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Started by upstream project "Trigger" build number 136 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 296246fd4b5f1e18329dee48f3211ab7ee23ee7c (refs/remotes/origin/master) Commit message: "Merge pull request #382 from ome/dependabot/submodules/omero-figure-fefe87c" > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 296246fd4b5f1e18329dee48f3211ab7ee23ee7c # timeout=10 > git rev-list --no-walk 3ae760e47042efe970407286ec1c6f5fd98f0bc3 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 118 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.1.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.1.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.19-py2.py3-none-any.whl.metadata (49 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.7.4-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.19-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.7.4-py3-none-any.whl (162 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl (3.9 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.7.4 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.8 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.19 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-07-13 00:40:47,296 [ scc.config] DEBUG Found github.token 2024-07-13 00:40:47,299 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-07-13 00:40:47,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:40:47,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:40:48,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-07-13 00:40:48,344 [ scc.gh] DEBUG 3829 remaining from 5000 (Reset at 00:07 2024-07-13 00:40:48,345 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-13 00:40:48,350 [ scc.git] DEBUG Check current status 2024-07-13 00:40:48,350 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-13 00:40:48,355 [ scc.git] DEBUG 296246f Merge pull request #382 from ome/dependabot/submodules/omero-figure-fefe87c 2024-07-13 00:40:48,355 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-13 00:40:48,430 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-07-13 00:40:48,444 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-07-13 00:40:48,452 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-07-13 00:40:48,460 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-07-13 00:40:48,547 [ scc.git] DEBUG fefe87cffc62034eb6bf0f596f2eea4937e9bd4e omero-figure (v7.0.0-13-gfefe87cf) 2024-07-13 00:40:48,550 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-07-13 00:40:48,553 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-07-13 00:40:48,557 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-07-13 00:40:48,560 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-07-13 00:40:48,563 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-07-13 00:40:48,566 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-07-13 00:40:48,568 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-07-13 00:40:48,572 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-07-13 00:40:48,575 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-07-13 00:40:48,578 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-07-13 00:40:48,581 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-07-13 00:40:48,584 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-07-13 00:40:48,587 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-07-13 00:40:48,589 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-07-13 00:40:48,592 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-07-13 00:40:48,595 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-07-13 00:40:48,599 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-07-13 00:40:48,605 [ scc.config] DEBUG Found remote.origin.url 2024-07-13 00:40:48,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-07-13 00:40:49,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-13 00:40:49,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-13 00:40:50,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-13 00:40:50,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-13 00:40:50,568 [ scc.git] DEBUG Resetting... 2024-07-13 00:40:50,568 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-07-13 00:40:50,577 [ scc.git] DEBUG HEAD is now at 296246f Merge pull request #382 from ome/dependabot/submodules/omero-figure-fefe87c 2024-07-13 00:40:50,577 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-07-13 00:40:50,682 [ scc.git] DEBUG Check current status 2024-07-13 00:40:50,682 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-13 00:40:50,687 [ scc.git] DEBUG 296246f Merge pull request #382 from ome/dependabot/submodules/omero-figure-fefe87c 2024-07-13 00:40:50,687 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-13 00:40:50,735 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-07-13 00:40:50,738 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-07-13 00:40:50,741 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-07-13 00:40:50,745 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-07-13 00:40:50,752 [ scc.git] DEBUG fefe87cffc62034eb6bf0f596f2eea4937e9bd4e omero-figure (v7.0.0-13-gfefe87cf) 2024-07-13 00:40:50,756 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-07-13 00:40:50,759 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-07-13 00:40:50,762 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-07-13 00:40:50,765 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-07-13 00:40:50,768 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-07-13 00:40:50,771 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-07-13 00:40:50,773 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-07-13 00:40:50,777 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-07-13 00:40:50,779 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-07-13 00:40:50,783 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-07-13 00:40:50,786 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-07-13 00:40:50,788 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-07-13 00:40:50,791 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-07-13 00:40:50,793 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-07-13 00:40:50,796 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-07-13 00:40:50,799 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-07-13 00:40:50,802 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-07-13 00:40:50,803 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-07-13 00:40:50,803 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-07-13 00:40:50,803 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-07-13 00:40:50,803 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-07-13 00:40:50,804 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-07-13 00:40:50,804 [ scc.repo] DEBUG ## PRs found: 2024-07-13 00:40:51,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-07-13 00:40:51,006 [ scc.repo] DEBUG ## Branches found: 2024-07-13 00:40:51,007 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:40:51,007 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:40:51,011 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-13 00:40:51,014 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-13 00:40:51,014 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-13 00:40:51,018 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-13 00:40:51,022 [ scc.git] DEBUG Already up to date. 2024-07-13 00:40:51,022 [ scc.git] DEBUG ## Unique users: [] 2024-07-13 00:40:51,022 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:40:51,022 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:40:51,026 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-13 00:40:51,077 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:40:51,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:40:51,081 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-13 00:40:51,928 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdcf5b28d60> has no local changes 2024-07-13 00:40:51,929 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Generated by OMERO-plugins-push#121 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/)' 2024-07-13 00:40:52,014 [ scc.git] DEBUG [detached HEAD f5250cd] merge master -Dorg -Snone 2024-07-13 00:40:52,014 [ scc.merge] INFO Repository: ome/omero-plugins 2024-07-13 00:40:52,014 [ scc.merge] INFO Already up to date. 2024-07-13 00:40:52,014 [ scc.merge] INFO 2024-07-13 00:40:52,015 [ scc.merge] INFO 2024-07-13 00:40:52,015 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-07-13 00:40:52,015 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-07-13 00:41:01,156 [ scc.config] DEBUG Found github.token 2024-07-13 00:41:01,159 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-07-13 00:41:01,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:41:01,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:41:02,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-07-13 00:41:02,204 [ scc.gh] DEBUG 3776 remaining from 5000 (Reset at 00:07 2024-07-13 00:41:02,205 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-13 00:41:02,210 [ scc.git] DEBUG Check current status 2024-07-13 00:41:02,210 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-13 00:41:02,214 [ scc.git] DEBUG f5250cd merge master -Dorg -Snone 2024-07-13 00:41:02,214 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-13 00:41:02,260 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-07-13 00:41:02,263 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-07-13 00:41:02,266 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-07-13 00:41:02,269 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-07-13 00:41:02,277 [ scc.git] DEBUG fefe87cffc62034eb6bf0f596f2eea4937e9bd4e omero-figure (v7.0.0-13-gfefe87cf) 2024-07-13 00:41:02,280 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-07-13 00:41:02,283 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-07-13 00:41:02,287 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-07-13 00:41:02,290 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-07-13 00:41:02,294 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-07-13 00:41:02,296 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-07-13 00:41:02,300 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-07-13 00:41:02,303 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-07-13 00:41:02,305 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-07-13 00:41:02,308 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-07-13 00:41:02,311 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-07-13 00:41:02,313 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-07-13 00:41:02,316 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-07-13 00:41:02,318 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-07-13 00:41:02,321 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-07-13 00:41:02,324 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-07-13 00:41:02,328 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-07-13 00:41:02,332 [ scc.config] DEBUG Found remote.origin.url 2024-07-13 00:41:02,333 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-07-13 00:41:02,335 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-07-13 00:41:02,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-07-13 00:41:03,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-13 00:41:03,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-13 00:41:04,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-13 00:41:04,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-13 00:41:04,512 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:41:04,583 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-07-13 00:41:04,583 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-13 00:41:04,587 [ scc.git] DEBUG Check current status 2024-07-13 00:41:04,587 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-13 00:41:04,591 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-07-13 00:41:04,591 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-13 00:41:04,630 [ scc.config] DEBUG Found remote.origin.url 2024-07-13 00:41:05,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-07-13 00:41:05,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-13 00:41:05,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-13 00:41:06,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-13 00:41:06,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-13 00:41:06,768 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:41:06,820 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:41:06,822 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-07-13 00:41:06,822 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-13 00:41:06,827 [ scc.git] DEBUG Check current status 2024-07-13 00:41:06,827 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-13 00:41:06,833 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-07-13 00:41:06,833 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-13 00:41:06,877 [ scc.config] DEBUG Found remote.origin.url 2024-07-13 00:41:07,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-07-13 00:41:07,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-13 00:41:08,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-13 00:41:08,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-13 00:41:09,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-13 00:41:09,042 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:41:09,083 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:41:09,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-07-13 00:41:09,085 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-13 00:41:09,090 [ scc.git] DEBUG Check current status 2024-07-13 00:41:09,090 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-13 00:41:09,095 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-07-13 00:41:09,095 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-13 00:41:09,140 [ scc.config] DEBUG Found remote.origin.url 2024-07-13 00:41:09,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-07-13 00:41:09,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-13 00:41:10,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-13 00:41:10,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-13 00:41:11,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-13 00:41:11,297 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:41:11,336 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:41:11,337 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-07-13 00:41:11,337 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-13 00:41:11,342 [ scc.git] DEBUG Check current status 2024-07-13 00:41:11,343 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-13 00:41:11,347 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-07-13 00:41:11,347 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-13 00:41:11,388 [ scc.config] DEBUG Found remote.origin.url 2024-07-13 00:41:11,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-07-13 00:41:12,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-13 00:41:12,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-13 00:41:13,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-13 00:41:13,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-13 00:41:13,594 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:41:13,633 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:41:13,634 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-07-13 00:41:13,634 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-13 00:41:13,639 [ scc.git] DEBUG Check current status 2024-07-13 00:41:13,639 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-13 00:41:13,662 [ scc.git] DEBUG fefe87cf Merge pull request #575 from Tom-TBT/labelsort 2024-07-13 00:41:13,662 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-13 00:41:13,705 [ scc.config] DEBUG Found remote.origin.url 2024-07-13 00:41:14,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-07-13 00:41:14,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-13 00:41:15,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-13 00:41:15,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-13 00:41:15,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-13 00:41:15,888 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:41:15,933 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:41:15,934 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-07-13 00:41:15,934 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-13 00:41:15,939 [ scc.git] DEBUG Check current status 2024-07-13 00:41:15,940 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-13 00:41:15,944 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-07-13 00:41:15,944 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-13 00:41:15,987 [ scc.config] DEBUG Found remote.origin.url 2024-07-13 00:41:16,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-07-13 00:41:16,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-13 00:41:17,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-13 00:41:17,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-13 00:41:18,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-13 00:41:18,242 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:41:18,285 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:41:18,286 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-07-13 00:41:18,286 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-13 00:41:18,291 [ scc.git] DEBUG Check current status 2024-07-13 00:41:18,291 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-13 00:41:18,295 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-07-13 00:41:18,295 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-13 00:41:18,336 [ scc.config] DEBUG Found remote.origin.url 2024-07-13 00:41:18,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-07-13 00:41:19,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-13 00:41:19,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-13 00:41:20,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-13 00:41:20,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-13 00:41:20,608 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:41:20,650 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:41:20,651 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-07-13 00:41:20,651 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-13 00:41:20,657 [ scc.git] DEBUG Check current status 2024-07-13 00:41:20,657 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-13 00:41:20,662 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-07-13 00:41:20,662 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-13 00:41:20,705 [ scc.config] DEBUG Found remote.origin.url 2024-07-13 00:41:21,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-07-13 00:41:21,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-13 00:41:22,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-13 00:41:22,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-13 00:41:22,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-13 00:41:22,911 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:41:22,954 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:41:22,955 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-07-13 00:41:22,955 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-13 00:41:22,961 [ scc.git] DEBUG Check current status 2024-07-13 00:41:22,961 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-13 00:41:22,966 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-07-13 00:41:22,966 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-13 00:41:23,015 [ scc.config] DEBUG Found remote.origin.url 2024-07-13 00:41:23,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-07-13 00:41:23,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-13 00:41:24,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-13 00:41:24,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-13 00:41:25,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-13 00:41:25,089 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:41:25,132 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:41:25,133 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-07-13 00:41:25,133 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-13 00:41:25,140 [ scc.git] DEBUG Check current status 2024-07-13 00:41:25,140 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-13 00:41:25,145 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-07-13 00:41:25,146 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-13 00:41:25,199 [ scc.config] DEBUG Found remote.origin.url 2024-07-13 00:41:25,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-07-13 00:41:26,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-13 00:41:26,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-13 00:41:26,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-13 00:41:27,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-13 00:41:27,365 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:41:27,405 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:41:27,406 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-07-13 00:41:27,406 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-13 00:41:27,412 [ scc.git] DEBUG Check current status 2024-07-13 00:41:27,412 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-13 00:41:27,416 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-07-13 00:41:27,417 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-13 00:41:27,458 [ scc.config] DEBUG Found remote.origin.url 2024-07-13 00:41:27,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-07-13 00:41:28,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-13 00:41:28,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-13 00:41:29,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-13 00:41:29,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-13 00:41:29,590 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:41:29,634 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:41:29,635 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-07-13 00:41:29,635 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-13 00:41:29,641 [ scc.git] DEBUG Check current status 2024-07-13 00:41:29,641 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-13 00:41:29,646 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-07-13 00:41:29,646 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-13 00:41:29,691 [ scc.config] DEBUG Found remote.origin.url 2024-07-13 00:41:30,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-07-13 00:41:30,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-13 00:41:30,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-13 00:41:31,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-13 00:41:31,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-13 00:41:31,788 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:41:31,826 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:41:31,827 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-07-13 00:41:31,827 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-13 00:41:31,831 [ scc.git] DEBUG Check current status 2024-07-13 00:41:31,831 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-13 00:41:31,835 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-07-13 00:41:31,835 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-13 00:41:31,875 [ scc.config] DEBUG Found remote.origin.url 2024-07-13 00:41:32,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-07-13 00:41:32,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-13 00:41:33,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-13 00:41:33,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-13 00:41:34,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-13 00:41:34,084 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:41:34,126 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:41:34,127 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-07-13 00:41:34,127 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-13 00:41:34,131 [ scc.git] DEBUG Check current status 2024-07-13 00:41:34,132 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-13 00:41:34,136 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-07-13 00:41:34,136 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-13 00:41:34,184 [ scc.config] DEBUG Found remote.origin.url 2024-07-13 00:41:34,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-07-13 00:41:35,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-13 00:41:35,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-13 00:41:35,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-13 00:41:36,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-13 00:41:36,347 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:41:36,387 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:41:36,388 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-07-13 00:41:36,388 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-13 00:41:36,393 [ scc.git] DEBUG Check current status 2024-07-13 00:41:36,393 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-13 00:41:36,398 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-07-13 00:41:36,399 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-13 00:41:36,446 [ scc.config] DEBUG Found remote.origin.url 2024-07-13 00:41:36,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-07-13 00:41:36,784 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-07-13 00:41:37,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-07-13 00:41:37,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-13 00:41:37,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-13 00:41:38,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-13 00:41:38,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-13 00:41:38,762 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:41:38,804 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:41:38,805 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-07-13 00:41:38,805 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-13 00:41:38,810 [ scc.git] DEBUG Check current status 2024-07-13 00:41:38,810 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-13 00:41:38,815 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-07-13 00:41:38,816 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-13 00:41:38,861 [ scc.config] DEBUG Found remote.origin.url 2024-07-13 00:41:39,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-07-13 00:41:39,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-13 00:41:40,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-13 00:41:40,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-13 00:41:41,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-13 00:41:41,044 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:41:41,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:41:41,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-07-13 00:41:41,092 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-13 00:41:41,097 [ scc.git] DEBUG Check current status 2024-07-13 00:41:41,097 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-13 00:41:41,101 [ scc.git] DEBUG deab817 update setup-python to v4 2024-07-13 00:41:41,102 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-13 00:41:41,149 [ scc.config] DEBUG Found remote.origin.url 2024-07-13 00:41:41,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-07-13 00:41:42,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-13 00:41:42,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-13 00:41:42,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-13 00:41:43,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-13 00:41:43,386 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:41:43,426 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:41:43,427 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-07-13 00:41:43,427 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-13 00:41:43,433 [ scc.git] DEBUG Check current status 2024-07-13 00:41:43,433 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-13 00:41:43,437 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-07-13 00:41:43,438 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-13 00:41:43,486 [ scc.config] DEBUG Found remote.origin.url 2024-07-13 00:41:43,487 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-07-13 00:41:43,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-07-13 00:41:44,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-13 00:41:44,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-13 00:41:45,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-13 00:41:45,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-13 00:41:45,541 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:41:45,584 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:41:45,585 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-07-13 00:41:45,585 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-13 00:41:45,590 [ scc.git] DEBUG Check current status 2024-07-13 00:41:45,591 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-13 00:41:45,595 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-07-13 00:41:45,596 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-13 00:41:45,640 [ scc.config] DEBUG Found remote.origin.url 2024-07-13 00:41:45,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-07-13 00:41:45,958 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-07-13 00:41:46,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-07-13 00:41:46,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-13 00:41:47,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-13 00:41:47,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-13 00:41:47,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-13 00:41:47,982 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:41:48,025 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:41:48,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-07-13 00:41:48,027 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-13 00:41:48,032 [ scc.git] DEBUG Check current status 2024-07-13 00:41:48,033 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-13 00:41:48,040 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-07-13 00:41:48,040 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-13 00:41:48,092 [ scc.config] DEBUG Found remote.origin.url 2024-07-13 00:41:48,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-07-13 00:41:48,408 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-07-13 00:41:48,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-07-13 00:41:49,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-13 00:41:49,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-13 00:41:49,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-13 00:41:50,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-13 00:41:50,341 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:41:50,396 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:41:50,398 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-07-13 00:41:50,398 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-13 00:41:50,407 [ scc.git] DEBUG Check current status 2024-07-13 00:41:50,407 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-13 00:41:50,416 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-07-13 00:41:50,416 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-13 00:41:50,474 [ scc.config] DEBUG Found remote.origin.url 2024-07-13 00:41:50,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-07-13 00:41:51,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-13 00:41:51,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-13 00:41:52,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-13 00:41:52,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-13 00:41:52,530 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:41:52,590 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:41:52,592 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-07-13 00:41:52,592 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-13 00:41:52,601 [ scc.git] DEBUG Check current status 2024-07-13 00:41:52,601 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-13 00:41:52,630 [ scc.git] DEBUG c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-07-13 00:41:52,631 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-13 00:41:52,714 [ scc.config] DEBUG Found remote.origin.url 2024-07-13 00:41:52,716 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-07-13 00:41:52,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-07-13 00:41:52,954 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-07-13 00:41:53,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-07-13 00:41:53,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-13 00:41:54,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-13 00:41:54,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-13 00:41:54,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-13 00:41:54,874 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:41:54,944 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:41:54,944 [ scc.git] DEBUG Resetting... 2024-07-13 00:41:54,944 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-07-13 00:41:54,959 [ scc.git] DEBUG HEAD is now at f5250cd merge master -Dorg -Snone 2024-07-13 00:41:54,960 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-07-13 00:41:55,123 [ scc.git] DEBUG Check current status 2024-07-13 00:41:55,124 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-13 00:41:55,135 [ scc.git] DEBUG f5250cd merge master -Dorg -Snone 2024-07-13 00:41:55,136 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-13 00:41:55,206 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-07-13 00:41:55,211 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-07-13 00:41:55,218 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-07-13 00:41:55,224 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-07-13 00:41:55,238 [ scc.git] DEBUG fefe87cffc62034eb6bf0f596f2eea4937e9bd4e omero-figure (v7.0.0-13-gfefe87cf) 2024-07-13 00:41:55,245 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-07-13 00:41:55,250 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-07-13 00:41:55,254 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-07-13 00:41:55,260 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-07-13 00:41:55,263 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-07-13 00:41:55,267 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-07-13 00:41:55,271 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-07-13 00:41:55,277 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-07-13 00:41:55,282 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-07-13 00:41:55,286 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-07-13 00:41:55,290 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-07-13 00:41:55,294 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-07-13 00:41:55,297 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-07-13 00:41:55,301 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-07-13 00:41:55,304 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-07-13 00:41:55,308 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-07-13 00:41:55,312 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-07-13 00:41:55,314 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-07-13 00:41:55,314 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-07-13 00:41:55,314 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-07-13 00:41:55,314 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-07-13 00:41:55,314 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-07-13 00:41:55,314 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-07-13 00:41:55,314 [ scc.repo] DEBUG ## PRs found: 2024-07-13 00:41:55,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-07-13 00:41:55,494 [ scc.repo] DEBUG ## Branches found: 2024-07-13 00:41:55,495 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:41:55,495 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:41:55,502 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-13 00:41:55,510 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-13 00:41:55,511 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-13 00:41:55,519 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-13 00:41:55,528 [ scc.git] DEBUG Already up to date. 2024-07-13 00:41:55,529 [ scc.git] DEBUG ## Unique users: [] 2024-07-13 00:41:55,529 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:41:55,529 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:41:55,537 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-13 00:41:55,605 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:41:55,605 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:41:55,615 [ scc.repo] DEBUG ## PRs found: 2024-07-13 00:41:55,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-07-13 00:41:55,919 [ scc.repo] DEBUG ## Branches found: 2024-07-13 00:41:55,919 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-07-13 00:41:55,919 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:41:55,919 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:41:55,928 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-13 00:41:55,936 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-13 00:41:55,937 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-13 00:41:55,946 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-13 00:41:55,956 [ scc.git] DEBUG Already up to date. 2024-07-13 00:41:55,956 [ scc.git] DEBUG ## Unique users: [] 2024-07-13 00:41:55,957 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:41:55,957 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:41:55,965 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-13 00:41:56,016 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:41:56,016 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:41:56,024 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:41:56,101 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-13 00:41:56,113 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a4b8ccdf0> has no local changes 2024-07-13 00:41:56,113 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#121 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/)' 2024-07-13 00:41:56,130 [ scc.git] DEBUG [detached HEAD ca7509c] merge master -Dorg -Ssuccess-only 2024-07-13 00:41:56,130 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:41:56,131 [ scc.repo] DEBUG ## PRs found: 2024-07-13 00:41:56,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-07-13 00:41:56,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-07-13 00:41:57,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-07-13 00:41:57,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-07-13 00:41:58,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:41:58,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-13 00:41:59,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-07-13 00:42:00,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:42:00,106 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-07-13 00:42:00,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-07-13 00:42:01,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-07-13 00:42:01,085 [ scc.repo] DEBUG ## Branches found: 2024-07-13 00:42:01,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-07-13 00:42:01,085 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:42:01,085 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:42:01,091 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-13 00:42:01,098 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-13 00:42:01,099 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-13 00:42:01,106 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-13 00:42:01,112 [ scc.git] DEBUG Already up to date. 2024-07-13 00:42:01,112 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-07-13 00:42:01,962 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-07-13 00:42:01,962 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-07-13 00:42:01,969 [ scc.git] DEBUG ## Unique users: [] 2024-07-13 00:42:01,969 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:42:01,969 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:42:01,983 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-07-13 00:42:01,992 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:42:01,999 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-07-13 00:42:02,010 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-13 00:42:02,013 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-07-13 00:42:02,013 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-07-13 00:42:02,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:42:02,171 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-13 00:42:02,216 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:42:02,216 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:42:02,222 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:42:02,280 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-13 00:42:02,287 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a4a877c70> has no local changes 2024-07-13 00:42:02,288 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#121 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/)' 2024-07-13 00:42:02,299 [ scc.git] DEBUG [detached HEAD 8a67a36] merge master -Dorg -Ssuccess-only 2024-07-13 00:42:02,299 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:42:02,299 [ scc.repo] DEBUG ## PRs found: 2024-07-13 00:42:02,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-07-13 00:42:06,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64 HTTP/1.1" 200 None 2024-07-13 00:42:06,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64/comments HTTP/1.1" 200 None 2024-07-13 00:42:07,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-07-13 00:42:07,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:42:08,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-07-13 00:42:08,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/6dffdfe0e7ed620e791de943fad823e440b40639?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:42:08,664 [ scc.repo] DEBUG - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-07-13 00:42:09,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/63 HTTP/1.1" 200 None 2024-07-13 00:42:09,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-07-13 00:42:10,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:42:10,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-07-13 00:42:11,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:42:11,278 [ scc.repo] DEBUG - PR 63 sbesson 'Remove python-future dependency' 2024-07-13 00:42:11,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-07-13 00:42:12,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-07-13 00:42:12,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-07-13 00:42:13,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-07-13 00:42:13,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-07-13 00:42:14,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:42:14,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-07-13 00:42:15,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:42:15,065 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-07-13 00:42:15,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-07-13 00:42:16,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-07-13 00:42:16,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-07-13 00:42:16,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-07-13 00:42:17,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-07-13 00:42:17,418 [ scc.repo] DEBUG ## Branches found: 2024-07-13 00:42:17,418 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-07-13 00:42:17,419 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:42:17,419 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:42:17,426 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-13 00:42:17,433 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-13 00:42:17,434 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-13 00:42:17,442 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-13 00:42:17,450 [ scc.git] DEBUG Already up to date. 2024-07-13 00:42:17,450 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-07-13 00:42:17,900 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-07-13 00:42:17,900 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-07-13 00:42:17,907 [ scc.git] DEBUG Calling 'git fetch origin pull/63/head' 2024-07-13 00:42:18,312 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-07-13 00:42:18,313 [ scc.git] DEBUG * branch refs/pull/63/head -> FETCH_HEAD 2024-07-13 00:42:18,319 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-07-13 00:42:18,762 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-07-13 00:42:18,762 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-07-13 00:42:18,768 [ scc.git] DEBUG ## Unique users: [] 2024-07-13 00:42:18,768 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:42:18,768 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:42:18,775 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-07-13 00:42:18,783 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:42:18,789 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-07-13 00:42:18,800 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-13 00:42:18,803 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-07-13 00:42:18,803 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-07-13 00:42:18,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:42:18,970 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-07-13 00:42:18,977 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:42:18,984 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 63 (Remove python-future dependency) f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-07-13 00:42:19,026 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-07-13 00:42:19,027 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-13 00:42:19,030 [ scc.git] DEBUG setup.py | 3 +-- 2024-07-13 00:42:19,030 [ scc.git] DEBUG src/omero_cli_render.py | 9 ++------- 2024-07-13 00:42:19,031 [ scc.git] DEBUG test/integration/clitest/test_render.py | 6 +----- 2024-07-13 00:42:19,031 [ scc.git] DEBUG 3 files changed, 4 insertions(+), 14 deletions(-) 2024-07-13 00:42:19,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:42:19,390 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dffdfe0e7ed620e791de943fad823e440b40639' 2024-07-13 00:42:19,399 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:42:19,405 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Fix thumbnail generation with missing rendering definition) 6dffdfe0e7ed620e791de943fad823e440b40639' 2024-07-13 00:42:19,457 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-07-13 00:42:19,457 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_render.py 2024-07-13 00:42:19,457 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-13 00:42:19,461 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++++++++-- 2024-07-13 00:42:19,461 [ scc.git] DEBUG test/integration/clitest/test_render.py | 12 ++++++++++++ 2024-07-13 00:42:19,461 [ scc.git] DEBUG 2 files changed, 24 insertions(+), 2 deletions(-) 2024-07-13 00:42:19,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:42:19,790 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-13 00:42:19,831 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:42:19,831 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:42:19,838 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:42:19,879 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-13 00:42:19,887 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a4b957f70> has no local changes 2024-07-13 00:42:19,887 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Generated by OMERO-plugins-push#121 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/)' 2024-07-13 00:42:19,898 [ scc.git] DEBUG [detached HEAD 48343da] merge master -Dorg -Ssuccess-only 2024-07-13 00:42:19,898 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:42:19,898 [ scc.repo] DEBUG ## PRs found: 2024-07-13 00:42:20,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-07-13 00:42:20,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-07-13 00:42:21,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-07-13 00:42:21,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-07-13 00:42:22,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:42:22,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-13 00:42:23,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-07-13 00:42:23,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-07-13 00:42:24,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-07-13 00:42:24,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-07-13 00:42:24,566 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-07-13 00:42:25,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-07-13 00:42:25,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-07-13 00:42:26,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-07-13 00:42:26,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-07-13 00:42:27,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:42:27,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-07-13 00:42:27,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:42:27,958 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-07-13 00:42:28,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-07-13 00:42:28,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-07-13 00:42:29,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-07-13 00:42:30,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-07-13 00:42:30,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:42:31,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-07-13 00:42:31,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:42:31,436 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-07-13 00:42:31,436 [ scc.repo] DEBUG ## Branches found: 2024-07-13 00:42:31,436 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-07-13 00:42:31,437 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:42:31,437 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:42:31,444 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-13 00:42:31,450 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-13 00:42:31,450 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-13 00:42:31,456 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-13 00:42:31,463 [ scc.git] DEBUG Already up to date. 2024-07-13 00:42:31,464 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-07-13 00:42:31,904 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-07-13 00:42:31,905 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-07-13 00:42:31,910 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-07-13 00:42:32,349 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-07-13 00:42:32,349 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-07-13 00:42:32,354 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-07-13 00:42:32,806 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-07-13 00:42:32,806 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-07-13 00:42:32,811 [ scc.git] DEBUG ## Unique users: [] 2024-07-13 00:42:32,812 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:42:32,812 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:42:32,819 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-07-13 00:42:32,827 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:42:32,833 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-07-13 00:42:32,862 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-07-13 00:42:32,862 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-07-13 00:42:32,863 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-07-13 00:42:32,863 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-13 00:42:32,863 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-13 00:42:32,870 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-07-13 00:42:32,878 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-07-13 00:42:33,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:42:33,043 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-07-13 00:42:33,051 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-07-13 00:42:33,058 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#121](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-07-13 00:42:33,063 [ scc.config] DEBUG Found github.token 2024-07-13 00:42:33,064 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-07-13 00:42:33,064 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-07-13 00:42:33,071 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:42:33,077 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-07-13 00:42:33,129 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-07-13 00:42:33,129 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-07-13 00:42:33,129 [ scc.git] DEBUG Auto-merging setup.py 2024-07-13 00:42:33,129 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-07-13 00:42:33,129 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-07-13 00:42:33,129 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-07-13 00:42:33,129 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-07-13 00:42:33,129 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-13 00:42:33,129 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-13 00:42:33,136 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-07-13 00:42:33,143 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-07-13 00:42:33,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:42:33,458 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-07-13 00:42:33,465 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-07-13 00:42:33,472 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#121](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-07-13 00:42:33,478 [ scc.config] DEBUG Found github.token 2024-07-13 00:42:33,478 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-07-13 00:42:33,478 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-07-13 00:42:33,485 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:42:33,491 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-07-13 00:42:33,508 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-07-13 00:42:33,508 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-07-13 00:42:33,509 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-13 00:42:33,512 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-07-13 00:42:33,512 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-07-13 00:42:33,512 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-07-13 00:42:33,512 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-07-13 00:42:33,512 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-07-13 00:42:33,513 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-07-13 00:42:33,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:42:33,876 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-13 00:42:33,920 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:42:33,921 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:42:33,926 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:42:33,967 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-13 00:42:33,974 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a4a82e4c0> has no local changes 2024-07-13 00:42:33,975 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#121 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/)' 2024-07-13 00:42:33,985 [ scc.git] DEBUG [detached HEAD dade816] merge master -Dorg -Ssuccess-only 2024-07-13 00:42:33,985 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:42:33,985 [ scc.repo] DEBUG ## PRs found: 2024-07-13 00:42:34,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-07-13 00:42:34,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-07-13 00:42:35,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-07-13 00:42:35,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/576 HTTP/1.1" 200 None 2024-07-13 00:42:36,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/576/comments HTTP/1.1" 200 None 2024-07-13 00:42:36,281 [ scc.repo] DEBUG # ... Include label: include 2024-07-13 00:42:36,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/88901984c22249d20925e53c455cd822700be6d4 HTTP/1.1" 200 None 2024-07-13 00:42:37,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/88901984c22249d20925e53c455cd822700be6d4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:42:37,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/88901984c22249d20925e53c455cd822700be6d4/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-13 00:42:38,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/88901984c22249d20925e53c455cd822700be6d4 HTTP/1.1" 200 None 2024-07-13 00:42:38,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/88901984c22249d20925e53c455cd822700be6d4?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:42:38,605 [ scc.repo] DEBUG - PR 576 Rdornier 'Color picker - popup update' 2024-07-13 00:42:39,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None 2024-07-13 00:42:39,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None 2024-07-13 00:42:40,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-07-13 00:42:40,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:42:41,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-13 00:42:41,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-07-13 00:42:42,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:42:42,221 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-07-13 00:42:42,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560 HTTP/1.1" 200 None 2024-07-13 00:42:43,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560/comments HTTP/1.1" 200 None 2024-07-13 00:42:43,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c HTTP/1.1" 200 None 2024-07-13 00:42:44,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:42:44,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-13 00:42:45,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c HTTP/1.1" 200 None 2024-07-13 00:42:45,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:42:45,683 [ scc.repo] DEBUG - PR 560 will-moore 'Max projection bytes' 2024-07-13 00:42:46,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-07-13 00:42:46,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-07-13 00:42:47,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-07-13 00:42:47,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:42:48,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-13 00:42:48,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-07-13 00:42:49,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:42:49,263 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-07-13 00:42:49,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-07-13 00:42:50,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549/comments HTTP/1.1" 200 None 2024-07-13 00:42:50,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77 HTTP/1.1" 200 None 2024-07-13 00:42:51,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:42:51,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-13 00:42:52,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77 HTTP/1.1" 200 None 2024-07-13 00:42:52,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/f7d26b972bfe9a7105c4f94776748446f2395c77?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:42:52,670 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature' 2024-07-13 00:42:52,671 [ scc.repo] DEBUG ## Branches found: 2024-07-13 00:42:52,671 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-07-13 00:42:52,671 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:42:52,671 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:42:52,681 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-13 00:42:52,691 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-13 00:42:52,691 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-13 00:42:52,702 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-13 00:42:52,715 [ scc.git] DEBUG Already up to date. 2024-07-13 00:42:52,715 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head' 2024-07-13 00:42:53,263 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-07-13 00:42:53,264 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD 2024-07-13 00:42:53,271 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-07-13 00:42:53,854 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-07-13 00:42:53,854 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-07-13 00:42:53,861 [ scc.git] DEBUG Calling 'git fetch origin pull/560/head' 2024-07-13 00:42:54,725 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-07-13 00:42:54,726 [ scc.git] DEBUG * branch refs/pull/560/head -> FETCH_HEAD 2024-07-13 00:42:54,733 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head' 2024-07-13 00:42:55,178 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-07-13 00:42:55,178 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD 2024-07-13 00:42:55,186 [ scc.git] DEBUG Calling 'git fetch origin pull/576/head' 2024-07-13 00:42:55,802 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-07-13 00:42:55,802 [ scc.git] DEBUG * branch refs/pull/576/head -> FETCH_HEAD 2024-07-13 00:42:55,805 [ scc.git] DEBUG ## Unique users: [] 2024-07-13 00:42:55,806 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:42:55,806 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:42:55,812 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f7d26b972bfe9a7105c4f94776748446f2395c77' 2024-07-13 00:42:55,821 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:42:55,828 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) f7d26b972bfe9a7105c4f94776748446f2395c77' 2024-07-13 00:42:55,915 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-07-13 00:42:55,917 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-13 00:42:55,927 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++- 2024-07-13 00:42:55,927 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++++ 2024-07-13 00:42:55,927 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++ 2024-07-13 00:42:55,927 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 +++++++++++++- 2024-07-13 00:42:55,927 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 + 2024-07-13 00:42:55,927 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++- 2024-07-13 00:42:55,927 [ scc.git] DEBUG src/js/views/right_panel_view.js | 74 +++++++++++++++++++++++++++++- 2024-07-13 00:42:55,927 [ scc.git] DEBUG src/js/views/util.js | 54 ++++++++++++++++++++++ 2024-07-13 00:42:55,927 [ scc.git] DEBUG src/templates/rois_form.template.html | 8 ++++ 2024-07-13 00:42:55,927 [ scc.git] DEBUG 9 files changed, 271 insertions(+), 5 deletions(-) 2024-07-13 00:42:56,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:42:56,092 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-07-13 00:42:56,103 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:42:56,110 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-07-13 00:42:56,364 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-07-13 00:42:56,365 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-07-13 00:42:56,365 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-07-13 00:42:56,365 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-07-13 00:42:56,366 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-13 00:42:56,375 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-07-13 00:42:56,375 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-07-13 00:42:56,375 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-07-13 00:42:56,375 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-07-13 00:42:56,375 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-07-13 00:42:56,375 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++- 2024-07-13 00:42:56,375 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +- 2024-07-13 00:42:56,375 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-07-13 00:42:56,375 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-07-13 00:42:56,376 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-07-13 00:42:56,376 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-) 2024-07-13 00:42:56,376 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-07-13 00:42:56,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:42:56,542 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c' 2024-07-13 00:42:56,570 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:42:56,581 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 560 (Max projection bytes) 3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c' 2024-07-13 00:42:56,888 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-07-13 00:42:56,889 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-07-13 00:42:56,889 [ scc.git] DEBUG Auto-merging src/index.html 2024-07-13 00:42:56,889 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2024-07-13 00:42:56,889 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-07-13 00:42:56,889 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-07-13 00:42:56,889 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-13 00:42:56,897 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 24 +++++++-- 2024-07-13 00:42:56,897 [ scc.git] DEBUG omero_figure/urls.py | 10 +++- 2024-07-13 00:42:56,897 [ scc.git] DEBUG omero_figure/views.py | 58 ++++++++++++++++++++++ 2024-07-13 00:42:56,897 [ scc.git] DEBUG src/css/figure.css | 5 -- 2024-07-13 00:42:56,897 [ scc.git] DEBUG src/index.html | 1 + 2024-07-13 00:42:56,897 [ scc.git] DEBUG src/js/models/figure_model.js | 29 ++++++++++- 2024-07-13 00:42:56,897 [ scc.git] DEBUG src/js/models/panel_model.js | 29 ++++++++++- 2024-07-13 00:42:56,897 [ scc.git] DEBUG src/js/views/info_panel_view.js | 3 +- 2024-07-13 00:42:56,897 [ scc.git] DEBUG src/js/views/modal_views.js | 2 + 2024-07-13 00:42:56,897 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +- 2024-07-13 00:42:56,897 [ scc.git] DEBUG src/js/views/right_panel_view.js | 5 ++ 2024-07-13 00:42:56,897 [ scc.git] DEBUG src/js/views/scalebar_form_view.js | 3 +- 2024-07-13 00:42:56,898 [ scc.git] DEBUG src/templates/image_display_options.template.html | 4 +- 2024-07-13 00:42:56,898 [ scc.git] DEBUG src/templates/info_panel.template.html | 2 + 2024-07-13 00:42:56,898 [ scc.git] DEBUG 14 files changed, 162 insertions(+), 15 deletions(-) 2024-07-13 00:42:57,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:42:57,060 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-07-13 00:42:57,070 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:42:57,076 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-07-13 00:42:57,130 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-13 00:42:57,134 [ scc.git] DEBUG setup.py | 2 +- 2024-07-13 00:42:57,134 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-07-13 00:42:57,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:42:57,482 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...88901984c22249d20925e53c455cd822700be6d4' 2024-07-13 00:42:57,492 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:42:57,498 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 576 (Color picker - popup update) 88901984c22249d20925e53c455cd822700be6d4' 2024-07-13 00:42:57,519 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-07-13 00:42:57,519 [ scc.git] DEBUG Auto-merging src/index.html 2024-07-13 00:42:57,520 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-13 00:42:57,524 [ scc.git] DEBUG .gitignore | 2 +- 2024-07-13 00:42:57,524 [ scc.git] DEBUG src/css/figure.css | 3 +++ 2024-07-13 00:42:57,524 [ scc.git] DEBUG src/index.html | 3 +++ 2024-07-13 00:42:57,524 [ scc.git] DEBUG src/js/views/colorpicker.js | 10 ++++++++-- 2024-07-13 00:42:57,524 [ scc.git] DEBUG 4 files changed, 15 insertions(+), 3 deletions(-) 2024-07-13 00:42:57,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:42:57,888 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-13 00:42:57,938 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:42:57,938 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:42:57,943 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:42:57,987 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-13 00:42:57,996 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a2b7c1640> has no local changes 2024-07-13 00:42:57,997 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 577 Rdornier 'Fill rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 560 will-moore 'Max projection bytes' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 576 Rdornier 'Color picker - popup update' Generated by OMERO-plugins-push#121 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/)' 2024-07-13 00:42:58,017 [ scc.git] DEBUG [detached HEAD 0c36ca10] merge master -Dorg -Ssuccess-only 2024-07-13 00:42:58,017 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:42:58,017 [ scc.repo] DEBUG ## PRs found: 2024-07-13 00:42:58,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-07-13 00:42:58,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-07-13 00:42:59,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-07-13 00:42:59,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-07-13 00:43:00,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:43:00,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-07-13 00:43:01,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:43:01,332 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-07-13 00:43:01,333 [ scc.repo] DEBUG ## Branches found: 2024-07-13 00:43:01,333 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-07-13 00:43:01,333 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:43:01,333 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:01,340 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-13 00:43:01,346 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-13 00:43:01,346 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-13 00:43:01,352 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-13 00:43:01,358 [ scc.git] DEBUG Already up to date. 2024-07-13 00:43:01,359 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-07-13 00:43:01,739 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-07-13 00:43:01,740 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-07-13 00:43:01,746 [ scc.git] DEBUG ## Unique users: [] 2024-07-13 00:43:01,746 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:43:01,747 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:01,755 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-07-13 00:43:01,764 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:01,771 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-07-13 00:43:01,805 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-07-13 00:43:01,806 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-13 00:43:01,810 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-07-13 00:43:01,810 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-07-13 00:43:01,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:43:01,974 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-13 00:43:02,020 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:43:02,021 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:02,028 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:43:02,072 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-13 00:43:02,081 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a4a867f40> has no local changes 2024-07-13 00:43:02,081 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#121 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/)' 2024-07-13 00:43:02,091 [ scc.git] DEBUG [detached HEAD 1e9df15] merge master -Dorg -Ssuccess-only 2024-07-13 00:43:02,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:43:02,092 [ scc.repo] DEBUG ## PRs found: 2024-07-13 00:43:02,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-07-13 00:43:02,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-07-13 00:43:02,952 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-13 00:43:03,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-07-13 00:43:04,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:43:04,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-13 00:43:04,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-07-13 00:43:05,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:43:05,415 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-07-13 00:43:05,415 [ scc.repo] DEBUG ## Branches found: 2024-07-13 00:43:05,415 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-07-13 00:43:05,415 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:43:05,415 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:05,426 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-13 00:43:05,437 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-13 00:43:05,437 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-13 00:43:05,448 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-13 00:43:05,459 [ scc.git] DEBUG Already up to date. 2024-07-13 00:43:05,459 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-07-13 00:43:05,849 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-07-13 00:43:05,849 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-07-13 00:43:05,855 [ scc.git] DEBUG ## Unique users: [] 2024-07-13 00:43:05,855 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:43:05,855 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:05,865 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-07-13 00:43:05,874 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:05,880 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-07-13 00:43:05,893 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-13 00:43:05,898 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-07-13 00:43:05,898 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-07-13 00:43:06,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:43:06,066 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-13 00:43:06,128 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:43:06,128 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:06,137 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:43:06,190 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-13 00:43:06,201 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a2b7cdfa0> has no local changes 2024-07-13 00:43:06,201 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#121 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/)' 2024-07-13 00:43:06,216 [ scc.git] DEBUG [detached HEAD 955e79a] merge master -Dorg -Ssuccess-only 2024-07-13 00:43:06,216 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:43:06,217 [ scc.repo] DEBUG ## PRs found: 2024-07-13 00:43:06,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-07-13 00:43:07,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-07-13 00:43:07,086 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-13 00:43:07,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-07-13 00:43:08,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:43:08,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-13 00:43:09,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-07-13 00:43:09,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:43:09,750 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-07-13 00:43:10,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-07-13 00:43:10,252 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-13 00:43:10,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-07-13 00:43:11,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:43:12,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-13 00:43:12,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-07-13 00:43:13,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:43:13,049 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-07-13 00:43:13,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-07-13 00:43:13,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-07-13 00:43:14,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-07-13 00:43:15,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:43:15,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-13 00:43:16,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-07-13 00:43:16,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:43:16,522 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-07-13 00:43:16,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-07-13 00:43:17,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-07-13 00:43:18,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-07-13 00:43:18,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:43:18,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-13 00:43:19,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-07-13 00:43:19,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:43:19,844 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-07-13 00:43:20,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-07-13 00:43:20,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-07-13 00:43:21,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-07-13 00:43:21,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:43:22,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-07-13 00:43:22,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:43:22,652 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-07-13 00:43:22,652 [ scc.repo] DEBUG ## Branches found: 2024-07-13 00:43:22,652 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-07-13 00:43:22,652 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:43:22,653 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:22,661 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-13 00:43:22,672 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-13 00:43:22,672 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-13 00:43:22,718 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-13 00:43:22,726 [ scc.git] DEBUG Already up to date. 2024-07-13 00:43:22,727 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-07-13 00:43:23,121 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-07-13 00:43:23,121 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-07-13 00:43:23,126 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-07-13 00:43:23,904 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-07-13 00:43:23,904 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-07-13 00:43:23,910 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-07-13 00:43:24,319 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-07-13 00:43:24,319 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-07-13 00:43:24,324 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-07-13 00:43:24,742 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-07-13 00:43:24,743 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-07-13 00:43:24,748 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-07-13 00:43:25,146 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-07-13 00:43:25,147 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-07-13 00:43:25,152 [ scc.git] DEBUG ## Unique users: [] 2024-07-13 00:43:25,152 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:43:25,152 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:25,158 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-07-13 00:43:25,166 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:25,173 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-07-13 00:43:25,244 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-07-13 00:43:25,245 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-13 00:43:25,249 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-07-13 00:43:25,249 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-07-13 00:43:25,249 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-07-13 00:43:25,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:43:25,436 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-07-13 00:43:25,444 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:25,450 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-07-13 00:43:25,576 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-07-13 00:43:25,577 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-07-13 00:43:25,577 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-07-13 00:43:25,577 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-07-13 00:43:25,577 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-13 00:43:25,582 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-07-13 00:43:25,582 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-07-13 00:43:25,582 [ scc.git] DEBUG src/app/header.html | 5 + 2024-07-13 00:43:25,582 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-07-13 00:43:25,582 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-07-13 00:43:25,582 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-07-13 00:43:25,582 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-07-13 00:43:25,582 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-07-13 00:43:25,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:43:25,838 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-07-13 00:43:25,846 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:25,851 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-07-13 00:43:25,908 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-07-13 00:43:25,909 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-13 00:43:25,912 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-07-13 00:43:25,912 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-07-13 00:43:25,912 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-07-13 00:43:26,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:43:26,243 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-07-13 00:43:26,257 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:26,263 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-07-13 00:43:26,324 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-13 00:43:26,339 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-07-13 00:43:26,339 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-07-13 00:43:26,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:43:26,643 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-07-13 00:43:26,669 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:26,675 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-07-13 00:43:26,750 [ scc.git] DEBUG Auto-merging package-lock.json 2024-07-13 00:43:26,751 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-13 00:43:27,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:43:27,083 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-13 00:43:27,129 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:43:27,130 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:27,135 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:43:27,180 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-13 00:43:27,191 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a4a889df0> has no local changes 2024-07-13 00:43:27,191 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' Generated by OMERO-plugins-push#121 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/)' 2024-07-13 00:43:27,202 [ scc.git] DEBUG [detached HEAD ba67b02] merge master -Dorg -Ssuccess-only 2024-07-13 00:43:27,202 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:43:27,203 [ scc.repo] DEBUG ## PRs found: 2024-07-13 00:43:27,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-07-13 00:43:28,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-07-13 00:43:28,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-07-13 00:43:29,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-07-13 00:43:29,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:43:30,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-13 00:43:30,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-07-13 00:43:30,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:43:30,940 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-07-13 00:43:30,940 [ scc.repo] DEBUG ## Branches found: 2024-07-13 00:43:30,941 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-07-13 00:43:30,941 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:43:30,941 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:30,953 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-13 00:43:30,961 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-13 00:43:30,961 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-13 00:43:30,969 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-13 00:43:30,977 [ scc.git] DEBUG Already up to date. 2024-07-13 00:43:30,978 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-07-13 00:43:31,388 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-07-13 00:43:31,388 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-07-13 00:43:31,395 [ scc.git] DEBUG ## Unique users: [] 2024-07-13 00:43:31,396 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:43:31,396 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:31,402 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-07-13 00:43:31,409 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:31,415 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-07-13 00:43:31,426 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-13 00:43:31,429 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-07-13 00:43:31,430 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-07-13 00:43:31,430 [ scc.git] DEBUG requirements.txt | 2 +- 2024-07-13 00:43:31,430 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-07-13 00:43:31,430 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-07-13 00:43:31,430 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-07-13 00:43:31,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:43:31,592 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-13 00:43:31,646 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:43:31,646 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:31,653 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:43:31,697 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-13 00:43:31,706 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a2877f610> has no local changes 2024-07-13 00:43:31,706 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#121 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/)' 2024-07-13 00:43:31,717 [ scc.git] DEBUG [detached HEAD 1c12712] merge master -Dorg -Ssuccess-only 2024-07-13 00:43:31,718 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:43:31,718 [ scc.repo] DEBUG ## PRs found: 2024-07-13 00:43:32,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-07-13 00:43:32,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-07-13 00:43:33,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-07-13 00:43:33,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-07-13 00:43:34,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:43:34,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-07-13 00:43:35,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:43:35,027 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-07-13 00:43:35,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-07-13 00:43:35,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-07-13 00:43:36,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-07-13 00:43:36,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:43:37,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-07-13 00:43:37,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:43:37,760 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-07-13 00:43:37,761 [ scc.repo] DEBUG ## Branches found: 2024-07-13 00:43:37,761 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-07-13 00:43:37,761 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:43:37,761 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:37,767 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-13 00:43:37,772 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-13 00:43:37,772 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-13 00:43:37,778 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-13 00:43:37,784 [ scc.git] DEBUG Already up to date. 2024-07-13 00:43:37,784 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-07-13 00:43:38,467 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-07-13 00:43:38,467 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-07-13 00:43:38,473 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-07-13 00:43:39,090 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-07-13 00:43:39,091 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-07-13 00:43:39,096 [ scc.git] DEBUG ## Unique users: [] 2024-07-13 00:43:39,096 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:43:39,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:39,103 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-07-13 00:43:39,115 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:39,122 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-07-13 00:43:39,228 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-07-13 00:43:39,228 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-07-13 00:43:39,229 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-07-13 00:43:39,229 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-07-13 00:43:39,229 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-13 00:43:39,229 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-13 00:43:39,236 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-07-13 00:43:39,244 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-07-13 00:43:39,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:43:39,402 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-07-13 00:43:39,410 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-07-13 00:43:39,418 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#121](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-07-13 00:43:39,423 [ scc.config] DEBUG Found github.token 2024-07-13 00:43:39,424 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-07-13 00:43:39,424 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-07-13 00:43:39,431 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:39,437 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-07-13 00:43:39,521 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-07-13 00:43:39,521 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-07-13 00:43:39,522 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-07-13 00:43:39,522 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-13 00:43:39,522 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-13 00:43:39,529 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-07-13 00:43:39,537 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-07-13 00:43:39,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:43:39,820 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-07-13 00:43:39,827 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-07-13 00:43:39,834 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#121](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-07-13 00:43:39,840 [ scc.config] DEBUG Found github.token 2024-07-13 00:43:39,841 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-07-13 00:43:39,841 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-13 00:43:39,887 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:43:39,887 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:39,893 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:43:39,940 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-13 00:43:39,948 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a2877f8b0> has no local changes 2024-07-13 00:43:39,948 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#121 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/)' 2024-07-13 00:43:39,959 [ scc.git] DEBUG [detached HEAD 9ab9542] merge master -Dorg -Ssuccess-only 2024-07-13 00:43:39,959 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:43:39,959 [ scc.repo] DEBUG ## PRs found: 2024-07-13 00:43:40,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-07-13 00:43:40,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-07-13 00:43:40,846 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-13 00:43:41,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-07-13 00:43:41,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:43:42,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-13 00:43:43,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-07-13 00:43:43,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:43:43,451 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-07-13 00:43:43,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-07-13 00:43:43,934 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-13 00:43:44,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-07-13 00:43:44,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:43:45,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-13 00:43:46,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-07-13 00:43:46,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:43:46,477 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-07-13 00:43:46,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-07-13 00:43:46,935 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-13 00:43:47,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-07-13 00:43:48,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:43:48,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-13 00:43:49,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-07-13 00:43:49,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:43:49,663 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-07-13 00:43:50,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-07-13 00:43:50,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-07-13 00:43:51,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-07-13 00:43:51,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-07-13 00:43:52,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-07-13 00:43:52,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-07-13 00:43:52,552 [ scc.repo] DEBUG ## Branches found: 2024-07-13 00:43:52,552 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-07-13 00:43:52,553 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:43:52,553 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:52,561 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-13 00:43:52,567 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-13 00:43:52,567 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-13 00:43:52,573 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-13 00:43:52,580 [ scc.git] DEBUG Already up to date. 2024-07-13 00:43:52,580 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-07-13 00:43:52,979 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-07-13 00:43:52,980 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-07-13 00:43:52,986 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-07-13 00:43:53,363 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-07-13 00:43:53,364 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-07-13 00:43:53,372 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-07-13 00:43:53,769 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-07-13 00:43:53,770 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-07-13 00:43:53,776 [ scc.git] DEBUG ## Unique users: [] 2024-07-13 00:43:53,776 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:43:53,776 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:53,786 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-07-13 00:43:53,794 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:53,801 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-07-13 00:43:53,814 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-13 00:43:53,817 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-07-13 00:43:53,817 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-07-13 00:43:53,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:43:53,986 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-07-13 00:43:53,995 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:54,001 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-07-13 00:43:54,014 [ scc.git] DEBUG Auto-merging package-lock.json 2024-07-13 00:43:54,016 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-13 00:43:54,019 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-07-13 00:43:54,019 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-07-13 00:43:54,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:43:54,400 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-07-13 00:43:54,407 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:54,413 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-07-13 00:43:54,425 [ scc.git] DEBUG Auto-merging package-lock.json 2024-07-13 00:43:54,425 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-13 00:43:54,429 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-07-13 00:43:54,429 [ scc.git] DEBUG package.json | 2 +- 2024-07-13 00:43:54,429 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-07-13 00:43:54,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:43:54,818 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-13 00:43:54,867 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:43:54,868 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:54,874 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:43:54,918 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-13 00:43:54,927 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a2877f670> has no local changes 2024-07-13 00:43:54,928 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#121 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/)' 2024-07-13 00:43:54,950 [ scc.git] DEBUG [detached HEAD 4cae062] merge master -Dorg -Ssuccess-only 2024-07-13 00:43:54,950 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:43:54,951 [ scc.repo] DEBUG ## PRs found: 2024-07-13 00:43:55,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-07-13 00:43:55,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-07-13 00:43:56,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-07-13 00:43:56,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:43:57,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-07-13 00:43:57,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:43:57,830 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-07-13 00:43:57,830 [ scc.repo] DEBUG ## Branches found: 2024-07-13 00:43:57,830 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-07-13 00:43:57,831 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:43:57,831 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:57,837 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-13 00:43:57,842 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-13 00:43:57,843 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-13 00:43:57,848 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-13 00:43:57,855 [ scc.git] DEBUG Already up to date. 2024-07-13 00:43:57,855 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-07-13 00:43:58,259 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-07-13 00:43:58,259 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-07-13 00:43:58,264 [ scc.git] DEBUG ## Unique users: [] 2024-07-13 00:43:58,265 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:43:58,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:58,272 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-07-13 00:43:58,278 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:58,284 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-07-13 00:43:58,293 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-13 00:43:58,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:43:58,466 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-13 00:43:58,506 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:43:58,507 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:43:58,512 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:43:58,552 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-13 00:43:58,560 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a4a85bee0> has no local changes 2024-07-13 00:43:58,560 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#121 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/)' 2024-07-13 00:43:58,569 [ scc.git] DEBUG [detached HEAD abdd380] merge master -Dorg -Ssuccess-only 2024-07-13 00:43:58,570 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:43:58,570 [ scc.repo] DEBUG ## PRs found: 2024-07-13 00:43:59,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-07-13 00:43:59,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-07-13 00:43:59,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-07-13 00:44:00,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-07-13 00:44:01,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-07-13 00:44:01,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:44:01,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-07-13 00:44:02,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:44:02,416 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-07-13 00:44:02,416 [ scc.repo] DEBUG ## Branches found: 2024-07-13 00:44:02,416 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-07-13 00:44:02,416 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:02,416 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:02,424 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-13 00:44:02,430 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-13 00:44:02,430 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-13 00:44:02,438 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-13 00:44:02,444 [ scc.git] DEBUG Already up to date. 2024-07-13 00:44:02,444 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-07-13 00:44:02,959 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-07-13 00:44:02,960 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-07-13 00:44:02,965 [ scc.git] DEBUG ## Unique users: [] 2024-07-13 00:44:02,966 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:02,966 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:02,971 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-07-13 00:44:02,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:02,985 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-07-13 00:44:02,996 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-07-13 00:44:02,997 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-13 00:44:03,000 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-07-13 00:44:03,000 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-07-13 00:44:03,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:03,162 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-13 00:44:03,208 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:03,209 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:03,215 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:44:03,261 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-13 00:44:03,270 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a28790b80> has no local changes 2024-07-13 00:44:03,270 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#121 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/)' 2024-07-13 00:44:03,280 [ scc.git] DEBUG [detached HEAD ba086bc] merge master -Dorg -Ssuccess-only 2024-07-13 00:44:03,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:03,281 [ scc.repo] DEBUG ## PRs found: 2024-07-13 00:44:03,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-07-13 00:44:04,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-07-13 00:44:04,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-07-13 00:44:05,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-07-13 00:44:05,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:44:06,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-07-13 00:44:06,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:44:06,970 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-07-13 00:44:06,970 [ scc.repo] DEBUG ## Branches found: 2024-07-13 00:44:06,970 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-07-13 00:44:06,970 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:06,970 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:06,977 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-13 00:44:06,984 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-13 00:44:06,984 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-13 00:44:06,991 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-13 00:44:06,997 [ scc.git] DEBUG Already up to date. 2024-07-13 00:44:06,998 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-07-13 00:44:07,406 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-07-13 00:44:07,406 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-07-13 00:44:07,413 [ scc.git] DEBUG ## Unique users: [] 2024-07-13 00:44:07,413 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:07,413 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:07,423 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-07-13 00:44:07,434 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:07,445 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-07-13 00:44:07,509 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-07-13 00:44:07,509 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-07-13 00:44:07,509 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-07-13 00:44:07,509 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-07-13 00:44:07,509 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-07-13 00:44:07,509 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-07-13 00:44:07,510 [ scc.git] DEBUG Auto-merging setup.py 2024-07-13 00:44:07,510 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-07-13 00:44:07,510 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-13 00:44:07,510 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-13 00:44:07,519 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-07-13 00:44:07,530 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-07-13 00:44:07,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:07,695 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-07-13 00:44:07,707 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-07-13 00:44:07,718 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#121](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - setup.py - omero_signup/urls.py - omero_signup/signup_settings.py --conflicts 2024-07-13 00:44:07,728 [ scc.config] DEBUG Found github.token 2024-07-13 00:44:07,728 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-07-13 00:44:07,729 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-13 00:44:07,784 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:07,784 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:07,793 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:44:07,852 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-13 00:44:07,862 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a2b7d2f10> has no local changes 2024-07-13 00:44:07,863 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#121 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/)' 2024-07-13 00:44:07,876 [ scc.git] DEBUG [detached HEAD 76f8ea6] merge master -Dorg -Ssuccess-only 2024-07-13 00:44:07,876 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:07,876 [ scc.repo] DEBUG ## PRs found: 2024-07-13 00:44:08,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-07-13 00:44:08,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-07-13 00:44:09,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-07-13 00:44:09,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-07-13 00:44:10,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:44:10,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-07-13 00:44:10,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:44:10,987 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-07-13 00:44:10,987 [ scc.repo] DEBUG ## Branches found: 2024-07-13 00:44:10,987 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-07-13 00:44:10,988 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:10,988 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:10,998 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-13 00:44:11,007 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-13 00:44:11,007 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-13 00:44:11,015 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-13 00:44:11,024 [ scc.git] DEBUG Already up to date. 2024-07-13 00:44:11,024 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-07-13 00:44:11,501 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-07-13 00:44:11,502 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-07-13 00:44:11,509 [ scc.git] DEBUG ## Unique users: [] 2024-07-13 00:44:11,509 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:11,509 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:11,521 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-07-13 00:44:11,531 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:11,541 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-07-13 00:44:11,564 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-13 00:44:11,569 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-07-13 00:44:11,569 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-07-13 00:44:11,569 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-07-13 00:44:11,569 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-07-13 00:44:11,570 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-07-13 00:44:11,570 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-07-13 00:44:11,570 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-07-13 00:44:11,570 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-07-13 00:44:11,570 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-07-13 00:44:11,570 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-07-13 00:44:11,573 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-07-13 00:44:11,574 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-07-13 00:44:11,574 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-07-13 00:44:11,574 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-07-13 00:44:11,574 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-07-13 00:44:11,574 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-07-13 00:44:11,574 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-07-13 00:44:11,574 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-07-13 00:44:11,574 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-07-13 00:44:11,574 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-07-13 00:44:11,574 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-07-13 00:44:11,574 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-07-13 00:44:11,574 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-07-13 00:44:11,574 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-07-13 00:44:11,574 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-07-13 00:44:11,574 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-07-13 00:44:11,574 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-07-13 00:44:11,574 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-07-13 00:44:11,574 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-07-13 00:44:11,574 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-07-13 00:44:11,574 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-07-13 00:44:11,574 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-07-13 00:44:11,574 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-07-13 00:44:11,575 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-07-13 00:44:11,575 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-07-13 00:44:11,575 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-07-13 00:44:11,575 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-07-13 00:44:11,575 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-07-13 00:44:11,575 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-07-13 00:44:11,575 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-07-13 00:44:11,575 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-07-13 00:44:11,575 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-07-13 00:44:11,575 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-07-13 00:44:11,575 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-07-13 00:44:11,575 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-07-13 00:44:11,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:11,735 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-13 00:44:11,777 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:11,777 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:11,783 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:44:11,825 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-13 00:44:11,833 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a28792700> has no local changes 2024-07-13 00:44:11,833 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#121 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/)' 2024-07-13 00:44:11,844 [ scc.git] DEBUG [detached HEAD 31448bd] merge master -Dorg -Ssuccess-only 2024-07-13 00:44:11,844 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:11,844 [ scc.repo] DEBUG ## PRs found: 2024-07-13 00:44:12,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-07-13 00:44:12,190 [ scc.repo] DEBUG ## Branches found: 2024-07-13 00:44:12,190 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-07-13 00:44:12,190 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:12,190 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:12,198 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-13 00:44:12,205 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-13 00:44:12,205 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-13 00:44:12,213 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-13 00:44:12,220 [ scc.git] DEBUG Already up to date. 2024-07-13 00:44:12,220 [ scc.git] DEBUG ## Unique users: [] 2024-07-13 00:44:12,220 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:12,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:12,227 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-13 00:44:12,282 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:12,282 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:12,289 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:44:12,329 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-13 00:44:12,336 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a2879de50> has no local changes 2024-07-13 00:44:12,336 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#121 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/)' 2024-07-13 00:44:12,345 [ scc.git] DEBUG [detached HEAD e212a4d] merge master -Dorg -Ssuccess-only 2024-07-13 00:44:12,345 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:12,345 [ scc.repo] DEBUG ## PRs found: 2024-07-13 00:44:12,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-07-13 00:44:12,624 [ scc.repo] DEBUG ## Branches found: 2024-07-13 00:44:12,624 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-07-13 00:44:12,624 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:12,625 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:12,632 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-13 00:44:12,637 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-13 00:44:12,638 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-13 00:44:12,644 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-13 00:44:12,651 [ scc.git] DEBUG Already up to date. 2024-07-13 00:44:12,651 [ scc.git] DEBUG ## Unique users: [] 2024-07-13 00:44:12,651 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:12,651 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:12,657 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-13 00:44:12,704 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:12,704 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:12,710 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:44:12,750 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-13 00:44:12,757 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a287584f0> has no local changes 2024-07-13 00:44:12,757 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#121 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/)' 2024-07-13 00:44:12,766 [ scc.git] DEBUG [detached HEAD 43cb828] merge master -Dorg -Ssuccess-only 2024-07-13 00:44:12,767 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:12,767 [ scc.git] INFO Overriding base-branch from master to main 2024-07-13 00:44:12,768 [ scc.repo] DEBUG ## PRs found: 2024-07-13 00:44:13,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-07-13 00:44:13,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-07-13 00:44:14,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-07-13 00:44:14,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-07-13 00:44:15,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-07-13 00:44:15,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:44:16,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-13 00:44:16,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-07-13 00:44:17,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:44:17,034 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-07-13 00:44:17,034 [ scc.repo] DEBUG ## Branches found: 2024-07-13 00:44:17,034 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-07-13 00:44:17,034 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:17,034 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:17,041 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-07-13 00:44:17,047 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-13 00:44:17,047 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-07-13 00:44:17,054 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-07-13 00:44:17,061 [ scc.git] DEBUG Already up to date. 2024-07-13 00:44:17,062 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-07-13 00:44:17,434 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-07-13 00:44:17,435 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-07-13 00:44:17,439 [ scc.git] DEBUG ## Unique users: [] 2024-07-13 00:44:17,440 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:17,440 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:17,447 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-07-13 00:44:17,453 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:17,459 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-07-13 00:44:17,527 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-07-13 00:44:17,527 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-07-13 00:44:17,527 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-13 00:44:17,528 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-13 00:44:17,534 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-07-13 00:44:17,542 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-07-13 00:44:17,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:17,719 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-07-13 00:44:17,725 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-07-13 00:44:17,732 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#121](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-07-13 00:44:17,737 [ scc.config] DEBUG Found github.token 2024-07-13 00:44:17,737 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-07-13 00:44:17,738 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-13 00:44:17,793 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:17,793 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:17,803 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:44:17,860 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-13 00:44:17,869 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a287094f0> has no local changes 2024-07-13 00:44:17,869 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#121 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/)' 2024-07-13 00:44:17,881 [ scc.git] DEBUG [detached HEAD 418a6a0] merge master -Dorg -Ssuccess-only 2024-07-13 00:44:17,881 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:17,882 [ scc.repo] DEBUG ## PRs found: 2024-07-13 00:44:18,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-07-13 00:44:18,202 [ scc.repo] DEBUG ## Branches found: 2024-07-13 00:44:18,202 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-07-13 00:44:18,202 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:18,202 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:18,210 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-13 00:44:18,215 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-13 00:44:18,216 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-13 00:44:18,222 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-13 00:44:18,229 [ scc.git] DEBUG Already up to date. 2024-07-13 00:44:18,229 [ scc.git] DEBUG ## Unique users: [] 2024-07-13 00:44:18,229 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:18,229 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:18,235 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-13 00:44:18,279 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:18,280 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:18,286 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:44:18,331 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-13 00:44:18,342 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a28741400> has no local changes 2024-07-13 00:44:18,342 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#121 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/)' 2024-07-13 00:44:18,354 [ scc.git] DEBUG [detached HEAD 92188a7] merge master -Dorg -Ssuccess-only 2024-07-13 00:44:18,354 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:18,355 [ scc.repo] DEBUG ## PRs found: 2024-07-13 00:44:18,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-07-13 00:44:18,643 [ scc.repo] DEBUG ## Branches found: 2024-07-13 00:44:18,643 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-07-13 00:44:18,643 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:18,643 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:18,651 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-13 00:44:18,657 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-13 00:44:18,657 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-13 00:44:18,663 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-13 00:44:18,670 [ scc.git] DEBUG Already up to date. 2024-07-13 00:44:18,670 [ scc.git] DEBUG ## Unique users: [] 2024-07-13 00:44:18,670 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:18,670 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:18,676 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-13 00:44:18,716 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:18,716 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:18,723 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:44:18,766 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-13 00:44:18,774 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a28732700> has no local changes 2024-07-13 00:44:18,774 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#121 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/)' 2024-07-13 00:44:18,786 [ scc.git] DEBUG [detached HEAD 516178b] merge master -Dorg -Ssuccess-only 2024-07-13 00:44:18,787 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:18,788 [ scc.repo] DEBUG ## PRs found: 2024-07-13 00:44:19,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-07-13 00:44:19,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-07-13 00:44:20,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-07-13 00:44:20,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-07-13 00:44:21,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:44:21,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-07-13 00:44:22,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:44:22,114 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-07-13 00:44:22,114 [ scc.repo] DEBUG ## Branches found: 2024-07-13 00:44:22,114 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-07-13 00:44:22,114 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:22,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:22,121 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-13 00:44:22,128 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-13 00:44:22,128 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-13 00:44:22,136 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-13 00:44:22,144 [ scc.git] DEBUG Already up to date. 2024-07-13 00:44:22,144 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-07-13 00:44:22,565 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-07-13 00:44:22,566 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-07-13 00:44:22,571 [ scc.git] DEBUG ## Unique users: [] 2024-07-13 00:44:22,571 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:22,571 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:22,578 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-07-13 00:44:22,585 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:22,591 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-07-13 00:44:22,635 [ scc.git] DEBUG Auto-merging Dockerfile 2024-07-13 00:44:22,635 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-07-13 00:44:22,635 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-13 00:44:22,636 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-13 00:44:22,643 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-07-13 00:44:22,651 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-07-13 00:44:22,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:22,826 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-07-13 00:44:22,835 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-07-13 00:44:22,842 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#121](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-07-13 00:44:22,849 [ scc.config] DEBUG Found github.token 2024-07-13 00:44:22,850 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-07-13 00:44:22,850 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-13 00:44:22,893 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:22,893 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:22,899 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:44:22,942 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-13 00:44:22,950 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a286c4df0> has no local changes 2024-07-13 00:44:22,950 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#121 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/)' 2024-07-13 00:44:22,960 [ scc.git] DEBUG [detached HEAD 212c641] merge master -Dorg -Ssuccess-only 2024-07-13 00:44:22,960 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:22,960 [ scc.git] INFO Overriding base-branch from master to develop 2024-07-13 00:44:22,960 [ scc.repo] DEBUG ## PRs found: 2024-07-13 00:44:23,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-07-13 00:44:23,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-07-13 00:44:24,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-07-13 00:44:24,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-07-13 00:44:25,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-07-13 00:44:25,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-07-13 00:44:26,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-07-13 00:44:26,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-07-13 00:44:27,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-13 00:44:27,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-07-13 00:44:28,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-07-13 00:44:28,183 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-07-13 00:44:28,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-07-13 00:44:29,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-07-13 00:44:29,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-07-13 00:44:30,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-07-13 00:44:30,214 [ scc.repo] DEBUG ## Branches found: 2024-07-13 00:44:30,214 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-07-13 00:44:30,214 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:30,215 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:30,222 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-07-13 00:44:30,228 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-13 00:44:30,229 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-07-13 00:44:30,235 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-07-13 00:44:30,242 [ scc.git] DEBUG Already up to date. 2024-07-13 00:44:30,242 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-07-13 00:44:30,619 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-07-13 00:44:30,620 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-07-13 00:44:30,626 [ scc.git] DEBUG ## Unique users: [] 2024-07-13 00:44:30,627 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:30,627 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:30,636 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-13 00:44:30,646 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:30,653 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-13 00:44:30,721 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-07-13 00:44:30,721 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-07-13 00:44:30,721 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-13 00:44:30,722 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-13 00:44:30,730 [ scc.git] DEBUG Calling 'git reset --hard c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-07-13 00:44:30,738 [ scc.git] DEBUG HEAD is now at c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-07-13 00:44:30,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:30,923 [ scc.git] DEBUG Calling 'git merge-base c20d2734b711c659cecea83db6e2ebd7b7013636 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-13 00:44:30,934 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-07-13 00:44:30,945 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#121](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-07-13 00:44:30,952 [ scc.config] DEBUG Found github.token 2024-07-13 00:44:30,953 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-07-13 00:44:30,953 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-13 00:44:30,998 [ scc.git] DEBUG Get sha1 of %s 2024-07-13 00:44:30,998 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-13 00:44:31,005 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:44:31,068 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-13 00:44:31,078 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a28735ee0> has no local changes 2024-07-13 00:44:31,079 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#121 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/)' 2024-07-13 00:44:31,089 [ scc.git] DEBUG [detached HEAD dbddd15] merge master -Dorg -Ssuccess-only 2024-07-13 00:44:31,090 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:31,090 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-13 00:44:31,181 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-07-13 00:44:31,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:31,365 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-07-13 00:44:31,374 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-07-13 00:44:31,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:31,860 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-07-13 00:44:31,866 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-07-13 00:44:32,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:32,271 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-07-13 00:44:32,276 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-07-13 00:44:32,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:32,680 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-07-13 00:44:33,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:33,085 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-07-13 00:44:33,091 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-07-13 00:44:33,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:33,491 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-07-13 00:44:33,498 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-07-13 00:44:33,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:33,895 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-07-13 00:44:33,901 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-07-13 00:44:34,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:34,312 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-07-13 00:44:34,318 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-07-13 00:44:34,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:34,722 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-07-13 00:44:34,726 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-07-13 00:44:35,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:35,142 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-07-13 00:44:35,148 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-07-13 00:44:35,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:35,602 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-07-13 00:44:35,612 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-07-13 00:44:35,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:35,982 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-07-13 00:44:35,987 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-07-13 00:44:36,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:36,398 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-07-13 00:44:36,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:36,807 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-07-13 00:44:37,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:37,243 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-07-13 00:44:37,249 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-07-13 00:44:37,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:37,662 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-07-13 00:44:38,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:38,067 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-07-13 00:44:38,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:38,484 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-07-13 00:44:38,490 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-07-13 00:44:38,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:38,891 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-07-13 00:44:38,895 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-07-13 00:44:39,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:39,310 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-07-13 00:44:39,314 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-07-13 00:44:39,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:39,721 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-07-13 00:44:39,726 [ scc.config] DEBUG Found submodule.scripts.url 2024-07-13 00:44:40,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-13 00:44:40,137 [ scc.config] DEBUG Found submodule.scripts.branch 2024-07-13 00:44:40,137 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-13 00:44:40,220 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a4b949d60> has local changes 2024-07-13 00:44:40,220 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Repository: ome/omero-cli-zarr Excluded PRs: - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 577 Rdornier 'Fill rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 560 will-moore 'Max projection bytes' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 576 Rdornier 'Color picker - popup update' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#121 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/121/)' 2024-07-13 00:44:40,235 [ scc.git] DEBUG [detached HEAD 0db14be] merge master -Dorg -Ssuccess-only 2024-07-13 00:44:40,236 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-07-13 00:44:40,236 [ scc.merge] INFO Repository: ome/omero-plugins 2024-07-13 00:44:40,236 [ scc.merge] INFO Already up to date. 2024-07-13 00:44:40,236 [ scc.merge] INFO 2024-07-13 00:44:40,236 [ scc.merge] INFO 2024-07-13 00:44:40,236 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-07-13 00:44:40,236 [ scc.merge] INFO Already up to date. 2024-07-13 00:44:40,236 [ scc.merge] INFO 2024-07-13 00:44:40,236 [ scc.merge] INFO 2024-07-13 00:44:40,236 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-07-13 00:44:40,236 [ scc.merge] INFO Excluded PRs: 2024-07-13 00:44:40,236 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-07-13 00:44:40,236 [ scc.merge] INFO Already up to date. 2024-07-13 00:44:40,236 [ scc.merge] INFO 2024-07-13 00:44:40,236 [ scc.merge] INFO Merged PRs: 2024-07-13 00:44:40,236 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-07-13 00:44:40,236 [ scc.merge] INFO 2024-07-13 00:44:40,236 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-07-13 00:44:40,236 [ scc.merge] INFO Excluded PRs: 2024-07-13 00:44:40,236 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-07-13 00:44:40,236 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-07-13 00:44:40,237 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-07-13 00:44:40,237 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-07-13 00:44:40,237 [ scc.merge] INFO Already up to date. 2024-07-13 00:44:40,237 [ scc.merge] INFO 2024-07-13 00:44:40,237 [ scc.merge] INFO Merged PRs: 2024-07-13 00:44:40,237 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-07-13 00:44:40,237 [ scc.merge] INFO - PR 63 sbesson 'Remove python-future dependency' 2024-07-13 00:44:40,237 [ scc.merge] INFO - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-07-13 00:44:40,237 [ scc.merge] INFO 2024-07-13 00:44:40,237 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-07-13 00:44:40,237 [ scc.merge] INFO Excluded PRs: 2024-07-13 00:44:40,237 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-07-13 00:44:40,237 [ scc.merge] INFO Already up to date. 2024-07-13 00:44:40,237 [ scc.merge] INFO 2024-07-13 00:44:40,237 [ scc.merge] INFO Merged PRs: 2024-07-13 00:44:40,237 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-07-13 00:44:40,237 [ scc.merge] INFO 2024-07-13 00:44:40,237 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-13 00:44:40,237 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-07-13 00:44:40,237 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-07-13 00:44:40,237 [ scc.merge] INFO 2024-07-13 00:44:40,237 [ scc.merge] INFO Repository: ome/omero-figure 2024-07-13 00:44:40,237 [ scc.merge] INFO Excluded PRs: 2024-07-13 00:44:40,237 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' (user: Rdornier) 2024-07-13 00:44:40,237 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-07-13 00:44:40,237 [ scc.merge] INFO Already up to date. 2024-07-13 00:44:40,237 [ scc.merge] INFO 2024-07-13 00:44:40,237 [ scc.merge] INFO Merged PRs: 2024-07-13 00:44:40,237 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' 2024-07-13 00:44:40,237 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-07-13 00:44:40,237 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes' 2024-07-13 00:44:40,237 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-07-13 00:44:40,237 [ scc.merge] INFO - PR 576 Rdornier 'Color picker - popup update' 2024-07-13 00:44:40,237 [ scc.merge] INFO 2024-07-13 00:44:40,237 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-07-13 00:44:40,238 [ scc.merge] INFO Already up to date. 2024-07-13 00:44:40,238 [ scc.merge] INFO 2024-07-13 00:44:40,238 [ scc.merge] INFO Merged PRs: 2024-07-13 00:44:40,238 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-07-13 00:44:40,238 [ scc.merge] INFO 2024-07-13 00:44:40,238 [ scc.merge] INFO Repository: ome/omero-gallery 2024-07-13 00:44:40,238 [ scc.merge] INFO Already up to date. 2024-07-13 00:44:40,238 [ scc.merge] INFO 2024-07-13 00:44:40,238 [ scc.merge] INFO Merged PRs: 2024-07-13 00:44:40,238 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-07-13 00:44:40,238 [ scc.merge] INFO 2024-07-13 00:44:40,238 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-07-13 00:44:40,238 [ scc.merge] INFO Excluded PRs: 2024-07-13 00:44:40,238 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-07-13 00:44:40,238 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-07-13 00:44:40,238 [ scc.merge] INFO Already up to date. 2024-07-13 00:44:40,238 [ scc.merge] INFO 2024-07-13 00:44:40,238 [ scc.merge] INFO Merged PRs: 2024-07-13 00:44:40,238 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-07-13 00:44:40,238 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-07-13 00:44:40,238 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-07-13 00:44:40,238 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-07-13 00:44:40,238 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-07-13 00:44:40,238 [ scc.merge] INFO 2024-07-13 00:44:40,238 [ scc.merge] INFO Repository: ome/omero-mapr 2024-07-13 00:44:40,238 [ scc.merge] INFO Excluded PRs: 2024-07-13 00:44:40,238 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-07-13 00:44:40,238 [ scc.merge] INFO Already up to date. 2024-07-13 00:44:40,238 [ scc.merge] INFO 2024-07-13 00:44:40,238 [ scc.merge] INFO Merged PRs: 2024-07-13 00:44:40,238 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-07-13 00:44:40,238 [ scc.merge] INFO 2024-07-13 00:44:40,238 [ scc.merge] INFO Repository: ome/omero-metadata 2024-07-13 00:44:40,238 [ scc.merge] INFO Already up to date. 2024-07-13 00:44:40,238 [ scc.merge] INFO 2024-07-13 00:44:40,238 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-13 00:44:40,239 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-07-13 00:44:40,239 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-07-13 00:44:40,239 [ scc.merge] INFO 2024-07-13 00:44:40,239 [ scc.merge] INFO Repository: ome/omero-parade 2024-07-13 00:44:40,239 [ scc.merge] INFO Excluded PRs: 2024-07-13 00:44:40,239 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-07-13 00:44:40,239 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-07-13 00:44:40,239 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-07-13 00:44:40,239 [ scc.merge] INFO Already up to date. 2024-07-13 00:44:40,239 [ scc.merge] INFO 2024-07-13 00:44:40,239 [ scc.merge] INFO Merged PRs: 2024-07-13 00:44:40,239 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-07-13 00:44:40,239 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-07-13 00:44:40,239 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-07-13 00:44:40,239 [ scc.merge] INFO 2024-07-13 00:44:40,239 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-07-13 00:44:40,239 [ scc.merge] INFO Already up to date. 2024-07-13 00:44:40,239 [ scc.merge] INFO 2024-07-13 00:44:40,239 [ scc.merge] INFO Merged PRs: 2024-07-13 00:44:40,239 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-07-13 00:44:40,239 [ scc.merge] INFO 2024-07-13 00:44:40,239 [ scc.merge] INFO Repository: ome/omero-rois 2024-07-13 00:44:40,239 [ scc.merge] INFO Excluded PRs: 2024-07-13 00:44:40,239 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-07-13 00:44:40,239 [ scc.merge] INFO Already up to date. 2024-07-13 00:44:40,239 [ scc.merge] INFO 2024-07-13 00:44:40,239 [ scc.merge] INFO Merged PRs: 2024-07-13 00:44:40,239 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-07-13 00:44:40,239 [ scc.merge] INFO 2024-07-13 00:44:40,240 [ scc.merge] INFO Repository: ome/omero-signup 2024-07-13 00:44:40,240 [ scc.merge] INFO Already up to date. 2024-07-13 00:44:40,240 [ scc.merge] INFO 2024-07-13 00:44:40,240 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-13 00:44:40,240 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-07-13 00:44:40,240 [ scc.merge] INFO 2024-07-13 00:44:40,240 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-07-13 00:44:40,240 [ scc.merge] INFO Already up to date. 2024-07-13 00:44:40,240 [ scc.merge] INFO 2024-07-13 00:44:40,240 [ scc.merge] INFO Merged PRs: 2024-07-13 00:44:40,240 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-07-13 00:44:40,240 [ scc.merge] INFO 2024-07-13 00:44:40,240 [ scc.merge] INFO Repository: ome/omero-upload 2024-07-13 00:44:40,240 [ scc.merge] INFO Already up to date. 2024-07-13 00:44:40,240 [ scc.merge] INFO 2024-07-13 00:44:40,240 [ scc.merge] INFO 2024-07-13 00:44:40,240 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-07-13 00:44:40,240 [ scc.merge] INFO Already up to date. 2024-07-13 00:44:40,240 [ scc.merge] INFO 2024-07-13 00:44:40,240 [ scc.merge] INFO 2024-07-13 00:44:40,240 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-07-13 00:44:40,240 [ scc.merge] INFO Excluded PRs: 2024-07-13 00:44:40,240 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-07-13 00:44:40,240 [ scc.merge] INFO Already up to date. 2024-07-13 00:44:40,240 [ scc.merge] INFO 2024-07-13 00:44:40,240 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-13 00:44:40,240 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-07-13 00:44:40,240 [ scc.merge] INFO 2024-07-13 00:44:40,240 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-07-13 00:44:40,240 [ scc.merge] INFO Already up to date. 2024-07-13 00:44:40,240 [ scc.merge] INFO 2024-07-13 00:44:40,241 [ scc.merge] INFO 2024-07-13 00:44:40,241 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-07-13 00:44:40,241 [ scc.merge] INFO Already up to date. 2024-07-13 00:44:40,241 [ scc.merge] INFO 2024-07-13 00:44:40,241 [ scc.merge] INFO 2024-07-13 00:44:40,241 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-07-13 00:44:40,241 [ scc.merge] INFO Already up to date. 2024-07-13 00:44:40,241 [ scc.merge] INFO 2024-07-13 00:44:40,241 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-13 00:44:40,241 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-07-13 00:44:40,241 [ scc.merge] INFO 2024-07-13 00:44:40,241 [ scc.merge] INFO Repository: ome/scripts 2024-07-13 00:44:40,241 [ scc.merge] INFO Excluded PRs: 2024-07-13 00:44:40,241 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-07-13 00:44:40,241 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-07-13 00:44:40,241 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-07-13 00:44:40,241 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-07-13 00:44:40,241 [ scc.merge] INFO Already up to date. 2024-07-13 00:44:40,241 [ scc.merge] INFO 2024-07-13 00:44:40,241 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-13 00:44:40,241 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-07-13 00:44:40,241 [ scc.merge] INFO 2024-07-13 00:44:40,241 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-07-13 00:44:40,241 [ scc.git] DEBUG Calling 'git remote' 2024-07-13 00:44:40,247 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-07-13 00:44:40,247 [ scc.git] DEBUG Calling 'git remote' 2024-07-13 00:44:40,252 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:40,252 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-07-13 00:44:40,252 [ scc.git] DEBUG Calling 'git remote' 2024-07-13 00:44:40,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:40,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-07-13 00:44:40,257 [ scc.git] DEBUG Calling 'git remote' 2024-07-13 00:44:40,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:40,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-07-13 00:44:40,262 [ scc.git] DEBUG Calling 'git remote' 2024-07-13 00:44:40,270 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:40,270 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-07-13 00:44:40,270 [ scc.git] DEBUG Calling 'git remote' 2024-07-13 00:44:40,276 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:40,276 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-07-13 00:44:40,277 [ scc.git] DEBUG Calling 'git remote' 2024-07-13 00:44:40,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:40,282 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-07-13 00:44:40,282 [ scc.git] DEBUG Calling 'git remote' 2024-07-13 00:44:40,286 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:40,286 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-07-13 00:44:40,286 [ scc.git] DEBUG Calling 'git remote' 2024-07-13 00:44:40,291 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:40,291 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-07-13 00:44:40,291 [ scc.git] DEBUG Calling 'git remote' 2024-07-13 00:44:40,295 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:40,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-07-13 00:44:40,296 [ scc.git] DEBUG Calling 'git remote' 2024-07-13 00:44:40,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:40,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-07-13 00:44:40,301 [ scc.git] DEBUG Calling 'git remote' 2024-07-13 00:44:40,305 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:40,305 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-07-13 00:44:40,305 [ scc.git] DEBUG Calling 'git remote' 2024-07-13 00:44:40,310 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:40,310 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-07-13 00:44:40,310 [ scc.git] DEBUG Calling 'git remote' 2024-07-13 00:44:40,315 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:40,315 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-07-13 00:44:40,315 [ scc.git] DEBUG Calling 'git remote' 2024-07-13 00:44:40,319 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:40,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-07-13 00:44:40,320 [ scc.git] DEBUG Calling 'git remote' 2024-07-13 00:44:40,324 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:40,324 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-07-13 00:44:40,324 [ scc.git] DEBUG Calling 'git remote' 2024-07-13 00:44:40,329 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:40,329 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-07-13 00:44:40,329 [ scc.git] DEBUG Calling 'git remote' 2024-07-13 00:44:40,334 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:40,334 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-07-13 00:44:40,334 [ scc.git] DEBUG Calling 'git remote' 2024-07-13 00:44:40,338 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:40,339 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-07-13 00:44:40,339 [ scc.git] DEBUG Calling 'git remote' 2024-07-13 00:44:40,343 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:40,344 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-07-13 00:44:40,344 [ scc.git] DEBUG Calling 'git remote' 2024-07-13 00:44:40,348 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:40,348 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-07-13 00:44:40,348 [ scc.git] DEBUG Calling 'git remote' 2024-07-13 00:44:40,353 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-13 00:44:40,353 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-07-13 00:44:40,353 [ scc.git] DEBUG Calling 'git remote' 2024-07-13 00:44:40,358 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.1 to 5.9.2-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 61e2faa] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from fefe87cf nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from c20d273 nothing to commit, working tree clean [detached HEAD f46340f] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-07-13 00:45:26,607 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-07-13 00:45:35,695 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-07-13 00:45:38,047 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-07-13 00:45:42,676 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-07-13 00:46:36,572 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS