![[Jenkins]](/jenkins/static/d3f93f1f/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 247 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Commit message: "Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399" > git rev-list --no-walk b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 213 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.4.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (34 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.4.0-py3-none-any.whl (362 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (144 kB) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.4.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.4.0 cryptography-43.0.1 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-10-14 00:47:55,141 [ scc.config] DEBUG Found github.token 2024-10-14 00:47:55,143 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-10-14 00:47:55,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:47:55,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:47:56,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-10-14 00:47:56,090 [ scc.gh] DEBUG 4240 remaining from 5000 (Reset at 01:10 2024-10-14 00:47:56,091 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-14 00:47:56,096 [ scc.git] DEBUG Check current status 2024-10-14 00:47:56,096 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-14 00:47:56,099 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-14 00:47:56,099 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-14 00:47:56,143 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-14 00:47:56,145 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-14 00:47:56,148 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-14 00:47:56,151 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-14 00:47:56,156 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-10-14 00:47:56,158 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-14 00:47:56,161 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-14 00:47:56,164 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-14 00:47:56,167 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-14 00:47:56,169 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-14 00:47:56,172 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-14 00:47:56,174 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-14 00:47:56,177 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-14 00:47:56,180 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-14 00:47:56,183 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-14 00:47:56,185 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-14 00:47:56,188 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-14 00:47:56,190 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-14 00:47:56,192 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-14 00:47:56,195 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-14 00:47:56,197 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-14 00:47:56,201 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-14 00:47:56,206 [ scc.config] DEBUG Found remote.origin.url 2024-10-14 00:47:56,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-10-14 00:47:57,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-14 00:47:57,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-14 00:47:57,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-14 00:47:58,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-14 00:47:58,279 [ scc.git] DEBUG Resetting... 2024-10-14 00:47:58,279 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-10-14 00:47:58,290 [ scc.git] DEBUG HEAD is now at b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-14 00:47:58,290 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-10-14 00:47:58,392 [ scc.git] DEBUG Check current status 2024-10-14 00:47:58,393 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-14 00:47:58,397 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-14 00:47:58,397 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-14 00:47:58,442 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-14 00:47:58,444 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-14 00:47:58,446 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-14 00:47:58,449 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-14 00:47:58,453 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-10-14 00:47:58,456 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-14 00:47:58,458 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-14 00:47:58,461 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-14 00:47:58,464 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-14 00:47:58,466 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-14 00:47:58,469 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-14 00:47:58,472 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-14 00:47:58,475 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-14 00:47:58,478 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-14 00:47:58,481 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-14 00:47:58,484 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-14 00:47:58,486 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-14 00:47:58,488 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-14 00:47:58,491 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-14 00:47:58,493 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-14 00:47:58,497 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-14 00:47:58,500 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-14 00:47:58,501 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-10-14 00:47:58,501 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-10-14 00:47:58,501 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-10-14 00:47:58,501 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-10-14 00:47:58,501 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-10-14 00:47:58,501 [ scc.repo] DEBUG ## PRs found: 2024-10-14 00:47:58,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-10-14 00:47:59,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/393 HTTP/1.1" 200 None 2024-10-14 00:47:59,179 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-14 00:47:59,179 [ scc.repo] DEBUG - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' 2024-10-14 00:47:59,179 [ scc.repo] DEBUG ## Branches found: 2024-10-14 00:47:59,179 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:47:59,179 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:47:59,185 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-14 00:47:59,188 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-14 00:47:59,188 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-14 00:47:59,193 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-14 00:47:59,198 [ scc.git] DEBUG Already up to date. 2024-10-14 00:47:59,198 [ scc.git] DEBUG Calling 'git fetch origin pull/393/head' 2024-10-14 00:47:59,511 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-10-14 00:47:59,511 [ scc.git] DEBUG * branch refs/pull/393/head -> FETCH_HEAD 2024-10-14 00:47:59,517 [ scc.git] DEBUG ## Unique users: [] 2024-10-14 00:47:59,517 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:47:59,517 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:47:59,521 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d' 2024-10-14 00:47:59,574 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:47:59,579 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 393 (Bump omero-figure from `5f62399` to `1c0e5f9`) 8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d' 2024-10-14 00:47:59,594 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:47:59,597 [ scc.git] DEBUG omero-figure | 2 +- 2024-10-14 00:47:59,597 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-10-14 00:47:59,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:47:59,732 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-14 00:47:59,864 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1' 2024-10-14 00:47:59,865 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:47:59,865 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:47:59,869 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-14 00:48:01,861 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fba441678b0> has no local changes 2024-10-14 00:48:01,862 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' Generated by OMERO-plugins-push#211 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/)' 2024-10-14 00:48:01,973 [ scc.git] DEBUG [detached HEAD e5dc0bc] merge master -Dorg -Snone 2024-10-14 00:48:01,973 [ scc.merge] INFO Repository: ome/omero-plugins 2024-10-14 00:48:01,974 [ scc.merge] INFO Already up to date. 2024-10-14 00:48:01,974 [ scc.merge] INFO 2024-10-14 00:48:01,974 [ scc.merge] INFO Merged PRs: 2024-10-14 00:48:01,974 [ scc.merge] INFO - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' 2024-10-14 00:48:01,974 [ scc.merge] INFO 2024-10-14 00:48:01,974 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-10-14 00:48:01,974 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-10-14 00:48:10,590 [ scc.config] DEBUG Found github.token 2024-10-14 00:48:10,592 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-10-14 00:48:10,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:48:11,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:48:11,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-10-14 00:48:11,526 [ scc.gh] DEBUG 4188 remaining from 5000 (Reset at 01:10 2024-10-14 00:48:11,527 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-14 00:48:11,531 [ scc.git] DEBUG Check current status 2024-10-14 00:48:11,532 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-14 00:48:11,535 [ scc.git] DEBUG e5dc0bc merge master -Dorg -Snone 2024-10-14 00:48:11,535 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-14 00:48:11,584 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-14 00:48:11,586 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-14 00:48:11,589 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-14 00:48:11,592 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-14 00:48:12,854 [ scc.git] DEBUG 1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1 omero-figure (v7.1.0-65-g1c0e5f95) 2024-10-14 00:48:12,857 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-14 00:48:12,859 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-14 00:48:12,863 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-14 00:48:12,865 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-14 00:48:12,868 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-14 00:48:12,870 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-14 00:48:12,873 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-14 00:48:12,876 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-14 00:48:12,878 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-14 00:48:12,881 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-14 00:48:12,884 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-14 00:48:12,889 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-14 00:48:12,893 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-14 00:48:12,897 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-14 00:48:12,899 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-14 00:48:12,903 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-14 00:48:12,907 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-14 00:48:12,915 [ scc.config] DEBUG Found remote.origin.url 2024-10-14 00:48:12,915 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-10-14 00:48:12,919 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-10-14 00:48:13,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-10-14 00:48:13,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-14 00:48:14,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-14 00:48:14,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-14 00:48:14,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-14 00:48:14,832 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:48:14,900 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-14 00:48:14,901 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-14 00:48:14,904 [ scc.git] DEBUG Check current status 2024-10-14 00:48:14,904 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-14 00:48:14,908 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-10-14 00:48:14,908 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-14 00:48:14,947 [ scc.config] DEBUG Found remote.origin.url 2024-10-14 00:48:15,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-10-14 00:48:15,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-14 00:48:16,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-14 00:48:16,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-14 00:48:16,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-14 00:48:16,923 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:48:16,970 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:48:16,971 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-14 00:48:16,971 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-14 00:48:16,976 [ scc.git] DEBUG Check current status 2024-10-14 00:48:16,977 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-14 00:48:16,981 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-10-14 00:48:16,981 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-14 00:48:17,025 [ scc.config] DEBUG Found remote.origin.url 2024-10-14 00:48:17,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-10-14 00:48:17,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-14 00:48:18,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-14 00:48:18,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-14 00:48:19,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-14 00:48:19,047 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:48:19,084 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:48:19,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-14 00:48:19,085 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-14 00:48:19,089 [ scc.git] DEBUG Check current status 2024-10-14 00:48:19,089 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-14 00:48:19,093 [ scc.git] DEBUG 173cac0 Bump version: 0.8.1 → 0.8.2.dev0 2024-10-14 00:48:19,094 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-14 00:48:19,133 [ scc.config] DEBUG Found remote.origin.url 2024-10-14 00:48:19,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-10-14 00:48:19,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-14 00:48:20,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-14 00:48:20,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-14 00:48:21,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-14 00:48:21,142 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:48:21,178 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:48:21,179 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-14 00:48:21,179 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-14 00:48:21,183 [ scc.git] DEBUG Check current status 2024-10-14 00:48:21,183 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-14 00:48:21,187 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-14 00:48:21,187 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-14 00:48:21,229 [ scc.config] DEBUG Found remote.origin.url 2024-10-14 00:48:21,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-10-14 00:48:22,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-14 00:48:22,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-14 00:48:22,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-14 00:48:23,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-14 00:48:23,242 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:48:23,282 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:48:23,283 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-14 00:48:23,283 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-14 00:48:23,288 [ scc.git] DEBUG Check current status 2024-10-14 00:48:23,288 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-14 00:48:23,333 [ scc.git] DEBUG 1c0e5f95 Merge pull request #555 from will-moore/points_in_shapeEditor 2024-10-14 00:48:23,333 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-14 00:48:23,375 [ scc.config] DEBUG Found remote.origin.url 2024-10-14 00:48:23,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-10-14 00:48:24,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-14 00:48:24,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-14 00:48:25,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-14 00:48:25,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-14 00:48:25,501 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:48:25,539 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:48:25,540 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-14 00:48:25,540 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-14 00:48:25,545 [ scc.git] DEBUG Check current status 2024-10-14 00:48:25,545 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-14 00:48:25,549 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-10-14 00:48:25,549 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-14 00:48:25,587 [ scc.config] DEBUG Found remote.origin.url 2024-10-14 00:48:25,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-10-14 00:48:26,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-14 00:48:26,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-14 00:48:27,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-14 00:48:27,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-14 00:48:27,650 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:48:27,686 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:48:27,687 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-14 00:48:27,688 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-14 00:48:27,691 [ scc.git] DEBUG Check current status 2024-10-14 00:48:27,692 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-14 00:48:27,695 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-10-14 00:48:27,695 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-14 00:48:27,734 [ scc.config] DEBUG Found remote.origin.url 2024-10-14 00:48:28,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-10-14 00:48:28,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-14 00:48:28,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-14 00:48:29,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-14 00:48:29,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-14 00:48:29,721 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:48:29,758 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:48:29,760 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-14 00:48:29,760 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-14 00:48:29,764 [ scc.git] DEBUG Check current status 2024-10-14 00:48:29,765 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-14 00:48:29,769 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-10-14 00:48:29,769 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-14 00:48:29,812 [ scc.config] DEBUG Found remote.origin.url 2024-10-14 00:48:30,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-10-14 00:48:30,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-14 00:48:31,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-14 00:48:31,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-14 00:48:31,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-14 00:48:31,879 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:48:31,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:48:31,921 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-14 00:48:31,921 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-14 00:48:31,926 [ scc.git] DEBUG Check current status 2024-10-14 00:48:31,926 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-14 00:48:31,931 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-10-14 00:48:31,932 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-14 00:48:31,973 [ scc.config] DEBUG Found remote.origin.url 2024-10-14 00:48:32,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-10-14 00:48:32,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-14 00:48:33,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-14 00:48:33,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-14 00:48:33,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-14 00:48:33,968 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:48:34,005 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:48:34,006 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-14 00:48:34,007 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-14 00:48:34,011 [ scc.git] DEBUG Check current status 2024-10-14 00:48:34,011 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-14 00:48:34,014 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-14 00:48:34,015 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-14 00:48:34,057 [ scc.config] DEBUG Found remote.origin.url 2024-10-14 00:48:34,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-10-14 00:48:34,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-14 00:48:35,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-14 00:48:35,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-14 00:48:36,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-14 00:48:36,093 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:48:36,133 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:48:36,134 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-14 00:48:36,134 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-14 00:48:36,138 [ scc.git] DEBUG Check current status 2024-10-14 00:48:36,138 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-14 00:48:36,142 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-10-14 00:48:36,142 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-14 00:48:36,184 [ scc.config] DEBUG Found remote.origin.url 2024-10-14 00:48:36,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-10-14 00:48:37,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-14 00:48:37,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-14 00:48:37,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-14 00:48:38,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-14 00:48:38,206 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:48:38,243 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:48:38,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-14 00:48:38,244 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-14 00:48:38,248 [ scc.git] DEBUG Check current status 2024-10-14 00:48:38,248 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-14 00:48:38,252 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-10-14 00:48:38,253 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-14 00:48:38,293 [ scc.config] DEBUG Found remote.origin.url 2024-10-14 00:48:38,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-10-14 00:48:39,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-14 00:48:39,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-14 00:48:39,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-14 00:48:40,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-14 00:48:40,303 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:48:40,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:48:40,342 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-14 00:48:40,342 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-14 00:48:40,346 [ scc.git] DEBUG Check current status 2024-10-14 00:48:40,346 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-14 00:48:40,350 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-10-14 00:48:40,351 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-14 00:48:40,390 [ scc.config] DEBUG Found remote.origin.url 2024-10-14 00:48:40,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-10-14 00:48:41,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-14 00:48:41,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-14 00:48:42,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-14 00:48:42,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-14 00:48:42,421 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:48:42,460 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:48:42,462 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-14 00:48:42,462 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-14 00:48:42,467 [ scc.git] DEBUG Check current status 2024-10-14 00:48:42,467 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-14 00:48:42,471 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-10-14 00:48:42,471 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-14 00:48:42,512 [ scc.config] DEBUG Found remote.origin.url 2024-10-14 00:48:42,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-10-14 00:48:43,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-14 00:48:43,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-14 00:48:44,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-14 00:48:44,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-14 00:48:44,501 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:48:44,543 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:48:44,544 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-14 00:48:44,544 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-14 00:48:44,550 [ scc.git] DEBUG Check current status 2024-10-14 00:48:44,550 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-14 00:48:44,555 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-10-14 00:48:44,556 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-14 00:48:44,601 [ scc.config] DEBUG Found remote.origin.url 2024-10-14 00:48:44,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-14 00:48:44,957 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-14 00:48:45,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-10-14 00:48:45,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-14 00:48:46,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-14 00:48:46,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-14 00:48:46,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-14 00:48:46,904 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:48:46,946 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:48:46,947 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-14 00:48:46,947 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-14 00:48:46,951 [ scc.git] DEBUG Check current status 2024-10-14 00:48:46,951 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-14 00:48:46,956 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-10-14 00:48:46,956 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-14 00:48:46,998 [ scc.config] DEBUG Found remote.origin.url 2024-10-14 00:48:47,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-10-14 00:48:47,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-14 00:48:48,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-14 00:48:48,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-14 00:48:49,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-14 00:48:49,020 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:48:49,061 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:48:49,063 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-14 00:48:49,063 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-14 00:48:49,068 [ scc.git] DEBUG Check current status 2024-10-14 00:48:49,068 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-14 00:48:49,072 [ scc.git] DEBUG deab817 update setup-python to v4 2024-10-14 00:48:49,073 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-14 00:48:49,115 [ scc.config] DEBUG Found remote.origin.url 2024-10-14 00:48:49,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-10-14 00:48:49,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-14 00:48:50,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-14 00:48:50,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-14 00:48:51,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-14 00:48:51,125 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:48:51,166 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:48:51,167 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-14 00:48:51,167 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-14 00:48:51,172 [ scc.git] DEBUG Check current status 2024-10-14 00:48:51,172 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-14 00:48:51,177 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-10-14 00:48:51,177 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-14 00:48:51,220 [ scc.config] DEBUG Found remote.origin.url 2024-10-14 00:48:51,220 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-10-14 00:48:51,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-10-14 00:48:52,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-14 00:48:52,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-14 00:48:52,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-14 00:48:53,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-14 00:48:53,208 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:48:53,249 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:48:53,250 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-14 00:48:53,250 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-14 00:48:53,255 [ scc.git] DEBUG Check current status 2024-10-14 00:48:53,255 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-14 00:48:53,259 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-10-14 00:48:53,259 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-14 00:48:53,303 [ scc.config] DEBUG Found remote.origin.url 2024-10-14 00:48:53,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-14 00:48:53,613 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-14 00:48:53,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-10-14 00:48:54,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-14 00:48:54,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-14 00:48:55,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-14 00:48:56,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-14 00:48:56,508 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:48:56,546 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:48:56,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-14 00:48:56,547 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-14 00:48:56,552 [ scc.git] DEBUG Check current status 2024-10-14 00:48:56,552 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-14 00:48:56,557 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-10-14 00:48:56,557 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-14 00:48:56,601 [ scc.config] DEBUG Found remote.origin.url 2024-10-14 00:48:56,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-14 00:48:56,908 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-14 00:48:57,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-10-14 00:48:57,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-14 00:48:57,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-14 00:48:58,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-14 00:48:58,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-14 00:48:58,790 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:48:58,833 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:48:58,834 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-14 00:48:58,834 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-14 00:48:58,840 [ scc.git] DEBUG Check current status 2024-10-14 00:48:58,840 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-14 00:48:58,845 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-14 00:48:58,845 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-10-14 00:48:58,892 [ scc.config] DEBUG Found remote.origin.url 2024-10-14 00:48:59,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-10-14 00:48:59,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-14 00:49:00,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-14 00:49:00,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-14 00:49:00,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-14 00:49:00,874 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:49:00,913 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:49:00,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-14 00:49:00,915 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-14 00:49:00,921 [ scc.git] DEBUG Check current status 2024-10-14 00:49:00,921 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-14 00:49:00,976 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-10-14 00:49:00,976 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-14 00:49:01,027 [ scc.config] DEBUG Found remote.origin.url 2024-10-14 00:49:01,028 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-10-14 00:49:01,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-14 00:49:01,281 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-14 00:49:01,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-10-14 00:49:01,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-14 00:49:02,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-14 00:49:02,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-14 00:49:03,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-14 00:49:03,145 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:49:03,187 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:49:03,187 [ scc.git] DEBUG Resetting... 2024-10-14 00:49:03,187 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-10-14 00:49:03,198 [ scc.git] DEBUG HEAD is now at e5dc0bc merge master -Dorg -Snone 2024-10-14 00:49:03,198 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-10-14 00:49:03,298 [ scc.git] DEBUG Check current status 2024-10-14 00:49:03,299 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-14 00:49:03,304 [ scc.git] DEBUG e5dc0bc merge master -Dorg -Snone 2024-10-14 00:49:03,304 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-14 00:49:03,348 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-14 00:49:03,350 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-14 00:49:03,353 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-14 00:49:03,356 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-14 00:49:03,365 [ scc.git] DEBUG 1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1 omero-figure (v7.1.0-65-g1c0e5f95) 2024-10-14 00:49:03,368 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-14 00:49:03,371 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-14 00:49:03,375 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-14 00:49:03,378 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-14 00:49:03,380 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-14 00:49:03,383 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-14 00:49:03,386 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-14 00:49:03,389 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-14 00:49:03,392 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-14 00:49:03,395 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-14 00:49:03,398 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-14 00:49:03,400 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-14 00:49:03,403 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-14 00:49:03,406 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-14 00:49:03,408 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-14 00:49:03,411 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-14 00:49:03,414 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-14 00:49:03,416 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-10-14 00:49:03,416 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-10-14 00:49:03,416 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-10-14 00:49:03,416 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-10-14 00:49:03,416 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-10-14 00:49:03,416 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-10-14 00:49:03,416 [ scc.repo] DEBUG ## PRs found: 2024-10-14 00:49:03,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-10-14 00:49:04,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/393 HTTP/1.1" 200 None 2024-10-14 00:49:04,100 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-14 00:49:04,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d HTTP/1.1" 200 None 2024-10-14 00:49:05,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:49:05,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d HTTP/1.1" 200 None 2024-10-14 00:49:06,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:49:06,061 [ scc.repo] DEBUG - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' 2024-10-14 00:49:06,062 [ scc.repo] DEBUG ## Branches found: 2024-10-14 00:49:06,062 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:49:06,062 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:49:06,068 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-14 00:49:06,073 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-14 00:49:06,073 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-14 00:49:06,078 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-14 00:49:06,083 [ scc.git] DEBUG Already up to date. 2024-10-14 00:49:06,083 [ scc.git] DEBUG Calling 'git fetch origin pull/393/head' 2024-10-14 00:49:07,488 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-10-14 00:49:07,488 [ scc.git] DEBUG * branch refs/pull/393/head -> FETCH_HEAD 2024-10-14 00:49:07,494 [ scc.git] DEBUG ## Unique users: [] 2024-10-14 00:49:07,494 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:49:07,494 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:49:07,500 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d' 2024-10-14 00:49:07,506 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:49:07,511 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 393 (Bump omero-figure from `5f62399` to `1c0e5f9`) 8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d' 2024-10-14 00:49:07,517 [ scc.git] DEBUG Already up to date. 2024-10-14 00:49:07,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:49:07,650 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-14 00:49:07,703 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:49:07,703 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:49:07,709 [ scc.repo] DEBUG ## PRs found: 2024-10-14 00:49:08,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 None 2024-10-14 00:49:08,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/issues/66 HTTP/1.1" 200 None 2024-10-14 00:49:09,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-10-14 00:49:09,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:49:09,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-14 00:49:10,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-10-14 00:49:10,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/statuses/6a9ec1416390843e1243e924ff9d05acf2966875?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:49:10,871 [ scc.repo] DEBUG - PR 66 jburel 'Gateway 5 9 2' 2024-10-14 00:49:10,871 [ scc.repo] DEBUG ## Branches found: 2024-10-14 00:49:10,871 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-14 00:49:10,871 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:49:10,872 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:49:10,878 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-14 00:49:10,883 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-14 00:49:10,884 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-14 00:49:10,890 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-14 00:49:10,897 [ scc.git] DEBUG Already up to date. 2024-10-14 00:49:10,897 [ scc.git] DEBUG Calling 'git fetch origin pull/66/head' 2024-10-14 00:49:11,435 [ scc.git] DEBUG From https://github.com/ome/minimal-omero-client 2024-10-14 00:49:11,436 [ scc.git] DEBUG * branch refs/pull/66/head -> FETCH_HEAD 2024-10-14 00:49:11,440 [ scc.git] DEBUG ## Unique users: [] 2024-10-14 00:49:11,440 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:49:11,441 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:49:11,446 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a9ec1416390843e1243e924ff9d05acf2966875' 2024-10-14 00:49:11,452 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:49:11,456 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 66 (Gateway 5 9 2) 6a9ec1416390843e1243e924ff9d05acf2966875' 2024-10-14 00:49:11,480 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:49:11,483 [ scc.git] DEBUG .github/workflows/maven.yml | 4 ++-- 2024-10-14 00:49:11,483 [ scc.git] DEBUG build.gradle | 4 ++-- 2024-10-14 00:49:11,483 [ scc.git] DEBUG pom.xml | 4 ++-- 2024-10-14 00:49:11,483 [ scc.git] DEBUG 3 files changed, 6 insertions(+), 6 deletions(-) 2024-10-14 00:49:11,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:49:11,636 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-14 00:49:11,675 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:49:11,675 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:49:11,680 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:49:11,716 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-14 00:49:11,722 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc4680aa820> has no local changes 2024-10-14 00:49:11,722 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Generated by OMERO-plugins-push#211 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/)' 2024-10-14 00:49:11,730 [ scc.git] DEBUG [detached HEAD b69ca9a] merge master -Dorg -Ssuccess-only 2024-10-14 00:49:11,730 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:49:11,730 [ scc.repo] DEBUG ## PRs found: 2024-10-14 00:49:12,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-10-14 00:49:12,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-10-14 00:49:12,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-10-14 00:49:13,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-10-14 00:49:14,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:49:14,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-14 00:49:15,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-10-14 00:49:15,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:49:15,526 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-10-14 00:49:15,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-10-14 00:49:16,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-10-14 00:49:16,435 [ scc.repo] DEBUG ## Branches found: 2024-10-14 00:49:16,435 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-14 00:49:16,435 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:49:16,435 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:49:16,441 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-14 00:49:16,446 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-14 00:49:16,447 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-14 00:49:16,452 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-14 00:49:16,456 [ scc.git] DEBUG Already up to date. 2024-10-14 00:49:16,457 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-10-14 00:49:16,881 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-10-14 00:49:16,881 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-10-14 00:49:16,885 [ scc.git] DEBUG ## Unique users: [] 2024-10-14 00:49:16,886 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:49:16,886 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:49:16,891 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-10-14 00:49:16,896 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:49:16,902 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-10-14 00:49:16,914 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:49:16,917 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-10-14 00:49:16,917 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-10-14 00:49:17,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:49:17,081 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-14 00:49:17,124 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:49:17,125 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:49:17,130 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:49:17,174 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-14 00:49:17,181 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc4680aa220> has no local changes 2024-10-14 00:49:17,181 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#211 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/)' 2024-10-14 00:49:17,191 [ scc.git] DEBUG [detached HEAD 948609d] merge master -Dorg -Ssuccess-only 2024-10-14 00:49:17,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:49:17,192 [ scc.repo] DEBUG ## PRs found: 2024-10-14 00:49:17,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-10-14 00:49:18,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-10-14 00:49:18,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-10-14 00:49:18,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-10-14 00:49:19,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-10-14 00:49:19,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-10-14 00:49:20,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:49:20,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-10-14 00:49:21,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:49:21,354 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-10-14 00:49:21,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-10-14 00:49:22,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-10-14 00:49:22,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-10-14 00:49:23,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-10-14 00:49:23,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-10-14 00:49:23,585 [ scc.repo] DEBUG ## Branches found: 2024-10-14 00:49:23,585 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-14 00:49:23,585 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:49:23,585 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:49:23,591 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-14 00:49:23,596 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-14 00:49:23,597 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-14 00:49:23,602 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-14 00:49:23,608 [ scc.git] DEBUG Already up to date. 2024-10-14 00:49:23,608 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-10-14 00:49:24,079 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-10-14 00:49:24,079 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-10-14 00:49:24,084 [ scc.git] DEBUG ## Unique users: [] 2024-10-14 00:49:24,084 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:49:24,084 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:49:24,090 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-10-14 00:49:24,097 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:49:24,101 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-10-14 00:49:24,119 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-10-14 00:49:24,119 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:49:24,123 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-10-14 00:49:24,123 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-10-14 00:49:24,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:49:24,260 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-14 00:49:24,302 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:49:24,302 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:49:24,307 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:49:24,347 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-14 00:49:24,355 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc4670597f0> has no local changes 2024-10-14 00:49:24,355 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#211 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/)' 2024-10-14 00:49:24,364 [ scc.git] DEBUG [detached HEAD f43d081] merge master -Dorg -Ssuccess-only 2024-10-14 00:49:24,365 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:49:24,365 [ scc.repo] DEBUG ## PRs found: 2024-10-14 00:49:24,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-10-14 00:49:25,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-10-14 00:49:25,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-10-14 00:49:26,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-10-14 00:49:26,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-14 00:49:27,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:49:27,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-14 00:49:27,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-14 00:49:28,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-10-14 00:49:28,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-14 00:49:29,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-10-14 00:49:29,234 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-10-14 00:49:29,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-10-14 00:49:30,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-10-14 00:49:30,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-10-14 00:49:31,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-10-14 00:49:31,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:49:32,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-10-14 00:49:32,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:49:32,463 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-10-14 00:49:32,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-10-14 00:49:33,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-10-14 00:49:33,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-10-14 00:49:34,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:49:34,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-10-14 00:49:35,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:49:35,240 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-10-14 00:49:35,240 [ scc.repo] DEBUG ## Branches found: 2024-10-14 00:49:35,240 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-14 00:49:35,241 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:49:35,241 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:49:35,247 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-14 00:49:35,252 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-14 00:49:35,252 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-14 00:49:35,257 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-14 00:49:35,262 [ scc.git] DEBUG Already up to date. 2024-10-14 00:49:35,262 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-10-14 00:49:35,594 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-14 00:49:35,594 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-10-14 00:49:35,599 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-10-14 00:49:36,191 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-14 00:49:36,192 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-10-14 00:49:36,196 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-10-14 00:49:36,566 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-14 00:49:36,567 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-10-14 00:49:36,571 [ scc.git] DEBUG ## Unique users: [] 2024-10-14 00:49:36,571 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:49:36,571 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:49:36,576 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-14 00:49:36,583 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:49:36,587 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-14 00:49:36,812 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-10-14 00:49:36,812 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-14 00:49:36,812 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-10-14 00:49:36,812 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-14 00:49:36,813 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-14 00:49:36,819 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-14 00:49:36,825 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-14 00:49:36,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:49:36,964 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-14 00:49:36,971 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-14 00:49:36,976 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#211](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-10-14 00:49:36,981 [ scc.config] DEBUG Found github.token 2024-10-14 00:49:36,981 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-10-14 00:49:36,981 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-14 00:49:36,987 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:49:36,991 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-14 00:49:37,090 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-10-14 00:49:37,090 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-10-14 00:49:37,090 [ scc.git] DEBUG Auto-merging setup.py 2024-10-14 00:49:37,090 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-10-14 00:49:37,090 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-14 00:49:37,090 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-10-14 00:49:37,091 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-10-14 00:49:37,091 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-14 00:49:37,091 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-14 00:49:37,097 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-14 00:49:37,106 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-14 00:49:37,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:49:37,354 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-14 00:49:37,362 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-14 00:49:37,367 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#211](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-10-14 00:49:37,371 [ scc.config] DEBUG Found github.token 2024-10-14 00:49:37,371 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-10-14 00:49:37,372 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-10-14 00:49:37,377 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:49:37,382 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-10-14 00:49:37,393 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-10-14 00:49:37,393 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-14 00:49:37,394 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:49:37,397 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-10-14 00:49:37,397 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-10-14 00:49:37,397 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-10-14 00:49:37,397 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-10-14 00:49:37,397 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-10-14 00:49:37,397 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-10-14 00:49:37,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:49:37,740 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-14 00:49:37,779 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:49:37,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:49:37,786 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:49:37,827 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-14 00:49:37,835 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc46704adf0> has no local changes 2024-10-14 00:49:37,835 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#211 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/)' 2024-10-14 00:49:37,845 [ scc.git] DEBUG [detached HEAD f660206] merge master -Dorg -Ssuccess-only 2024-10-14 00:49:37,845 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:49:37,845 [ scc.repo] DEBUG ## PRs found: 2024-10-14 00:49:38,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-10-14 00:49:38,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/598 HTTP/1.1" 200 None 2024-10-14 00:49:39,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/597 HTTP/1.1" 200 None 2024-10-14 00:49:39,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/596 HTTP/1.1" 200 None 2024-10-14 00:49:40,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595 HTTP/1.1" 200 None 2024-10-14 00:49:40,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595/comments HTTP/1.1" 200 None 2024-10-14 00:49:40,603 [ scc.repo] DEBUG # ... Include label: include 2024-10-14 00:49:41,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cb283024150d8f1fe9f02a312cfa2930001d7814 HTTP/1.1" 200 None 2024-10-14 00:49:41,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cb283024150d8f1fe9f02a312cfa2930001d7814/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:49:42,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cb283024150d8f1fe9f02a312cfa2930001d7814/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-14 00:49:42,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cb283024150d8f1fe9f02a312cfa2930001d7814 HTTP/1.1" 200 None 2024-10-14 00:49:43,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/cb283024150d8f1fe9f02a312cfa2930001d7814?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:49:43,152 [ scc.repo] DEBUG - PR 595 Rdornier 'Rotate image panel by 90°' 2024-10-14 00:49:43,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592 HTTP/1.1" 200 None 2024-10-14 00:49:44,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592/comments HTTP/1.1" 200 None 2024-10-14 00:49:44,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-10-14 00:49:44,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:49:45,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-14 00:49:45,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-10-14 00:49:46,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/41a9df405c9f6580c89a64fc2c6eed778c431b1b?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:49:46,240 [ scc.repo] DEBUG - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-10-14 00:49:46,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591 HTTP/1.1" 200 None 2024-10-14 00:49:47,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591/comments HTTP/1.1" 200 None 2024-10-14 00:49:47,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584 HTTP/1.1" 200 None 2024-10-14 00:49:48,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584/comments HTTP/1.1" 200 None 2024-10-14 00:49:48,020 [ scc.repo] DEBUG # ... Include label: include 2024-10-14 00:49:48,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bcdf94652b2841ead8d4d9386ea3aff751e64b4a HTTP/1.1" 200 None 2024-10-14 00:49:49,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bcdf94652b2841ead8d4d9386ea3aff751e64b4a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:49:49,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bcdf94652b2841ead8d4d9386ea3aff751e64b4a/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-14 00:49:49,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bcdf94652b2841ead8d4d9386ea3aff751e64b4a HTTP/1.1" 200 None 2024-10-14 00:49:50,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/bcdf94652b2841ead8d4d9386ea3aff751e64b4a?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:49:50,304 [ scc.repo] DEBUG - PR 584 Rdornier 'Link url to image' 2024-10-14 00:49:50,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578 HTTP/1.1" 200 None 2024-10-14 00:49:51,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 200 None 2024-10-14 00:49:51,331 [ scc.repo] DEBUG # ... Include label: include 2024-10-14 00:49:51,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3e0427ff792396a9b61921fac9f1c8ef656522cd HTTP/1.1" 200 None 2024-10-14 00:49:52,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3e0427ff792396a9b61921fac9f1c8ef656522cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:49:52,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3e0427ff792396a9b61921fac9f1c8ef656522cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-14 00:49:53,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3e0427ff792396a9b61921fac9f1c8ef656522cd HTTP/1.1" 200 None 2024-10-14 00:49:53,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3e0427ff792396a9b61921fac9f1c8ef656522cd?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:49:53,724 [ scc.repo] DEBUG - PR 578 Rdornier 'Image outline' 2024-10-14 00:49:54,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-10-14 00:49:54,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-10-14 00:49:55,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/13200965/issues/577/comments?page=2 HTTP/1.1" 200 None 2024-10-14 00:49:55,279 [ scc.repo] DEBUG # ... Include label: include 2024-10-14 00:49:55,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4069931439f9e3daecd680e02fd1af13f7e2b755 HTTP/1.1" 200 None 2024-10-14 00:49:56,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4069931439f9e3daecd680e02fd1af13f7e2b755/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:49:56,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4069931439f9e3daecd680e02fd1af13f7e2b755/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-14 00:49:57,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4069931439f9e3daecd680e02fd1af13f7e2b755 HTTP/1.1" 200 None 2024-10-14 00:49:57,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/4069931439f9e3daecd680e02fd1af13f7e2b755?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:49:57,537 [ scc.repo] DEBUG - PR 577 Rdornier 'Fill rois' 2024-10-14 00:49:57,537 [ scc.repo] DEBUG ## Branches found: 2024-10-14 00:49:57,537 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-14 00:49:57,538 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:49:57,538 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:49:57,544 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-14 00:49:57,550 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-14 00:49:57,550 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-14 00:49:57,556 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-14 00:49:57,562 [ scc.git] DEBUG Already up to date. 2024-10-14 00:49:57,562 [ scc.git] DEBUG Calling 'git fetch origin pull/577/head' 2024-10-14 00:49:58,662 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-14 00:49:58,662 [ scc.git] DEBUG * branch refs/pull/577/head -> FETCH_HEAD 2024-10-14 00:49:58,668 [ scc.git] DEBUG Calling 'git fetch origin pull/578/head' 2024-10-14 00:49:58,979 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-14 00:49:58,979 [ scc.git] DEBUG * branch refs/pull/578/head -> FETCH_HEAD 2024-10-14 00:49:58,985 [ scc.git] DEBUG Calling 'git fetch origin pull/584/head' 2024-10-14 00:49:59,288 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-14 00:49:59,288 [ scc.git] DEBUG * branch refs/pull/584/head -> FETCH_HEAD 2024-10-14 00:49:59,294 [ scc.git] DEBUG Calling 'git fetch origin pull/592/head' 2024-10-14 00:49:59,767 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-14 00:49:59,768 [ scc.git] DEBUG * branch refs/pull/592/head -> FETCH_HEAD 2024-10-14 00:49:59,773 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2024-10-14 00:50:00,071 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-14 00:50:00,071 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2024-10-14 00:50:00,076 [ scc.git] DEBUG ## Unique users: [] 2024-10-14 00:50:00,077 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:50:00,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:00,083 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4069931439f9e3daecd680e02fd1af13f7e2b755' 2024-10-14 00:50:00,092 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:00,097 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 577 (Fill rois) 4069931439f9e3daecd680e02fd1af13f7e2b755' 2024-10-14 00:50:00,161 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:50:00,168 [ scc.git] DEBUG .gitignore | 2 + 2024-10-14 00:50:00,168 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 21 ++++++-- 2024-10-14 00:50:00,168 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-10-14 00:50:00,168 [ scc.git] DEBUG src/js/models/roi_model.js | 11 ++++ 2024-10-14 00:50:00,168 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 42 ++++++++++++++- 2024-10-14 00:50:00,168 [ scc.git] DEBUG src/js/shape_editor/line.js | 16 ++++++ 2024-10-14 00:50:00,168 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 40 +++++++++++++- 2024-10-14 00:50:00,168 [ scc.git] DEBUG src/js/shape_editor/rect.js | 48 +++++++++++++++-- 2024-10-14 00:50:00,168 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 62 +++++++++++++++++++++- 2024-10-14 00:50:00,168 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 34 ++++++++++-- 2024-10-14 00:50:00,168 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 56 ++++++++++++++++++- 2024-10-14 00:50:00,168 [ scc.git] DEBUG 11 files changed, 316 insertions(+), 17 deletions(-) 2024-10-14 00:50:00,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:50:00,304 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3e0427ff792396a9b61921fac9f1c8ef656522cd' 2024-10-14 00:50:00,315 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:00,322 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 578 (Image outline) 3e0427ff792396a9b61921fac9f1c8ef656522cd' 2024-10-14 00:50:00,674 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-10-14 00:50:00,674 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-14 00:50:00,674 [ scc.git] DEBUG Auto-merging src/js/views/roi_modal_view.js 2024-10-14 00:50:00,675 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:50:00,681 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 231 ++++++++++++++------- 2024-10-14 00:50:00,681 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-10-14 00:50:00,681 [ scc.git] DEBUG src/js/models/panel_model.js | 31 +++ 2024-10-14 00:50:00,681 [ scc.git] DEBUG src/js/views/panel_view.js | 53 ++++- 2024-10-14 00:50:00,681 [ scc.git] DEBUG src/js/views/right_panel_view.js | 56 ++++- 2024-10-14 00:50:00,681 [ scc.git] DEBUG src/templates/rois_form.template.html | 68 +++++- 2024-10-14 00:50:00,681 [ scc.git] DEBUG 6 files changed, 361 insertions(+), 79 deletions(-) 2024-10-14 00:50:00,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:50:00,812 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bcdf94652b2841ead8d4d9386ea3aff751e64b4a' 2024-10-14 00:50:00,822 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:00,826 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 584 (Link url to image) bcdf94652b2841ead8d4d9386ea3aff751e64b4a' 2024-10-14 00:50:00,851 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:50:00,856 [ scc.git] DEBUG omero_figure/views.py | 134 +++++++++++++++++++++++++++++++++++++----- 2024-10-14 00:50:00,856 [ scc.git] DEBUG src/js/models/figure_model.js | 10 ++-- 2024-10-14 00:50:00,856 [ scc.git] DEBUG src/js/views/figure_view.js | 10 ++-- 2024-10-14 00:50:00,856 [ scc.git] DEBUG 3 files changed, 128 insertions(+), 26 deletions(-) 2024-10-14 00:50:01,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:50:01,197 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-10-14 00:50:01,207 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:01,212 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 592 (Filter owners and groups dropdown lists) 41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-10-14 00:50:01,294 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:50:01,298 [ scc.git] DEBUG src/js/views/files.js | 33 ++++++++++++++++++++++++--------- 2024-10-14 00:50:01,298 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 9 deletions(-) 2024-10-14 00:50:01,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:50:01,571 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cb283024150d8f1fe9f02a312cfa2930001d7814' 2024-10-14 00:50:01,581 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:01,585 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (Rotate image panel by 90°) cb283024150d8f1fe9f02a312cfa2930001d7814' 2024-10-14 00:50:01,683 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-14 00:50:01,683 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-10-14 00:50:01,683 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2024-10-14 00:50:01,683 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-10-14 00:50:01,684 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:50:01,689 [ scc.git] DEBUG package-lock.json | 32 ++++++----------------- 2024-10-14 00:50:01,689 [ scc.git] DEBUG package.json | 2 +- 2024-10-14 00:50:01,689 [ scc.git] DEBUG src/css/figure.css | 13 ++++++++- 2024-10-14 00:50:01,689 [ scc.git] DEBUG src/js/models/panel_model.js | 21 ++++++++++++--- 2024-10-14 00:50:01,689 [ scc.git] DEBUG src/js/views/panel_view.js | 6 ++--- 2024-10-14 00:50:01,689 [ scc.git] DEBUG src/js/views/right_panel_view.js | 14 +++++++++- 2024-10-14 00:50:01,689 [ scc.git] DEBUG src/templates/image_display_options.template.html | 6 +++++ 2024-10-14 00:50:01,689 [ scc.git] DEBUG 7 files changed, 61 insertions(+), 33 deletions(-) 2024-10-14 00:50:01,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:50:01,993 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-14 00:50:02,033 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:50:02,033 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:02,040 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:50:02,078 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-14 00:50:02,088 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc46704c820> has no local changes 2024-10-14 00:50:02,088 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) - PR 596 Tom-TBT 'Dynamic lut for figure' (user: Tom-TBT) - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 577 Rdornier 'Fill rois' - PR 578 Rdornier 'Image outline' - PR 584 Rdornier 'Link url to image' - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 595 Rdornier 'Rotate image panel by 90°' Generated by OMERO-plugins-push#211 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/)' 2024-10-14 00:50:02,098 [ scc.git] DEBUG [detached HEAD 600534ff] merge master -Dorg -Ssuccess-only 2024-10-14 00:50:02,099 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:50:02,099 [ scc.repo] DEBUG ## PRs found: 2024-10-14 00:50:02,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-10-14 00:50:02,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-10-14 00:50:03,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-10-14 00:50:03,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-10-14 00:50:04,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:50:04,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-10-14 00:50:05,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:50:05,132 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-10-14 00:50:05,132 [ scc.repo] DEBUG ## Branches found: 2024-10-14 00:50:05,132 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-14 00:50:05,132 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:50:05,132 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:05,138 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-14 00:50:05,144 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-14 00:50:05,145 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-14 00:50:05,150 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-14 00:50:05,155 [ scc.git] DEBUG Already up to date. 2024-10-14 00:50:05,156 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-10-14 00:50:05,513 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-10-14 00:50:05,513 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-10-14 00:50:05,519 [ scc.git] DEBUG ## Unique users: [] 2024-10-14 00:50:05,519 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:50:05,519 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:05,524 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-10-14 00:50:05,529 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:05,534 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-10-14 00:50:05,564 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-10-14 00:50:05,565 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:50:05,567 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-10-14 00:50:05,567 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-10-14 00:50:05,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:50:05,696 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-14 00:50:05,736 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:50:05,736 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:05,742 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:50:05,782 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-14 00:50:05,789 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc467007700> has no local changes 2024-10-14 00:50:05,790 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#211 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/)' 2024-10-14 00:50:05,798 [ scc.git] DEBUG [detached HEAD e0084e4] merge master -Dorg -Ssuccess-only 2024-10-14 00:50:05,799 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:50:05,799 [ scc.repo] DEBUG ## PRs found: 2024-10-14 00:50:06,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-10-14 00:50:06,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-10-14 00:50:06,671 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-14 00:50:07,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-10-14 00:50:07,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:50:08,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-14 00:50:08,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-10-14 00:50:09,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:50:09,094 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-10-14 00:50:09,094 [ scc.repo] DEBUG ## Branches found: 2024-10-14 00:50:09,094 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-14 00:50:09,094 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:50:09,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:09,101 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-14 00:50:09,106 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-14 00:50:09,106 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-14 00:50:09,112 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-14 00:50:09,118 [ scc.git] DEBUG Already up to date. 2024-10-14 00:50:09,118 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-10-14 00:50:09,423 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-10-14 00:50:09,423 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-10-14 00:50:09,429 [ scc.git] DEBUG ## Unique users: [] 2024-10-14 00:50:09,429 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:50:09,429 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:09,435 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-10-14 00:50:09,441 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:09,446 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-10-14 00:50:09,458 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:50:09,462 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-10-14 00:50:09,462 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-10-14 00:50:09,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:50:09,592 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-14 00:50:09,632 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:50:09,632 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:09,637 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:50:09,674 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-14 00:50:09,681 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc467026cd0> has no local changes 2024-10-14 00:50:09,681 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#211 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/)' 2024-10-14 00:50:09,690 [ scc.git] DEBUG [detached HEAD bb5922f] merge master -Dorg -Ssuccess-only 2024-10-14 00:50:09,691 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:50:09,691 [ scc.repo] DEBUG ## PRs found: 2024-10-14 00:50:10,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-10-14 00:50:10,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/486 HTTP/1.1" 200 None 2024-10-14 00:50:11,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/485 HTTP/1.1" 200 None 2024-10-14 00:50:11,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/484 HTTP/1.1" 200 None 2024-10-14 00:50:12,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/484/comments HTTP/1.1" 200 None 2024-10-14 00:50:12,006 [ scc.repo] DEBUG # ... Include label: include 2024-10-14 00:50:12,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/68b90aebf749c074bde218ba36d3ce662068cd05 HTTP/1.1" 200 None 2024-10-14 00:50:13,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/68b90aebf749c074bde218ba36d3ce662068cd05/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:50:13,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/68b90aebf749c074bde218ba36d3ce662068cd05/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-14 00:50:13,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/68b90aebf749c074bde218ba36d3ce662068cd05 HTTP/1.1" 200 None 2024-10-14 00:50:14,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/68b90aebf749c074bde218ba36d3ce662068cd05?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:50:14,332 [ scc.repo] DEBUG - PR 484 barrettMCW 'improved mirroring' 2024-10-14 00:50:14,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/483 HTTP/1.1" 200 None 2024-10-14 00:50:14,790 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-14 00:50:15,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-10-14 00:50:15,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:50:16,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-14 00:50:16,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-10-14 00:50:17,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/384771c9fd794e2b472a35dca65e6ed96be98c4d?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:50:17,249 [ scc.repo] DEBUG - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-10-14 00:50:17,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482 HTTP/1.1" 200 None 2024-10-14 00:50:18,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482/comments HTTP/1.1" 200 None 2024-10-14 00:50:18,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-10-14 00:50:19,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:50:19,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-14 00:50:20,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-10-14 00:50:20,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:50:20,578 [ scc.repo] DEBUG - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-10-14 00:50:21,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-10-14 00:50:21,073 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-14 00:50:21,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-10-14 00:50:22,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:50:22,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-14 00:50:23,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-10-14 00:50:23,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:50:23,564 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-10-14 00:50:23,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-10-14 00:50:23,995 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-14 00:50:24,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-10-14 00:50:25,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:50:25,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-14 00:50:25,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-10-14 00:50:26,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:50:26,395 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-10-14 00:50:26,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-10-14 00:50:27,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-10-14 00:50:27,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-10-14 00:50:28,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:50:28,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-14 00:50:29,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-10-14 00:50:29,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:50:29,612 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-10-14 00:50:30,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-10-14 00:50:30,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-10-14 00:50:31,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-10-14 00:50:31,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:50:31,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-14 00:50:32,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-10-14 00:50:32,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:50:32,879 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-10-14 00:50:33,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-10-14 00:50:33,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-10-14 00:50:34,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-10-14 00:50:34,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:50:35,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-10-14 00:50:35,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:50:35,627 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-10-14 00:50:35,627 [ scc.repo] DEBUG ## Branches found: 2024-10-14 00:50:35,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-14 00:50:35,628 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:50:35,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:35,635 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-14 00:50:35,641 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-14 00:50:35,642 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-14 00:50:35,870 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-14 00:50:35,877 [ scc.git] DEBUG Already up to date. 2024-10-14 00:50:35,877 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-10-14 00:50:36,258 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-14 00:50:36,259 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-10-14 00:50:36,264 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-10-14 00:50:38,127 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-14 00:50:38,127 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-10-14 00:50:38,132 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-10-14 00:50:38,757 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-14 00:50:38,757 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-10-14 00:50:38,763 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-10-14 00:50:39,058 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-14 00:50:39,058 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-10-14 00:50:39,064 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-10-14 00:50:39,362 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-14 00:50:39,362 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-10-14 00:50:39,367 [ scc.git] DEBUG Calling 'git fetch origin pull/482/head' 2024-10-14 00:50:39,663 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-14 00:50:39,663 [ scc.git] DEBUG * branch refs/pull/482/head -> FETCH_HEAD 2024-10-14 00:50:39,668 [ scc.git] DEBUG Calling 'git fetch origin pull/483/head' 2024-10-14 00:50:39,964 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-14 00:50:39,964 [ scc.git] DEBUG * branch refs/pull/483/head -> FETCH_HEAD 2024-10-14 00:50:39,969 [ scc.git] DEBUG Calling 'git fetch origin pull/484/head' 2024-10-14 00:50:40,758 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-14 00:50:40,758 [ scc.git] DEBUG * branch refs/pull/484/head -> FETCH_HEAD 2024-10-14 00:50:40,763 [ scc.git] DEBUG ## Unique users: [] 2024-10-14 00:50:40,763 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:50:40,763 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:40,770 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-10-14 00:50:40,779 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:40,793 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-10-14 00:50:40,835 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-10-14 00:50:40,836 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:50:40,839 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-10-14 00:50:40,839 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-10-14 00:50:40,839 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-10-14 00:50:40,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:50:40,981 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-10-14 00:50:40,990 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:40,995 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-10-14 00:50:41,040 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-10-14 00:50:41,040 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-10-14 00:50:41,040 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-10-14 00:50:41,040 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-10-14 00:50:41,041 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:50:41,045 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-10-14 00:50:41,046 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-10-14 00:50:41,046 [ scc.git] DEBUG src/app/header.html | 5 + 2024-10-14 00:50:41,046 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-10-14 00:50:41,046 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-10-14 00:50:41,046 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-10-14 00:50:41,046 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-10-14 00:50:41,046 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-10-14 00:50:41,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:50:41,379 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-10-14 00:50:41,387 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:41,394 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-10-14 00:50:41,597 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-10-14 00:50:41,598 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:50:41,602 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-10-14 00:50:41,602 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-10-14 00:50:41,602 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-10-14 00:50:41,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:50:41,763 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-10-14 00:50:41,770 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:41,777 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-10-14 00:50:41,878 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:50:41,888 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-10-14 00:50:41,888 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-10-14 00:50:42,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:50:42,149 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-10-14 00:50:42,166 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:42,172 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-10-14 00:50:42,430 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-14 00:50:42,431 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:50:42,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:50:42,574 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-10-14 00:50:42,583 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:42,589 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 482 (Support ?collapse_left/right and ?full_page=true) 7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-10-14 00:50:43,033 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-10-14 00:50:43,033 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-10-14 00:50:43,033 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-10-14 00:50:43,034 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:50:43,038 [ scc.git] DEBUG src/app/context.js | 12 +++++++++++ 2024-10-14 00:50:43,038 [ scc.git] DEBUG src/app/index.js | 5 +---- 2024-10-14 00:50:43,038 [ scc.git] DEBUG src/model/image_info.js | 1 - 2024-10-14 00:50:43,039 [ scc.git] DEBUG src/utils/constants.js | 5 ++++- 2024-10-14 00:50:43,039 [ scc.git] DEBUG src/utils/ui.js | 44 ++++++++++++++++++++++---------------- 2024-10-14 00:50:43,039 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 1 - 2024-10-14 00:50:43,039 [ scc.git] DEBUG 6 files changed, 42 insertions(+), 26 deletions(-) 2024-10-14 00:50:43,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:50:43,222 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-10-14 00:50:43,286 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:43,292 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 483 (Bump webpack from 5.82.0 to 5.94.0) 384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-10-14 00:50:43,422 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-14 00:50:43,423 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:50:43,434 [ scc.git] DEBUG package-lock.json | 686 ++++++++++++++++++++++++++---------------------------- 2024-10-14 00:50:43,434 [ scc.git] DEBUG package.json | 2 +- 2024-10-14 00:50:43,434 [ scc.git] DEBUG 2 files changed, 329 insertions(+), 359 deletions(-) 2024-10-14 00:50:43,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:50:43,602 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...68b90aebf749c074bde218ba36d3ce662068cd05' 2024-10-14 00:50:43,611 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:43,617 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 484 (improved mirroring) 68b90aebf749c074bde218ba36d3ce662068cd05' 2024-10-14 00:50:43,795 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:50:43,798 [ scc.git] DEBUG src/viewers/viewer/controls/Mirror.js | 235 ++++++++++++++++------------------ 2024-10-14 00:50:43,798 [ scc.git] DEBUG 1 file changed, 111 insertions(+), 124 deletions(-) 2024-10-14 00:50:43,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:50:43,978 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-14 00:50:44,020 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:50:44,020 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:44,026 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:50:44,066 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-14 00:50:44,077 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc467027e50> has no local changes 2024-10-14 00:50:44,077 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 486 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) - PR 485 Tom-TBT 'Dynamic LUT for iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' - PR 484 barrettMCW 'improved mirroring' Generated by OMERO-plugins-push#211 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/)' 2024-10-14 00:50:44,089 [ scc.git] DEBUG [detached HEAD e13fe89] merge master -Dorg -Ssuccess-only 2024-10-14 00:50:44,089 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:50:44,090 [ scc.repo] DEBUG ## PRs found: 2024-10-14 00:50:44,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-10-14 00:50:44,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/86 HTTP/1.1" 200 None 2024-10-14 00:50:45,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/86/comments HTTP/1.1" 200 None 2024-10-14 00:50:45,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b HTTP/1.1" 200 None 2024-10-14 00:50:46,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:50:46,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-14 00:50:47,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-10-14 00:50:47,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-10-14 00:50:48,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-10-14 00:50:48,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:50:49,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-10-14 00:50:49,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:50:49,680 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-10-14 00:50:49,681 [ scc.repo] DEBUG ## Branches found: 2024-10-14 00:50:49,681 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-14 00:50:49,681 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:50:49,681 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:49,687 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-14 00:50:49,692 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-14 00:50:49,693 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-14 00:50:49,698 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-14 00:50:49,703 [ scc.git] DEBUG Already up to date. 2024-10-14 00:50:49,703 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-10-14 00:50:50,057 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-10-14 00:50:50,057 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-10-14 00:50:50,062 [ scc.git] DEBUG ## Unique users: [] 2024-10-14 00:50:50,062 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:50:50,063 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:50,068 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-10-14 00:50:50,075 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:50,080 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-10-14 00:50:50,090 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:50:50,092 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-10-14 00:50:50,092 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-10-14 00:50:50,092 [ scc.git] DEBUG requirements.txt | 2 +- 2024-10-14 00:50:50,092 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-10-14 00:50:50,092 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-10-14 00:50:50,092 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-10-14 00:50:50,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:50:50,231 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-14 00:50:50,271 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:50:50,271 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:50,277 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:50:50,317 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-14 00:50:50,330 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc465fc4370> has no local changes 2024-10-14 00:50:50,331 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#211 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/)' 2024-10-14 00:50:50,345 [ scc.git] DEBUG [detached HEAD 62b9db3] merge master -Dorg -Ssuccess-only 2024-10-14 00:50:50,346 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:50:50,346 [ scc.repo] DEBUG ## PRs found: 2024-10-14 00:50:50,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-10-14 00:50:51,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86 HTTP/1.1" 200 None 2024-10-14 00:50:51,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86/comments HTTP/1.1" 200 None 2024-10-14 00:50:52,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-10-14 00:50:52,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:50:53,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-10-14 00:50:53,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/d222577494040c63f4ce3c1a266d43257c9f1c61?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:50:53,427 [ scc.repo] DEBUG - PR 86 dominikl 'Add tablename option' 2024-10-14 00:50:53,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-10-14 00:50:54,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-10-14 00:50:54,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-10-14 00:50:55,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:50:55,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-10-14 00:50:56,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:50:56,154 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-10-14 00:50:56,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-10-14 00:50:57,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-10-14 00:50:57,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-10-14 00:50:57,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:50:58,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-10-14 00:50:58,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:50:58,864 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-10-14 00:50:58,864 [ scc.repo] DEBUG ## Branches found: 2024-10-14 00:50:58,864 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-14 00:50:58,864 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:50:58,865 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:50:58,871 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-14 00:50:58,876 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-14 00:50:58,876 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-14 00:50:58,883 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-14 00:50:58,890 [ scc.git] DEBUG Already up to date. 2024-10-14 00:50:58,890 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-10-14 00:50:59,611 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-14 00:50:59,611 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-10-14 00:50:59,616 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-10-14 00:51:00,301 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-14 00:51:00,301 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-10-14 00:51:00,306 [ scc.git] DEBUG Calling 'git fetch origin pull/86/head' 2024-10-14 00:51:00,600 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-14 00:51:00,600 [ scc.git] DEBUG * branch refs/pull/86/head -> FETCH_HEAD 2024-10-14 00:51:00,605 [ scc.git] DEBUG ## Unique users: [] 2024-10-14 00:51:00,605 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:00,605 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:00,611 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-14 00:51:00,618 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:00,623 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-14 00:51:00,694 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-10-14 00:51:00,694 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-10-14 00:51:00,694 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-10-14 00:51:00,694 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-10-14 00:51:00,694 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-14 00:51:00,695 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-14 00:51:00,701 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-14 00:51:00,708 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-14 00:51:00,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:00,845 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-14 00:51:00,853 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-14 00:51:00,860 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#211](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-10-14 00:51:00,864 [ scc.config] DEBUG Found github.token 2024-10-14 00:51:00,865 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-10-14 00:51:00,865 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-14 00:51:00,871 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:00,876 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-14 00:51:00,913 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-10-14 00:51:00,913 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-10-14 00:51:00,913 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-10-14 00:51:00,913 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-14 00:51:00,914 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-14 00:51:00,920 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-14 00:51:00,928 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-14 00:51:01,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:01,227 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-14 00:51:01,234 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-14 00:51:01,239 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#211](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-10-14 00:51:01,244 [ scc.config] DEBUG Found github.token 2024-10-14 00:51:01,244 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-10-14 00:51:01,244 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-10-14 00:51:01,249 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:01,254 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 86 (Add tablename option) d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-10-14 00:51:01,264 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:51:01,266 [ scc.git] DEBUG src/omero_metadata/cli.py | 10 ++++++++-- 2024-10-14 00:51:01,266 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 2 deletions(-) 2024-10-14 00:51:01,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:01,606 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-14 00:51:01,647 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:01,647 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:01,652 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:51:01,689 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-14 00:51:01,695 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc465fc3ee0> has no local changes 2024-10-14 00:51:01,695 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#211 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/)' 2024-10-14 00:51:01,704 [ scc.git] DEBUG [detached HEAD 87da365] merge master -Dorg -Ssuccess-only 2024-10-14 00:51:01,704 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:51:01,704 [ scc.repo] DEBUG ## PRs found: 2024-10-14 00:51:02,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-10-14 00:51:02,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-10-14 00:51:02,683 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-14 00:51:03,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-10-14 00:51:03,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:51:04,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-14 00:51:04,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-10-14 00:51:05,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:51:05,262 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-10-14 00:51:05,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-10-14 00:51:05,709 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-14 00:51:06,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-10-14 00:51:06,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:51:07,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-14 00:51:07,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-10-14 00:51:08,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:51:08,067 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-10-14 00:51:08,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-10-14 00:51:08,505 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-14 00:51:09,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-10-14 00:51:09,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:51:10,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-14 00:51:10,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-10-14 00:51:11,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:51:11,082 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-10-14 00:51:11,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-10-14 00:51:11,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-10-14 00:51:12,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-10-14 00:51:12,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-10-14 00:51:13,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-10-14 00:51:13,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-10-14 00:51:13,845 [ scc.repo] DEBUG ## Branches found: 2024-10-14 00:51:13,845 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-14 00:51:13,846 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:13,846 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:13,853 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-14 00:51:13,857 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-14 00:51:13,858 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-14 00:51:13,862 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-14 00:51:13,867 [ scc.git] DEBUG Already up to date. 2024-10-14 00:51:13,868 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-10-14 00:51:14,207 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-14 00:51:14,207 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-10-14 00:51:14,212 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-10-14 00:51:14,500 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-14 00:51:14,500 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-10-14 00:51:14,505 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-10-14 00:51:14,807 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-14 00:51:14,807 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-10-14 00:51:14,813 [ scc.git] DEBUG ## Unique users: [] 2024-10-14 00:51:14,813 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:14,813 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:14,821 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-10-14 00:51:14,827 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:14,833 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-10-14 00:51:14,844 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:51:14,846 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-10-14 00:51:14,846 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-10-14 00:51:14,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:14,989 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-10-14 00:51:14,995 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:15,000 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-10-14 00:51:15,021 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-14 00:51:15,022 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:51:15,025 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-10-14 00:51:15,025 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-10-14 00:51:15,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:15,367 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-10-14 00:51:15,373 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:15,378 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-10-14 00:51:15,390 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-14 00:51:15,391 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:51:15,394 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-10-14 00:51:15,394 [ scc.git] DEBUG package.json | 2 +- 2024-10-14 00:51:15,394 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-10-14 00:51:15,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:15,768 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-14 00:51:15,813 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:15,813 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:15,820 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:51:15,861 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-14 00:51:15,869 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc465fd2be0> has no local changes 2024-10-14 00:51:15,869 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#211 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/)' 2024-10-14 00:51:15,881 [ scc.git] DEBUG [detached HEAD b7cdf26] merge master -Dorg -Ssuccess-only 2024-10-14 00:51:15,881 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:51:15,881 [ scc.repo] DEBUG ## PRs found: 2024-10-14 00:51:16,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-10-14 00:51:16,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-10-14 00:51:17,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-10-14 00:51:17,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:51:18,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-10-14 00:51:18,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:51:18,578 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-10-14 00:51:18,578 [ scc.repo] DEBUG ## Branches found: 2024-10-14 00:51:18,578 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-14 00:51:18,578 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:18,578 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:18,584 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-14 00:51:18,588 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-14 00:51:18,588 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-14 00:51:18,593 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-14 00:51:18,600 [ scc.git] DEBUG Already up to date. 2024-10-14 00:51:18,600 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-10-14 00:51:18,911 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-10-14 00:51:18,911 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-10-14 00:51:18,916 [ scc.git] DEBUG ## Unique users: [] 2024-10-14 00:51:18,916 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:18,916 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:18,922 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-10-14 00:51:18,927 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:18,933 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-10-14 00:51:18,942 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:51:19,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:19,083 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-14 00:51:19,120 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:19,121 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:19,126 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:51:19,164 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-14 00:51:19,171 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc46479cfa0> has no local changes 2024-10-14 00:51:19,171 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#211 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/)' 2024-10-14 00:51:19,181 [ scc.git] DEBUG [detached HEAD 535d1bc] merge master -Dorg -Ssuccess-only 2024-10-14 00:51:19,182 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:51:19,182 [ scc.repo] DEBUG ## PRs found: 2024-10-14 00:51:19,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-10-14 00:51:20,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-10-14 00:51:20,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-10-14 00:51:20,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-10-14 00:51:21,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-10-14 00:51:21,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:51:22,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-10-14 00:51:22,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:51:22,807 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-10-14 00:51:22,807 [ scc.repo] DEBUG ## Branches found: 2024-10-14 00:51:22,807 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-14 00:51:22,807 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:22,808 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:22,814 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-14 00:51:22,820 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-14 00:51:22,820 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-14 00:51:22,827 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-14 00:51:22,832 [ scc.git] DEBUG Already up to date. 2024-10-14 00:51:22,832 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-10-14 00:51:23,140 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-10-14 00:51:23,141 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-10-14 00:51:23,146 [ scc.git] DEBUG ## Unique users: [] 2024-10-14 00:51:23,147 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:23,147 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:23,153 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-10-14 00:51:23,160 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:23,166 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-10-14 00:51:23,175 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-10-14 00:51:23,175 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:51:23,178 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-10-14 00:51:23,178 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-10-14 00:51:23,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:23,314 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-14 00:51:23,355 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:23,356 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:23,361 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:51:23,403 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-14 00:51:23,410 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc464783e80> has no local changes 2024-10-14 00:51:23,411 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#211 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/)' 2024-10-14 00:51:23,419 [ scc.git] DEBUG [detached HEAD 4e9e633] merge master -Dorg -Ssuccess-only 2024-10-14 00:51:23,419 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:51:23,420 [ scc.repo] DEBUG ## PRs found: 2024-10-14 00:51:23,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-10-14 00:51:24,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-10-14 00:51:24,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-10-14 00:51:25,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-10-14 00:51:25,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:51:26,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-10-14 00:51:26,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:51:26,547 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-10-14 00:51:26,547 [ scc.repo] DEBUG ## Branches found: 2024-10-14 00:51:26,548 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-14 00:51:26,548 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:26,548 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:26,555 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-14 00:51:26,561 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-14 00:51:26,562 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-14 00:51:26,570 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-14 00:51:26,577 [ scc.git] DEBUG Already up to date. 2024-10-14 00:51:26,577 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-10-14 00:51:26,971 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-10-14 00:51:26,972 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-10-14 00:51:26,976 [ scc.git] DEBUG ## Unique users: [] 2024-10-14 00:51:26,976 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:26,976 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:26,982 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-14 00:51:26,988 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:26,993 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-14 00:51:27,104 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-10-14 00:51:27,104 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-10-14 00:51:27,104 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-10-14 00:51:27,104 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-10-14 00:51:27,104 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-10-14 00:51:27,104 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-10-14 00:51:27,104 [ scc.git] DEBUG Auto-merging setup.py 2024-10-14 00:51:27,104 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-10-14 00:51:27,104 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-14 00:51:27,105 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-14 00:51:27,111 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-10-14 00:51:27,116 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-10-14 00:51:27,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:27,246 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-14 00:51:27,254 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-10-14 00:51:27,262 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#211](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - omero_signup/signup_settings.py - omero_signup/urls.py - setup.py --conflicts 2024-10-14 00:51:27,268 [ scc.config] DEBUG Found github.token 2024-10-14 00:51:27,268 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-10-14 00:51:27,269 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-14 00:51:27,311 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:27,311 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:27,318 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:51:27,362 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-14 00:51:27,373 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc464786e50> has no local changes 2024-10-14 00:51:27,373 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#211 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/)' 2024-10-14 00:51:27,386 [ scc.git] DEBUG [detached HEAD 396eaf6] merge master -Dorg -Ssuccess-only 2024-10-14 00:51:27,386 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:51:27,387 [ scc.repo] DEBUG ## PRs found: 2024-10-14 00:51:27,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-10-14 00:51:28,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-10-14 00:51:28,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-10-14 00:51:29,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-10-14 00:51:29,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:51:30,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-10-14 00:51:30,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:51:30,418 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-10-14 00:51:30,418 [ scc.repo] DEBUG ## Branches found: 2024-10-14 00:51:30,418 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-14 00:51:30,418 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:30,418 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:30,425 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-14 00:51:30,430 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-14 00:51:30,430 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-14 00:51:30,435 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-14 00:51:30,440 [ scc.git] DEBUG Already up to date. 2024-10-14 00:51:30,440 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-10-14 00:51:30,852 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-10-14 00:51:30,852 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-10-14 00:51:30,857 [ scc.git] DEBUG ## Unique users: [] 2024-10-14 00:51:30,857 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:30,857 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:30,862 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-10-14 00:51:30,869 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:30,873 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-10-14 00:51:30,902 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:51:30,905 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-10-14 00:51:30,905 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-10-14 00:51:30,906 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-10-14 00:51:30,906 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-10-14 00:51:30,906 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-10-14 00:51:30,906 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-10-14 00:51:30,906 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-10-14 00:51:30,906 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-10-14 00:51:30,906 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-10-14 00:51:30,907 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-10-14 00:51:30,908 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-10-14 00:51:30,908 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-10-14 00:51:30,908 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-10-14 00:51:30,908 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-10-14 00:51:30,908 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-10-14 00:51:30,908 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-10-14 00:51:30,908 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-10-14 00:51:30,908 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-10-14 00:51:30,908 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-10-14 00:51:30,908 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-10-14 00:51:30,908 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-10-14 00:51:30,908 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-10-14 00:51:30,908 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-10-14 00:51:30,908 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-10-14 00:51:30,908 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-10-14 00:51:30,908 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-10-14 00:51:30,908 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-10-14 00:51:30,908 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-10-14 00:51:30,908 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-10-14 00:51:30,908 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-10-14 00:51:30,908 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-10-14 00:51:30,908 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-10-14 00:51:30,909 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-10-14 00:51:30,909 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-10-14 00:51:30,909 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-10-14 00:51:30,909 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-10-14 00:51:30,909 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-10-14 00:51:30,909 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-10-14 00:51:30,909 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-10-14 00:51:30,909 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-10-14 00:51:30,909 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-10-14 00:51:30,909 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-10-14 00:51:30,909 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-10-14 00:51:30,909 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-10-14 00:51:30,909 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-10-14 00:51:31,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:31,035 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-14 00:51:31,075 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:31,075 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:31,080 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:51:31,117 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-14 00:51:31,123 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc46479c5b0> has no local changes 2024-10-14 00:51:31,124 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#211 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/)' 2024-10-14 00:51:31,133 [ scc.git] DEBUG [detached HEAD c79f513] merge master -Dorg -Ssuccess-only 2024-10-14 00:51:31,133 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:51:31,133 [ scc.repo] DEBUG ## PRs found: 2024-10-14 00:51:31,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-10-14 00:51:31,448 [ scc.repo] DEBUG ## Branches found: 2024-10-14 00:51:31,448 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-14 00:51:31,448 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:31,448 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:31,453 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-14 00:51:31,458 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-14 00:51:31,458 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-14 00:51:31,463 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-14 00:51:31,468 [ scc.git] DEBUG Already up to date. 2024-10-14 00:51:31,468 [ scc.git] DEBUG ## Unique users: [] 2024-10-14 00:51:31,468 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:31,468 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:31,474 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-14 00:51:31,517 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:31,517 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:31,524 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:51:31,561 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-14 00:51:31,568 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc4647552e0> has no local changes 2024-10-14 00:51:31,569 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#211 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/)' 2024-10-14 00:51:31,580 [ scc.git] DEBUG [detached HEAD 2248f40] merge master -Dorg -Ssuccess-only 2024-10-14 00:51:31,581 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:51:31,581 [ scc.repo] DEBUG ## PRs found: 2024-10-14 00:51:31,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-10-14 00:51:31,854 [ scc.repo] DEBUG ## Branches found: 2024-10-14 00:51:31,854 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-14 00:51:31,854 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:31,854 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:31,859 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-14 00:51:31,864 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-14 00:51:31,864 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-14 00:51:31,870 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-14 00:51:31,876 [ scc.git] DEBUG Already up to date. 2024-10-14 00:51:31,876 [ scc.git] DEBUG ## Unique users: [] 2024-10-14 00:51:31,876 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:31,876 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:31,881 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-14 00:51:31,918 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:31,918 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:31,923 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:51:31,960 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-14 00:51:31,966 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc4647025b0> has no local changes 2024-10-14 00:51:31,967 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#211 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/)' 2024-10-14 00:51:31,974 [ scc.git] DEBUG [detached HEAD dd35f99] merge master -Dorg -Ssuccess-only 2024-10-14 00:51:31,974 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:51:31,975 [ scc.git] INFO Overriding base-branch from master to main 2024-10-14 00:51:31,975 [ scc.repo] DEBUG ## PRs found: 2024-10-14 00:51:32,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-10-14 00:51:32,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-10-14 00:51:33,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-10-14 00:51:33,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-10-14 00:51:34,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-10-14 00:51:34,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:51:35,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-10-14 00:51:35,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:51:35,462 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-10-14 00:51:35,464 [ scc.repo] DEBUG ## Branches found: 2024-10-14 00:51:35,465 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-14 00:51:35,466 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:35,466 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:35,479 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-10-14 00:51:35,485 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-14 00:51:35,486 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-10-14 00:51:35,493 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-10-14 00:51:35,500 [ scc.git] DEBUG Already up to date. 2024-10-14 00:51:35,500 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-10-14 00:51:35,826 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-10-14 00:51:35,826 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-10-14 00:51:35,830 [ scc.git] DEBUG ## Unique users: [] 2024-10-14 00:51:35,830 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:35,831 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:35,838 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-14 00:51:35,844 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:35,848 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-14 00:51:35,880 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-10-14 00:51:35,880 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-10-14 00:51:35,880 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-14 00:51:35,880 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-14 00:51:35,886 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-10-14 00:51:35,893 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-10-14 00:51:36,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:36,018 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-14 00:51:36,026 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-10-14 00:51:36,033 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#211](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-10-14 00:51:36,038 [ scc.config] DEBUG Found github.token 2024-10-14 00:51:36,039 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-10-14 00:51:36,039 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-14 00:51:36,080 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:36,080 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:36,087 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:51:36,127 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-14 00:51:36,134 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc464726eb0> has no local changes 2024-10-14 00:51:36,134 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#211 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/)' 2024-10-14 00:51:36,144 [ scc.git] DEBUG [detached HEAD 25299f9] merge master -Dorg -Ssuccess-only 2024-10-14 00:51:36,144 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:51:36,144 [ scc.repo] DEBUG ## PRs found: 2024-10-14 00:51:36,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-10-14 00:51:36,445 [ scc.repo] DEBUG ## Branches found: 2024-10-14 00:51:36,445 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-14 00:51:36,445 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:36,445 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:36,453 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-14 00:51:36,460 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-14 00:51:36,460 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-14 00:51:36,467 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-14 00:51:36,474 [ scc.git] DEBUG Already up to date. 2024-10-14 00:51:36,474 [ scc.git] DEBUG ## Unique users: [] 2024-10-14 00:51:36,475 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:36,475 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:36,481 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-14 00:51:36,524 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:36,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:36,530 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:51:36,571 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-14 00:51:36,577 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc4647027f0> has no local changes 2024-10-14 00:51:36,577 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#211 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/)' 2024-10-14 00:51:36,585 [ scc.git] DEBUG [detached HEAD 8d8936a] merge master -Dorg -Ssuccess-only 2024-10-14 00:51:36,585 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:51:36,586 [ scc.repo] DEBUG ## PRs found: 2024-10-14 00:51:36,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-10-14 00:51:36,854 [ scc.repo] DEBUG ## Branches found: 2024-10-14 00:51:36,854 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-14 00:51:36,854 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:36,854 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:36,861 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-14 00:51:36,866 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-14 00:51:36,866 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-14 00:51:36,871 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-14 00:51:36,877 [ scc.git] DEBUG Already up to date. 2024-10-14 00:51:36,878 [ scc.git] DEBUG ## Unique users: [] 2024-10-14 00:51:36,878 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:36,878 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:36,883 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-14 00:51:36,925 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:36,926 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:36,932 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:51:36,974 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-14 00:51:36,982 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc464720b80> has no local changes 2024-10-14 00:51:36,982 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#211 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/)' 2024-10-14 00:51:36,992 [ scc.git] DEBUG [detached HEAD 0970601] merge master -Dorg -Ssuccess-only 2024-10-14 00:51:36,993 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:51:36,993 [ scc.repo] DEBUG ## PRs found: 2024-10-14 00:51:37,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-10-14 00:51:37,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-10-14 00:51:38,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-10-14 00:51:38,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-10-14 00:51:39,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:51:39,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-10-14 00:51:40,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:51:40,056 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-10-14 00:51:40,056 [ scc.repo] DEBUG ## Branches found: 2024-10-14 00:51:40,057 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-14 00:51:40,057 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:40,057 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:40,063 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-14 00:51:40,068 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-14 00:51:40,068 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-14 00:51:40,074 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-14 00:51:40,081 [ scc.git] DEBUG Already up to date. 2024-10-14 00:51:40,081 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-10-14 00:51:40,422 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-10-14 00:51:40,422 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-10-14 00:51:40,427 [ scc.git] DEBUG ## Unique users: [] 2024-10-14 00:51:40,427 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:40,427 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:40,434 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-14 00:51:40,440 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:40,446 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-14 00:51:40,484 [ scc.git] DEBUG Auto-merging Dockerfile 2024-10-14 00:51:40,484 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-10-14 00:51:40,484 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-14 00:51:40,485 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-14 00:51:40,492 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-10-14 00:51:40,501 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-10-14 00:51:40,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:40,630 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-14 00:51:40,636 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-10-14 00:51:40,642 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#211](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-10-14 00:51:40,647 [ scc.config] DEBUG Found github.token 2024-10-14 00:51:40,647 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-10-14 00:51:40,648 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-14 00:51:40,687 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:40,687 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:40,693 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:51:40,731 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-14 00:51:40,738 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc46471bdf0> has no local changes 2024-10-14 00:51:40,738 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#211 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/)' 2024-10-14 00:51:40,747 [ scc.git] DEBUG [detached HEAD a8b66cd] merge master -Dorg -Ssuccess-only 2024-10-14 00:51:40,747 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:51:40,747 [ scc.git] INFO Overriding base-branch from master to develop 2024-10-14 00:51:40,747 [ scc.repo] DEBUG ## PRs found: 2024-10-14 00:51:41,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-10-14 00:51:41,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-10-14 00:51:42,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2024-10-14 00:51:42,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-10-14 00:51:43,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:51:43,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-14 00:51:43,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-10-14 00:51:44,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:51:44,319 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-10-14 00:51:44,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-10-14 00:51:45,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-10-14 00:51:45,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-10-14 00:51:46,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-10-14 00:51:46,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-10-14 00:51:47,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-10-14 00:51:47,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-10-14 00:51:47,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-14 00:51:48,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-10-14 00:51:48,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-10-14 00:51:48,640 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-10-14 00:51:49,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-10-14 00:51:49,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-10-14 00:51:50,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-10-14 00:51:50,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-10-14 00:51:50,503 [ scc.repo] DEBUG ## Branches found: 2024-10-14 00:51:50,503 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-14 00:51:50,503 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:50,503 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:50,510 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-10-14 00:51:50,517 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-14 00:51:50,518 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-10-14 00:51:50,524 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-10-14 00:51:50,532 [ scc.git] DEBUG Already up to date. 2024-10-14 00:51:50,532 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-10-14 00:51:51,126 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-10-14 00:51:51,127 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-10-14 00:51:51,132 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-10-14 00:51:51,693 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-10-14 00:51:51,694 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-10-14 00:51:51,698 [ scc.git] DEBUG ## Unique users: [] 2024-10-14 00:51:51,698 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:51,699 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:51,706 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-14 00:51:51,713 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:51,719 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-14 00:51:51,830 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-10-14 00:51:51,831 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-10-14 00:51:51,831 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-14 00:51:51,831 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-14 00:51:51,837 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-10-14 00:51:51,844 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-10-14 00:51:51,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:51,970 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-14 00:51:51,978 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-10-14 00:51:51,984 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#211](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-10-14 00:51:51,990 [ scc.config] DEBUG Found github.token 2024-10-14 00:51:51,990 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-10-14 00:51:51,990 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-10-14 00:51:51,996 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:52,003 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-10-14 00:51:52,026 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-14 00:51:52,029 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-10-14 00:51:52,029 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-10-14 00:51:52,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:52,346 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-14 00:51:52,388 [ scc.git] DEBUG Get sha1 of %s 2024-10-14 00:51:52,388 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-14 00:51:52,395 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:51:52,435 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-14 00:51:52,442 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc4646e0490> has no local changes 2024-10-14 00:51:52,442 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#211 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/)' 2024-10-14 00:51:52,452 [ scc.git] DEBUG [detached HEAD 69a92b0] merge master -Dorg -Ssuccess-only 2024-10-14 00:51:52,453 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:51:52,453 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-14 00:51:52,533 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-10-14 00:51:52,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:52,733 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-10-14 00:51:52,738 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-10-14 00:51:53,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:53,120 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-10-14 00:51:53,125 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-10-14 00:51:53,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:53,505 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-10-14 00:51:53,510 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-10-14 00:51:53,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:53,892 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-10-14 00:51:54,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:54,265 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-10-14 00:51:54,272 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-10-14 00:51:54,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:54,658 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-10-14 00:51:54,663 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-10-14 00:51:55,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:55,040 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-10-14 00:51:55,045 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-10-14 00:51:55,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:55,425 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-10-14 00:51:55,431 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-10-14 00:51:55,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:55,820 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-10-14 00:51:55,826 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-10-14 00:51:56,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:56,208 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-10-14 00:51:56,214 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-10-14 00:51:56,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:56,585 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-10-14 00:51:56,592 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-10-14 00:51:56,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:56,970 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-10-14 00:51:56,976 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-10-14 00:51:57,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:57,374 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-10-14 00:51:57,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:57,744 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-10-14 00:51:58,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:58,122 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-10-14 00:51:58,127 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-10-14 00:51:58,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:58,511 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-10-14 00:51:58,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:58,876 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-10-14 00:51:59,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:59,307 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-10-14 00:51:59,316 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-10-14 00:51:59,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:51:59,681 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-10-14 00:51:59,685 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-10-14 00:52:00,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:52:00,093 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-10-14 00:52:00,098 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-10-14 00:52:00,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:52:00,474 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-10-14 00:52:00,482 [ scc.config] DEBUG Found submodule.scripts.url 2024-10-14 00:52:00,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-14 00:52:00,862 [ scc.config] DEBUG Found submodule.scripts.branch 2024-10-14 00:52:00,863 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-14 00:52:00,947 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc4683488b0> has local changes 2024-10-14 00:52:00,948 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) - PR 596 Tom-TBT 'Dynamic lut for figure' (user: Tom-TBT) - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 577 Rdornier 'Fill rois' - PR 578 Rdornier 'Image outline' - PR 584 Rdornier 'Link url to image' - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 595 Rdornier 'Rotate image panel by 90°' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 486 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) - PR 485 Tom-TBT 'Dynamic LUT for iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' - PR 484 barrettMCW 'improved mirroring' Repository: ome/omero-mapr Excluded PRs: - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#211 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/211/)' 2024-10-14 00:52:00,964 [ scc.git] DEBUG [detached HEAD 9b4e33b] merge master -Dorg -Ssuccess-only 2024-10-14 00:52:00,964 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-10-14 00:52:00,965 [ scc.merge] INFO Repository: ome/omero-plugins 2024-10-14 00:52:00,965 [ scc.merge] INFO Already up to date. 2024-10-14 00:52:00,965 [ scc.merge] INFO 2024-10-14 00:52:00,965 [ scc.merge] INFO Merged PRs: 2024-10-14 00:52:00,965 [ scc.merge] INFO - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' 2024-10-14 00:52:00,965 [ scc.merge] INFO 2024-10-14 00:52:00,965 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-10-14 00:52:00,965 [ scc.merge] INFO Already up to date. 2024-10-14 00:52:00,965 [ scc.merge] INFO 2024-10-14 00:52:00,965 [ scc.merge] INFO Merged PRs: 2024-10-14 00:52:00,965 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2' 2024-10-14 00:52:00,965 [ scc.merge] INFO 2024-10-14 00:52:00,965 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-10-14 00:52:00,965 [ scc.merge] INFO Excluded PRs: 2024-10-14 00:52:00,965 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-10-14 00:52:00,966 [ scc.merge] INFO Already up to date. 2024-10-14 00:52:00,966 [ scc.merge] INFO 2024-10-14 00:52:00,966 [ scc.merge] INFO Merged PRs: 2024-10-14 00:52:00,966 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-10-14 00:52:00,966 [ scc.merge] INFO 2024-10-14 00:52:00,966 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-10-14 00:52:00,966 [ scc.merge] INFO Excluded PRs: 2024-10-14 00:52:00,966 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-10-14 00:52:00,966 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-10-14 00:52:00,966 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-10-14 00:52:00,966 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-10-14 00:52:00,966 [ scc.merge] INFO Already up to date. 2024-10-14 00:52:00,966 [ scc.merge] INFO 2024-10-14 00:52:00,966 [ scc.merge] INFO Merged PRs: 2024-10-14 00:52:00,966 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-10-14 00:52:00,966 [ scc.merge] INFO 2024-10-14 00:52:00,966 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-10-14 00:52:00,966 [ scc.merge] INFO Excluded PRs: 2024-10-14 00:52:00,966 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-10-14 00:52:00,966 [ scc.merge] INFO Already up to date. 2024-10-14 00:52:00,966 [ scc.merge] INFO 2024-10-14 00:52:00,966 [ scc.merge] INFO Merged PRs: 2024-10-14 00:52:00,966 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-10-14 00:52:00,967 [ scc.merge] INFO 2024-10-14 00:52:00,967 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-14 00:52:00,967 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-10-14 00:52:00,967 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-10-14 00:52:00,967 [ scc.merge] INFO 2024-10-14 00:52:00,967 [ scc.merge] INFO Repository: ome/omero-figure 2024-10-14 00:52:00,967 [ scc.merge] INFO Excluded PRs: 2024-10-14 00:52:00,967 [ scc.merge] INFO - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) 2024-10-14 00:52:00,967 [ scc.merge] INFO - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) 2024-10-14 00:52:00,967 [ scc.merge] INFO - PR 596 Tom-TBT 'Dynamic lut for figure' (user: Tom-TBT) 2024-10-14 00:52:00,967 [ scc.merge] INFO - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) 2024-10-14 00:52:00,967 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-10-14 00:52:00,967 [ scc.merge] INFO Already up to date. 2024-10-14 00:52:00,967 [ scc.merge] INFO 2024-10-14 00:52:00,967 [ scc.merge] INFO Merged PRs: 2024-10-14 00:52:00,967 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' 2024-10-14 00:52:00,967 [ scc.merge] INFO - PR 578 Rdornier 'Image outline' 2024-10-14 00:52:00,967 [ scc.merge] INFO - PR 584 Rdornier 'Link url to image' 2024-10-14 00:52:00,967 [ scc.merge] INFO - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-10-14 00:52:00,967 [ scc.merge] INFO - PR 595 Rdornier 'Rotate image panel by 90°' 2024-10-14 00:52:00,967 [ scc.merge] INFO 2024-10-14 00:52:00,967 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-10-14 00:52:00,967 [ scc.merge] INFO Already up to date. 2024-10-14 00:52:00,967 [ scc.merge] INFO 2024-10-14 00:52:00,968 [ scc.merge] INFO Merged PRs: 2024-10-14 00:52:00,968 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-10-14 00:52:00,968 [ scc.merge] INFO 2024-10-14 00:52:00,968 [ scc.merge] INFO Repository: ome/omero-gallery 2024-10-14 00:52:00,968 [ scc.merge] INFO Already up to date. 2024-10-14 00:52:00,968 [ scc.merge] INFO 2024-10-14 00:52:00,968 [ scc.merge] INFO Merged PRs: 2024-10-14 00:52:00,968 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-10-14 00:52:00,968 [ scc.merge] INFO 2024-10-14 00:52:00,968 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-10-14 00:52:00,968 [ scc.merge] INFO Excluded PRs: 2024-10-14 00:52:00,968 [ scc.merge] INFO - PR 486 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) 2024-10-14 00:52:00,968 [ scc.merge] INFO - PR 485 Tom-TBT 'Dynamic LUT for iviewer' (user: Tom-TBT) 2024-10-14 00:52:00,968 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-10-14 00:52:00,968 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-10-14 00:52:00,968 [ scc.merge] INFO Already up to date. 2024-10-14 00:52:00,968 [ scc.merge] INFO 2024-10-14 00:52:00,968 [ scc.merge] INFO Merged PRs: 2024-10-14 00:52:00,968 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-10-14 00:52:00,968 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-10-14 00:52:00,968 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-10-14 00:52:00,968 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-10-14 00:52:00,968 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-10-14 00:52:00,968 [ scc.merge] INFO - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-10-14 00:52:00,969 [ scc.merge] INFO - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-10-14 00:52:00,969 [ scc.merge] INFO - PR 484 barrettMCW 'improved mirroring' 2024-10-14 00:52:00,969 [ scc.merge] INFO 2024-10-14 00:52:00,969 [ scc.merge] INFO Repository: ome/omero-mapr 2024-10-14 00:52:00,969 [ scc.merge] INFO Excluded PRs: 2024-10-14 00:52:00,969 [ scc.merge] INFO - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) 2024-10-14 00:52:00,969 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-10-14 00:52:00,969 [ scc.merge] INFO Already up to date. 2024-10-14 00:52:00,969 [ scc.merge] INFO 2024-10-14 00:52:00,969 [ scc.merge] INFO Merged PRs: 2024-10-14 00:52:00,969 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-10-14 00:52:00,969 [ scc.merge] INFO 2024-10-14 00:52:00,969 [ scc.merge] INFO Repository: ome/omero-metadata 2024-10-14 00:52:00,969 [ scc.merge] INFO Already up to date. 2024-10-14 00:52:00,969 [ scc.merge] INFO 2024-10-14 00:52:00,969 [ scc.merge] INFO Merged PRs: 2024-10-14 00:52:00,969 [ scc.merge] INFO - PR 86 dominikl 'Add tablename option' 2024-10-14 00:52:00,969 [ scc.merge] INFO 2024-10-14 00:52:00,969 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-14 00:52:00,969 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-10-14 00:52:00,969 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-10-14 00:52:00,969 [ scc.merge] INFO 2024-10-14 00:52:00,969 [ scc.merge] INFO Repository: ome/omero-parade 2024-10-14 00:52:00,969 [ scc.merge] INFO Excluded PRs: 2024-10-14 00:52:00,970 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-10-14 00:52:00,970 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-10-14 00:52:00,970 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-10-14 00:52:00,970 [ scc.merge] INFO Already up to date. 2024-10-14 00:52:00,970 [ scc.merge] INFO 2024-10-14 00:52:00,970 [ scc.merge] INFO Merged PRs: 2024-10-14 00:52:00,970 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-10-14 00:52:00,970 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-10-14 00:52:00,970 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-10-14 00:52:00,970 [ scc.merge] INFO 2024-10-14 00:52:00,970 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-10-14 00:52:00,970 [ scc.merge] INFO Already up to date. 2024-10-14 00:52:00,970 [ scc.merge] INFO 2024-10-14 00:52:00,970 [ scc.merge] INFO Merged PRs: 2024-10-14 00:52:00,970 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-10-14 00:52:00,970 [ scc.merge] INFO 2024-10-14 00:52:00,970 [ scc.merge] INFO Repository: ome/omero-rois 2024-10-14 00:52:00,970 [ scc.merge] INFO Excluded PRs: 2024-10-14 00:52:00,970 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-10-14 00:52:00,970 [ scc.merge] INFO Already up to date. 2024-10-14 00:52:00,970 [ scc.merge] INFO 2024-10-14 00:52:00,970 [ scc.merge] INFO Merged PRs: 2024-10-14 00:52:00,970 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-10-14 00:52:00,970 [ scc.merge] INFO 2024-10-14 00:52:00,970 [ scc.merge] INFO Repository: ome/omero-signup 2024-10-14 00:52:00,971 [ scc.merge] INFO Already up to date. 2024-10-14 00:52:00,971 [ scc.merge] INFO 2024-10-14 00:52:00,971 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-14 00:52:00,971 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-10-14 00:52:00,971 [ scc.merge] INFO 2024-10-14 00:52:00,971 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-10-14 00:52:00,971 [ scc.merge] INFO Already up to date. 2024-10-14 00:52:00,971 [ scc.merge] INFO 2024-10-14 00:52:00,971 [ scc.merge] INFO Merged PRs: 2024-10-14 00:52:00,971 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-10-14 00:52:00,971 [ scc.merge] INFO 2024-10-14 00:52:00,971 [ scc.merge] INFO Repository: ome/omero-upload 2024-10-14 00:52:00,971 [ scc.merge] INFO Already up to date. 2024-10-14 00:52:00,971 [ scc.merge] INFO 2024-10-14 00:52:00,971 [ scc.merge] INFO 2024-10-14 00:52:00,971 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-10-14 00:52:00,971 [ scc.merge] INFO Already up to date. 2024-10-14 00:52:00,971 [ scc.merge] INFO 2024-10-14 00:52:00,971 [ scc.merge] INFO 2024-10-14 00:52:00,971 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-10-14 00:52:00,971 [ scc.merge] INFO Excluded PRs: 2024-10-14 00:52:00,971 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-10-14 00:52:00,971 [ scc.merge] INFO Already up to date. 2024-10-14 00:52:00,971 [ scc.merge] INFO 2024-10-14 00:52:00,971 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-14 00:52:00,971 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-10-14 00:52:00,971 [ scc.merge] INFO 2024-10-14 00:52:00,971 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-10-14 00:52:00,971 [ scc.merge] INFO Already up to date. 2024-10-14 00:52:00,971 [ scc.merge] INFO 2024-10-14 00:52:00,971 [ scc.merge] INFO 2024-10-14 00:52:00,971 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-10-14 00:52:00,971 [ scc.merge] INFO Already up to date. 2024-10-14 00:52:00,971 [ scc.merge] INFO 2024-10-14 00:52:00,971 [ scc.merge] INFO 2024-10-14 00:52:00,971 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-10-14 00:52:00,972 [ scc.merge] INFO Already up to date. 2024-10-14 00:52:00,972 [ scc.merge] INFO 2024-10-14 00:52:00,972 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-14 00:52:00,972 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-10-14 00:52:00,972 [ scc.merge] INFO 2024-10-14 00:52:00,972 [ scc.merge] INFO Repository: ome/scripts 2024-10-14 00:52:00,972 [ scc.merge] INFO Excluded PRs: 2024-10-14 00:52:00,972 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-10-14 00:52:00,972 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-10-14 00:52:00,972 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-10-14 00:52:00,972 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-10-14 00:52:00,972 [ scc.merge] INFO Already up to date. 2024-10-14 00:52:00,972 [ scc.merge] INFO 2024-10-14 00:52:00,972 [ scc.merge] INFO Merged PRs: 2024-10-14 00:52:00,972 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-10-14 00:52:00,972 [ scc.merge] INFO 2024-10-14 00:52:00,972 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-14 00:52:00,972 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-10-14 00:52:00,972 [ scc.merge] INFO 2024-10-14 00:52:00,972 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-10-14 00:52:00,972 [ scc.git] DEBUG Calling 'git remote' 2024-10-14 00:52:00,979 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-14 00:52:00,979 [ scc.git] DEBUG Calling 'git remote' 2024-10-14 00:52:00,984 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:52:00,985 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-14 00:52:00,985 [ scc.git] DEBUG Calling 'git remote' 2024-10-14 00:52:00,990 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:52:00,990 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-14 00:52:00,990 [ scc.git] DEBUG Calling 'git remote' 2024-10-14 00:52:00,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:52:00,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-14 00:52:00,995 [ scc.git] DEBUG Calling 'git remote' 2024-10-14 00:52:01,001 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:52:01,001 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-14 00:52:01,001 [ scc.git] DEBUG Calling 'git remote' 2024-10-14 00:52:01,007 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:52:01,007 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-14 00:52:01,007 [ scc.git] DEBUG Calling 'git remote' 2024-10-14 00:52:01,013 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:52:01,013 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-14 00:52:01,013 [ scc.git] DEBUG Calling 'git remote' 2024-10-14 00:52:01,021 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:52:01,021 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-14 00:52:01,021 [ scc.git] DEBUG Calling 'git remote' 2024-10-14 00:52:01,029 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:52:01,030 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-14 00:52:01,030 [ scc.git] DEBUG Calling 'git remote' 2024-10-14 00:52:01,036 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:52:01,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-14 00:52:01,037 [ scc.git] DEBUG Calling 'git remote' 2024-10-14 00:52:01,045 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:52:01,045 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-14 00:52:01,045 [ scc.git] DEBUG Calling 'git remote' 2024-10-14 00:52:01,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:52:01,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-14 00:52:01,052 [ scc.git] DEBUG Calling 'git remote' 2024-10-14 00:52:01,060 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:52:01,060 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-14 00:52:01,060 [ scc.git] DEBUG Calling 'git remote' 2024-10-14 00:52:01,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:52:01,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-14 00:52:01,067 [ scc.git] DEBUG Calling 'git remote' 2024-10-14 00:52:01,074 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:52:01,074 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-14 00:52:01,074 [ scc.git] DEBUG Calling 'git remote' 2024-10-14 00:52:01,079 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:52:01,080 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-14 00:52:01,080 [ scc.git] DEBUG Calling 'git remote' 2024-10-14 00:52:01,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:52:01,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-14 00:52:01,087 [ scc.git] DEBUG Calling 'git remote' 2024-10-14 00:52:01,093 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:52:01,094 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-14 00:52:01,094 [ scc.git] DEBUG Calling 'git remote' 2024-10-14 00:52:01,100 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:52:01,100 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-14 00:52:01,100 [ scc.git] DEBUG Calling 'git remote' 2024-10-14 00:52:01,107 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:52:01,107 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-14 00:52:01,107 [ scc.git] DEBUG Calling 'git remote' 2024-10-14 00:52:01,113 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:52:01,113 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-14 00:52:01,113 [ scc.git] DEBUG Calling 'git remote' 2024-10-14 00:52:01,119 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-14 00:52:01,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-14 00:52:01,120 [ scc.git] DEBUG Calling 'git remote' 2024-10-14 00:52:01,125 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.2 to 5.9.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD aaa9064] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 173cac0 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 1c0e5f95 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD 8dc44fc] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-14 00:52:49,096 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-14 00:52:57,741 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-14 00:53:00,005 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-14 00:53:04,450 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-14 00:53:44,139 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS