scc.git] DEBUG [detached HEAD 09a5bb1] merge master -Dorg -Ssuccess-only 2024-07-14 00:41:45,046 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:41:45,046 [ scc.repo] DEBUG ## PRs found: 2024-07-14 00:41:45,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-07-14 00:41:45,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-07-14 00:41:46,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-07-14 00:41:46,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-07-14 00:41:47,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:41:47,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-14 00:41:48,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-07-14 00:41:48,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:41:48,851 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-07-14 00:41:49,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-07-14 00:41:49,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-07-14 00:41:49,830 [ scc.repo] DEBUG ## Branches found: 2024-07-14 00:41:49,830 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-07-14 00:41:49,830 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:41:49,831 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:41:49,838 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-14 00:41:49,844 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-14 00:41:49,845 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-14 00:41:49,853 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-14 00:41:49,864 [ scc.git] DEBUG Already up to date. 2024-07-14 00:41:49,864 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-07-14 00:41:50,270 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-07-14 00:41:50,271 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-07-14 00:41:50,276 [ scc.git] DEBUG ## Unique users: [] 2024-07-14 00:41:50,276 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:41:50,276 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:41:50,282 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-07-14 00:41:50,287 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:41:50,292 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-07-14 00:41:50,307 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-14 00:41:50,310 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-07-14 00:41:50,310 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-07-14 00:41:50,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:41:50,535 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-14 00:41:50,574 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:41:50,574 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:41:50,581 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:41:50,621 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-14 00:41:50,627 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fee78037ca0> has no local changes 2024-07-14 00:41:50,628 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#122 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/)' 2024-07-14 00:41:50,636 [ scc.git] DEBUG [detached HEAD 4fe1410] merge master -Dorg -Ssuccess-only 2024-07-14 00:41:50,637 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:41:50,637 [ scc.repo] DEBUG ## PRs found: 2024-07-14 00:41:51,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-07-14 00:41:51,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64 HTTP/1.1" 200 None 2024-07-14 00:41:52,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64/comments HTTP/1.1" 200 None 2024-07-14 00:41:52,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-07-14 00:41:53,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:41:53,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-07-14 00:41:53,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/6dffdfe0e7ed620e791de943fad823e440b40639?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:41:53,979 [ scc.repo] DEBUG - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-07-14 00:41:54,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/63 HTTP/1.1" 200 None 2024-07-14 00:41:54,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-07-14 00:41:55,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:41:56,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-07-14 00:41:56,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:41:56,465 [ scc.repo] DEBUG - PR 63 sbesson 'Remove python-future dependency' 2024-07-14 00:41:56,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-07-14 00:41:57,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-07-14 00:41:57,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-07-14 00:41:58,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-07-14 00:41:58,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-07-14 00:41:59,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:41:59,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-07-14 00:42:00,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:42:00,234 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-07-14 00:42:00,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-07-14 00:42:01,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-07-14 00:42:01,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-07-14 00:42:02,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-07-14 00:42:02,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-07-14 00:42:02,590 [ scc.repo] DEBUG ## Branches found: 2024-07-14 00:42:02,590 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-07-14 00:42:02,590 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:42:02,590 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:02,595 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-14 00:42:02,601 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-14 00:42:02,601 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-14 00:42:02,606 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-14 00:42:02,612 [ scc.git] DEBUG Already up to date. 2024-07-14 00:42:02,613 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-07-14 00:42:03,086 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-07-14 00:42:03,087 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-07-14 00:42:03,092 [ scc.git] DEBUG Calling 'git fetch origin pull/63/head' 2024-07-14 00:42:03,538 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-07-14 00:42:03,538 [ scc.git] DEBUG * branch refs/pull/63/head -> FETCH_HEAD 2024-07-14 00:42:03,543 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-07-14 00:42:04,001 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-07-14 00:42:04,002 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-07-14 00:42:04,006 [ scc.git] DEBUG ## Unique users: [] 2024-07-14 00:42:04,006 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:42:04,007 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:04,013 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-07-14 00:42:04,019 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:04,024 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-07-14 00:42:04,045 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-14 00:42:04,049 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-07-14 00:42:04,049 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-07-14 00:42:04,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:42:04,216 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-07-14 00:42:04,223 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:04,229 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 63 (Remove python-future dependency) f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-07-14 00:42:04,268 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-07-14 00:42:04,269 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-14 00:42:04,273 [ scc.git] DEBUG setup.py | 3 +-- 2024-07-14 00:42:04,273 [ scc.git] DEBUG src/omero_cli_render.py | 9 ++------- 2024-07-14 00:42:04,273 [ scc.git] DEBUG test/integration/clitest/test_render.py | 6 +----- 2024-07-14 00:42:04,273 [ scc.git] DEBUG 3 files changed, 4 insertions(+), 14 deletions(-) 2024-07-14 00:42:04,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:42:04,632 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dffdfe0e7ed620e791de943fad823e440b40639' 2024-07-14 00:42:04,639 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:04,645 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Fix thumbnail generation with missing rendering definition) 6dffdfe0e7ed620e791de943fad823e440b40639' 2024-07-14 00:42:04,688 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-07-14 00:42:04,688 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_render.py 2024-07-14 00:42:04,689 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-14 00:42:04,692 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++++++++-- 2024-07-14 00:42:04,693 [ scc.git] DEBUG test/integration/clitest/test_render.py | 12 ++++++++++++ 2024-07-14 00:42:04,693 [ scc.git] DEBUG 2 files changed, 24 insertions(+), 2 deletions(-) 2024-07-14 00:42:05,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:42:05,047 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-14 00:42:05,090 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:42:05,091 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:05,096 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:42:05,138 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-14 00:42:05,145 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fee79117700> has no local changes 2024-07-14 00:42:05,145 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Generated by OMERO-plugins-push#122 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/)' 2024-07-14 00:42:05,154 [ scc.git] DEBUG [detached HEAD 858c3e4] merge master -Dorg -Ssuccess-only 2024-07-14 00:42:05,155 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:42:05,155 [ scc.repo] DEBUG ## PRs found: 2024-07-14 00:42:05,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-07-14 00:42:06,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-07-14 00:42:06,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-07-14 00:42:07,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-07-14 00:42:07,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:42:08,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-14 00:42:08,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-07-14 00:42:09,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-07-14 00:42:09,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-07-14 00:42:09,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-07-14 00:42:09,980 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-07-14 00:42:10,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-07-14 00:42:11,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-07-14 00:42:11,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-07-14 00:42:12,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-07-14 00:42:12,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:42:13,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-07-14 00:42:13,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:42:13,477 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-07-14 00:42:13,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-07-14 00:42:14,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-07-14 00:42:14,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-07-14 00:42:15,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-07-14 00:42:15,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:42:16,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-07-14 00:42:16,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:42:16,847 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-07-14 00:42:16,847 [ scc.repo] DEBUG ## Branches found: 2024-07-14 00:42:16,847 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-07-14 00:42:16,848 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:42:16,848 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:16,854 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-14 00:42:16,859 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-14 00:42:16,859 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-14 00:42:16,864 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-14 00:42:16,869 [ scc.git] DEBUG Already up to date. 2024-07-14 00:42:16,869 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-07-14 00:42:17,280 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-07-14 00:42:17,280 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-07-14 00:42:17,286 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-07-14 00:42:17,665 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-07-14 00:42:17,665 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-07-14 00:42:17,670 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-07-14 00:42:18,047 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-07-14 00:42:18,047 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-07-14 00:42:18,052 [ scc.git] DEBUG ## Unique users: [] 2024-07-14 00:42:18,052 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:42:18,052 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:18,058 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-07-14 00:42:18,066 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:18,073 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-07-14 00:42:18,141 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-07-14 00:42:18,141 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-07-14 00:42:18,141 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-07-14 00:42:18,141 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-14 00:42:18,141 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-14 00:42:18,148 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-07-14 00:42:18,155 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-07-14 00:42:18,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:42:18,317 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-07-14 00:42:18,324 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-07-14 00:42:18,330 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#122](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-07-14 00:42:18,335 [ scc.config] DEBUG Found github.token 2024-07-14 00:42:18,335 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-07-14 00:42:18,335 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-07-14 00:42:18,341 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:18,346 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-07-14 00:42:18,369 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-07-14 00:42:18,369 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-07-14 00:42:18,369 [ scc.git] DEBUG Auto-merging setup.py 2024-07-14 00:42:18,369 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-07-14 00:42:18,369 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-07-14 00:42:18,369 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-07-14 00:42:18,369 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-07-14 00:42:18,369 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-14 00:42:18,369 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-14 00:42:18,375 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-07-14 00:42:18,383 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-07-14 00:42:18,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:42:18,760 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-07-14 00:42:18,767 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-07-14 00:42:18,773 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#122](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-07-14 00:42:18,777 [ scc.config] DEBUG Found github.token 2024-07-14 00:42:18,777 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-07-14 00:42:18,777 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-07-14 00:42:18,783 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:18,788 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-07-14 00:42:18,811 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-07-14 00:42:18,812 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-07-14 00:42:18,812 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-14 00:42:18,819 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-07-14 00:42:18,819 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-07-14 00:42:18,819 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-07-14 00:42:18,819 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-07-14 00:42:18,819 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-07-14 00:42:18,819 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-07-14 00:42:19,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:42:19,167 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-14 00:42:19,210 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:42:19,211 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:19,218 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:42:19,261 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-14 00:42:19,269 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fee73fd24c0> has no local changes 2024-07-14 00:42:19,269 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#122 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/)' 2024-07-14 00:42:19,279 [ scc.git] DEBUG [detached HEAD faf1b72] merge master -Dorg -Ssuccess-only 2024-07-14 00:42:19,279 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:42:19,279 [ scc.repo] DEBUG ## PRs found: 2024-07-14 00:42:19,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-07-14 00:42:20,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-07-14 00:42:20,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-07-14 00:42:21,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/576 HTTP/1.1" 200 None 2024-07-14 00:42:21,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/576/comments HTTP/1.1" 200 None 2024-07-14 00:42:21,582 [ scc.repo] DEBUG # ... Include label: include 2024-07-14 00:42:22,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/88901984c22249d20925e53c455cd822700be6d4 HTTP/1.1" 200 None 2024-07-14 00:42:22,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/88901984c22249d20925e53c455cd822700be6d4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:42:23,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/88901984c22249d20925e53c455cd822700be6d4/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-14 00:42:23,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/88901984c22249d20925e53c455cd822700be6d4 HTTP/1.1" 200 None 2024-07-14 00:42:23,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/88901984c22249d20925e53c455cd822700be6d4?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:42:23,978 [ scc.repo] DEBUG - PR 576 Rdornier 'Color picker - popup update' 2024-07-14 00:42:24,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None 2024-07-14 00:42:24,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None 2024-07-14 00:42:25,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-07-14 00:42:25,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:42:26,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-14 00:42:26,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-07-14 00:42:27,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:42:27,404 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-07-14 00:42:27,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560 HTTP/1.1" 200 None 2024-07-14 00:42:28,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560/comments HTTP/1.1" 200 None 2024-07-14 00:42:28,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c HTTP/1.1" 200 None 2024-07-14 00:42:29,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:42:29,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-14 00:42:30,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c HTTP/1.1" 200 None 2024-07-14 00:42:30,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:42:30,743 [ scc.repo] DEBUG - PR 560 will-moore 'Max projection bytes' 2024-07-14 00:42:31,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-07-14 00:42:31,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-07-14 00:42:32,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-07-14 00:42:32,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:42:33,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-14 00:42:33,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-07-14 00:42:34,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:42:34,225 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-07-14 00:42:34,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-07-14 00:42:35,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549/comments HTTP/1.1" 200 None 2024-07-14 00:42:35,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77 HTTP/1.1" 200 None 2024-07-14 00:42:36,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:42:36,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-14 00:42:37,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77 HTTP/1.1" 200 None 2024-07-14 00:42:37,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/f7d26b972bfe9a7105c4f94776748446f2395c77?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:42:37,594 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature' 2024-07-14 00:42:37,594 [ scc.repo] DEBUG ## Branches found: 2024-07-14 00:42:37,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-07-14 00:42:37,595 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:42:37,595 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:37,602 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-14 00:42:37,609 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-14 00:42:37,609 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-14 00:42:37,617 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-14 00:42:37,625 [ scc.git] DEBUG Already up to date. 2024-07-14 00:42:37,626 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head' 2024-07-14 00:42:38,048 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-07-14 00:42:38,049 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD 2024-07-14 00:42:38,056 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-07-14 00:42:38,806 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-07-14 00:42:38,806 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-07-14 00:42:38,813 [ scc.git] DEBUG Calling 'git fetch origin pull/560/head' 2024-07-14 00:42:39,844 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-07-14 00:42:39,844 [ scc.git] DEBUG * branch refs/pull/560/head -> FETCH_HEAD 2024-07-14 00:42:39,850 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head' 2024-07-14 00:42:40,203 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-07-14 00:42:40,203 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD 2024-07-14 00:42:40,208 [ scc.git] DEBUG Calling 'git fetch origin pull/576/head' 2024-07-14 00:42:40,754 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-07-14 00:42:40,754 [ scc.git] DEBUG * branch refs/pull/576/head -> FETCH_HEAD 2024-07-14 00:42:40,759 [ scc.git] DEBUG ## Unique users: [] 2024-07-14 00:42:40,759 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:42:40,759 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:40,765 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f7d26b972bfe9a7105c4f94776748446f2395c77' 2024-07-14 00:42:40,774 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:40,780 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) f7d26b972bfe9a7105c4f94776748446f2395c77' 2024-07-14 00:42:40,858 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-07-14 00:42:40,858 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-14 00:42:40,865 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++- 2024-07-14 00:42:40,865 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++++ 2024-07-14 00:42:40,865 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++ 2024-07-14 00:42:40,865 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 +++++++++++++- 2024-07-14 00:42:40,865 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 + 2024-07-14 00:42:40,865 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++- 2024-07-14 00:42:40,865 [ scc.git] DEBUG src/js/views/right_panel_view.js | 74 +++++++++++++++++++++++++++++- 2024-07-14 00:42:40,865 [ scc.git] DEBUG src/js/views/util.js | 54 ++++++++++++++++++++++ 2024-07-14 00:42:40,865 [ scc.git] DEBUG src/templates/rois_form.template.html | 8 ++++ 2024-07-14 00:42:40,865 [ scc.git] DEBUG 9 files changed, 271 insertions(+), 5 deletions(-) 2024-07-14 00:42:41,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:42:41,028 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-07-14 00:42:41,038 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:41,044 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-07-14 00:42:41,268 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-07-14 00:42:41,268 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-07-14 00:42:41,268 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-07-14 00:42:41,268 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-07-14 00:42:41,269 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-14 00:42:41,276 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-07-14 00:42:41,276 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-07-14 00:42:41,276 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-07-14 00:42:41,276 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-07-14 00:42:41,276 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-07-14 00:42:41,276 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++- 2024-07-14 00:42:41,276 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +- 2024-07-14 00:42:41,276 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-07-14 00:42:41,277 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-07-14 00:42:41,277 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-07-14 00:42:41,277 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-) 2024-07-14 00:42:41,277 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-07-14 00:42:41,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:42:41,435 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c' 2024-07-14 00:42:41,445 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:41,452 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 560 (Max projection bytes) 3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c' 2024-07-14 00:42:41,709 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-07-14 00:42:41,709 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-07-14 00:42:41,709 [ scc.git] DEBUG Auto-merging src/index.html 2024-07-14 00:42:41,709 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2024-07-14 00:42:41,709 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-07-14 00:42:41,709 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-07-14 00:42:41,710 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-14 00:42:41,718 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 24 +++++++-- 2024-07-14 00:42:41,718 [ scc.git] DEBUG omero_figure/urls.py | 10 +++- 2024-07-14 00:42:41,718 [ scc.git] DEBUG omero_figure/views.py | 58 ++++++++++++++++++++++ 2024-07-14 00:42:41,718 [ scc.git] DEBUG src/css/figure.css | 5 -- 2024-07-14 00:42:41,718 [ scc.git] DEBUG src/index.html | 1 + 2024-07-14 00:42:41,718 [ scc.git] DEBUG src/js/models/figure_model.js | 29 ++++++++++- 2024-07-14 00:42:41,718 [ scc.git] DEBUG src/js/models/panel_model.js | 29 ++++++++++- 2024-07-14 00:42:41,718 [ scc.git] DEBUG src/js/views/info_panel_view.js | 3 +- 2024-07-14 00:42:41,718 [ scc.git] DEBUG src/js/views/modal_views.js | 2 + 2024-07-14 00:42:41,718 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +- 2024-07-14 00:42:41,718 [ scc.git] DEBUG src/js/views/right_panel_view.js | 5 ++ 2024-07-14 00:42:41,718 [ scc.git] DEBUG src/js/views/scalebar_form_view.js | 3 +- 2024-07-14 00:42:41,718 [ scc.git] DEBUG src/templates/image_display_options.template.html | 4 +- 2024-07-14 00:42:41,718 [ scc.git] DEBUG src/templates/info_panel.template.html | 2 + 2024-07-14 00:42:41,718 [ scc.git] DEBUG 14 files changed, 162 insertions(+), 15 deletions(-) 2024-07-14 00:42:41,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:42:41,882 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-07-14 00:42:41,891 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:41,897 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-07-14 00:42:41,950 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-14 00:42:41,953 [ scc.git] DEBUG setup.py | 2 +- 2024-07-14 00:42:41,953 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-07-14 00:42:42,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:42:42,312 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...88901984c22249d20925e53c455cd822700be6d4' 2024-07-14 00:42:42,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:42,328 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 576 (Color picker - popup update) 88901984c22249d20925e53c455cd822700be6d4' 2024-07-14 00:42:42,410 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-07-14 00:42:42,410 [ scc.git] DEBUG Auto-merging src/index.html 2024-07-14 00:42:42,411 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-14 00:42:42,415 [ scc.git] DEBUG .gitignore | 2 +- 2024-07-14 00:42:42,415 [ scc.git] DEBUG src/css/figure.css | 3 +++ 2024-07-14 00:42:42,415 [ scc.git] DEBUG src/index.html | 3 +++ 2024-07-14 00:42:42,415 [ scc.git] DEBUG src/js/views/colorpicker.js | 10 ++++++++-- 2024-07-14 00:42:42,415 [ scc.git] DEBUG 4 files changed, 15 insertions(+), 3 deletions(-) 2024-07-14 00:42:42,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:42:42,722 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-14 00:42:42,764 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:42:42,764 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:42,769 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:42:42,809 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-14 00:42:42,818 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fee70f7a430> has no local changes 2024-07-14 00:42:42,818 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 577 Rdornier 'Fill rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 560 will-moore 'Max projection bytes' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 576 Rdornier 'Color picker - popup update' Generated by OMERO-plugins-push#122 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/)' 2024-07-14 00:42:42,830 [ scc.git] DEBUG [detached HEAD f9a21323] merge master -Dorg -Ssuccess-only 2024-07-14 00:42:42,831 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:42:42,831 [ scc.repo] DEBUG ## PRs found: 2024-07-14 00:42:43,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-07-14 00:42:43,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-07-14 00:42:44,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-07-14 00:42:44,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-07-14 00:42:45,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:42:45,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-07-14 00:42:46,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:42:46,015 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-07-14 00:42:46,015 [ scc.repo] DEBUG ## Branches found: 2024-07-14 00:42:46,015 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-07-14 00:42:46,015 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:42:46,015 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:46,021 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-14 00:42:46,026 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-14 00:42:46,026 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-14 00:42:46,032 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-14 00:42:46,037 [ scc.git] DEBUG Already up to date. 2024-07-14 00:42:46,037 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-07-14 00:42:46,451 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-07-14 00:42:46,451 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-07-14 00:42:46,456 [ scc.git] DEBUG ## Unique users: [] 2024-07-14 00:42:46,456 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:42:46,456 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:46,462 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-07-14 00:42:46,468 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:46,474 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-07-14 00:42:46,517 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-07-14 00:42:46,518 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-14 00:42:46,521 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-07-14 00:42:46,521 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-07-14 00:42:46,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:42:46,687 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-14 00:42:46,726 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:42:46,726 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:46,732 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:42:46,771 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-14 00:42:46,778 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fee7804ef40> has no local changes 2024-07-14 00:42:46,778 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#122 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/)' 2024-07-14 00:42:46,787 [ scc.git] DEBUG [detached HEAD 791a59a] merge master -Dorg -Ssuccess-only 2024-07-14 00:42:46,787 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:42:46,788 [ scc.repo] DEBUG ## PRs found: 2024-07-14 00:42:47,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-07-14 00:42:47,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-07-14 00:42:47,732 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-14 00:42:48,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-07-14 00:42:48,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:42:49,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-14 00:42:49,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-07-14 00:42:50,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:42:50,249 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-07-14 00:42:50,250 [ scc.repo] DEBUG ## Branches found: 2024-07-14 00:42:50,250 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-07-14 00:42:50,250 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:42:50,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:50,256 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-14 00:42:50,261 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-14 00:42:50,261 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-14 00:42:50,266 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-14 00:42:50,271 [ scc.git] DEBUG Already up to date. 2024-07-14 00:42:50,271 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-07-14 00:42:50,641 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-07-14 00:42:50,642 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-07-14 00:42:50,647 [ scc.git] DEBUG ## Unique users: [] 2024-07-14 00:42:50,647 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:42:50,647 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:50,654 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-07-14 00:42:50,660 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:50,667 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-07-14 00:42:50,679 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-14 00:42:50,683 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-07-14 00:42:50,683 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-07-14 00:42:50,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:42:50,861 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-14 00:42:50,904 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:42:50,904 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:42:50,909 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:42:50,956 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-14 00:42:50,964 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fee70f88fa0> has no local changes 2024-07-14 00:42:50,965 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#122 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/)' 2024-07-14 00:42:50,975 [ scc.git] DEBUG [detached HEAD 8640f67] merge master -Dorg -Ssuccess-only 2024-07-14 00:42:50,975 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:42:50,975 [ scc.repo] DEBUG ## PRs found: 2024-07-14 00:42:51,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-07-14 00:42:51,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-07-14 00:42:51,962 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-14 00:42:52,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-07-14 00:42:53,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:42:53,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-14 00:42:54,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-07-14 00:42:54,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:42:54,576 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-07-14 00:42:55,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-07-14 00:42:55,059 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-14 00:42:55,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-07-14 00:42:56,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:42:56,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-14 00:42:57,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-07-14 00:42:57,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:42:57,616 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-07-14 00:42:58,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-07-14 00:42:58,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-07-14 00:42:59,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-07-14 00:42:59,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:42:59,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-14 00:43:00,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-07-14 00:43:00,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:43:00,869 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-07-14 00:43:01,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-07-14 00:43:01,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-07-14 00:43:02,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-07-14 00:43:02,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:43:03,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-14 00:43:03,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-07-14 00:43:04,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:43:04,276 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-07-14 00:43:04,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-07-14 00:43:05,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-07-14 00:43:05,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-07-14 00:43:06,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:43:06,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-07-14 00:43:07,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:43:07,016 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-07-14 00:43:07,017 [ scc.repo] DEBUG ## Branches found: 2024-07-14 00:43:07,017 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-07-14 00:43:07,017 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:07,017 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:07,024 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-14 00:43:07,030 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-14 00:43:07,030 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-14 00:43:07,091 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-14 00:43:07,097 [ scc.git] DEBUG Already up to date. 2024-07-14 00:43:07,097 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-07-14 00:43:07,604 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-07-14 00:43:07,605 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-07-14 00:43:07,611 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-07-14 00:43:08,710 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-07-14 00:43:08,711 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-07-14 00:43:08,716 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-07-14 00:43:09,137 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-07-14 00:43:09,137 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-07-14 00:43:09,143 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-07-14 00:43:09,496 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-07-14 00:43:09,496 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-07-14 00:43:09,502 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-07-14 00:43:09,877 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-07-14 00:43:09,877 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-07-14 00:43:09,882 [ scc.git] DEBUG ## Unique users: [] 2024-07-14 00:43:09,883 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:09,883 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:09,889 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-07-14 00:43:09,896 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:09,903 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-07-14 00:43:10,040 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-07-14 00:43:10,041 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-14 00:43:10,045 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-07-14 00:43:10,045 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-07-14 00:43:10,045 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-07-14 00:43:10,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:43:10,202 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-07-14 00:43:10,209 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:10,215 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-07-14 00:43:10,393 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-07-14 00:43:10,394 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-07-14 00:43:10,394 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-07-14 00:43:10,394 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-07-14 00:43:10,394 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-14 00:43:10,399 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-07-14 00:43:10,399 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-07-14 00:43:10,399 [ scc.git] DEBUG src/app/header.html | 5 + 2024-07-14 00:43:10,399 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-07-14 00:43:10,399 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-07-14 00:43:10,399 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-07-14 00:43:10,399 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-07-14 00:43:10,399 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-07-14 00:43:10,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:43:10,600 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-07-14 00:43:10,609 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:10,615 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-07-14 00:43:10,679 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-07-14 00:43:10,680 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-14 00:43:10,683 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-07-14 00:43:10,684 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-07-14 00:43:10,684 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-07-14 00:43:11,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:43:11,024 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-07-14 00:43:11,052 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:11,059 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-07-14 00:43:11,102 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-14 00:43:11,111 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-07-14 00:43:11,112 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-07-14 00:43:11,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:43:11,436 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-07-14 00:43:11,456 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:11,462 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-07-14 00:43:11,525 [ scc.git] DEBUG Auto-merging package-lock.json 2024-07-14 00:43:11,527 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-14 00:43:11,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:43:11,865 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-14 00:43:11,909 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:11,910 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:11,916 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:43:11,958 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-14 00:43:11,969 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fee78029df0> has no local changes 2024-07-14 00:43:11,969 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' Generated by OMERO-plugins-push#122 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/)' 2024-07-14 00:43:11,982 [ scc.git] DEBUG [detached HEAD 737d314] merge master -Dorg -Ssuccess-only 2024-07-14 00:43:11,982 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:43:11,983 [ scc.repo] DEBUG ## PRs found: 2024-07-14 00:43:12,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-07-14 00:43:12,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-07-14 00:43:13,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-07-14 00:43:13,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-07-14 00:43:14,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:43:14,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-14 00:43:15,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-07-14 00:43:15,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:43:15,885 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-07-14 00:43:15,886 [ scc.repo] DEBUG ## Branches found: 2024-07-14 00:43:15,886 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-07-14 00:43:15,886 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:15,886 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:15,892 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-14 00:43:15,897 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-14 00:43:15,897 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-14 00:43:15,903 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-14 00:43:15,908 [ scc.git] DEBUG Already up to date. 2024-07-14 00:43:15,908 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-07-14 00:43:16,269 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-07-14 00:43:16,270 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-07-14 00:43:16,274 [ scc.git] DEBUG ## Unique users: [] 2024-07-14 00:43:16,274 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:16,275 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:16,280 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-07-14 00:43:16,286 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:16,291 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-07-14 00:43:16,300 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-14 00:43:16,303 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-07-14 00:43:16,303 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-07-14 00:43:16,303 [ scc.git] DEBUG requirements.txt | 2 +- 2024-07-14 00:43:16,303 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-07-14 00:43:16,303 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-07-14 00:43:16,303 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-07-14 00:43:16,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:43:16,465 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-14 00:43:16,522 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:16,522 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:16,528 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:43:16,567 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-14 00:43:16,574 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fee7073f610> has no local changes 2024-07-14 00:43:16,575 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#122 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/)' 2024-07-14 00:43:16,585 [ scc.git] DEBUG [detached HEAD b22b908] merge master -Dorg -Ssuccess-only 2024-07-14 00:43:16,585 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:43:16,586 [ scc.repo] DEBUG ## PRs found: 2024-07-14 00:43:17,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-07-14 00:43:17,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-07-14 00:43:18,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-07-14 00:43:18,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-07-14 00:43:18,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:43:19,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-07-14 00:43:19,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:43:19,850 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-07-14 00:43:20,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-07-14 00:43:20,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-07-14 00:43:21,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-07-14 00:43:21,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:43:22,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-07-14 00:43:22,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:43:22,703 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-07-14 00:43:22,703 [ scc.repo] DEBUG ## Branches found: 2024-07-14 00:43:22,703 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-07-14 00:43:22,703 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:22,703 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:22,709 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-14 00:43:22,716 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-14 00:43:22,716 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-14 00:43:22,722 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-14 00:43:22,727 [ scc.git] DEBUG Already up to date. 2024-07-14 00:43:22,727 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-07-14 00:43:23,381 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-07-14 00:43:23,382 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-07-14 00:43:23,387 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-07-14 00:43:23,916 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-07-14 00:43:23,917 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-07-14 00:43:23,923 [ scc.git] DEBUG ## Unique users: [] 2024-07-14 00:43:23,923 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:23,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:23,930 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-07-14 00:43:23,937 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:23,943 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-07-14 00:43:24,004 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-07-14 00:43:24,004 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-07-14 00:43:24,004 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-07-14 00:43:24,004 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-07-14 00:43:24,004 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-14 00:43:24,005 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-14 00:43:24,011 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-07-14 00:43:24,019 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-07-14 00:43:24,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:43:24,191 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-07-14 00:43:24,198 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-07-14 00:43:24,205 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#122](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-07-14 00:43:24,213 [ scc.config] DEBUG Found github.token 2024-07-14 00:43:24,214 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-07-14 00:43:24,214 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-07-14 00:43:24,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:24,228 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-07-14 00:43:24,262 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-07-14 00:43:24,262 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-07-14 00:43:24,262 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-07-14 00:43:24,262 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-14 00:43:24,263 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-14 00:43:24,270 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-07-14 00:43:24,278 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-07-14 00:43:24,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:43:24,607 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-07-14 00:43:24,615 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-07-14 00:43:24,621 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#122](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-07-14 00:43:24,627 [ scc.config] DEBUG Found github.token 2024-07-14 00:43:24,627 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-07-14 00:43:24,627 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-14 00:43:24,667 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:24,668 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:24,673 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:43:24,712 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-14 00:43:24,720 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fee7073f8b0> has no local changes 2024-07-14 00:43:24,721 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#122 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/)' 2024-07-14 00:43:24,730 [ scc.git] DEBUG [detached HEAD da39330] merge master -Dorg -Ssuccess-only 2024-07-14 00:43:24,730 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:43:24,731 [ scc.repo] DEBUG ## PRs found: 2024-07-14 00:43:25,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-07-14 00:43:25,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-07-14 00:43:25,670 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-14 00:43:26,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-07-14 00:43:26,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:43:27,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-14 00:43:27,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-07-14 00:43:28,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:43:28,153 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-07-14 00:43:28,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-07-14 00:43:28,607 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-14 00:43:29,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-07-14 00:43:29,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:43:30,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-14 00:43:30,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-07-14 00:43:31,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:43:31,158 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-07-14 00:43:31,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-07-14 00:43:31,656 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-14 00:43:32,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-07-14 00:43:32,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:43:33,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-14 00:43:33,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-07-14 00:43:34,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:43:34,166 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-07-14 00:43:34,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-07-14 00:43:35,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-07-14 00:43:35,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-07-14 00:43:36,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-07-14 00:43:36,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-07-14 00:43:37,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-07-14 00:43:37,037 [ scc.repo] DEBUG ## Branches found: 2024-07-14 00:43:37,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-07-14 00:43:37,037 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:37,037 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:37,045 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-14 00:43:37,052 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-14 00:43:37,052 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-14 00:43:37,062 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-14 00:43:37,069 [ scc.git] DEBUG Already up to date. 2024-07-14 00:43:37,070 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-07-14 00:43:37,426 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-07-14 00:43:37,426 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-07-14 00:43:37,434 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-07-14 00:43:37,779 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-07-14 00:43:37,780 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-07-14 00:43:37,786 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-07-14 00:43:38,146 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-07-14 00:43:38,146 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-07-14 00:43:38,153 [ scc.git] DEBUG ## Unique users: [] 2024-07-14 00:43:38,153 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:38,153 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:38,161 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-07-14 00:43:38,168 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:38,174 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-07-14 00:43:38,186 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-14 00:43:38,189 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-07-14 00:43:38,189 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-07-14 00:43:38,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:43:38,356 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-07-14 00:43:38,362 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:38,367 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-07-14 00:43:38,421 [ scc.git] DEBUG Auto-merging package-lock.json 2024-07-14 00:43:38,422 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-14 00:43:38,426 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-07-14 00:43:38,426 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-07-14 00:43:38,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:43:38,765 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-07-14 00:43:38,772 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:38,779 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-07-14 00:43:38,792 [ scc.git] DEBUG Auto-merging package-lock.json 2024-07-14 00:43:38,794 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-14 00:43:38,798 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-07-14 00:43:38,798 [ scc.git] DEBUG package.json | 2 +- 2024-07-14 00:43:38,798 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-07-14 00:43:39,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:43:39,205 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-14 00:43:39,249 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:39,249 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:39,257 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:43:39,303 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-14 00:43:39,311 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fee7073f670> has no local changes 2024-07-14 00:43:39,312 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#122 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/)' 2024-07-14 00:43:39,322 [ scc.git] DEBUG [detached HEAD 0184777] merge master -Dorg -Ssuccess-only 2024-07-14 00:43:39,323 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:43:39,323 [ scc.repo] DEBUG ## PRs found: 2024-07-14 00:43:39,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-07-14 00:43:40,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-07-14 00:43:40,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-07-14 00:43:41,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:43:41,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-07-14 00:43:41,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:43:41,996 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-07-14 00:43:41,996 [ scc.repo] DEBUG ## Branches found: 2024-07-14 00:43:41,996 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-07-14 00:43:41,996 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:41,997 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:42,003 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-14 00:43:42,008 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-14 00:43:42,009 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-14 00:43:42,014 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-14 00:43:42,019 [ scc.git] DEBUG Already up to date. 2024-07-14 00:43:42,020 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-07-14 00:43:42,427 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-07-14 00:43:42,428 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-07-14 00:43:42,432 [ scc.git] DEBUG ## Unique users: [] 2024-07-14 00:43:42,433 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:42,433 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:42,438 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-07-14 00:43:42,443 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:42,448 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-07-14 00:43:42,456 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-14 00:43:42,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:43:42,629 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-14 00:43:42,677 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:42,677 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:42,684 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:43:42,729 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-14 00:43:42,739 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fee73fddee0> has no local changes 2024-07-14 00:43:42,740 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#122 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/)' 2024-07-14 00:43:42,751 [ scc.git] DEBUG [detached HEAD 38bed8b] merge master -Dorg -Ssuccess-only 2024-07-14 00:43:42,752 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:43:42,752 [ scc.repo] DEBUG ## PRs found: 2024-07-14 00:43:43,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-07-14 00:43:43,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-07-14 00:43:44,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-07-14 00:43:44,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-07-14 00:43:45,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-07-14 00:43:45,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:43:46,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-07-14 00:43:46,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:43:46,617 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-07-14 00:43:46,617 [ scc.repo] DEBUG ## Branches found: 2024-07-14 00:43:46,617 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-07-14 00:43:46,617 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:46,617 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:46,624 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-14 00:43:46,629 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-14 00:43:46,629 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-14 00:43:46,634 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-14 00:43:46,639 [ scc.git] DEBUG Already up to date. 2024-07-14 00:43:46,640 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-07-14 00:43:47,114 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-07-14 00:43:47,114 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-07-14 00:43:47,119 [ scc.git] DEBUG ## Unique users: [] 2024-07-14 00:43:47,119 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:47,119 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:47,125 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-07-14 00:43:47,130 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:47,135 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-07-14 00:43:47,144 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-07-14 00:43:47,145 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-14 00:43:47,148 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-07-14 00:43:47,148 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-07-14 00:43:47,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:43:47,351 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-14 00:43:47,392 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:47,393 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:47,399 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:43:47,439 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-14 00:43:47,449 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fee70750b80> has no local changes 2024-07-14 00:43:47,449 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#122 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/)' 2024-07-14 00:43:47,459 [ scc.git] DEBUG [detached HEAD 1edfccc] merge master -Dorg -Ssuccess-only 2024-07-14 00:43:47,459 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:43:47,460 [ scc.repo] DEBUG ## PRs found: 2024-07-14 00:43:47,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-07-14 00:43:48,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-07-14 00:43:48,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-07-14 00:43:49,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-07-14 00:43:49,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:43:50,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-07-14 00:43:50,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:43:50,772 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-07-14 00:43:50,772 [ scc.repo] DEBUG ## Branches found: 2024-07-14 00:43:50,772 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-07-14 00:43:50,773 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:50,773 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:50,780 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-14 00:43:50,785 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-14 00:43:50,785 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-14 00:43:50,790 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-14 00:43:50,795 [ scc.git] DEBUG Already up to date. 2024-07-14 00:43:50,796 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-07-14 00:43:51,296 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-07-14 00:43:51,296 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-07-14 00:43:51,301 [ scc.git] DEBUG ## Unique users: [] 2024-07-14 00:43:51,301 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:51,301 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:51,307 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-07-14 00:43:51,313 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:51,320 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-07-14 00:43:51,344 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-07-14 00:43:51,344 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-07-14 00:43:51,344 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-07-14 00:43:51,344 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-07-14 00:43:51,344 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-07-14 00:43:51,344 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-07-14 00:43:51,344 [ scc.git] DEBUG Auto-merging setup.py 2024-07-14 00:43:51,344 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-07-14 00:43:51,345 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-14 00:43:51,345 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-14 00:43:51,352 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-07-14 00:43:51,360 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-07-14 00:43:51,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:43:51,522 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-07-14 00:43:51,529 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-07-14 00:43:51,536 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#122](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - omero_signup/signup_settings.py - setup.py - omero_signup/urls.py --conflicts 2024-07-14 00:43:51,541 [ scc.config] DEBUG Found github.token 2024-07-14 00:43:51,542 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-07-14 00:43:51,542 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-14 00:43:51,582 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:51,582 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:51,587 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:43:51,627 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-14 00:43:51,634 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fee70f9ef10> has no local changes 2024-07-14 00:43:51,635 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#122 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/)' 2024-07-14 00:43:51,645 [ scc.git] DEBUG [detached HEAD 3c37714] merge master -Dorg -Ssuccess-only 2024-07-14 00:43:51,645 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:43:51,645 [ scc.repo] DEBUG ## PRs found: 2024-07-14 00:43:52,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-07-14 00:43:52,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-07-14 00:43:52,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-07-14 00:43:53,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-07-14 00:43:53,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:43:54,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-07-14 00:43:54,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:43:54,914 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-07-14 00:43:54,914 [ scc.repo] DEBUG ## Branches found: 2024-07-14 00:43:54,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-07-14 00:43:54,914 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:54,914 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:54,920 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-14 00:43:54,926 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-14 00:43:54,927 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-14 00:43:54,933 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-14 00:43:54,940 [ scc.git] DEBUG Already up to date. 2024-07-14 00:43:54,941 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-07-14 00:43:55,373 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-07-14 00:43:55,373 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-07-14 00:43:55,380 [ scc.git] DEBUG ## Unique users: [] 2024-07-14 00:43:55,380 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:55,380 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:55,386 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-07-14 00:43:55,394 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:55,400 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-07-14 00:43:55,427 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-14 00:43:55,431 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-07-14 00:43:55,431 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-07-14 00:43:55,431 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-07-14 00:43:55,431 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-07-14 00:43:55,431 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-07-14 00:43:55,431 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-07-14 00:43:55,431 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-07-14 00:43:55,431 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-07-14 00:43:55,433 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-07-14 00:43:55,433 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-07-14 00:43:55,433 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-07-14 00:43:55,433 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-07-14 00:43:55,433 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-07-14 00:43:55,433 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-07-14 00:43:55,433 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-07-14 00:43:55,433 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-07-14 00:43:55,433 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-07-14 00:43:55,433 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-07-14 00:43:55,433 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-07-14 00:43:55,433 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-07-14 00:43:55,433 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-07-14 00:43:55,433 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-07-14 00:43:55,433 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-07-14 00:43:55,433 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-07-14 00:43:55,433 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-07-14 00:43:55,434 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-07-14 00:43:55,434 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-07-14 00:43:55,434 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-07-14 00:43:55,434 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-07-14 00:43:55,434 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-07-14 00:43:55,434 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-07-14 00:43:55,434 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-07-14 00:43:55,434 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-07-14 00:43:55,434 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-07-14 00:43:55,434 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-07-14 00:43:55,434 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-07-14 00:43:55,434 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-07-14 00:43:55,434 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-07-14 00:43:55,434 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-07-14 00:43:55,434 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-07-14 00:43:55,434 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-07-14 00:43:55,434 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-07-14 00:43:55,434 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-07-14 00:43:55,434 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-07-14 00:43:55,434 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-07-14 00:43:55,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:43:55,590 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-14 00:43:55,633 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:55,633 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:55,639 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:43:55,681 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-14 00:43:55,690 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fee7076a700> has no local changes 2024-07-14 00:43:55,690 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#122 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/)' 2024-07-14 00:43:55,701 [ scc.git] DEBUG [detached HEAD aba7f3a] merge master -Dorg -Ssuccess-only 2024-07-14 00:43:55,702 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:43:55,702 [ scc.repo] DEBUG ## PRs found: 2024-07-14 00:43:56,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-07-14 00:43:56,024 [ scc.repo] DEBUG ## Branches found: 2024-07-14 00:43:56,024 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-07-14 00:43:56,024 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:56,024 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:56,030 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-14 00:43:56,034 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-14 00:43:56,035 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-14 00:43:56,039 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-14 00:43:56,046 [ scc.git] DEBUG Already up to date. 2024-07-14 00:43:56,046 [ scc.git] DEBUG ## Unique users: [] 2024-07-14 00:43:56,046 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:56,046 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:56,052 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-14 00:43:56,096 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:56,097 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:56,102 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:43:56,147 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-14 00:43:56,154 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fee70770e50> has no local changes 2024-07-14 00:43:56,155 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#122 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/)' 2024-07-14 00:43:56,164 [ scc.git] DEBUG [detached HEAD 8097792] merge master -Dorg -Ssuccess-only 2024-07-14 00:43:56,165 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:43:56,165 [ scc.repo] DEBUG ## PRs found: 2024-07-14 00:43:56,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-07-14 00:43:56,444 [ scc.repo] DEBUG ## Branches found: 2024-07-14 00:43:56,444 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-07-14 00:43:56,444 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:56,444 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:56,451 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-14 00:43:56,456 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-14 00:43:56,456 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-14 00:43:56,462 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-14 00:43:56,468 [ scc.git] DEBUG Already up to date. 2024-07-14 00:43:56,468 [ scc.git] DEBUG ## Unique users: [] 2024-07-14 00:43:56,468 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:56,468 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:56,474 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-14 00:43:56,514 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:43:56,514 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:43:56,520 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:43:56,558 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-14 00:43:56,565 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fee707184f0> has no local changes 2024-07-14 00:43:56,565 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#122 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/)' 2024-07-14 00:43:56,573 [ scc.git] DEBUG [detached HEAD e4d7a9f] merge master -Dorg -Ssuccess-only 2024-07-14 00:43:56,573 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:43:56,573 [ scc.git] INFO Overriding base-branch from master to main 2024-07-14 00:43:56,573 [ scc.repo] DEBUG ## PRs found: 2024-07-14 00:43:56,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-07-14 00:43:57,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-07-14 00:43:57,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-07-14 00:43:58,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-07-14 00:43:58,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-07-14 00:43:59,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:43:59,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-14 00:44:00,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-07-14 00:44:00,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:44:00,824 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-07-14 00:44:00,824 [ scc.repo] DEBUG ## Branches found: 2024-07-14 00:44:00,824 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-07-14 00:44:00,824 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:44:00,824 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:44:00,830 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-07-14 00:44:00,835 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-14 00:44:00,835 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-07-14 00:44:00,841 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-07-14 00:44:00,848 [ scc.git] DEBUG Already up to date. 2024-07-14 00:44:00,848 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-07-14 00:44:01,573 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-07-14 00:44:01,573 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-07-14 00:44:01,577 [ scc.git] DEBUG ## Unique users: [] 2024-07-14 00:44:01,578 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:44:01,578 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:44:01,583 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-07-14 00:44:01,588 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:44:01,593 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-07-14 00:44:01,609 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-07-14 00:44:01,609 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-07-14 00:44:01,609 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-14 00:44:01,609 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-14 00:44:01,615 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-07-14 00:44:01,621 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-07-14 00:44:01,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:44:01,786 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-07-14 00:44:01,792 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-07-14 00:44:01,797 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#122](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-07-14 00:44:01,802 [ scc.config] DEBUG Found github.token 2024-07-14 00:44:01,802 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-07-14 00:44:01,802 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-14 00:44:01,842 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:44:01,842 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:44:01,848 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:44:01,886 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-14 00:44:01,893 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fee706c94f0> has no local changes 2024-07-14 00:44:01,893 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#122 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/)' 2024-07-14 00:44:01,902 [ scc.git] DEBUG [detached HEAD 17e0645] merge master -Dorg -Ssuccess-only 2024-07-14 00:44:01,902 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:44:01,902 [ scc.repo] DEBUG ## PRs found: 2024-07-14 00:44:02,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-07-14 00:44:02,225 [ scc.repo] DEBUG ## Branches found: 2024-07-14 00:44:02,225 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-07-14 00:44:02,225 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:44:02,226 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:44:02,231 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-14 00:44:02,237 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-14 00:44:02,237 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-14 00:44:02,242 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-14 00:44:02,248 [ scc.git] DEBUG Already up to date. 2024-07-14 00:44:02,248 [ scc.git] DEBUG ## Unique users: [] 2024-07-14 00:44:02,248 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:44:02,248 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:44:02,254 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-14 00:44:02,293 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:44:02,293 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:44:02,299 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:44:02,339 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-14 00:44:02,346 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fee70733f40> has no local changes 2024-07-14 00:44:02,346 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#122 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/)' 2024-07-14 00:44:02,357 [ scc.git] DEBUG [detached HEAD 86aa5ed] merge master -Dorg -Ssuccess-only 2024-07-14 00:44:02,357 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:44:02,357 [ scc.repo] DEBUG ## PRs found: 2024-07-14 00:44:02,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-07-14 00:44:02,674 [ scc.repo] DEBUG ## Branches found: 2024-07-14 00:44:02,674 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-07-14 00:44:02,674 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:44:02,674 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:44:02,679 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-14 00:44:02,684 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-14 00:44:02,684 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-14 00:44:02,690 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-14 00:44:02,696 [ scc.git] DEBUG Already up to date. 2024-07-14 00:44:02,696 [ scc.git] DEBUG ## Unique users: [] 2024-07-14 00:44:02,696 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:44:02,696 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:44:02,701 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-14 00:44:02,743 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:44:02,743 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:44:02,749 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:44:02,787 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-14 00:44:02,794 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fee706f1700> has no local changes 2024-07-14 00:44:02,794 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#122 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/)' 2024-07-14 00:44:02,804 [ scc.git] DEBUG [detached HEAD 5ecd3e4] merge master -Dorg -Ssuccess-only 2024-07-14 00:44:02,804 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:44:02,804 [ scc.repo] DEBUG ## PRs found: 2024-07-14 00:44:03,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-07-14 00:44:03,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-07-14 00:44:04,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-07-14 00:44:04,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-07-14 00:44:05,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:44:05,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-07-14 00:44:05,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:44:05,993 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-07-14 00:44:05,993 [ scc.repo] DEBUG ## Branches found: 2024-07-14 00:44:05,993 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-07-14 00:44:05,994 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:44:05,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:44:06,000 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-14 00:44:06,007 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-14 00:44:06,007 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-14 00:44:06,013 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-14 00:44:06,019 [ scc.git] DEBUG Already up to date. 2024-07-14 00:44:06,020 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-07-14 00:44:06,453 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-07-14 00:44:06,453 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-07-14 00:44:06,460 [ scc.git] DEBUG ## Unique users: [] 2024-07-14 00:44:06,460 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:44:06,460 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:44:06,466 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-07-14 00:44:06,474 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:44:06,482 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-07-14 00:44:06,570 [ scc.git] DEBUG Auto-merging Dockerfile 2024-07-14 00:44:06,570 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-07-14 00:44:06,570 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-14 00:44:06,571 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-14 00:44:06,578 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-07-14 00:44:06,587 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-07-14 00:44:06,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:44:06,758 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-07-14 00:44:06,765 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-07-14 00:44:06,773 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#122](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-07-14 00:44:06,779 [ scc.config] DEBUG Found github.token 2024-07-14 00:44:06,780 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-07-14 00:44:06,780 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-14 00:44:06,821 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:44:06,821 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:44:06,827 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:44:06,872 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-14 00:44:06,880 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fee70684df0> has no local changes 2024-07-14 00:44:06,880 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#122 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/)' 2024-07-14 00:44:06,889 [ scc.git] DEBUG [detached HEAD a0c7028] merge master -Dorg -Ssuccess-only 2024-07-14 00:44:06,890 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:44:06,890 [ scc.git] INFO Overriding base-branch from master to develop 2024-07-14 00:44:06,890 [ scc.repo] DEBUG ## PRs found: 2024-07-14 00:44:07,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-07-14 00:44:07,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-07-14 00:44:08,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-07-14 00:44:08,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-07-14 00:44:09,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-07-14 00:44:09,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-07-14 00:44:10,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-07-14 00:44:10,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-07-14 00:44:11,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-14 00:44:11,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-07-14 00:44:12,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-07-14 00:44:12,078 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-07-14 00:44:12,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-07-14 00:44:13,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-07-14 00:44:13,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-07-14 00:44:14,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-07-14 00:44:14,024 [ scc.repo] DEBUG ## Branches found: 2024-07-14 00:44:14,024 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-07-14 00:44:14,024 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:44:14,025 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:44:14,032 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-07-14 00:44:14,039 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-14 00:44:14,039 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-07-14 00:44:14,046 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-07-14 00:44:14,057 [ scc.git] DEBUG Already up to date. 2024-07-14 00:44:14,057 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-07-14 00:44:14,487 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-07-14 00:44:14,487 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-07-14 00:44:14,492 [ scc.git] DEBUG ## Unique users: [] 2024-07-14 00:44:14,492 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:44:14,492 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:44:14,498 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-14 00:44:14,505 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:44:14,511 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-14 00:44:14,548 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-07-14 00:44:14,548 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-07-14 00:44:14,548 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-14 00:44:14,548 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-14 00:44:14,554 [ scc.git] DEBUG Calling 'git reset --hard c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-07-14 00:44:14,561 [ scc.git] DEBUG HEAD is now at c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-07-14 00:44:14,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:44:14,724 [ scc.git] DEBUG Calling 'git merge-base c20d2734b711c659cecea83db6e2ebd7b7013636 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-14 00:44:14,733 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-07-14 00:44:14,740 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#122](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-07-14 00:44:14,746 [ scc.config] DEBUG Found github.token 2024-07-14 00:44:14,746 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-07-14 00:44:14,747 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-14 00:44:14,788 [ scc.git] DEBUG Get sha1 of %s 2024-07-14 00:44:14,788 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-14 00:44:14,795 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:44:14,836 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-14 00:44:14,844 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fee706f5ee0> has no local changes 2024-07-14 00:44:14,844 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#122 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/)' 2024-07-14 00:44:14,854 [ scc.git] DEBUG [detached HEAD bf6bc68] merge master -Dorg -Ssuccess-only 2024-07-14 00:44:14,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:44:14,855 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-14 00:44:14,935 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-07-14 00:44:15,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:44:15,147 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-07-14 00:44:15,152 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-07-14 00:44:15,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:44:15,569 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-07-14 00:44:15,574 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-07-14 00:44:15,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:44:15,974 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-07-14 00:44:15,979 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-07-14 00:44:16,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:44:16,397 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-07-14 00:44:16,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:44:16,813 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-07-14 00:44:16,818 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-07-14 00:44:17,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:44:17,223 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-07-14 00:44:17,228 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-07-14 00:44:17,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:44:17,634 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-07-14 00:44:17,641 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-07-14 00:44:18,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:44:18,043 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-07-14 00:44:18,048 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-07-14 00:44:18,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:44:18,457 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-07-14 00:44:18,463 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-07-14 00:44:18,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:44:18,855 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-07-14 00:44:18,859 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-07-14 00:44:19,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:44:19,301 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-07-14 00:44:19,305 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-07-14 00:44:19,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:44:19,719 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-07-14 00:44:19,726 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-07-14 00:44:20,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:44:20,128 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-07-14 00:44:20,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:44:20,557 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-07-14 00:44:20,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:44:20,964 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-07-14 00:44:20,969 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-07-14 00:44:21,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:44:21,379 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-07-14 00:44:21,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:44:21,833 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-07-14 00:44:22,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:44:22,235 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-07-14 00:44:22,240 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-07-14 00:44:22,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:44:22,643 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-07-14 00:44:22,651 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-07-14 00:44:23,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:44:23,057 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-07-14 00:44:23,061 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-07-14 00:44:23,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:44:23,483 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-07-14 00:44:23,488 [ scc.config] DEBUG Found submodule.scripts.url 2024-07-14 00:44:23,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-14 00:44:23,900 [ scc.config] DEBUG Found submodule.scripts.branch 2024-07-14 00:44:23,900 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-14 00:44:23,999 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fee79109d60> has local changes 2024-07-14 00:44:24,000 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Repository: ome/omero-cli-zarr Excluded PRs: - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 577 Rdornier 'Fill rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 560 will-moore 'Max projection bytes' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 576 Rdornier 'Color picker - popup update' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#122 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/122/)' 2024-07-14 00:44:24,017 [ scc.git] DEBUG [detached HEAD e01537b] merge master -Dorg -Ssuccess-only 2024-07-14 00:44:24,017 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-07-14 00:44:24,018 [ scc.merge] INFO Repository: ome/omero-plugins 2024-07-14 00:44:24,018 [ scc.merge] INFO Already up to date. 2024-07-14 00:44:24,018 [ scc.merge] INFO 2024-07-14 00:44:24,018 [ scc.merge] INFO 2024-07-14 00:44:24,018 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-07-14 00:44:24,018 [ scc.merge] INFO Already up to date. 2024-07-14 00:44:24,018 [ scc.merge] INFO 2024-07-14 00:44:24,018 [ scc.merge] INFO 2024-07-14 00:44:24,018 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-07-14 00:44:24,018 [ scc.merge] INFO Excluded PRs: 2024-07-14 00:44:24,018 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-07-14 00:44:24,018 [ scc.merge] INFO Already up to date. 2024-07-14 00:44:24,018 [ scc.merge] INFO 2024-07-14 00:44:24,018 [ scc.merge] INFO Merged PRs: 2024-07-14 00:44:24,018 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-07-14 00:44:24,018 [ scc.merge] INFO 2024-07-14 00:44:24,018 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-07-14 00:44:24,018 [ scc.merge] INFO Excluded PRs: 2024-07-14 00:44:24,018 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-07-14 00:44:24,018 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-07-14 00:44:24,018 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-07-14 00:44:24,018 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-07-14 00:44:24,019 [ scc.merge] INFO Already up to date. 2024-07-14 00:44:24,019 [ scc.merge] INFO 2024-07-14 00:44:24,019 [ scc.merge] INFO Merged PRs: 2024-07-14 00:44:24,019 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-07-14 00:44:24,019 [ scc.merge] INFO - PR 63 sbesson 'Remove python-future dependency' 2024-07-14 00:44:24,019 [ scc.merge] INFO - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-07-14 00:44:24,019 [ scc.merge] INFO 2024-07-14 00:44:24,019 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-07-14 00:44:24,019 [ scc.merge] INFO Excluded PRs: 2024-07-14 00:44:24,019 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-07-14 00:44:24,019 [ scc.merge] INFO Already up to date. 2024-07-14 00:44:24,019 [ scc.merge] INFO 2024-07-14 00:44:24,019 [ scc.merge] INFO Merged PRs: 2024-07-14 00:44:24,019 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-07-14 00:44:24,019 [ scc.merge] INFO 2024-07-14 00:44:24,019 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-14 00:44:24,019 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-07-14 00:44:24,019 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-07-14 00:44:24,019 [ scc.merge] INFO 2024-07-14 00:44:24,019 [ scc.merge] INFO Repository: ome/omero-figure 2024-07-14 00:44:24,019 [ scc.merge] INFO Excluded PRs: 2024-07-14 00:44:24,019 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' (user: Rdornier) 2024-07-14 00:44:24,019 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-07-14 00:44:24,019 [ scc.merge] INFO Already up to date. 2024-07-14 00:44:24,019 [ scc.merge] INFO 2024-07-14 00:44:24,019 [ scc.merge] INFO Merged PRs: 2024-07-14 00:44:24,019 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' 2024-07-14 00:44:24,020 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-07-14 00:44:24,020 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes' 2024-07-14 00:44:24,020 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-07-14 00:44:24,020 [ scc.merge] INFO - PR 576 Rdornier 'Color picker - popup update' 2024-07-14 00:44:24,020 [ scc.merge] INFO 2024-07-14 00:44:24,020 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-07-14 00:44:24,020 [ scc.merge] INFO Already up to date. 2024-07-14 00:44:24,020 [ scc.merge] INFO 2024-07-14 00:44:24,020 [ scc.merge] INFO Merged PRs: 2024-07-14 00:44:24,020 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-07-14 00:44:24,020 [ scc.merge] INFO 2024-07-14 00:44:24,020 [ scc.merge] INFO Repository: ome/omero-gallery 2024-07-14 00:44:24,020 [ scc.merge] INFO Already up to date. 2024-07-14 00:44:24,020 [ scc.merge] INFO 2024-07-14 00:44:24,020 [ scc.merge] INFO Merged PRs: 2024-07-14 00:44:24,020 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-07-14 00:44:24,020 [ scc.merge] INFO 2024-07-14 00:44:24,020 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-07-14 00:44:24,020 [ scc.merge] INFO Excluded PRs: 2024-07-14 00:44:24,020 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-07-14 00:44:24,020 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-07-14 00:44:24,020 [ scc.merge] INFO Already up to date. 2024-07-14 00:44:24,020 [ scc.merge] INFO 2024-07-14 00:44:24,020 [ scc.merge] INFO Merged PRs: 2024-07-14 00:44:24,021 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-07-14 00:44:24,021 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-07-14 00:44:24,021 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-07-14 00:44:24,021 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-07-14 00:44:24,021 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-07-14 00:44:24,021 [ scc.merge] INFO 2024-07-14 00:44:24,021 [ scc.merge] INFO Repository: ome/omero-mapr 2024-07-14 00:44:24,021 [ scc.merge] INFO Excluded PRs: 2024-07-14 00:44:24,021 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-07-14 00:44:24,021 [ scc.merge] INFO Already up to date. 2024-07-14 00:44:24,021 [ scc.merge] INFO 2024-07-14 00:44:24,021 [ scc.merge] INFO Merged PRs: 2024-07-14 00:44:24,021 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-07-14 00:44:24,021 [ scc.merge] INFO 2024-07-14 00:44:24,021 [ scc.merge] INFO Repository: ome/omero-metadata 2024-07-14 00:44:24,021 [ scc.merge] INFO Already up to date. 2024-07-14 00:44:24,021 [ scc.merge] INFO 2024-07-14 00:44:24,021 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-14 00:44:24,021 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-07-14 00:44:24,021 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-07-14 00:44:24,021 [ scc.merge] INFO 2024-07-14 00:44:24,021 [ scc.merge] INFO Repository: ome/omero-parade 2024-07-14 00:44:24,021 [ scc.merge] INFO Excluded PRs: 2024-07-14 00:44:24,021 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-07-14 00:44:24,021 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-07-14 00:44:24,021 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-07-14 00:44:24,022 [ scc.merge] INFO Already up to date. 2024-07-14 00:44:24,022 [ scc.merge] INFO 2024-07-14 00:44:24,022 [ scc.merge] INFO Merged PRs: 2024-07-14 00:44:24,022 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-07-14 00:44:24,022 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-07-14 00:44:24,022 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-07-14 00:44:24,022 [ scc.merge] INFO 2024-07-14 00:44:24,022 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-07-14 00:44:24,022 [ scc.merge] INFO Already up to date. 2024-07-14 00:44:24,022 [ scc.merge] INFO 2024-07-14 00:44:24,022 [ scc.merge] INFO Merged PRs: 2024-07-14 00:44:24,022 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-07-14 00:44:24,022 [ scc.merge] INFO 2024-07-14 00:44:24,022 [ scc.merge] INFO Repository: ome/omero-rois 2024-07-14 00:44:24,022 [ scc.merge] INFO Excluded PRs: 2024-07-14 00:44:24,022 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-07-14 00:44:24,022 [ scc.merge] INFO Already up to date. 2024-07-14 00:44:24,022 [ scc.merge] INFO 2024-07-14 00:44:24,022 [ scc.merge] INFO Merged PRs: 2024-07-14 00:44:24,022 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-07-14 00:44:24,022 [ scc.merge] INFO 2024-07-14 00:44:24,022 [ scc.merge] INFO Repository: ome/omero-signup 2024-07-14 00:44:24,022 [ scc.merge] INFO Already up to date. 2024-07-14 00:44:24,022 [ scc.merge] INFO 2024-07-14 00:44:24,022 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-14 00:44:24,023 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-07-14 00:44:24,023 [ scc.merge] INFO 2024-07-14 00:44:24,023 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-07-14 00:44:24,023 [ scc.merge] INFO Already up to date. 2024-07-14 00:44:24,023 [ scc.merge] INFO 2024-07-14 00:44:24,023 [ scc.merge] INFO Merged PRs: 2024-07-14 00:44:24,023 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-07-14 00:44:24,023 [ scc.merge] INFO 2024-07-14 00:44:24,023 [ scc.merge] INFO Repository: ome/omero-upload 2024-07-14 00:44:24,023 [ scc.merge] INFO Already up to date. 2024-07-14 00:44:24,023 [ scc.merge] INFO 2024-07-14 00:44:24,023 [ scc.merge] INFO 2024-07-14 00:44:24,023 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-07-14 00:44:24,023 [ scc.merge] INFO Already up to date. 2024-07-14 00:44:24,023 [ scc.merge] INFO 2024-07-14 00:44:24,023 [ scc.merge] INFO 2024-07-14 00:44:24,023 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-07-14 00:44:24,023 [ scc.merge] INFO Excluded PRs: 2024-07-14 00:44:24,023 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-07-14 00:44:24,023 [ scc.merge] INFO Already up to date. 2024-07-14 00:44:24,023 [ scc.merge] INFO 2024-07-14 00:44:24,023 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-14 00:44:24,023 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-07-14 00:44:24,023 [ scc.merge] INFO 2024-07-14 00:44:24,023 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-07-14 00:44:24,023 [ scc.merge] INFO Already up to date. 2024-07-14 00:44:24,023 [ scc.merge] INFO 2024-07-14 00:44:24,024 [ scc.merge] INFO 2024-07-14 00:44:24,024 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-07-14 00:44:24,024 [ scc.merge] INFO Already up to date. 2024-07-14 00:44:24,024 [ scc.merge] INFO 2024-07-14 00:44:24,024 [ scc.merge] INFO 2024-07-14 00:44:24,024 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-07-14 00:44:24,024 [ scc.merge] INFO Already up to date. 2024-07-14 00:44:24,024 [ scc.merge] INFO 2024-07-14 00:44:24,024 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-14 00:44:24,024 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-07-14 00:44:24,024 [ scc.merge] INFO 2024-07-14 00:44:24,024 [ scc.merge] INFO Repository: ome/scripts 2024-07-14 00:44:24,024 [ scc.merge] INFO Excluded PRs: 2024-07-14 00:44:24,024 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-07-14 00:44:24,024 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-07-14 00:44:24,024 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-07-14 00:44:24,024 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-07-14 00:44:24,024 [ scc.merge] INFO Already up to date. 2024-07-14 00:44:24,024 [ scc.merge] INFO 2024-07-14 00:44:24,024 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-14 00:44:24,024 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-07-14 00:44:24,024 [ scc.merge] INFO 2024-07-14 00:44:24,024 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-07-14 00:44:24,025 [ scc.git] DEBUG Calling 'git remote' 2024-07-14 00:44:24,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-07-14 00:44:24,034 [ scc.git] DEBUG Calling 'git remote' 2024-07-14 00:44:24,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:44:24,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-07-14 00:44:24,041 [ scc.git] DEBUG Calling 'git remote' 2024-07-14 00:44:24,048 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:44:24,048 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-07-14 00:44:24,048 [ scc.git] DEBUG Calling 'git remote' 2024-07-14 00:44:24,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:44:24,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-07-14 00:44:24,055 [ scc.git] DEBUG Calling 'git remote' 2024-07-14 00:44:24,062 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:44:24,063 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-07-14 00:44:24,063 [ scc.git] DEBUG Calling 'git remote' 2024-07-14 00:44:24,072 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:44:24,072 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-07-14 00:44:24,072 [ scc.git] DEBUG Calling 'git remote' 2024-07-14 00:44:24,079 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:44:24,079 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-07-14 00:44:24,079 [ scc.git] DEBUG Calling 'git remote' 2024-07-14 00:44:24,086 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:44:24,086 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-07-14 00:44:24,086 [ scc.git] DEBUG Calling 'git remote' 2024-07-14 00:44:24,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:44:24,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-07-14 00:44:24,092 [ scc.git] DEBUG Calling 'git remote' 2024-07-14 00:44:24,098 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:44:24,099 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-07-14 00:44:24,099 [ scc.git] DEBUG Calling 'git remote' 2024-07-14 00:44:24,105 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:44:24,105 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-07-14 00:44:24,105 [ scc.git] DEBUG Calling 'git remote' 2024-07-14 00:44:24,111 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:44:24,112 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-07-14 00:44:24,112 [ scc.git] DEBUG Calling 'git remote' 2024-07-14 00:44:24,118 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:44:24,118 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-07-14 00:44:24,118 [ scc.git] DEBUG Calling 'git remote' 2024-07-14 00:44:24,124 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:44:24,125 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-07-14 00:44:24,125 [ scc.git] DEBUG Calling 'git remote' 2024-07-14 00:44:24,131 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:44:24,131 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-07-14 00:44:24,131 [ scc.git] DEBUG Calling 'git remote' 2024-07-14 00:44:24,136 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:44:24,137 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-07-14 00:44:24,137 [ scc.git] DEBUG Calling 'git remote' 2024-07-14 00:44:24,142 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:44:24,142 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-07-14 00:44:24,142 [ scc.git] DEBUG Calling 'git remote' 2024-07-14 00:44:24,147 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:44:24,147 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-07-14 00:44:24,147 [ scc.git] DEBUG Calling 'git remote' 2024-07-14 00:44:24,152 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:44:24,152 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-07-14 00:44:24,152 [ scc.git] DEBUG Calling 'git remote' 2024-07-14 00:44:24,157 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:44:24,158 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-07-14 00:44:24,158 [ scc.git] DEBUG Calling 'git remote' 2024-07-14 00:44:24,165 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:44:24,165 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-07-14 00:44:24,165 [ scc.git] DEBUG Calling 'git remote' 2024-07-14 00:44:24,172 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-14 00:44:24,172 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-07-14 00:44:24,173 [ scc.git] DEBUG Calling 'git remote' 2024-07-14 00:44:24,178 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.1 to 5.9.2-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 812d9cf] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from fefe87cf nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from c20d273 nothing to commit, working tree clean [detached HEAD 7339bbd] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-07-14 00:45:11,741 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-07-14 00:45:21,131 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-07-14 00:45:23,550 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-07-14 00:45:28,279 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-07-14 00:46:16,127 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS