![[Jenkins]](/jenkins/static/4f42acd4/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 248 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Commit message: "Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399" > git rev-list --no-walk b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 214 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.4.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (34 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.4.0-py3-none-any.whl (362 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (144 kB) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.4.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.4.0 cryptography-43.0.1 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-10-15 00:51:12,615 [ scc.config] DEBUG Found github.token 2024-10-15 00:51:12,617 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-10-15 00:51:12,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:51:13,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:51:13,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-10-15 00:51:13,563 [ scc.gh] DEBUG 3640 remaining from 5000 (Reset at 00:10 2024-10-15 00:51:13,564 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-15 00:51:13,569 [ scc.git] DEBUG Check current status 2024-10-15 00:51:13,569 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-15 00:51:13,572 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-15 00:51:13,572 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-15 00:51:13,614 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-15 00:51:13,616 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-15 00:51:13,619 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-15 00:51:13,622 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-15 00:51:13,627 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-10-15 00:51:13,630 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-15 00:51:13,632 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-15 00:51:13,648 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-15 00:51:13,652 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-15 00:51:13,654 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-15 00:51:13,657 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-15 00:51:13,659 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-15 00:51:13,662 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-15 00:51:13,665 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-15 00:51:13,712 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-15 00:51:13,715 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-15 00:51:13,718 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-15 00:51:13,720 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-15 00:51:13,722 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-15 00:51:13,725 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-15 00:51:13,727 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-15 00:51:13,731 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-15 00:51:13,735 [ scc.config] DEBUG Found remote.origin.url 2024-10-15 00:51:14,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-10-15 00:51:14,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-15 00:51:14,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-15 00:51:15,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-15 00:51:15,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-15 00:51:15,740 [ scc.git] DEBUG Resetting... 2024-10-15 00:51:15,740 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-10-15 00:51:15,749 [ scc.git] DEBUG HEAD is now at b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-15 00:51:15,749 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-10-15 00:51:15,850 [ scc.git] DEBUG Check current status 2024-10-15 00:51:15,850 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-15 00:51:15,854 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-15 00:51:15,854 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-15 00:51:15,897 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-15 00:51:15,900 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-15 00:51:15,903 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-15 00:51:15,906 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-15 00:51:15,910 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-10-15 00:51:15,912 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-15 00:51:15,916 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-15 00:51:15,922 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-15 00:51:15,927 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-15 00:51:15,930 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-15 00:51:15,933 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-15 00:51:15,936 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-15 00:51:15,939 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-15 00:51:15,941 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-15 00:51:15,944 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-15 00:51:15,947 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-15 00:51:15,949 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-15 00:51:15,951 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-15 00:51:15,954 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-15 00:51:15,956 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-15 00:51:15,959 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-15 00:51:15,962 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-15 00:51:15,963 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-10-15 00:51:15,963 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-10-15 00:51:15,963 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-10-15 00:51:15,963 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-10-15 00:51:15,963 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-10-15 00:51:15,963 [ scc.repo] DEBUG ## PRs found: 2024-10-15 00:51:16,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-10-15 00:51:16,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/393 HTTP/1.1" 200 None 2024-10-15 00:51:16,676 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-15 00:51:16,676 [ scc.repo] DEBUG - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' 2024-10-15 00:51:16,676 [ scc.repo] DEBUG ## Branches found: 2024-10-15 00:51:16,676 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:51:16,676 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:51:16,681 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-15 00:51:16,685 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-15 00:51:16,685 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-15 00:51:16,689 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-15 00:51:16,695 [ scc.git] DEBUG Already up to date. 2024-10-15 00:51:16,695 [ scc.git] DEBUG Calling 'git fetch origin pull/393/head' 2024-10-15 00:51:17,037 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-10-15 00:51:17,037 [ scc.git] DEBUG * branch refs/pull/393/head -> FETCH_HEAD 2024-10-15 00:51:17,042 [ scc.git] DEBUG ## Unique users: [] 2024-10-15 00:51:17,042 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:51:17,042 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:51:17,046 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d' 2024-10-15 00:51:17,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:51:17,118 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 393 (Bump omero-figure from `5f62399` to `1c0e5f9`) 8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d' 2024-10-15 00:51:17,134 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:51:17,136 [ scc.git] DEBUG omero-figure | 2 +- 2024-10-15 00:51:17,136 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-10-15 00:51:17,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:51:17,273 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-15 00:51:17,342 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1' 2024-10-15 00:51:17,343 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:51:17,343 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:51:17,346 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-15 00:51:19,257 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f83bc8f0fd0> has no local changes 2024-10-15 00:51:19,257 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' Generated by OMERO-plugins-push#212 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/)' 2024-10-15 00:51:19,328 [ scc.git] DEBUG [detached HEAD 67811ec] merge master -Dorg -Snone 2024-10-15 00:51:19,329 [ scc.merge] INFO Repository: ome/omero-plugins 2024-10-15 00:51:19,329 [ scc.merge] INFO Already up to date. 2024-10-15 00:51:19,329 [ scc.merge] INFO 2024-10-15 00:51:19,329 [ scc.merge] INFO Merged PRs: 2024-10-15 00:51:19,329 [ scc.merge] INFO - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' 2024-10-15 00:51:19,329 [ scc.merge] INFO 2024-10-15 00:51:19,329 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-10-15 00:51:19,329 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' From https://github.com/ome/omero-cli-zarr + 76697b3...ff61440 pre-commit-ci-update-config -> origin/pre-commit-ci-update-config (forced update) Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-10-15 00:51:27,611 [ scc.config] DEBUG Found github.token 2024-10-15 00:51:27,614 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-10-15 00:51:27,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:51:28,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:51:28,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-10-15 00:51:28,550 [ scc.gh] DEBUG 3630 remaining from 5000 (Reset at 00:10 2024-10-15 00:51:28,551 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-15 00:51:28,555 [ scc.git] DEBUG Check current status 2024-10-15 00:51:28,556 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-15 00:51:28,559 [ scc.git] DEBUG 67811ec merge master -Dorg -Snone 2024-10-15 00:51:28,559 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-15 00:51:28,602 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-15 00:51:28,605 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-15 00:51:28,607 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-15 00:51:28,610 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-15 00:51:30,696 [ scc.git] DEBUG 1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1 omero-figure (v7.1.0-65-g1c0e5f95) 2024-10-15 00:51:30,699 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-15 00:51:30,702 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-15 00:51:30,705 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-15 00:51:30,708 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-15 00:51:30,711 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-15 00:51:30,714 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-15 00:51:30,716 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-15 00:51:30,719 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-15 00:51:30,722 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-15 00:51:30,725 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-15 00:51:30,728 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-15 00:51:30,731 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-15 00:51:30,733 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-15 00:51:30,735 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-15 00:51:30,738 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-15 00:51:30,741 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-15 00:51:30,744 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-15 00:51:30,748 [ scc.config] DEBUG Found remote.origin.url 2024-10-15 00:51:30,748 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-10-15 00:51:30,750 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-10-15 00:51:30,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-10-15 00:51:31,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-15 00:51:31,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-15 00:51:32,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-15 00:51:32,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-15 00:51:32,668 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:51:32,733 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-15 00:51:32,733 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-15 00:51:32,737 [ scc.git] DEBUG Check current status 2024-10-15 00:51:32,737 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-15 00:51:32,741 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-10-15 00:51:32,741 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-15 00:51:32,781 [ scc.config] DEBUG Found remote.origin.url 2024-10-15 00:51:33,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-10-15 00:51:33,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-15 00:51:33,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-15 00:51:34,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-15 00:51:34,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-15 00:51:34,750 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:51:34,787 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:51:34,788 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-15 00:51:34,788 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-15 00:51:34,791 [ scc.git] DEBUG Check current status 2024-10-15 00:51:34,791 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-15 00:51:34,795 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-10-15 00:51:34,795 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-15 00:51:34,834 [ scc.config] DEBUG Found remote.origin.url 2024-10-15 00:51:35,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-10-15 00:51:35,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-15 00:51:36,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-15 00:51:36,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-15 00:51:36,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-15 00:51:36,923 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:51:36,961 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:51:36,962 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-15 00:51:36,962 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-15 00:51:36,966 [ scc.git] DEBUG Check current status 2024-10-15 00:51:36,966 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-15 00:51:36,969 [ scc.git] DEBUG 173cac0 Bump version: 0.8.1 → 0.8.2.dev0 2024-10-15 00:51:36,969 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-15 00:51:37,009 [ scc.config] DEBUG Found remote.origin.url 2024-10-15 00:51:37,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-10-15 00:51:37,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-15 00:51:38,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-15 00:51:38,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-15 00:51:39,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-15 00:51:39,061 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:51:39,098 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:51:39,099 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-15 00:51:39,099 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-15 00:51:39,102 [ scc.git] DEBUG Check current status 2024-10-15 00:51:39,102 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-15 00:51:39,106 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-15 00:51:39,106 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-15 00:51:39,146 [ scc.config] DEBUG Found remote.origin.url 2024-10-15 00:51:39,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-10-15 00:51:39,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-15 00:51:40,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-15 00:51:40,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-15 00:51:41,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-15 00:51:41,208 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:51:41,247 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:51:41,248 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-15 00:51:41,248 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-15 00:51:41,252 [ scc.git] DEBUG Check current status 2024-10-15 00:51:41,252 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-15 00:51:41,261 [ scc.git] DEBUG 1c0e5f95 Merge pull request #555 from will-moore/points_in_shapeEditor 2024-10-15 00:51:41,262 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-15 00:51:41,303 [ scc.config] DEBUG Found remote.origin.url 2024-10-15 00:51:41,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-10-15 00:51:42,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-15 00:51:42,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-15 00:51:42,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-15 00:51:43,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-15 00:51:43,347 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:51:43,385 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:51:43,386 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-15 00:51:43,386 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-15 00:51:43,390 [ scc.git] DEBUG Check current status 2024-10-15 00:51:43,391 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-15 00:51:43,395 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-10-15 00:51:43,395 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-15 00:51:43,435 [ scc.config] DEBUG Found remote.origin.url 2024-10-15 00:51:43,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-10-15 00:51:44,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-15 00:51:44,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-15 00:51:45,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-15 00:51:45,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-15 00:51:45,438 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:51:45,475 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:51:45,476 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-15 00:51:45,476 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-15 00:51:45,480 [ scc.git] DEBUG Check current status 2024-10-15 00:51:45,480 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-15 00:51:45,484 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-10-15 00:51:45,484 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-15 00:51:45,523 [ scc.config] DEBUG Found remote.origin.url 2024-10-15 00:51:45,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-10-15 00:51:46,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-15 00:51:46,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-15 00:51:47,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-15 00:51:47,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-15 00:51:47,561 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:51:47,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:51:47,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-15 00:51:47,600 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-15 00:51:47,603 [ scc.git] DEBUG Check current status 2024-10-15 00:51:47,603 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-15 00:51:47,607 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-10-15 00:51:47,607 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-15 00:51:47,647 [ scc.config] DEBUG Found remote.origin.url 2024-10-15 00:51:48,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-10-15 00:51:48,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-15 00:51:48,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-15 00:51:49,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-15 00:51:49,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-15 00:51:49,659 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:51:49,696 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:51:49,697 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-15 00:51:49,697 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-15 00:51:49,701 [ scc.git] DEBUG Check current status 2024-10-15 00:51:49,701 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-15 00:51:49,704 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-10-15 00:51:49,705 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-15 00:51:49,743 [ scc.config] DEBUG Found remote.origin.url 2024-10-15 00:51:50,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-10-15 00:51:50,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-15 00:51:51,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-15 00:51:51,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-15 00:51:51,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-15 00:51:51,799 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:51:51,834 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:51:51,835 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-15 00:51:51,835 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-15 00:51:51,839 [ scc.git] DEBUG Check current status 2024-10-15 00:51:51,839 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-15 00:51:51,842 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-15 00:51:51,843 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-15 00:51:51,880 [ scc.config] DEBUG Found remote.origin.url 2024-10-15 00:51:52,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-10-15 00:51:52,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-15 00:51:53,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-15 00:51:53,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-15 00:51:53,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-15 00:51:53,904 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:51:53,939 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:51:53,940 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-15 00:51:53,940 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-15 00:51:53,943 [ scc.git] DEBUG Check current status 2024-10-15 00:51:53,943 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-15 00:51:53,947 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-10-15 00:51:53,947 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-15 00:51:53,984 [ scc.config] DEBUG Found remote.origin.url 2024-10-15 00:51:54,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-10-15 00:51:54,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-15 00:51:55,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-15 00:51:55,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-15 00:51:56,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-15 00:51:56,017 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:51:56,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:51:56,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-15 00:51:56,055 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-15 00:51:56,059 [ scc.git] DEBUG Check current status 2024-10-15 00:51:56,059 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-15 00:51:56,063 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-10-15 00:51:56,063 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-15 00:51:56,101 [ scc.config] DEBUG Found remote.origin.url 2024-10-15 00:51:56,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-10-15 00:51:56,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-15 00:51:57,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-15 00:51:57,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-15 00:51:58,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-15 00:51:58,130 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:51:58,167 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:51:58,168 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-15 00:51:58,168 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-15 00:51:58,172 [ scc.git] DEBUG Check current status 2024-10-15 00:51:58,172 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-15 00:51:58,177 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-10-15 00:51:58,177 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-15 00:51:58,218 [ scc.config] DEBUG Found remote.origin.url 2024-10-15 00:51:58,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-10-15 00:51:59,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-15 00:51:59,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-15 00:52:00,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-15 00:52:00,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-15 00:52:00,428 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:52:00,464 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:52:00,465 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-15 00:52:00,465 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-15 00:52:00,469 [ scc.git] DEBUG Check current status 2024-10-15 00:52:00,469 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-15 00:52:00,473 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-10-15 00:52:00,473 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-15 00:52:00,511 [ scc.config] DEBUG Found remote.origin.url 2024-10-15 00:52:00,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-10-15 00:52:01,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-15 00:52:01,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-15 00:52:02,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-15 00:52:02,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-15 00:52:02,541 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:52:02,580 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:52:02,581 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-15 00:52:02,581 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-15 00:52:02,586 [ scc.git] DEBUG Check current status 2024-10-15 00:52:02,586 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-15 00:52:02,590 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-10-15 00:52:02,590 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-15 00:52:02,632 [ scc.config] DEBUG Found remote.origin.url 2024-10-15 00:52:02,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-15 00:52:02,952 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-15 00:52:03,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-10-15 00:52:03,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-15 00:52:04,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-15 00:52:04,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-15 00:52:04,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-15 00:52:04,808 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:52:04,845 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:52:04,846 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-15 00:52:04,846 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-15 00:52:04,850 [ scc.git] DEBUG Check current status 2024-10-15 00:52:04,851 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-15 00:52:04,854 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-10-15 00:52:04,855 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-15 00:52:04,893 [ scc.config] DEBUG Found remote.origin.url 2024-10-15 00:52:05,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-10-15 00:52:05,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-15 00:52:06,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-15 00:52:06,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-15 00:52:06,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-15 00:52:06,909 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:52:06,946 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:52:06,947 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-15 00:52:06,947 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-15 00:52:06,952 [ scc.git] DEBUG Check current status 2024-10-15 00:52:06,952 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-15 00:52:06,956 [ scc.git] DEBUG deab817 update setup-python to v4 2024-10-15 00:52:06,956 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-15 00:52:06,999 [ scc.config] DEBUG Found remote.origin.url 2024-10-15 00:52:07,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-10-15 00:52:07,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-15 00:52:08,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-15 00:52:08,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-15 00:52:09,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-15 00:52:09,081 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:52:09,118 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:52:09,119 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-15 00:52:09,119 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-15 00:52:09,124 [ scc.git] DEBUG Check current status 2024-10-15 00:52:09,124 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-15 00:52:09,128 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-10-15 00:52:09,128 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-15 00:52:09,169 [ scc.config] DEBUG Found remote.origin.url 2024-10-15 00:52:09,170 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-10-15 00:52:09,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-10-15 00:52:10,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-15 00:52:10,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-15 00:52:10,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-15 00:52:11,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-15 00:52:11,323 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:52:11,361 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:52:11,362 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-15 00:52:11,362 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-15 00:52:11,367 [ scc.git] DEBUG Check current status 2024-10-15 00:52:11,367 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-15 00:52:11,371 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-10-15 00:52:11,372 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-15 00:52:11,413 [ scc.config] DEBUG Found remote.origin.url 2024-10-15 00:52:11,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-15 00:52:11,720 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-15 00:52:11,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-10-15 00:52:12,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-15 00:52:12,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-15 00:52:13,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-15 00:52:13,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-15 00:52:13,661 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:52:13,699 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:52:13,700 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-15 00:52:13,700 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-15 00:52:13,705 [ scc.git] DEBUG Check current status 2024-10-15 00:52:13,705 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-15 00:52:13,710 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-10-15 00:52:13,710 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-15 00:52:13,749 [ scc.config] DEBUG Found remote.origin.url 2024-10-15 00:52:14,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-15 00:52:14,060 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-15 00:52:14,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-10-15 00:52:14,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-15 00:52:15,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-15 00:52:15,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-15 00:52:15,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-15 00:52:15,912 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:52:15,950 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:52:15,951 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-15 00:52:15,951 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-15 00:52:15,955 [ scc.git] DEBUG Check current status 2024-10-15 00:52:15,956 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-15 00:52:15,960 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-10-15 00:52:15,960 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-15 00:52:16,001 [ scc.config] DEBUG Found remote.origin.url 2024-10-15 00:52:16,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-10-15 00:52:16,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-15 00:52:17,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-15 00:52:17,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-15 00:52:18,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-15 00:52:18,037 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:52:18,076 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:52:18,076 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-15 00:52:18,076 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-15 00:52:18,081 [ scc.git] DEBUG Check current status 2024-10-15 00:52:18,081 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-15 00:52:18,096 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-10-15 00:52:18,096 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-15 00:52:18,138 [ scc.config] DEBUG Found remote.origin.url 2024-10-15 00:52:18,138 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-10-15 00:52:18,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-15 00:52:18,471 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-15 00:52:18,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-10-15 00:52:19,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-15 00:52:19,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-15 00:52:19,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-15 00:52:20,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-15 00:52:20,351 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:52:20,387 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:52:20,387 [ scc.git] DEBUG Resetting... 2024-10-15 00:52:20,387 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-10-15 00:52:20,396 [ scc.git] DEBUG HEAD is now at 67811ec merge master -Dorg -Snone 2024-10-15 00:52:20,396 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-10-15 00:52:20,487 [ scc.git] DEBUG Check current status 2024-10-15 00:52:20,488 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-15 00:52:20,493 [ scc.git] DEBUG 67811ec merge master -Dorg -Snone 2024-10-15 00:52:20,493 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-15 00:52:20,536 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-15 00:52:20,538 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-15 00:52:20,540 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-15 00:52:20,543 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-15 00:52:20,553 [ scc.git] DEBUG 1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1 omero-figure (v7.1.0-65-g1c0e5f95) 2024-10-15 00:52:20,555 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-15 00:52:20,557 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-15 00:52:20,560 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-15 00:52:20,563 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-15 00:52:20,566 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-15 00:52:20,568 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-15 00:52:20,571 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-15 00:52:20,573 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-15 00:52:20,576 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-15 00:52:20,579 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-15 00:52:20,581 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-15 00:52:20,583 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-15 00:52:20,586 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-15 00:52:20,588 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-15 00:52:20,590 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-15 00:52:20,593 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-15 00:52:20,596 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-15 00:52:20,597 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-10-15 00:52:20,597 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-10-15 00:52:20,597 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-10-15 00:52:20,597 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-10-15 00:52:20,597 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-10-15 00:52:20,597 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-10-15 00:52:20,598 [ scc.repo] DEBUG ## PRs found: 2024-10-15 00:52:20,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-10-15 00:52:21,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/393 HTTP/1.1" 200 None 2024-10-15 00:52:21,240 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-15 00:52:21,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d HTTP/1.1" 200 None 2024-10-15 00:52:22,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:52:22,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d HTTP/1.1" 200 None 2024-10-15 00:52:23,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:52:23,173 [ scc.repo] DEBUG - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' 2024-10-15 00:52:23,173 [ scc.repo] DEBUG ## Branches found: 2024-10-15 00:52:23,173 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:52:23,173 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:52:23,178 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-15 00:52:23,183 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-15 00:52:23,183 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-15 00:52:23,187 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-15 00:52:23,192 [ scc.git] DEBUG Already up to date. 2024-10-15 00:52:23,192 [ scc.git] DEBUG Calling 'git fetch origin pull/393/head' 2024-10-15 00:52:23,507 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-10-15 00:52:23,507 [ scc.git] DEBUG * branch refs/pull/393/head -> FETCH_HEAD 2024-10-15 00:52:23,512 [ scc.git] DEBUG ## Unique users: [] 2024-10-15 00:52:23,512 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:52:23,513 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:52:23,517 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d' 2024-10-15 00:52:23,522 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:52:23,527 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 393 (Bump omero-figure from `5f62399` to `1c0e5f9`) 8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d' 2024-10-15 00:52:23,532 [ scc.git] DEBUG Already up to date. 2024-10-15 00:52:23,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:52:23,697 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-15 00:52:23,749 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:52:23,749 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:52:23,754 [ scc.repo] DEBUG ## PRs found: 2024-10-15 00:52:24,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 None 2024-10-15 00:52:24,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/issues/66 HTTP/1.1" 200 None 2024-10-15 00:52:25,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-10-15 00:52:25,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:52:26,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-15 00:52:26,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-10-15 00:52:27,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/statuses/6a9ec1416390843e1243e924ff9d05acf2966875?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:52:27,040 [ scc.repo] DEBUG - PR 66 jburel 'Gateway 5 9 2' 2024-10-15 00:52:27,040 [ scc.repo] DEBUG ## Branches found: 2024-10-15 00:52:27,040 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-15 00:52:27,040 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:52:27,040 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:52:27,046 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-15 00:52:27,050 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-15 00:52:27,050 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-15 00:52:27,056 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-15 00:52:27,062 [ scc.git] DEBUG Already up to date. 2024-10-15 00:52:27,062 [ scc.git] DEBUG Calling 'git fetch origin pull/66/head' 2024-10-15 00:52:27,442 [ scc.git] DEBUG From https://github.com/ome/minimal-omero-client 2024-10-15 00:52:27,443 [ scc.git] DEBUG * branch refs/pull/66/head -> FETCH_HEAD 2024-10-15 00:52:27,447 [ scc.git] DEBUG ## Unique users: [] 2024-10-15 00:52:27,447 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:52:27,447 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:52:27,453 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a9ec1416390843e1243e924ff9d05acf2966875' 2024-10-15 00:52:27,458 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:52:27,463 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 66 (Gateway 5 9 2) 6a9ec1416390843e1243e924ff9d05acf2966875' 2024-10-15 00:52:27,497 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:52:27,500 [ scc.git] DEBUG .github/workflows/maven.yml | 4 ++-- 2024-10-15 00:52:27,500 [ scc.git] DEBUG build.gradle | 4 ++-- 2024-10-15 00:52:27,500 [ scc.git] DEBUG pom.xml | 4 ++-- 2024-10-15 00:52:27,500 [ scc.git] DEBUG 3 files changed, 6 insertions(+), 6 deletions(-) 2024-10-15 00:52:27,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:52:27,635 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-15 00:52:27,674 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:52:27,674 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:52:27,680 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:52:27,723 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-15 00:52:27,730 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6b4882e50> has no local changes 2024-10-15 00:52:27,731 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Generated by OMERO-plugins-push#212 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/)' 2024-10-15 00:52:27,739 [ scc.git] DEBUG [detached HEAD 245be57] merge master -Dorg -Ssuccess-only 2024-10-15 00:52:27,739 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:52:27,740 [ scc.repo] DEBUG ## PRs found: 2024-10-15 00:52:28,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-10-15 00:52:28,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-10-15 00:52:29,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-10-15 00:52:29,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-10-15 00:52:30,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:52:30,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-15 00:52:31,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-10-15 00:52:31,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:52:31,461 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-10-15 00:52:31,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-10-15 00:52:32,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-10-15 00:52:32,355 [ scc.repo] DEBUG ## Branches found: 2024-10-15 00:52:32,355 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-15 00:52:32,355 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:52:32,355 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:52:32,361 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-15 00:52:32,366 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-15 00:52:32,366 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-15 00:52:32,371 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-15 00:52:32,376 [ scc.git] DEBUG Already up to date. 2024-10-15 00:52:32,376 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-10-15 00:52:32,753 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-10-15 00:52:32,753 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-10-15 00:52:32,758 [ scc.git] DEBUG ## Unique users: [] 2024-10-15 00:52:32,758 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:52:32,758 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:52:32,763 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-10-15 00:52:32,768 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:52:32,772 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-10-15 00:52:32,971 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:52:32,974 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-10-15 00:52:32,974 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-10-15 00:52:33,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:52:33,111 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-15 00:52:33,148 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:52:33,149 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:52:33,153 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:52:33,189 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-15 00:52:33,195 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6b2abedc0> has no local changes 2024-10-15 00:52:33,195 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#212 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/)' 2024-10-15 00:52:33,203 [ scc.git] DEBUG [detached HEAD a3c8aa5] merge master -Dorg -Ssuccess-only 2024-10-15 00:52:33,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:52:33,203 [ scc.repo] DEBUG ## PRs found: 2024-10-15 00:52:33,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-10-15 00:52:34,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-10-15 00:52:34,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-10-15 00:52:34,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-10-15 00:52:35,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-10-15 00:52:35,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-10-15 00:52:36,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:52:36,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-10-15 00:52:37,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:52:37,187 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-10-15 00:52:37,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-10-15 00:52:38,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-10-15 00:52:38,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-10-15 00:52:38,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-10-15 00:52:39,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-10-15 00:52:39,404 [ scc.repo] DEBUG ## Branches found: 2024-10-15 00:52:39,404 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-15 00:52:39,404 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:52:39,404 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:52:39,410 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-15 00:52:39,414 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-15 00:52:39,414 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-15 00:52:39,419 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-15 00:52:39,424 [ scc.git] DEBUG Already up to date. 2024-10-15 00:52:39,424 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-10-15 00:52:39,882 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-10-15 00:52:39,882 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-10-15 00:52:39,887 [ scc.git] DEBUG ## Unique users: [] 2024-10-15 00:52:39,887 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:52:39,887 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:52:39,892 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-10-15 00:52:39,897 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:52:39,902 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-10-15 00:52:40,052 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-10-15 00:52:40,053 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:52:40,056 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-10-15 00:52:40,056 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-10-15 00:52:40,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:52:40,190 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-15 00:52:40,227 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:52:40,228 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:52:40,233 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:52:40,271 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-15 00:52:40,277 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6b2aceca0> has no local changes 2024-10-15 00:52:40,277 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#212 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/)' 2024-10-15 00:52:40,284 [ scc.git] DEBUG [detached HEAD 93a18ac] merge master -Dorg -Ssuccess-only 2024-10-15 00:52:40,284 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:52:40,285 [ scc.repo] DEBUG ## PRs found: 2024-10-15 00:52:40,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-10-15 00:52:41,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-10-15 00:52:41,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-10-15 00:52:42,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-10-15 00:52:42,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-15 00:52:43,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:52:43,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-15 00:52:43,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-15 00:52:44,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-10-15 00:52:44,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-15 00:52:45,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-10-15 00:52:45,224 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-10-15 00:52:45,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-10-15 00:52:46,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-10-15 00:52:46,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-10-15 00:52:47,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-10-15 00:52:47,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:52:48,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-10-15 00:52:48,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:52:48,515 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-10-15 00:52:48,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-10-15 00:52:49,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-10-15 00:52:49,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-10-15 00:52:50,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:52:50,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-10-15 00:52:51,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:52:51,215 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-10-15 00:52:51,215 [ scc.repo] DEBUG ## Branches found: 2024-10-15 00:52:51,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-15 00:52:51,215 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:52:51,215 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:52:51,222 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-15 00:52:51,227 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-15 00:52:51,228 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-15 00:52:51,233 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-15 00:52:51,241 [ scc.git] DEBUG Already up to date. 2024-10-15 00:52:51,241 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-10-15 00:52:51,758 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-15 00:52:51,758 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-10-15 00:52:51,763 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-10-15 00:52:52,055 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-15 00:52:52,055 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-10-15 00:52:52,059 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-10-15 00:52:52,541 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-15 00:52:52,542 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-10-15 00:52:52,546 [ scc.git] DEBUG ## Unique users: [] 2024-10-15 00:52:52,547 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:52:52,547 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:52:52,552 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-15 00:52:52,559 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:52:52,563 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-15 00:52:52,607 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-10-15 00:52:52,607 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-15 00:52:52,607 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-10-15 00:52:52,607 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-15 00:52:52,608 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-15 00:52:52,612 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-15 00:52:52,618 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-15 00:52:52,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:52:52,755 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-15 00:52:52,763 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-15 00:52:52,768 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#212](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-10-15 00:52:52,773 [ scc.config] DEBUG Found github.token 2024-10-15 00:52:52,773 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-10-15 00:52:52,773 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-15 00:52:52,779 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:52:52,783 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-15 00:52:52,797 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-10-15 00:52:52,797 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-10-15 00:52:52,797 [ scc.git] DEBUG Auto-merging setup.py 2024-10-15 00:52:52,797 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-10-15 00:52:52,797 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-15 00:52:52,797 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-10-15 00:52:52,797 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-10-15 00:52:52,798 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-15 00:52:52,798 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-15 00:52:52,803 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-15 00:52:52,810 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-15 00:52:53,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:52:53,137 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-15 00:52:53,144 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-15 00:52:53,149 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#212](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-10-15 00:52:53,154 [ scc.config] DEBUG Found github.token 2024-10-15 00:52:53,154 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-10-15 00:52:53,154 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-10-15 00:52:53,159 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:52:53,164 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-10-15 00:52:53,175 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-10-15 00:52:53,175 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-15 00:52:53,176 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:52:53,179 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-10-15 00:52:53,179 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-10-15 00:52:53,179 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-10-15 00:52:53,179 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-10-15 00:52:53,179 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-10-15 00:52:53,179 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-10-15 00:52:53,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:52:53,526 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-15 00:52:53,564 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:52:53,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:52:53,570 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:52:53,604 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-15 00:52:53,610 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6b2ae7e80> has no local changes 2024-10-15 00:52:53,610 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#212 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/)' 2024-10-15 00:52:53,617 [ scc.git] DEBUG [detached HEAD 137086e] merge master -Dorg -Ssuccess-only 2024-10-15 00:52:53,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:52:53,618 [ scc.repo] DEBUG ## PRs found: 2024-10-15 00:52:54,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-10-15 00:52:54,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/598 HTTP/1.1" 200 None 2024-10-15 00:52:54,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/597 HTTP/1.1" 200 None 2024-10-15 00:52:55,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/596 HTTP/1.1" 200 None 2024-10-15 00:52:55,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595 HTTP/1.1" 200 None 2024-10-15 00:52:56,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595/comments HTTP/1.1" 200 None 2024-10-15 00:52:56,268 [ scc.repo] DEBUG # ... Include label: include 2024-10-15 00:52:56,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cb283024150d8f1fe9f02a312cfa2930001d7814 HTTP/1.1" 200 None 2024-10-15 00:52:57,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cb283024150d8f1fe9f02a312cfa2930001d7814/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:52:57,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cb283024150d8f1fe9f02a312cfa2930001d7814/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-15 00:52:58,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cb283024150d8f1fe9f02a312cfa2930001d7814 HTTP/1.1" 200 None 2024-10-15 00:52:58,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/cb283024150d8f1fe9f02a312cfa2930001d7814?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:52:58,724 [ scc.repo] DEBUG - PR 595 Rdornier 'Rotate image panel by 90°' 2024-10-15 00:52:59,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592 HTTP/1.1" 200 None 2024-10-15 00:52:59,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592/comments HTTP/1.1" 200 None 2024-10-15 00:53:00,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-10-15 00:53:00,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:53:00,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-15 00:53:01,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-10-15 00:53:01,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/41a9df405c9f6580c89a64fc2c6eed778c431b1b?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:53:01,802 [ scc.repo] DEBUG - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-10-15 00:53:02,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591 HTTP/1.1" 200 None 2024-10-15 00:53:02,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591/comments HTTP/1.1" 200 None 2024-10-15 00:53:03,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584 HTTP/1.1" 200 None 2024-10-15 00:53:03,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584/comments HTTP/1.1" 200 None 2024-10-15 00:53:03,627 [ scc.repo] DEBUG # ... Include label: include 2024-10-15 00:53:04,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bcdf94652b2841ead8d4d9386ea3aff751e64b4a HTTP/1.1" 200 None 2024-10-15 00:53:04,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bcdf94652b2841ead8d4d9386ea3aff751e64b4a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:53:05,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bcdf94652b2841ead8d4d9386ea3aff751e64b4a/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-15 00:53:05,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bcdf94652b2841ead8d4d9386ea3aff751e64b4a HTTP/1.1" 200 None 2024-10-15 00:53:05,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/bcdf94652b2841ead8d4d9386ea3aff751e64b4a?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:53:05,951 [ scc.repo] DEBUG - PR 584 Rdornier 'Link url to image' 2024-10-15 00:53:06,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578 HTTP/1.1" 200 None 2024-10-15 00:53:06,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 200 None 2024-10-15 00:53:06,915 [ scc.repo] DEBUG # ... Include label: include 2024-10-15 00:53:07,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3e0427ff792396a9b61921fac9f1c8ef656522cd HTTP/1.1" 200 None 2024-10-15 00:53:07,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3e0427ff792396a9b61921fac9f1c8ef656522cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:53:08,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3e0427ff792396a9b61921fac9f1c8ef656522cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-15 00:53:08,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3e0427ff792396a9b61921fac9f1c8ef656522cd HTTP/1.1" 200 None 2024-10-15 00:53:09,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3e0427ff792396a9b61921fac9f1c8ef656522cd?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:53:09,335 [ scc.repo] DEBUG - PR 578 Rdornier 'Image outline' 2024-10-15 00:53:09,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-10-15 00:53:10,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-10-15 00:53:10,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/13200965/issues/577/comments?page=2 HTTP/1.1" 200 None 2024-10-15 00:53:10,833 [ scc.repo] DEBUG # ... Include label: include 2024-10-15 00:53:11,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4069931439f9e3daecd680e02fd1af13f7e2b755 HTTP/1.1" 200 None 2024-10-15 00:53:11,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4069931439f9e3daecd680e02fd1af13f7e2b755/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:53:12,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4069931439f9e3daecd680e02fd1af13f7e2b755/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-15 00:53:12,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4069931439f9e3daecd680e02fd1af13f7e2b755 HTTP/1.1" 200 None 2024-10-15 00:53:13,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/4069931439f9e3daecd680e02fd1af13f7e2b755?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:53:13,187 [ scc.repo] DEBUG - PR 577 Rdornier 'Fill rois' 2024-10-15 00:53:13,188 [ scc.repo] DEBUG ## Branches found: 2024-10-15 00:53:13,188 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-15 00:53:13,188 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:53:13,188 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:13,194 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-15 00:53:13,199 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-15 00:53:13,199 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-15 00:53:13,205 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-15 00:53:13,210 [ scc.git] DEBUG Already up to date. 2024-10-15 00:53:13,210 [ scc.git] DEBUG Calling 'git fetch origin pull/577/head' 2024-10-15 00:53:14,107 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-15 00:53:14,107 [ scc.git] DEBUG * branch refs/pull/577/head -> FETCH_HEAD 2024-10-15 00:53:14,113 [ scc.git] DEBUG Calling 'git fetch origin pull/578/head' 2024-10-15 00:53:14,425 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-15 00:53:14,426 [ scc.git] DEBUG * branch refs/pull/578/head -> FETCH_HEAD 2024-10-15 00:53:14,431 [ scc.git] DEBUG Calling 'git fetch origin pull/584/head' 2024-10-15 00:53:14,726 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-15 00:53:14,727 [ scc.git] DEBUG * branch refs/pull/584/head -> FETCH_HEAD 2024-10-15 00:53:14,732 [ scc.git] DEBUG Calling 'git fetch origin pull/592/head' 2024-10-15 00:53:15,174 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-15 00:53:15,174 [ scc.git] DEBUG * branch refs/pull/592/head -> FETCH_HEAD 2024-10-15 00:53:15,181 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2024-10-15 00:53:15,477 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-15 00:53:15,477 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2024-10-15 00:53:15,483 [ scc.git] DEBUG ## Unique users: [] 2024-10-15 00:53:15,484 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:53:15,484 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:15,490 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4069931439f9e3daecd680e02fd1af13f7e2b755' 2024-10-15 00:53:15,499 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:15,505 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 577 (Fill rois) 4069931439f9e3daecd680e02fd1af13f7e2b755' 2024-10-15 00:53:15,520 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:53:15,526 [ scc.git] DEBUG .gitignore | 2 + 2024-10-15 00:53:15,526 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 21 ++++++-- 2024-10-15 00:53:15,526 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-10-15 00:53:15,527 [ scc.git] DEBUG src/js/models/roi_model.js | 11 ++++ 2024-10-15 00:53:15,527 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 42 ++++++++++++++- 2024-10-15 00:53:15,527 [ scc.git] DEBUG src/js/shape_editor/line.js | 16 ++++++ 2024-10-15 00:53:15,527 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 40 +++++++++++++- 2024-10-15 00:53:15,527 [ scc.git] DEBUG src/js/shape_editor/rect.js | 48 +++++++++++++++-- 2024-10-15 00:53:15,527 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 62 +++++++++++++++++++++- 2024-10-15 00:53:15,527 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 34 ++++++++++-- 2024-10-15 00:53:15,527 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 56 ++++++++++++++++++- 2024-10-15 00:53:15,527 [ scc.git] DEBUG 11 files changed, 316 insertions(+), 17 deletions(-) 2024-10-15 00:53:15,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:53:15,656 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3e0427ff792396a9b61921fac9f1c8ef656522cd' 2024-10-15 00:53:15,665 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:15,671 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 578 (Image outline) 3e0427ff792396a9b61921fac9f1c8ef656522cd' 2024-10-15 00:53:16,031 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-10-15 00:53:16,032 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-15 00:53:16,032 [ scc.git] DEBUG Auto-merging src/js/views/roi_modal_view.js 2024-10-15 00:53:16,032 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:53:16,039 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 231 ++++++++++++++------- 2024-10-15 00:53:16,039 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-10-15 00:53:16,039 [ scc.git] DEBUG src/js/models/panel_model.js | 31 +++ 2024-10-15 00:53:16,039 [ scc.git] DEBUG src/js/views/panel_view.js | 53 ++++- 2024-10-15 00:53:16,039 [ scc.git] DEBUG src/js/views/right_panel_view.js | 56 ++++- 2024-10-15 00:53:16,039 [ scc.git] DEBUG src/templates/rois_form.template.html | 68 +++++- 2024-10-15 00:53:16,039 [ scc.git] DEBUG 6 files changed, 361 insertions(+), 79 deletions(-) 2024-10-15 00:53:16,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:53:16,177 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bcdf94652b2841ead8d4d9386ea3aff751e64b4a' 2024-10-15 00:53:16,188 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:16,194 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 584 (Link url to image) bcdf94652b2841ead8d4d9386ea3aff751e64b4a' 2024-10-15 00:53:16,367 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:53:16,371 [ scc.git] DEBUG omero_figure/views.py | 134 +++++++++++++++++++++++++++++++++++++----- 2024-10-15 00:53:16,371 [ scc.git] DEBUG src/js/models/figure_model.js | 10 ++-- 2024-10-15 00:53:16,371 [ scc.git] DEBUG src/js/views/figure_view.js | 10 ++-- 2024-10-15 00:53:16,371 [ scc.git] DEBUG 3 files changed, 128 insertions(+), 26 deletions(-) 2024-10-15 00:53:16,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:53:16,555 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-10-15 00:53:16,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:16,570 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 592 (Filter owners and groups dropdown lists) 41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-10-15 00:53:16,740 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:53:16,744 [ scc.git] DEBUG src/js/views/files.js | 33 ++++++++++++++++++++++++--------- 2024-10-15 00:53:16,744 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 9 deletions(-) 2024-10-15 00:53:16,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:53:16,938 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cb283024150d8f1fe9f02a312cfa2930001d7814' 2024-10-15 00:53:16,948 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:16,954 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (Rotate image panel by 90°) cb283024150d8f1fe9f02a312cfa2930001d7814' 2024-10-15 00:53:17,097 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-15 00:53:17,097 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-10-15 00:53:17,097 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2024-10-15 00:53:17,097 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-10-15 00:53:17,155 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:53:17,161 [ scc.git] DEBUG package-lock.json | 32 ++++++----------------- 2024-10-15 00:53:17,161 [ scc.git] DEBUG package.json | 2 +- 2024-10-15 00:53:17,161 [ scc.git] DEBUG src/css/figure.css | 13 ++++++++- 2024-10-15 00:53:17,161 [ scc.git] DEBUG src/js/models/panel_model.js | 21 ++++++++++++--- 2024-10-15 00:53:17,161 [ scc.git] DEBUG src/js/views/panel_view.js | 6 ++--- 2024-10-15 00:53:17,161 [ scc.git] DEBUG src/js/views/right_panel_view.js | 14 +++++++++- 2024-10-15 00:53:17,161 [ scc.git] DEBUG src/templates/image_display_options.template.html | 6 +++++ 2024-10-15 00:53:17,161 [ scc.git] DEBUG 7 files changed, 61 insertions(+), 33 deletions(-) 2024-10-15 00:53:17,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:53:17,314 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-15 00:53:17,352 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:53:17,352 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:17,357 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:53:17,391 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-15 00:53:17,399 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6b2ae5820> has no local changes 2024-10-15 00:53:17,399 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) - PR 596 Tom-TBT 'Dynamic lut for figure' (user: Tom-TBT) - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 577 Rdornier 'Fill rois' - PR 578 Rdornier 'Image outline' - PR 584 Rdornier 'Link url to image' - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 595 Rdornier 'Rotate image panel by 90°' Generated by OMERO-plugins-push#212 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/)' 2024-10-15 00:53:17,469 [ scc.git] DEBUG [detached HEAD 2665abbc] merge master -Dorg -Ssuccess-only 2024-10-15 00:53:17,469 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:53:17,470 [ scc.repo] DEBUG ## PRs found: 2024-10-15 00:53:17,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-10-15 00:53:18,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-10-15 00:53:18,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-10-15 00:53:19,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-10-15 00:53:19,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:53:20,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-10-15 00:53:20,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:53:20,520 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-10-15 00:53:20,520 [ scc.repo] DEBUG ## Branches found: 2024-10-15 00:53:20,520 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-15 00:53:20,520 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:53:20,520 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:20,526 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-15 00:53:20,530 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-15 00:53:20,530 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-15 00:53:20,535 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-15 00:53:20,540 [ scc.git] DEBUG Already up to date. 2024-10-15 00:53:20,540 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-10-15 00:53:20,870 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-10-15 00:53:20,871 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-10-15 00:53:20,875 [ scc.git] DEBUG ## Unique users: [] 2024-10-15 00:53:20,875 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:53:20,875 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:20,880 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-10-15 00:53:20,886 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:20,892 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-10-15 00:53:20,957 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-10-15 00:53:20,958 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:53:20,961 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-10-15 00:53:20,961 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-10-15 00:53:21,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:53:21,097 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-15 00:53:21,139 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:53:21,139 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:21,145 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:53:21,184 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-15 00:53:21,191 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6b2aaa700> has no local changes 2024-10-15 00:53:21,191 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#212 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/)' 2024-10-15 00:53:21,200 [ scc.git] DEBUG [detached HEAD 094e3d1] merge master -Dorg -Ssuccess-only 2024-10-15 00:53:21,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:53:21,200 [ scc.repo] DEBUG ## PRs found: 2024-10-15 00:53:21,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-10-15 00:53:22,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-10-15 00:53:22,003 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-15 00:53:22,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-10-15 00:53:23,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:53:23,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-15 00:53:24,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-10-15 00:53:24,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:53:24,467 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-10-15 00:53:24,467 [ scc.repo] DEBUG ## Branches found: 2024-10-15 00:53:24,468 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-15 00:53:24,468 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:53:24,468 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:24,474 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-15 00:53:24,480 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-15 00:53:24,480 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-15 00:53:24,486 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-15 00:53:24,492 [ scc.git] DEBUG Already up to date. 2024-10-15 00:53:24,493 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-10-15 00:53:24,816 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-10-15 00:53:24,816 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-10-15 00:53:24,821 [ scc.git] DEBUG ## Unique users: [] 2024-10-15 00:53:24,821 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:53:24,821 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:24,827 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-10-15 00:53:24,832 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:24,837 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-10-15 00:53:24,847 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:53:24,850 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-10-15 00:53:24,850 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-10-15 00:53:24,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:53:24,990 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-15 00:53:25,029 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:53:25,030 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:25,037 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:53:25,073 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-15 00:53:25,082 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6b1a695b0> has no local changes 2024-10-15 00:53:25,082 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#212 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/)' 2024-10-15 00:53:25,092 [ scc.git] DEBUG [detached HEAD 1086e3c] merge master -Dorg -Ssuccess-only 2024-10-15 00:53:25,093 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:53:25,093 [ scc.repo] DEBUG ## PRs found: 2024-10-15 00:53:25,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-10-15 00:53:26,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/486 HTTP/1.1" 200 None 2024-10-15 00:53:26,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/485 HTTP/1.1" 200 None 2024-10-15 00:53:26,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/484 HTTP/1.1" 200 None 2024-10-15 00:53:27,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/484/comments HTTP/1.1" 200 None 2024-10-15 00:53:27,359 [ scc.repo] DEBUG # ... Include label: include 2024-10-15 00:53:27,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/68b90aebf749c074bde218ba36d3ce662068cd05 HTTP/1.1" 200 None 2024-10-15 00:53:28,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/68b90aebf749c074bde218ba36d3ce662068cd05/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:53:28,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/68b90aebf749c074bde218ba36d3ce662068cd05/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-15 00:53:29,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/68b90aebf749c074bde218ba36d3ce662068cd05 HTTP/1.1" 200 None 2024-10-15 00:53:29,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/68b90aebf749c074bde218ba36d3ce662068cd05?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:53:29,657 [ scc.repo] DEBUG - PR 484 barrettMCW 'improved mirroring' 2024-10-15 00:53:30,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/483 HTTP/1.1" 200 None 2024-10-15 00:53:30,120 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-15 00:53:30,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-10-15 00:53:31,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:53:31,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-15 00:53:32,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-10-15 00:53:32,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/384771c9fd794e2b472a35dca65e6ed96be98c4d?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:53:32,607 [ scc.repo] DEBUG - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-10-15 00:53:33,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482 HTTP/1.1" 200 None 2024-10-15 00:53:33,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482/comments HTTP/1.1" 200 None 2024-10-15 00:53:34,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-10-15 00:53:34,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:53:35,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-15 00:53:35,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-10-15 00:53:35,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:53:35,852 [ scc.repo] DEBUG - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-10-15 00:53:36,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-10-15 00:53:36,290 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-15 00:53:36,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-10-15 00:53:37,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:53:37,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-15 00:53:38,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-10-15 00:53:38,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:53:38,902 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-10-15 00:53:39,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-10-15 00:53:39,339 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-15 00:53:39,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-10-15 00:53:40,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:53:40,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-15 00:53:41,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-10-15 00:53:41,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:53:41,974 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-10-15 00:53:42,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-10-15 00:53:42,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-10-15 00:53:43,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-10-15 00:53:43,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:53:44,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-15 00:53:44,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-10-15 00:53:45,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:53:45,170 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-10-15 00:53:45,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-10-15 00:53:46,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-10-15 00:53:46,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-10-15 00:53:47,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:53:47,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-15 00:53:48,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-10-15 00:53:48,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:53:48,415 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-10-15 00:53:48,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-10-15 00:53:49,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-10-15 00:53:49,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-10-15 00:53:50,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:53:50,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-10-15 00:53:51,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:53:51,130 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-10-15 00:53:51,131 [ scc.repo] DEBUG ## Branches found: 2024-10-15 00:53:51,131 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-15 00:53:51,131 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:53:51,131 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:51,137 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-15 00:53:51,141 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-15 00:53:51,141 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-15 00:53:51,211 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-15 00:53:51,218 [ scc.git] DEBUG Already up to date. 2024-10-15 00:53:51,218 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-10-15 00:53:51,995 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-15 00:53:51,995 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-10-15 00:53:52,000 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-10-15 00:53:53,439 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-15 00:53:53,439 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-10-15 00:53:53,444 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-10-15 00:53:53,817 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-15 00:53:53,817 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-10-15 00:53:53,822 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-10-15 00:53:54,118 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-15 00:53:54,118 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-10-15 00:53:54,123 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-10-15 00:53:54,412 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-15 00:53:54,412 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-10-15 00:53:54,417 [ scc.git] DEBUG Calling 'git fetch origin pull/482/head' 2024-10-15 00:53:54,858 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-15 00:53:54,858 [ scc.git] DEBUG * branch refs/pull/482/head -> FETCH_HEAD 2024-10-15 00:53:54,863 [ scc.git] DEBUG Calling 'git fetch origin pull/483/head' 2024-10-15 00:53:55,142 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-15 00:53:55,143 [ scc.git] DEBUG * branch refs/pull/483/head -> FETCH_HEAD 2024-10-15 00:53:55,147 [ scc.git] DEBUG Calling 'git fetch origin pull/484/head' 2024-10-15 00:53:56,230 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-15 00:53:56,230 [ scc.git] DEBUG * branch refs/pull/484/head -> FETCH_HEAD 2024-10-15 00:53:56,235 [ scc.git] DEBUG ## Unique users: [] 2024-10-15 00:53:56,235 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:53:56,235 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:56,241 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-10-15 00:53:56,247 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:56,251 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-10-15 00:53:56,438 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-10-15 00:53:56,438 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:53:56,442 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-10-15 00:53:56,442 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-10-15 00:53:56,442 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-10-15 00:53:56,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:53:56,580 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-10-15 00:53:56,587 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:56,591 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-10-15 00:53:56,918 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-10-15 00:53:56,919 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-10-15 00:53:56,919 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-10-15 00:53:56,919 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-10-15 00:53:56,919 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:53:56,923 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-10-15 00:53:56,923 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-10-15 00:53:56,923 [ scc.git] DEBUG src/app/header.html | 5 + 2024-10-15 00:53:56,923 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-10-15 00:53:56,923 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-10-15 00:53:56,923 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-10-15 00:53:56,924 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-10-15 00:53:56,924 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-10-15 00:53:57,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:53:57,058 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-10-15 00:53:57,065 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:57,070 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-10-15 00:53:57,239 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-10-15 00:53:57,239 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:53:57,242 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-10-15 00:53:57,243 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-10-15 00:53:57,243 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-10-15 00:53:57,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:53:57,437 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-10-15 00:53:57,444 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:57,449 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-10-15 00:53:57,673 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:53:57,683 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-10-15 00:53:57,683 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-10-15 00:53:57,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:53:57,818 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-10-15 00:53:57,860 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:57,866 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-10-15 00:53:57,995 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-15 00:53:57,996 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:53:58,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:53:58,218 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-10-15 00:53:58,225 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:58,230 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 482 (Support ?collapse_left/right and ?full_page=true) 7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-10-15 00:53:58,503 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-10-15 00:53:58,504 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-10-15 00:53:58,504 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-10-15 00:53:58,504 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:53:58,509 [ scc.git] DEBUG src/app/context.js | 12 +++++++++++ 2024-10-15 00:53:58,509 [ scc.git] DEBUG src/app/index.js | 5 +---- 2024-10-15 00:53:58,509 [ scc.git] DEBUG src/model/image_info.js | 1 - 2024-10-15 00:53:58,509 [ scc.git] DEBUG src/utils/constants.js | 5 ++++- 2024-10-15 00:53:58,509 [ scc.git] DEBUG src/utils/ui.js | 44 ++++++++++++++++++++++---------------- 2024-10-15 00:53:58,509 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 1 - 2024-10-15 00:53:58,509 [ scc.git] DEBUG 6 files changed, 42 insertions(+), 26 deletions(-) 2024-10-15 00:53:58,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:53:58,639 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-10-15 00:53:58,663 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:58,667 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 483 (Bump webpack from 5.82.0 to 5.94.0) 384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-10-15 00:53:58,989 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-15 00:53:58,990 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:53:59,000 [ scc.git] DEBUG package-lock.json | 686 ++++++++++++++++++++++++++---------------------------- 2024-10-15 00:53:59,000 [ scc.git] DEBUG package.json | 2 +- 2024-10-15 00:53:59,000 [ scc.git] DEBUG 2 files changed, 329 insertions(+), 359 deletions(-) 2024-10-15 00:53:59,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:53:59,148 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...68b90aebf749c074bde218ba36d3ce662068cd05' 2024-10-15 00:53:59,157 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:59,163 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 484 (improved mirroring) 68b90aebf749c074bde218ba36d3ce662068cd05' 2024-10-15 00:53:59,275 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:53:59,278 [ scc.git] DEBUG src/viewers/viewer/controls/Mirror.js | 235 ++++++++++++++++------------------ 2024-10-15 00:53:59,279 [ scc.git] DEBUG 1 file changed, 111 insertions(+), 124 deletions(-) 2024-10-15 00:53:59,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:53:59,521 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-15 00:53:59,559 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:53:59,559 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:53:59,564 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:53:59,601 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-15 00:53:59,609 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6b2aac820> has no local changes 2024-10-15 00:53:59,609 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 486 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) - PR 485 Tom-TBT 'Dynamic LUT for iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' - PR 484 barrettMCW 'improved mirroring' Generated by OMERO-plugins-push#212 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/)' 2024-10-15 00:53:59,618 [ scc.git] DEBUG [detached HEAD 3686335] merge master -Dorg -Ssuccess-only 2024-10-15 00:53:59,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:53:59,620 [ scc.repo] DEBUG ## PRs found: 2024-10-15 00:54:00,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-10-15 00:54:00,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/86 HTTP/1.1" 200 None 2024-10-15 00:54:00,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/86/comments HTTP/1.1" 200 None 2024-10-15 00:54:01,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b HTTP/1.1" 200 None 2024-10-15 00:54:01,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:54:02,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-15 00:54:02,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-10-15 00:54:03,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-10-15 00:54:03,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-10-15 00:54:04,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:54:04,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-10-15 00:54:05,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:54:05,268 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-10-15 00:54:05,268 [ scc.repo] DEBUG ## Branches found: 2024-10-15 00:54:05,269 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-15 00:54:05,269 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:05,269 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:05,276 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-15 00:54:05,282 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-15 00:54:05,282 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-15 00:54:05,288 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-15 00:54:05,294 [ scc.git] DEBUG Already up to date. 2024-10-15 00:54:05,294 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-10-15 00:54:05,598 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-10-15 00:54:05,598 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-10-15 00:54:05,602 [ scc.git] DEBUG ## Unique users: [] 2024-10-15 00:54:05,603 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:05,603 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:05,608 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-10-15 00:54:05,615 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:05,620 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-10-15 00:54:05,630 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:54:05,632 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-10-15 00:54:05,632 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-10-15 00:54:05,632 [ scc.git] DEBUG requirements.txt | 2 +- 2024-10-15 00:54:05,632 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-10-15 00:54:05,632 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-10-15 00:54:05,632 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-10-15 00:54:05,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:54:05,763 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-15 00:54:05,803 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:05,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:05,808 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:54:05,845 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-15 00:54:05,851 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6b0213370> has no local changes 2024-10-15 00:54:05,851 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#212 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/)' 2024-10-15 00:54:05,859 [ scc.git] DEBUG [detached HEAD 5047836] merge master -Dorg -Ssuccess-only 2024-10-15 00:54:05,859 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:54:05,860 [ scc.repo] DEBUG ## PRs found: 2024-10-15 00:54:06,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-10-15 00:54:06,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86 HTTP/1.1" 200 None 2024-10-15 00:54:07,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86/comments HTTP/1.1" 200 None 2024-10-15 00:54:07,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-10-15 00:54:08,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:54:08,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-10-15 00:54:09,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/d222577494040c63f4ce3c1a266d43257c9f1c61?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:54:09,232 [ scc.repo] DEBUG - PR 86 dominikl 'Add tablename option' 2024-10-15 00:54:09,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-10-15 00:54:10,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-10-15 00:54:10,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-10-15 00:54:11,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:54:11,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-10-15 00:54:11,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:54:11,983 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-10-15 00:54:12,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-10-15 00:54:12,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-10-15 00:54:13,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-10-15 00:54:13,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:54:14,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-10-15 00:54:14,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:54:14,701 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-10-15 00:54:14,701 [ scc.repo] DEBUG ## Branches found: 2024-10-15 00:54:14,702 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-15 00:54:14,702 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:14,702 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:14,709 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-15 00:54:14,714 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-15 00:54:14,714 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-15 00:54:14,720 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-15 00:54:14,730 [ scc.git] DEBUG Already up to date. 2024-10-15 00:54:14,730 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-10-15 00:54:15,294 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-15 00:54:15,294 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-10-15 00:54:15,300 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-10-15 00:54:16,046 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-15 00:54:16,046 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-10-15 00:54:16,051 [ scc.git] DEBUG Calling 'git fetch origin pull/86/head' 2024-10-15 00:54:16,338 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-15 00:54:16,338 [ scc.git] DEBUG * branch refs/pull/86/head -> FETCH_HEAD 2024-10-15 00:54:16,343 [ scc.git] DEBUG ## Unique users: [] 2024-10-15 00:54:16,343 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:16,343 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:16,348 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-15 00:54:16,356 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:16,362 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-15 00:54:16,470 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-10-15 00:54:16,470 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-10-15 00:54:16,470 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-10-15 00:54:16,470 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-10-15 00:54:16,470 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-15 00:54:16,471 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-15 00:54:16,479 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-15 00:54:16,485 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-15 00:54:16,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:54:16,613 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-15 00:54:16,620 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-15 00:54:16,626 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#212](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-10-15 00:54:16,631 [ scc.config] DEBUG Found github.token 2024-10-15 00:54:16,631 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-10-15 00:54:16,631 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-15 00:54:16,638 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:16,643 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-15 00:54:16,661 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-10-15 00:54:16,662 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-10-15 00:54:16,662 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-10-15 00:54:16,662 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-15 00:54:16,662 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-15 00:54:16,669 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-15 00:54:16,676 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-15 00:54:16,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:54:16,997 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-15 00:54:17,004 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-15 00:54:17,009 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#212](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-10-15 00:54:17,013 [ scc.config] DEBUG Found github.token 2024-10-15 00:54:17,013 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-10-15 00:54:17,013 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-10-15 00:54:17,019 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:17,025 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 86 (Add tablename option) d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-10-15 00:54:17,056 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:54:17,058 [ scc.git] DEBUG src/omero_metadata/cli.py | 10 ++++++++-- 2024-10-15 00:54:17,058 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 2 deletions(-) 2024-10-15 00:54:17,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:54:17,377 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-15 00:54:17,418 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:17,419 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:17,424 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:54:17,463 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-15 00:54:17,469 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6b1a55ee0> has no local changes 2024-10-15 00:54:17,469 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#212 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/)' 2024-10-15 00:54:17,478 [ scc.git] DEBUG [detached HEAD ccbd754] merge master -Dorg -Ssuccess-only 2024-10-15 00:54:17,479 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:54:17,479 [ scc.repo] DEBUG ## PRs found: 2024-10-15 00:54:17,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-10-15 00:54:18,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-10-15 00:54:18,375 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-15 00:54:18,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-10-15 00:54:19,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:54:19,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-15 00:54:20,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-10-15 00:54:20,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:54:20,912 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-10-15 00:54:21,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-10-15 00:54:21,347 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-15 00:54:21,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-10-15 00:54:22,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:54:22,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-15 00:54:23,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-10-15 00:54:23,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:54:23,765 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-10-15 00:54:24,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-10-15 00:54:24,200 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-15 00:54:24,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-10-15 00:54:25,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:54:25,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-15 00:54:26,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-10-15 00:54:26,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:54:26,611 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-10-15 00:54:27,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-10-15 00:54:27,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-10-15 00:54:27,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-10-15 00:54:28,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-10-15 00:54:28,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-10-15 00:54:29,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-10-15 00:54:29,309 [ scc.repo] DEBUG ## Branches found: 2024-10-15 00:54:29,309 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-15 00:54:29,310 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:29,310 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:29,315 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-15 00:54:29,320 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-15 00:54:29,320 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-15 00:54:29,325 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-15 00:54:29,331 [ scc.git] DEBUG Already up to date. 2024-10-15 00:54:29,332 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-10-15 00:54:29,670 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-15 00:54:29,671 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-10-15 00:54:29,675 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-10-15 00:54:29,986 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-15 00:54:29,986 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-10-15 00:54:29,990 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-10-15 00:54:30,285 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-15 00:54:30,285 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-10-15 00:54:30,290 [ scc.git] DEBUG ## Unique users: [] 2024-10-15 00:54:30,290 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:30,290 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:30,299 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-10-15 00:54:30,305 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:30,310 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-10-15 00:54:30,319 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:54:30,322 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-10-15 00:54:30,322 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-10-15 00:54:30,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:54:30,454 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-10-15 00:54:30,460 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:30,465 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-10-15 00:54:30,488 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-15 00:54:30,489 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:54:30,492 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-10-15 00:54:30,492 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-10-15 00:54:31,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:54:31,559 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-10-15 00:54:31,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:31,570 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-10-15 00:54:31,580 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-15 00:54:31,581 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:54:31,584 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-10-15 00:54:31,584 [ scc.git] DEBUG package.json | 2 +- 2024-10-15 00:54:31,584 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-10-15 00:54:31,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:54:31,938 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-15 00:54:31,978 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:31,978 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:31,984 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:54:32,020 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-15 00:54:32,026 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6b1a4abe0> has no local changes 2024-10-15 00:54:32,026 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#212 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/)' 2024-10-15 00:54:32,081 [ scc.git] DEBUG [detached HEAD a10f2a7] merge master -Dorg -Ssuccess-only 2024-10-15 00:54:32,081 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:54:32,082 [ scc.repo] DEBUG ## PRs found: 2024-10-15 00:54:32,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-10-15 00:54:32,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-10-15 00:54:33,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-10-15 00:54:33,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:54:34,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-10-15 00:54:34,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:54:34,691 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-10-15 00:54:34,691 [ scc.repo] DEBUG ## Branches found: 2024-10-15 00:54:34,691 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-15 00:54:34,691 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:34,691 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:34,697 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-15 00:54:34,702 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-15 00:54:34,702 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-15 00:54:34,707 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-15 00:54:34,712 [ scc.git] DEBUG Already up to date. 2024-10-15 00:54:34,712 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-10-15 00:54:35,028 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-10-15 00:54:35,028 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-10-15 00:54:35,033 [ scc.git] DEBUG ## Unique users: [] 2024-10-15 00:54:35,033 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:35,033 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:35,039 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-10-15 00:54:35,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:35,049 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-10-15 00:54:35,058 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:54:35,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:54:35,225 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-15 00:54:35,263 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:35,263 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:35,269 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:54:35,306 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-15 00:54:35,313 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6b0222fa0> has no local changes 2024-10-15 00:54:35,314 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#212 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/)' 2024-10-15 00:54:35,322 [ scc.git] DEBUG [detached HEAD a791922] merge master -Dorg -Ssuccess-only 2024-10-15 00:54:35,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:54:35,323 [ scc.repo] DEBUG ## PRs found: 2024-10-15 00:54:35,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-10-15 00:54:36,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-10-15 00:54:36,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-10-15 00:54:37,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-10-15 00:54:37,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-10-15 00:54:38,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:54:38,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-10-15 00:54:38,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:54:38,930 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-10-15 00:54:38,930 [ scc.repo] DEBUG ## Branches found: 2024-10-15 00:54:38,930 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-15 00:54:38,930 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:38,930 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:38,937 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-15 00:54:38,942 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-15 00:54:38,942 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-15 00:54:38,947 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-15 00:54:38,952 [ scc.git] DEBUG Already up to date. 2024-10-15 00:54:38,952 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-10-15 00:54:39,423 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-10-15 00:54:39,424 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-10-15 00:54:39,428 [ scc.git] DEBUG ## Unique users: [] 2024-10-15 00:54:39,429 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:39,429 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:39,434 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-10-15 00:54:39,441 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:39,446 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-10-15 00:54:39,457 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-10-15 00:54:39,457 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:54:39,460 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-10-15 00:54:39,460 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-10-15 00:54:39,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:54:39,602 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-15 00:54:39,643 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:39,643 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:39,649 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:54:39,685 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-15 00:54:39,690 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6b020cc70> has no local changes 2024-10-15 00:54:39,691 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#212 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/)' 2024-10-15 00:54:39,699 [ scc.git] DEBUG [detached HEAD 8205eb2] merge master -Dorg -Ssuccess-only 2024-10-15 00:54:39,699 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:54:39,700 [ scc.repo] DEBUG ## PRs found: 2024-10-15 00:54:40,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-10-15 00:54:40,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-10-15 00:54:41,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-10-15 00:54:41,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-10-15 00:54:42,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:54:42,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-10-15 00:54:43,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:54:43,017 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-10-15 00:54:43,017 [ scc.repo] DEBUG ## Branches found: 2024-10-15 00:54:43,018 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-15 00:54:43,018 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:43,018 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:43,024 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-15 00:54:43,029 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-15 00:54:43,029 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-15 00:54:43,034 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-15 00:54:43,040 [ scc.git] DEBUG Already up to date. 2024-10-15 00:54:43,040 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-10-15 00:54:43,395 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-10-15 00:54:43,395 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-10-15 00:54:43,399 [ scc.git] DEBUG ## Unique users: [] 2024-10-15 00:54:43,400 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:43,400 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:43,405 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-15 00:54:43,411 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:43,417 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-15 00:54:43,462 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-10-15 00:54:43,463 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-10-15 00:54:43,463 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-10-15 00:54:43,463 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-10-15 00:54:43,463 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-10-15 00:54:43,463 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-10-15 00:54:43,463 [ scc.git] DEBUG Auto-merging setup.py 2024-10-15 00:54:43,463 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-10-15 00:54:43,463 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-15 00:54:43,463 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-15 00:54:43,469 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-10-15 00:54:43,476 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-10-15 00:54:43,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:54:43,607 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-15 00:54:43,615 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-10-15 00:54:43,621 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#212](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - omero_signup/signup_settings.py - setup.py - omero_signup/urls.py --conflicts 2024-10-15 00:54:43,626 [ scc.config] DEBUG Found github.token 2024-10-15 00:54:43,626 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-10-15 00:54:43,626 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-15 00:54:43,664 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:43,665 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:43,671 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:54:43,711 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-15 00:54:43,717 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6b0204fd0> has no local changes 2024-10-15 00:54:43,717 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#212 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/)' 2024-10-15 00:54:43,725 [ scc.git] DEBUG [detached HEAD 24896fe] merge master -Dorg -Ssuccess-only 2024-10-15 00:54:43,725 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:54:43,726 [ scc.repo] DEBUG ## PRs found: 2024-10-15 00:54:44,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-10-15 00:54:44,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-10-15 00:54:44,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-10-15 00:54:45,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-10-15 00:54:45,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:54:46,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-10-15 00:54:46,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:54:46,798 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-10-15 00:54:46,798 [ scc.repo] DEBUG ## Branches found: 2024-10-15 00:54:46,798 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-15 00:54:46,798 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:46,798 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:46,804 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-15 00:54:46,809 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-15 00:54:46,809 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-15 00:54:46,815 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-15 00:54:46,821 [ scc.git] DEBUG Already up to date. 2024-10-15 00:54:46,821 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-10-15 00:54:47,179 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-10-15 00:54:47,179 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-10-15 00:54:47,184 [ scc.git] DEBUG ## Unique users: [] 2024-10-15 00:54:47,184 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:47,185 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:47,191 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-10-15 00:54:47,197 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:47,202 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-10-15 00:54:47,218 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:54:47,221 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-10-15 00:54:47,221 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-10-15 00:54:47,221 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-10-15 00:54:47,221 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-10-15 00:54:47,221 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-10-15 00:54:47,221 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-10-15 00:54:47,221 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-10-15 00:54:47,221 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-10-15 00:54:47,223 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-10-15 00:54:47,223 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-10-15 00:54:47,223 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-10-15 00:54:47,223 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-10-15 00:54:47,223 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-10-15 00:54:47,223 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-10-15 00:54:47,223 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-10-15 00:54:47,223 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-10-15 00:54:47,223 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-10-15 00:54:47,224 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-10-15 00:54:47,224 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-10-15 00:54:47,224 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-10-15 00:54:47,224 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-10-15 00:54:47,224 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-10-15 00:54:47,224 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-10-15 00:54:47,224 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-10-15 00:54:47,224 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-10-15 00:54:47,224 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-10-15 00:54:47,224 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-10-15 00:54:47,224 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-10-15 00:54:47,224 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-10-15 00:54:47,224 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-10-15 00:54:47,224 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-10-15 00:54:47,224 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-10-15 00:54:47,224 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-10-15 00:54:47,224 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-10-15 00:54:47,224 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-10-15 00:54:47,224 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-10-15 00:54:47,224 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-10-15 00:54:47,224 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-10-15 00:54:47,224 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-10-15 00:54:47,224 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-10-15 00:54:47,224 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-10-15 00:54:47,224 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-10-15 00:54:47,224 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-10-15 00:54:47,224 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-10-15 00:54:47,224 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-10-15 00:54:47,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:54:47,357 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-15 00:54:47,395 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:47,395 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:47,401 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:54:47,439 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-15 00:54:47,446 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6b02225b0> has no local changes 2024-10-15 00:54:47,446 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#212 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/)' 2024-10-15 00:54:47,455 [ scc.git] DEBUG [detached HEAD 58e4386] merge master -Dorg -Ssuccess-only 2024-10-15 00:54:47,455 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:54:47,455 [ scc.repo] DEBUG ## PRs found: 2024-10-15 00:54:47,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-10-15 00:54:47,757 [ scc.repo] DEBUG ## Branches found: 2024-10-15 00:54:47,757 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-15 00:54:47,757 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:47,757 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:47,763 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-15 00:54:47,768 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-15 00:54:47,768 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-15 00:54:47,773 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-15 00:54:47,778 [ scc.git] DEBUG Already up to date. 2024-10-15 00:54:47,778 [ scc.git] DEBUG ## Unique users: [] 2024-10-15 00:54:47,779 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:47,779 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:47,783 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-15 00:54:47,821 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:47,821 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:47,826 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:54:47,864 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-15 00:54:47,871 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6b01dc2e0> has no local changes 2024-10-15 00:54:47,871 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#212 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/)' 2024-10-15 00:54:47,880 [ scc.git] DEBUG [detached HEAD b0206c0] merge master -Dorg -Ssuccess-only 2024-10-15 00:54:47,881 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:54:47,881 [ scc.repo] DEBUG ## PRs found: 2024-10-15 00:54:48,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-10-15 00:54:48,162 [ scc.repo] DEBUG ## Branches found: 2024-10-15 00:54:48,162 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-15 00:54:48,162 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:48,163 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:48,170 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-15 00:54:48,175 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-15 00:54:48,175 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-15 00:54:48,180 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-15 00:54:48,186 [ scc.git] DEBUG Already up to date. 2024-10-15 00:54:48,186 [ scc.git] DEBUG ## Unique users: [] 2024-10-15 00:54:48,186 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:48,186 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:48,190 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-15 00:54:48,228 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:48,228 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:48,234 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:54:48,273 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-15 00:54:48,279 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6b01865b0> has no local changes 2024-10-15 00:54:48,279 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#212 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/)' 2024-10-15 00:54:48,287 [ scc.git] DEBUG [detached HEAD 5c036c4] merge master -Dorg -Ssuccess-only 2024-10-15 00:54:48,287 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:54:48,287 [ scc.git] INFO Overriding base-branch from master to main 2024-10-15 00:54:48,288 [ scc.repo] DEBUG ## PRs found: 2024-10-15 00:54:48,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-10-15 00:54:49,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-10-15 00:54:49,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-10-15 00:54:49,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-10-15 00:54:50,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-10-15 00:54:50,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:54:51,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-10-15 00:54:51,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:54:51,841 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-10-15 00:54:51,841 [ scc.repo] DEBUG ## Branches found: 2024-10-15 00:54:51,841 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-15 00:54:51,841 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:51,841 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:51,848 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-10-15 00:54:51,853 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-15 00:54:51,854 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-10-15 00:54:51,859 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-10-15 00:54:51,864 [ scc.git] DEBUG Already up to date. 2024-10-15 00:54:51,864 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-10-15 00:54:52,221 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-10-15 00:54:52,221 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-10-15 00:54:52,226 [ scc.git] DEBUG ## Unique users: [] 2024-10-15 00:54:52,226 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:52,226 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:52,231 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-15 00:54:52,237 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:52,243 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-15 00:54:52,267 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-10-15 00:54:52,267 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-10-15 00:54:52,267 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-15 00:54:52,268 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-15 00:54:52,275 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-10-15 00:54:52,281 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-10-15 00:54:52,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:54:52,419 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-15 00:54:52,425 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-10-15 00:54:52,430 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#212](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-10-15 00:54:52,436 [ scc.config] DEBUG Found github.token 2024-10-15 00:54:52,436 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-10-15 00:54:52,436 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-15 00:54:52,473 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:52,473 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:52,478 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:54:52,512 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-15 00:54:52,518 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6b01bbeb0> has no local changes 2024-10-15 00:54:52,518 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#212 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/)' 2024-10-15 00:54:52,526 [ scc.git] DEBUG [detached HEAD 00e0fbb] merge master -Dorg -Ssuccess-only 2024-10-15 00:54:52,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:54:52,526 [ scc.repo] DEBUG ## PRs found: 2024-10-15 00:54:52,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-10-15 00:54:52,860 [ scc.repo] DEBUG ## Branches found: 2024-10-15 00:54:52,860 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-15 00:54:52,860 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:52,860 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:52,867 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-15 00:54:52,872 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-15 00:54:52,872 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-15 00:54:52,877 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-15 00:54:52,882 [ scc.git] DEBUG Already up to date. 2024-10-15 00:54:52,882 [ scc.git] DEBUG ## Unique users: [] 2024-10-15 00:54:52,883 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:52,883 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:52,888 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-15 00:54:52,928 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:52,928 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:52,935 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:54:52,974 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-15 00:54:52,982 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6b01867f0> has no local changes 2024-10-15 00:54:52,982 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#212 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/)' 2024-10-15 00:54:52,990 [ scc.git] DEBUG [detached HEAD 3c4919f] merge master -Dorg -Ssuccess-only 2024-10-15 00:54:52,991 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:54:52,991 [ scc.repo] DEBUG ## PRs found: 2024-10-15 00:54:53,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-10-15 00:54:53,251 [ scc.repo] DEBUG ## Branches found: 2024-10-15 00:54:53,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-15 00:54:53,251 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:53,251 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:53,258 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-15 00:54:53,263 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-15 00:54:53,263 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-15 00:54:53,268 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-15 00:54:53,273 [ scc.git] DEBUG Already up to date. 2024-10-15 00:54:53,273 [ scc.git] DEBUG ## Unique users: [] 2024-10-15 00:54:53,273 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:53,273 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:53,277 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-15 00:54:53,316 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:53,316 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:53,321 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:54:53,359 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-15 00:54:53,365 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6b01a5c10> has no local changes 2024-10-15 00:54:53,365 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#212 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/)' 2024-10-15 00:54:53,373 [ scc.git] DEBUG [detached HEAD 97ef4fe] merge master -Dorg -Ssuccess-only 2024-10-15 00:54:53,373 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:54:53,373 [ scc.repo] DEBUG ## PRs found: 2024-10-15 00:54:53,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-10-15 00:54:54,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-10-15 00:54:54,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-10-15 00:54:55,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-10-15 00:54:55,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:54:56,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-10-15 00:54:56,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:54:56,407 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-10-15 00:54:56,408 [ scc.repo] DEBUG ## Branches found: 2024-10-15 00:54:56,408 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-15 00:54:56,408 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:56,408 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:56,415 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-15 00:54:56,420 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-15 00:54:56,421 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-15 00:54:56,427 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-15 00:54:56,432 [ scc.git] DEBUG Already up to date. 2024-10-15 00:54:56,433 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-10-15 00:54:56,877 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-10-15 00:54:56,877 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-10-15 00:54:56,881 [ scc.git] DEBUG ## Unique users: [] 2024-10-15 00:54:56,881 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:56,881 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:56,887 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-15 00:54:56,892 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:56,898 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-15 00:54:56,953 [ scc.git] DEBUG Auto-merging Dockerfile 2024-10-15 00:54:56,953 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-10-15 00:54:56,954 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-15 00:54:56,954 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-15 00:54:56,961 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-10-15 00:54:56,969 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-10-15 00:54:57,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:54:57,107 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-15 00:54:57,114 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-10-15 00:54:57,120 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#212](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-10-15 00:54:57,126 [ scc.config] DEBUG Found github.token 2024-10-15 00:54:57,126 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-10-15 00:54:57,126 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-15 00:54:57,167 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:54:57,167 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:54:57,173 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:54:57,213 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-15 00:54:57,221 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6b01a0fd0> has no local changes 2024-10-15 00:54:57,221 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#212 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/)' 2024-10-15 00:54:57,230 [ scc.git] DEBUG [detached HEAD facbe9b] merge master -Dorg -Ssuccess-only 2024-10-15 00:54:57,230 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:54:57,231 [ scc.git] INFO Overriding base-branch from master to develop 2024-10-15 00:54:57,231 [ scc.repo] DEBUG ## PRs found: 2024-10-15 00:54:57,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-10-15 00:54:58,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-10-15 00:54:58,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2024-10-15 00:54:59,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-10-15 00:54:59,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:54:59,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-15 00:55:00,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-10-15 00:55:00,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:55:00,790 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-10-15 00:55:01,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-10-15 00:55:01,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-10-15 00:55:02,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-10-15 00:55:02,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-10-15 00:55:03,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-10-15 00:55:03,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-10-15 00:55:04,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-10-15 00:55:04,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-15 00:55:04,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-10-15 00:55:05,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-10-15 00:55:05,282 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-10-15 00:55:05,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-10-15 00:55:06,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-10-15 00:55:06,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-10-15 00:55:07,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-10-15 00:55:07,184 [ scc.repo] DEBUG ## Branches found: 2024-10-15 00:55:07,184 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-15 00:55:07,184 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:55:07,184 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:55:07,191 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-10-15 00:55:07,196 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-15 00:55:07,196 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-10-15 00:55:07,201 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-10-15 00:55:07,206 [ scc.git] DEBUG Already up to date. 2024-10-15 00:55:07,207 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-10-15 00:55:08,007 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-10-15 00:55:08,008 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-10-15 00:55:08,013 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-10-15 00:55:08,497 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-10-15 00:55:08,498 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-10-15 00:55:08,502 [ scc.git] DEBUG ## Unique users: [] 2024-10-15 00:55:08,502 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:55:08,502 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:55:08,508 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-15 00:55:08,515 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:55:08,522 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-15 00:55:08,663 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-10-15 00:55:08,663 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-10-15 00:55:08,663 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-15 00:55:08,663 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-15 00:55:08,670 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-10-15 00:55:08,677 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-10-15 00:55:08,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:55:08,808 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-15 00:55:08,816 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-10-15 00:55:08,822 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#212](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-10-15 00:55:08,828 [ scc.config] DEBUG Found github.token 2024-10-15 00:55:08,828 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-10-15 00:55:08,828 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-10-15 00:55:08,834 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:55:08,840 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-10-15 00:55:08,853 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-15 00:55:08,855 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-10-15 00:55:08,855 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-10-15 00:55:09,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:55:09,195 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-15 00:55:09,235 [ scc.git] DEBUG Get sha1 of %s 2024-10-15 00:55:09,235 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-15 00:55:09,241 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:55:09,278 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-15 00:55:09,285 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6b0166520> has no local changes 2024-10-15 00:55:09,286 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#212 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/)' 2024-10-15 00:55:09,295 [ scc.git] DEBUG [detached HEAD b413913] merge master -Dorg -Ssuccess-only 2024-10-15 00:55:09,295 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:55:09,295 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-15 00:55:09,372 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-10-15 00:55:09,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:55:09,589 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-10-15 00:55:09,593 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-10-15 00:55:09,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:55:09,967 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-10-15 00:55:09,977 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-10-15 00:55:10,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:55:10,349 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-10-15 00:55:10,354 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-10-15 00:55:10,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:55:10,732 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-10-15 00:55:11,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:55:11,120 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-10-15 00:55:11,125 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-10-15 00:55:11,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:55:11,512 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-10-15 00:55:11,517 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-10-15 00:55:11,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:55:11,904 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-10-15 00:55:11,910 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-10-15 00:55:12,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:55:12,287 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-10-15 00:55:12,291 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-10-15 00:55:12,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:55:12,700 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-10-15 00:55:12,705 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-10-15 00:55:13,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:55:13,096 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-10-15 00:55:13,101 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-10-15 00:55:13,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:55:13,489 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-10-15 00:55:13,495 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-10-15 00:55:13,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:55:13,913 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-10-15 00:55:13,919 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-10-15 00:55:14,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:55:14,296 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-10-15 00:55:14,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:55:14,683 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-10-15 00:55:15,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:55:15,052 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-10-15 00:55:15,056 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-10-15 00:55:15,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:55:15,442 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-10-15 00:55:15,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:55:15,866 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-10-15 00:55:16,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:55:16,247 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-10-15 00:55:16,251 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-10-15 00:55:16,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:55:16,628 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-10-15 00:55:16,633 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-10-15 00:55:16,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:55:17,008 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-10-15 00:55:17,013 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-10-15 00:55:17,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:55:17,386 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-10-15 00:55:17,391 [ scc.config] DEBUG Found submodule.scripts.url 2024-10-15 00:55:17,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-15 00:55:17,765 [ scc.config] DEBUG Found submodule.scripts.branch 2024-10-15 00:55:17,765 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-15 00:55:17,842 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe6b3dc8fd0> has local changes 2024-10-15 00:55:17,842 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) - PR 596 Tom-TBT 'Dynamic lut for figure' (user: Tom-TBT) - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 577 Rdornier 'Fill rois' - PR 578 Rdornier 'Image outline' - PR 584 Rdornier 'Link url to image' - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 595 Rdornier 'Rotate image panel by 90°' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 486 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) - PR 485 Tom-TBT 'Dynamic LUT for iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' - PR 484 barrettMCW 'improved mirroring' Repository: ome/omero-mapr Excluded PRs: - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#212 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/212/)' 2024-10-15 00:55:17,860 [ scc.git] DEBUG [detached HEAD f8c05ce] merge master -Dorg -Ssuccess-only 2024-10-15 00:55:17,861 [ scc.merge] INFO Repository: ome/omero-plugins 2024-10-15 00:55:17,861 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-10-15 00:55:17,861 [ scc.merge] INFO Already up to date. 2024-10-15 00:55:17,861 [ scc.merge] INFO 2024-10-15 00:55:17,861 [ scc.merge] INFO Merged PRs: 2024-10-15 00:55:17,861 [ scc.merge] INFO - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' 2024-10-15 00:55:17,861 [ scc.merge] INFO 2024-10-15 00:55:17,861 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-10-15 00:55:17,861 [ scc.merge] INFO Already up to date. 2024-10-15 00:55:17,861 [ scc.merge] INFO 2024-10-15 00:55:17,861 [ scc.merge] INFO Merged PRs: 2024-10-15 00:55:17,861 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2' 2024-10-15 00:55:17,861 [ scc.merge] INFO 2024-10-15 00:55:17,861 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-10-15 00:55:17,861 [ scc.merge] INFO Excluded PRs: 2024-10-15 00:55:17,861 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-10-15 00:55:17,861 [ scc.merge] INFO Already up to date. 2024-10-15 00:55:17,861 [ scc.merge] INFO 2024-10-15 00:55:17,861 [ scc.merge] INFO Merged PRs: 2024-10-15 00:55:17,861 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-10-15 00:55:17,861 [ scc.merge] INFO 2024-10-15 00:55:17,861 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-10-15 00:55:17,861 [ scc.merge] INFO Excluded PRs: 2024-10-15 00:55:17,861 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-10-15 00:55:17,861 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-10-15 00:55:17,861 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-10-15 00:55:17,862 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-10-15 00:55:17,862 [ scc.merge] INFO Already up to date. 2024-10-15 00:55:17,862 [ scc.merge] INFO 2024-10-15 00:55:17,862 [ scc.merge] INFO Merged PRs: 2024-10-15 00:55:17,862 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-10-15 00:55:17,862 [ scc.merge] INFO 2024-10-15 00:55:17,862 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-10-15 00:55:17,862 [ scc.merge] INFO Excluded PRs: 2024-10-15 00:55:17,862 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-10-15 00:55:17,862 [ scc.merge] INFO Already up to date. 2024-10-15 00:55:17,862 [ scc.merge] INFO 2024-10-15 00:55:17,862 [ scc.merge] INFO Merged PRs: 2024-10-15 00:55:17,862 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-10-15 00:55:17,862 [ scc.merge] INFO 2024-10-15 00:55:17,862 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-15 00:55:17,862 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-10-15 00:55:17,862 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-10-15 00:55:17,862 [ scc.merge] INFO 2024-10-15 00:55:17,862 [ scc.merge] INFO Repository: ome/omero-figure 2024-10-15 00:55:17,862 [ scc.merge] INFO Excluded PRs: 2024-10-15 00:55:17,862 [ scc.merge] INFO - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) 2024-10-15 00:55:17,862 [ scc.merge] INFO - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) 2024-10-15 00:55:17,862 [ scc.merge] INFO - PR 596 Tom-TBT 'Dynamic lut for figure' (user: Tom-TBT) 2024-10-15 00:55:17,862 [ scc.merge] INFO - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) 2024-10-15 00:55:17,862 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-10-15 00:55:17,862 [ scc.merge] INFO Already up to date. 2024-10-15 00:55:17,862 [ scc.merge] INFO 2024-10-15 00:55:17,862 [ scc.merge] INFO Merged PRs: 2024-10-15 00:55:17,862 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' 2024-10-15 00:55:17,862 [ scc.merge] INFO - PR 578 Rdornier 'Image outline' 2024-10-15 00:55:17,862 [ scc.merge] INFO - PR 584 Rdornier 'Link url to image' 2024-10-15 00:55:17,862 [ scc.merge] INFO - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-10-15 00:55:17,862 [ scc.merge] INFO - PR 595 Rdornier 'Rotate image panel by 90°' 2024-10-15 00:55:17,862 [ scc.merge] INFO 2024-10-15 00:55:17,862 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-10-15 00:55:17,862 [ scc.merge] INFO Already up to date. 2024-10-15 00:55:17,862 [ scc.merge] INFO 2024-10-15 00:55:17,863 [ scc.merge] INFO Merged PRs: 2024-10-15 00:55:17,863 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-10-15 00:55:17,863 [ scc.merge] INFO 2024-10-15 00:55:17,863 [ scc.merge] INFO Repository: ome/omero-gallery 2024-10-15 00:55:17,863 [ scc.merge] INFO Already up to date. 2024-10-15 00:55:17,863 [ scc.merge] INFO 2024-10-15 00:55:17,863 [ scc.merge] INFO Merged PRs: 2024-10-15 00:55:17,863 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-10-15 00:55:17,863 [ scc.merge] INFO 2024-10-15 00:55:17,863 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-10-15 00:55:17,863 [ scc.merge] INFO Excluded PRs: 2024-10-15 00:55:17,863 [ scc.merge] INFO - PR 486 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) 2024-10-15 00:55:17,863 [ scc.merge] INFO - PR 485 Tom-TBT 'Dynamic LUT for iviewer' (user: Tom-TBT) 2024-10-15 00:55:17,863 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-10-15 00:55:17,863 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-10-15 00:55:17,863 [ scc.merge] INFO Already up to date. 2024-10-15 00:55:17,863 [ scc.merge] INFO 2024-10-15 00:55:17,863 [ scc.merge] INFO Merged PRs: 2024-10-15 00:55:17,863 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-10-15 00:55:17,863 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-10-15 00:55:17,863 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-10-15 00:55:17,863 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-10-15 00:55:17,863 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-10-15 00:55:17,863 [ scc.merge] INFO - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-10-15 00:55:17,863 [ scc.merge] INFO - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-10-15 00:55:17,863 [ scc.merge] INFO - PR 484 barrettMCW 'improved mirroring' 2024-10-15 00:55:17,863 [ scc.merge] INFO 2024-10-15 00:55:17,863 [ scc.merge] INFO Repository: ome/omero-mapr 2024-10-15 00:55:17,863 [ scc.merge] INFO Excluded PRs: 2024-10-15 00:55:17,863 [ scc.merge] INFO - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) 2024-10-15 00:55:17,863 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-10-15 00:55:17,863 [ scc.merge] INFO Already up to date. 2024-10-15 00:55:17,863 [ scc.merge] INFO 2024-10-15 00:55:17,863 [ scc.merge] INFO Merged PRs: 2024-10-15 00:55:17,863 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-10-15 00:55:17,863 [ scc.merge] INFO 2024-10-15 00:55:17,863 [ scc.merge] INFO Repository: ome/omero-metadata 2024-10-15 00:55:17,863 [ scc.merge] INFO Already up to date. 2024-10-15 00:55:17,864 [ scc.merge] INFO 2024-10-15 00:55:17,864 [ scc.merge] INFO Merged PRs: 2024-10-15 00:55:17,864 [ scc.merge] INFO - PR 86 dominikl 'Add tablename option' 2024-10-15 00:55:17,864 [ scc.merge] INFO 2024-10-15 00:55:17,864 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-15 00:55:17,864 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-10-15 00:55:17,864 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-10-15 00:55:17,864 [ scc.merge] INFO 2024-10-15 00:55:17,864 [ scc.merge] INFO Repository: ome/omero-parade 2024-10-15 00:55:17,864 [ scc.merge] INFO Excluded PRs: 2024-10-15 00:55:17,864 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-10-15 00:55:17,864 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-10-15 00:55:17,864 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-10-15 00:55:17,864 [ scc.merge] INFO Already up to date. 2024-10-15 00:55:17,864 [ scc.merge] INFO 2024-10-15 00:55:17,864 [ scc.merge] INFO Merged PRs: 2024-10-15 00:55:17,864 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-10-15 00:55:17,864 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-10-15 00:55:17,864 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-10-15 00:55:17,864 [ scc.merge] INFO 2024-10-15 00:55:17,864 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-10-15 00:55:17,864 [ scc.merge] INFO Already up to date. 2024-10-15 00:55:17,864 [ scc.merge] INFO 2024-10-15 00:55:17,864 [ scc.merge] INFO Merged PRs: 2024-10-15 00:55:17,864 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-10-15 00:55:17,864 [ scc.merge] INFO 2024-10-15 00:55:17,864 [ scc.merge] INFO Repository: ome/omero-rois 2024-10-15 00:55:17,864 [ scc.merge] INFO Excluded PRs: 2024-10-15 00:55:17,864 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-10-15 00:55:17,864 [ scc.merge] INFO Already up to date. 2024-10-15 00:55:17,864 [ scc.merge] INFO 2024-10-15 00:55:17,864 [ scc.merge] INFO Merged PRs: 2024-10-15 00:55:17,864 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-10-15 00:55:17,864 [ scc.merge] INFO 2024-10-15 00:55:17,864 [ scc.merge] INFO Repository: ome/omero-signup 2024-10-15 00:55:17,864 [ scc.merge] INFO Already up to date. 2024-10-15 00:55:17,864 [ scc.merge] INFO 2024-10-15 00:55:17,864 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-15 00:55:17,864 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-10-15 00:55:17,865 [ scc.merge] INFO 2024-10-15 00:55:17,865 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-10-15 00:55:17,865 [ scc.merge] INFO Already up to date. 2024-10-15 00:55:17,865 [ scc.merge] INFO 2024-10-15 00:55:17,865 [ scc.merge] INFO Merged PRs: 2024-10-15 00:55:17,865 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-10-15 00:55:17,865 [ scc.merge] INFO 2024-10-15 00:55:17,865 [ scc.merge] INFO Repository: ome/omero-upload 2024-10-15 00:55:17,865 [ scc.merge] INFO Already up to date. 2024-10-15 00:55:17,865 [ scc.merge] INFO 2024-10-15 00:55:17,865 [ scc.merge] INFO 2024-10-15 00:55:17,865 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-10-15 00:55:17,865 [ scc.merge] INFO Already up to date. 2024-10-15 00:55:17,865 [ scc.merge] INFO 2024-10-15 00:55:17,865 [ scc.merge] INFO 2024-10-15 00:55:17,865 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-10-15 00:55:17,865 [ scc.merge] INFO Excluded PRs: 2024-10-15 00:55:17,865 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-10-15 00:55:17,865 [ scc.merge] INFO Already up to date. 2024-10-15 00:55:17,865 [ scc.merge] INFO 2024-10-15 00:55:17,865 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-15 00:55:17,865 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-10-15 00:55:17,865 [ scc.merge] INFO 2024-10-15 00:55:17,865 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-10-15 00:55:17,865 [ scc.merge] INFO Already up to date. 2024-10-15 00:55:17,865 [ scc.merge] INFO 2024-10-15 00:55:17,865 [ scc.merge] INFO 2024-10-15 00:55:17,865 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-10-15 00:55:17,865 [ scc.merge] INFO Already up to date. 2024-10-15 00:55:17,865 [ scc.merge] INFO 2024-10-15 00:55:17,865 [ scc.merge] INFO 2024-10-15 00:55:17,865 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-10-15 00:55:17,865 [ scc.merge] INFO Already up to date. 2024-10-15 00:55:17,865 [ scc.merge] INFO 2024-10-15 00:55:17,865 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-15 00:55:17,865 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-10-15 00:55:17,865 [ scc.merge] INFO 2024-10-15 00:55:17,865 [ scc.merge] INFO Repository: ome/scripts 2024-10-15 00:55:17,866 [ scc.merge] INFO Excluded PRs: 2024-10-15 00:55:17,866 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-10-15 00:55:17,866 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-10-15 00:55:17,866 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-10-15 00:55:17,866 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-10-15 00:55:17,866 [ scc.merge] INFO Already up to date. 2024-10-15 00:55:17,866 [ scc.merge] INFO 2024-10-15 00:55:17,866 [ scc.merge] INFO Merged PRs: 2024-10-15 00:55:17,866 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-10-15 00:55:17,866 [ scc.merge] INFO 2024-10-15 00:55:17,866 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-15 00:55:17,866 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-10-15 00:55:17,866 [ scc.merge] INFO 2024-10-15 00:55:17,866 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-10-15 00:55:17,866 [ scc.git] DEBUG Calling 'git remote' 2024-10-15 00:55:17,871 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-15 00:55:17,871 [ scc.git] DEBUG Calling 'git remote' 2024-10-15 00:55:17,875 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:55:17,876 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-15 00:55:17,876 [ scc.git] DEBUG Calling 'git remote' 2024-10-15 00:55:17,880 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:55:17,880 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-15 00:55:17,880 [ scc.git] DEBUG Calling 'git remote' 2024-10-15 00:55:17,886 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:55:17,886 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-15 00:55:17,886 [ scc.git] DEBUG Calling 'git remote' 2024-10-15 00:55:17,891 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:55:17,891 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-15 00:55:17,891 [ scc.git] DEBUG Calling 'git remote' 2024-10-15 00:55:17,897 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:55:17,897 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-15 00:55:17,897 [ scc.git] DEBUG Calling 'git remote' 2024-10-15 00:55:17,902 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:55:17,903 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-15 00:55:17,903 [ scc.git] DEBUG Calling 'git remote' 2024-10-15 00:55:17,908 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:55:17,908 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-15 00:55:17,908 [ scc.git] DEBUG Calling 'git remote' 2024-10-15 00:55:17,915 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:55:17,916 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-15 00:55:17,916 [ scc.git] DEBUG Calling 'git remote' 2024-10-15 00:55:17,921 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:55:17,921 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-15 00:55:17,921 [ scc.git] DEBUG Calling 'git remote' 2024-10-15 00:55:17,926 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:55:17,926 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-15 00:55:17,926 [ scc.git] DEBUG Calling 'git remote' 2024-10-15 00:55:17,931 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:55:17,931 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-15 00:55:17,931 [ scc.git] DEBUG Calling 'git remote' 2024-10-15 00:55:17,937 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:55:17,937 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-15 00:55:17,937 [ scc.git] DEBUG Calling 'git remote' 2024-10-15 00:55:17,942 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:55:17,943 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-15 00:55:17,943 [ scc.git] DEBUG Calling 'git remote' 2024-10-15 00:55:17,947 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:55:17,947 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-15 00:55:17,948 [ scc.git] DEBUG Calling 'git remote' 2024-10-15 00:55:17,952 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:55:17,952 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-15 00:55:17,952 [ scc.git] DEBUG Calling 'git remote' 2024-10-15 00:55:17,957 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:55:17,957 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-15 00:55:17,957 [ scc.git] DEBUG Calling 'git remote' 2024-10-15 00:55:17,961 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:55:17,962 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-15 00:55:17,962 [ scc.git] DEBUG Calling 'git remote' 2024-10-15 00:55:17,967 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:55:17,967 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-15 00:55:17,967 [ scc.git] DEBUG Calling 'git remote' 2024-10-15 00:55:17,973 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:55:17,973 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-15 00:55:17,973 [ scc.git] DEBUG Calling 'git remote' 2024-10-15 00:55:17,978 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:55:17,978 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-15 00:55:17,978 [ scc.git] DEBUG Calling 'git remote' 2024-10-15 00:55:17,984 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-15 00:55:17,984 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-15 00:55:17,984 [ scc.git] DEBUG Calling 'git remote' 2024-10-15 00:55:17,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.2 to 5.9.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 70e4b31] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 173cac0 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 1c0e5f95 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD 07b532c] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-15 00:56:04,241 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-15 00:56:12,784 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-15 00:56:15,151 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-15 00:56:19,501 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-15 00:57:00,361 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS