Started by upstream project "Trigger" build number 36 originally caused by: Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/e9d96de4efbb3e39a2ce24824e54985c7c2760a6ed46c5415ea0aa1fd1e18d41/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.52.0' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 33 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + tar -zxf - + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.1.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.1.2 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.9.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.34.2-py3-none-any.whl.metadata (4.8 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.13.0-py3-none-any.whl.metadata (3.4 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.16.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-49.0.0-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (4.3 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.1.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.5 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.9-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (41 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.18-py3-none-any.whl.metadata (6.1 kB) Collecting certifi>=2023.5.7 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.7.22-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.9.1-py3-none-any.whl (449 kB) Using cached pyjwt-2.13.0-py3-none-any.whl (31 kB) Using cached cryptography-49.0.0-cp311-abi3-manylinux_2_34_x86_64.whl (4.7 MB) Using cached cffi-2.1.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (217 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.34.2-py3-none-any.whl (73 kB) Using cached charset_normalizer-3.4.9-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (221 kB) Using cached idna-3.18-py3-none-any.whl (65 kB) Using cached certifi-2026.7.22-py3-none-any.whl (136 kB) Using cached typing_extensions-4.16.0-py3-none-any.whl (45 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.0-py3-none-any.whl (48 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.9.1 PyYAML-6.0.3 certifi-2026.7.22 cffi-2.1.0 charset_normalizer-3.4.9 cryptography-49.0.0 future-1.0.0 idna-3.18 pycparser-3.0 pyjwt-2.13.0 pynacl-1.6.2 requests-2.34.2 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.16.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-07-29 13:06:47,665 [ scc.config] DEBUG Found github.token 2026-07-29 13:06:47,667 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-07-29 13:06:47,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:06:48,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:06:48,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-07-29 13:06:48,812 [ scc.gh] DEBUG 5000 remaining from 5000 (Reset at 14:07 2026-07-29 13:06:48,812 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-29 13:06:48,826 [ scc.git] DEBUG Check current status 2026-07-29 13:06:48,826 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-29 13:06:48,848 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-07-29 13:06:48,849 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-29 13:06:49,144 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-07-29 13:06:49,211 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-07-29 13:06:49,268 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-07-29 13:06:49,316 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-07-29 13:06:49,387 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-07-29 13:06:49,442 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-07-29 13:06:49,507 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-07-29 13:06:49,576 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d46) 2026-07-29 13:06:49,632 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-07-29 13:06:49,684 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-07-29 13:06:49,736 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-07-29 13:06:49,792 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-07-29 13:06:49,863 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-07-29 13:06:49,916 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-07-29 13:06:49,980 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-07-29 13:06:50,029 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-07-29 13:06:50,106 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-07-29 13:06:50,160 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-07-29 13:06:50,218 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-07-29 13:06:50,287 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-07-29 13:06:50,349 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-07-29 13:06:50,386 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-07-29 13:06:50,399 [ scc.config] DEBUG Found remote.origin.url 2026-07-29 13:06:50,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-07-29 13:06:51,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-29 13:06:51,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-29 13:06:52,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-29 13:06:52,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-29 13:06:52,709 [ scc.git] DEBUG Resetting... 2026-07-29 13:06:52,709 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-07-29 13:06:53,450 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-07-29 13:06:53,451 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-07-29 13:06:55,384 [ scc.git] DEBUG Check current status 2026-07-29 13:06:55,384 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-29 13:06:55,407 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-07-29 13:06:55,408 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-29 13:06:55,683 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-07-29 13:06:55,733 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-07-29 13:06:55,784 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-07-29 13:06:55,833 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-07-29 13:06:55,891 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-07-29 13:06:55,944 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-07-29 13:06:56,002 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-07-29 13:06:56,078 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d46) 2026-07-29 13:06:56,139 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-07-29 13:06:56,221 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-07-29 13:06:56,286 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-07-29 13:06:56,343 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-07-29 13:06:56,395 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-07-29 13:06:56,443 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-07-29 13:06:56,490 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-07-29 13:06:56,543 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-07-29 13:06:56,598 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-07-29 13:06:56,650 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-07-29 13:06:56,714 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-07-29 13:06:56,776 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-07-29 13:06:56,855 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-07-29 13:06:56,901 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-07-29 13:06:56,902 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-07-29 13:06:56,902 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-07-29 13:06:56,902 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-07-29 13:06:56,902 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-07-29 13:06:56,902 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-07-29 13:06:56,902 [ scc.repo] DEBUG ## PRs found: 2026-07-29 13:06:57,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-07-29 13:06:57,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-07-29 13:06:57,755 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:06:57,755 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-07-29 13:06:58,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-07-29 13:06:58,335 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:06:58,335 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-07-29 13:06:58,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-07-29 13:06:58,839 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:06:58,839 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-07-29 13:06:58,839 [ scc.repo] DEBUG ## Branches found: 2026-07-29 13:06:58,840 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:06:58,840 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:06:58,855 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-29 13:06:58,878 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-29 13:06:58,878 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-29 13:06:58,902 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-29 13:06:58,957 [ scc.git] DEBUG Already up to date. 2026-07-29 13:06:58,958 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-07-29 13:06:59,458 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-07-29 13:06:59,459 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-07-29 13:06:59,500 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-07-29 13:07:00,214 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-07-29 13:07:00,214 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-07-29 13:07:00,246 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-07-29 13:07:00,706 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-07-29 13:07:00,706 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-07-29 13:07:00,732 [ scc.git] DEBUG ## Unique users: [] 2026-07-29 13:07:00,732 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:07:00,732 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:07:00,748 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-07-29 13:07:00,779 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:07:00,793 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-07-29 13:07:01,736 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:07:01,792 [ scc.git] DEBUG scripts | 2 +- 2026-07-29 13:07:01,792 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-29 13:07:02,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:07:02,058 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-07-29 13:07:02,109 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:07:02,126 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-07-29 13:07:03,014 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:07:03,077 [ scc.git] DEBUG omero-figure | 2 +- 2026-07-29 13:07:03,077 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-29 13:07:03,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:07:03,292 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-07-29 13:07:03,329 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:07:03,350 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-07-29 13:07:04,316 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:07:04,389 [ scc.git] DEBUG omero-iviewer | 2 +- 2026-07-29 13:07:04,389 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-29 13:07:04,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:07:04,594 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-29 13:07:05,591 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-07-29 13:07:06,613 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-07-29 13:07:06,942 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-07-29 13:07:06,943 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:07:06,943 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:07:06,954 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-29 13:07:09,724 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fb1f9eb9a50> has no local changes 2026-07-29 13:07:09,724 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#22 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/)' 2026-07-29 13:07:11,350 [ scc.git] DEBUG [detached HEAD 6a7a135] merge master -Dorg -Snone 2026-07-29 13:07:11,352 [ scc.merge] INFO Repository: ome/omero-plugins 2026-07-29 13:07:11,352 [ scc.merge] INFO Already up to date. 2026-07-29 13:07:11,352 [ scc.merge] INFO 2026-07-29 13:07:11,352 [ scc.merge] INFO Merged PRs: 2026-07-29 13:07:11,352 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-07-29 13:07:11,352 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-07-29 13:07:11,352 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-07-29 13:07:11,352 [ scc.merge] INFO 2026-07-29 13:07:11,352 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-07-29 13:07:11,352 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' Submodule path 'omero-cli-zarr': checked out '9f844b877d8e19e42a69d7ba43f7dc086680fbec' Submodule path 'omero-figure': checked out '188872793f83c8a30a4cda1d0db1412c61401c00' From https://github.com/ome/omero-iviewer * [new branch] dependabot/npm_and_yarn/body-parser-1.20.6 -> origin/dependabot/npm_and_yarn/body-parser-1.20.6 Submodule path 'omero-iviewer': checked out 'cae0b0260125ca856c05b4ac7d723879827a6e76' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-rois': checked out 'fc9ff96901ce7b92e3ba51327ba7ba64fff76959' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2026-07-29 13:07:37,600 [ scc.config] DEBUG Found github.token 2026-07-29 13:07:37,603 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-07-29 13:07:37,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:07:38,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:07:38,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-07-29 13:07:38,734 [ scc.gh] DEBUG 4997 remaining from 5000 (Reset at 14:07 2026-07-29 13:07:38,734 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-29 13:07:38,748 [ scc.git] DEBUG Check current status 2026-07-29 13:07:38,748 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-29 13:07:38,776 [ scc.git] DEBUG 6a7a135 merge master -Dorg -Snone 2026-07-29 13:07:38,777 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-29 13:07:39,056 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-07-29 13:07:39,114 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-07-29 13:07:39,171 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2026-07-29 13:07:39,223 [ scc.git] DEBUG +9f844b877d8e19e42a69d7ba43f7dc086680fbec omero-cli-zarr (v0.8.0-1-g9f844b8) 2026-07-29 13:07:39,292 [ scc.git] DEBUG +188872793f83c8a30a4cda1d0db1412c61401c00 omero-figure (v8.0.1.rc2-14-g18887279) 2026-07-29 13:07:39,352 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-07-29 13:07:39,428 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-07-29 13:07:39,533 [ scc.git] DEBUG +cae0b0260125ca856c05b4ac7d723879827a6e76 omero-iviewer (v0.17.0-3-gcae0b026) 2026-07-29 13:07:39,624 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-07-29 13:07:39,711 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2026-07-29 13:07:39,792 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-07-29 13:07:39,872 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-07-29 13:07:39,962 [ scc.git] DEBUG +fc9ff96901ce7b92e3ba51327ba7ba64fff76959 omero-rois (v0.4.1-1-gfc9ff96) 2026-07-29 13:07:40,033 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-07-29 13:07:40,113 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2026-07-29 13:07:40,201 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-07-29 13:07:40,297 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2026-07-29 13:07:40,397 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2026-07-29 13:07:40,498 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-07-29 13:07:40,575 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-07-29 13:07:40,691 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-07-29 13:07:40,740 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 scripts (v5.10.0-1-g5b4d768) 2026-07-29 13:07:40,754 [ scc.config] DEBUG Found remote.origin.url 2026-07-29 13:07:40,754 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-07-29 13:07:40,757 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2026-07-29 13:07:41,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-07-29 13:07:41,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-29 13:07:42,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-29 13:07:42,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-29 13:07:43,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-29 13:07:43,075 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:07:43,342 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-07-29 13:07:43,342 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-29 13:07:43,358 [ scc.git] DEBUG Check current status 2026-07-29 13:07:43,358 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-29 13:07:43,388 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2026-07-29 13:07:43,389 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-29 13:07:43,565 [ scc.config] DEBUG Found remote.origin.url 2026-07-29 13:07:43,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2026-07-29 13:07:44,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-29 13:07:44,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-29 13:07:45,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-29 13:07:45,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-29 13:07:45,892 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:07:46,051 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:07:46,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-07-29 13:07:46,052 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-29 13:07:46,066 [ scc.git] DEBUG Check current status 2026-07-29 13:07:46,066 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-29 13:07:46,088 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2026-07-29 13:07:46,090 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-29 13:07:46,255 [ scc.config] DEBUG Found remote.origin.url 2026-07-29 13:07:46,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2026-07-29 13:07:47,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-29 13:07:47,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-29 13:07:48,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-29 13:07:48,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-29 13:07:48,534 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:07:48,705 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:07:48,705 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-07-29 13:07:48,706 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-29 13:07:48,730 [ scc.git] DEBUG Check current status 2026-07-29 13:07:48,730 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-29 13:07:48,771 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2026-07-29 13:07:48,773 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-29 13:07:48,998 [ scc.config] DEBUG Found remote.origin.url 2026-07-29 13:07:49,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2026-07-29 13:07:49,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-29 13:07:50,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-29 13:07:50,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-29 13:07:51,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-29 13:07:51,278 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:07:51,446 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:07:51,446 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-07-29 13:07:51,447 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-29 13:07:51,466 [ scc.git] DEBUG Check current status 2026-07-29 13:07:51,466 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-29 13:07:51,501 [ scc.git] DEBUG 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-07-29 13:07:51,502 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-29 13:07:51,706 [ scc.config] DEBUG Found remote.origin.url 2026-07-29 13:07:52,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2026-07-29 13:07:52,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-29 13:07:53,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-29 13:07:53,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-29 13:07:54,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-29 13:07:54,024 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:07:54,287 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:07:54,288 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-07-29 13:07:54,288 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-29 13:07:54,319 [ scc.git] DEBUG Check current status 2026-07-29 13:07:54,319 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-29 13:07:54,368 [ scc.git] DEBUG 18887279 Merge pull request #693 from ome/dependabot/npm_and_yarn/dompurify-3.4.9 2026-07-29 13:07:54,369 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-29 13:07:54,678 [ scc.config] DEBUG Found remote.origin.url 2026-07-29 13:07:54,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2026-07-29 13:07:55,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-29 13:07:55,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-29 13:07:56,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-29 13:07:56,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-29 13:07:56,901 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:07:57,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:07:57,053 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-07-29 13:07:57,053 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-29 13:07:57,070 [ scc.git] DEBUG Check current status 2026-07-29 13:07:57,070 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-29 13:07:57,092 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2026-07-29 13:07:57,093 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-29 13:07:57,277 [ scc.config] DEBUG Found remote.origin.url 2026-07-29 13:07:57,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2026-07-29 13:07:58,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-29 13:07:58,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-29 13:07:59,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-29 13:07:59,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-29 13:07:59,714 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:07:59,921 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:07:59,922 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-07-29 13:07:59,922 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-29 13:07:59,948 [ scc.git] DEBUG Check current status 2026-07-29 13:07:59,949 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-29 13:07:59,986 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2026-07-29 13:07:59,987 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-29 13:08:00,144 [ scc.config] DEBUG Found remote.origin.url 2026-07-29 13:08:00,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2026-07-29 13:08:00,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-29 13:08:01,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-29 13:08:01,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-29 13:08:02,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-29 13:08:02,374 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:08:02,625 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:08:02,626 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-07-29 13:08:02,626 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-29 13:08:02,648 [ scc.git] DEBUG Check current status 2026-07-29 13:08:02,648 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-29 13:08:02,685 [ scc.git] DEBUG cae0b026 Merge pull request #534 from will-moore/fix_docs_settings_link 2026-07-29 13:08:02,689 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-29 13:08:02,945 [ scc.config] DEBUG Found remote.origin.url 2026-07-29 13:08:03,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2026-07-29 13:08:03,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-29 13:08:04,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-29 13:08:04,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-29 13:08:05,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-29 13:08:05,166 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:08:05,312 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:08:05,312 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-07-29 13:08:05,313 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-29 13:08:05,329 [ scc.git] DEBUG Check current status 2026-07-29 13:08:05,329 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-29 13:08:05,355 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2026-07-29 13:08:05,356 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-29 13:08:05,509 [ scc.config] DEBUG Found remote.origin.url 2026-07-29 13:08:05,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2026-07-29 13:08:06,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-29 13:08:06,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-29 13:08:07,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-29 13:08:07,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-29 13:08:07,755 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:08:07,880 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:08:07,880 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-07-29 13:08:07,880 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-29 13:08:07,898 [ scc.git] DEBUG Check current status 2026-07-29 13:08:07,898 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-29 13:08:07,932 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-07-29 13:08:07,933 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-29 13:08:08,090 [ scc.config] DEBUG Found remote.origin.url 2026-07-29 13:08:08,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2026-07-29 13:08:08,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-29 13:08:09,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-29 13:08:09,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-29 13:08:10,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-29 13:08:10,335 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:08:10,504 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:08:10,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-07-29 13:08:10,505 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-29 13:08:10,528 [ scc.git] DEBUG Check current status 2026-07-29 13:08:10,528 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-29 13:08:10,571 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2026-07-29 13:08:10,573 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-29 13:08:10,770 [ scc.config] DEBUG Found remote.origin.url 2026-07-29 13:08:11,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2026-07-29 13:08:11,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-29 13:08:12,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-29 13:08:12,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-29 13:08:12,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-29 13:08:12,959 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:08:13,113 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:08:13,114 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-07-29 13:08:13,114 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-29 13:08:13,130 [ scc.git] DEBUG Check current status 2026-07-29 13:08:13,130 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-29 13:08:13,156 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2026-07-29 13:08:13,157 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-29 13:08:13,344 [ scc.config] DEBUG Found remote.origin.url 2026-07-29 13:08:13,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2026-07-29 13:08:14,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-29 13:08:14,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-29 13:08:15,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-29 13:08:15,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-29 13:08:15,618 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:08:15,738 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:08:15,739 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-07-29 13:08:15,739 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-29 13:08:15,757 [ scc.git] DEBUG Check current status 2026-07-29 13:08:15,757 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-29 13:08:15,780 [ scc.git] DEBUG fc9ff96 Bump version: 0.4.1 → 0.4.2.dev0 2026-07-29 13:08:15,782 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-29 13:08:15,921 [ scc.config] DEBUG Found remote.origin.url 2026-07-29 13:08:16,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2026-07-29 13:08:16,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-29 13:08:17,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-29 13:08:17,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-29 13:08:18,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-29 13:08:18,153 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:08:18,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:08:18,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-07-29 13:08:18,342 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-29 13:08:18,359 [ scc.git] DEBUG Check current status 2026-07-29 13:08:18,359 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-29 13:08:18,405 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2026-07-29 13:08:18,407 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-29 13:08:18,646 [ scc.config] DEBUG Found remote.origin.url 2026-07-29 13:08:18,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2026-07-29 13:08:19,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-29 13:08:19,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-29 13:08:20,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-29 13:08:20,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-29 13:08:20,801 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:08:20,939 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:08:20,939 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-07-29 13:08:20,940 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-29 13:08:20,956 [ scc.git] DEBUG Check current status 2026-07-29 13:08:20,956 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-29 13:08:20,980 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2026-07-29 13:08:20,981 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-29 13:08:21,132 [ scc.config] DEBUG Found remote.origin.url 2026-07-29 13:08:21,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-07-29 13:08:21,352 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-07-29 13:08:21,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2026-07-29 13:08:22,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-29 13:08:22,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-29 13:08:23,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-29 13:08:23,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-29 13:08:23,605 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:08:23,771 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:08:23,772 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-07-29 13:08:23,772 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-29 13:08:23,797 [ scc.git] DEBUG Check current status 2026-07-29 13:08:23,797 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-29 13:08:23,844 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2026-07-29 13:08:23,845 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-29 13:08:24,081 [ scc.config] DEBUG Found remote.origin.url 2026-07-29 13:08:24,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2026-07-29 13:08:25,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-29 13:08:25,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-29 13:08:25,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-29 13:08:26,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-29 13:08:26,360 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:08:26,515 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:08:26,515 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-07-29 13:08:26,516 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-29 13:08:26,529 [ scc.git] DEBUG Check current status 2026-07-29 13:08:26,529 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-29 13:08:26,548 [ scc.git] DEBUG 160d894 Fix display of code 2026-07-29 13:08:26,549 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-29 13:08:26,726 [ scc.config] DEBUG Found remote.origin.url 2026-07-29 13:08:27,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2026-07-29 13:08:27,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-29 13:08:28,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-29 13:08:28,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-29 13:08:28,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-29 13:08:28,951 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:08:29,082 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:08:29,082 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-07-29 13:08:29,083 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-29 13:08:29,111 [ scc.git] DEBUG Check current status 2026-07-29 13:08:29,111 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-29 13:08:29,139 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-07-29 13:08:29,140 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-29 13:08:29,265 [ scc.config] DEBUG Found remote.origin.url 2026-07-29 13:08:29,265 [ scc.git] DEBUG Repository configuration: base-branch: main 2026-07-29 13:08:29,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2026-07-29 13:08:30,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-29 13:08:30,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-29 13:08:31,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-29 13:08:31,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-29 13:08:31,524 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:08:31,724 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:08:31,724 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-07-29 13:08:31,725 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-29 13:08:31,754 [ scc.git] DEBUG Check current status 2026-07-29 13:08:31,754 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-29 13:08:31,801 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2026-07-29 13:08:31,814 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-29 13:08:32,017 [ scc.config] DEBUG Found remote.origin.url 2026-07-29 13:08:32,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-07-29 13:08:32,235 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-07-29 13:08:32,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2026-07-29 13:08:33,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-29 13:08:33,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-29 13:08:34,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-29 13:08:34,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-29 13:08:34,476 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:08:34,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:08:34,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-07-29 13:08:34,619 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-29 13:08:34,637 [ scc.git] DEBUG Check current status 2026-07-29 13:08:34,637 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-29 13:08:34,662 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2026-07-29 13:08:34,663 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-29 13:08:34,831 [ scc.config] DEBUG Found remote.origin.url 2026-07-29 13:08:35,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-07-29 13:08:35,034 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-07-29 13:08:35,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2026-07-29 13:08:35,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-29 13:08:36,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-29 13:08:36,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-29 13:08:37,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-29 13:08:37,261 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:08:37,403 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:08:37,403 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-07-29 13:08:37,404 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-29 13:08:37,436 [ scc.git] DEBUG Check current status 2026-07-29 13:08:37,436 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-29 13:08:37,466 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2026-07-29 13:08:37,467 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-29 13:08:37,626 [ scc.config] DEBUG Found remote.origin.url 2026-07-29 13:08:37,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2026-07-29 13:08:38,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-29 13:08:38,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-29 13:08:39,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-29 13:08:39,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-29 13:08:39,809 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:08:40,101 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:08:40,102 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-07-29 13:08:40,102 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-29 13:08:40,128 [ scc.git] DEBUG Check current status 2026-07-29 13:08:40,128 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-29 13:08:40,168 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0 2026-07-29 13:08:40,170 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-29 13:08:40,393 [ scc.config] DEBUG Found remote.origin.url 2026-07-29 13:08:40,393 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-07-29 13:08:40,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-07-29 13:08:40,624 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-07-29 13:08:40,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2026-07-29 13:08:41,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-29 13:08:41,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-29 13:08:42,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-29 13:08:42,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-29 13:08:42,867 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:08:43,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:08:43,010 [ scc.git] DEBUG Resetting... 2026-07-29 13:08:43,010 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-07-29 13:08:43,598 [ scc.git] DEBUG HEAD is now at 6a7a135 merge master -Dorg -Snone 2026-07-29 13:08:43,599 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-07-29 13:08:44,134 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2026-07-29 13:08:44,580 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2026-07-29 13:08:45,797 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-07-29 13:08:46,596 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-07-29 13:08:46,971 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2026-07-29 13:08:47,630 [ scc.git] DEBUG Submodule path 'omero-rois': checked out 'bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9' 2026-07-29 13:08:48,156 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2026-07-29 13:08:48,710 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2026-07-29 13:08:49,091 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2026-07-29 13:08:49,917 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-07-29 13:08:49,962 [ scc.git] DEBUG Check current status 2026-07-29 13:08:49,962 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-29 13:08:50,002 [ scc.git] DEBUG 6a7a135 merge master -Dorg -Snone 2026-07-29 13:08:50,003 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-29 13:08:50,352 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-07-29 13:08:50,393 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-07-29 13:08:50,440 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-07-29 13:08:50,487 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-07-29 13:08:50,548 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2026-07-29 13:08:50,599 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-07-29 13:08:50,634 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-07-29 13:08:50,682 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798cee) 2026-07-29 13:08:50,734 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-07-29 13:08:50,783 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-07-29 13:08:50,840 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-07-29 13:08:50,882 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-07-29 13:08:50,934 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-07-29 13:08:50,984 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-07-29 13:08:51,045 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-07-29 13:08:51,097 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-07-29 13:08:51,136 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-07-29 13:08:51,173 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-07-29 13:08:51,226 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-07-29 13:08:51,273 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-07-29 13:08:51,340 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-07-29 13:08:51,366 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2026-07-29 13:08:51,367 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-07-29 13:08:51,367 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-07-29 13:08:51,367 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-07-29 13:08:51,367 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-07-29 13:08:51,367 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-07-29 13:08:51,367 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-07-29 13:08:51,367 [ scc.repo] DEBUG ## PRs found: 2026-07-29 13:08:51,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-07-29 13:08:52,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-07-29 13:08:52,204 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:08:52,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-07-29 13:08:53,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:08:53,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-07-29 13:08:54,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:08:54,460 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-07-29 13:08:55,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-07-29 13:08:55,025 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:08:55,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-07-29 13:08:56,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:08:56,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-07-29 13:08:57,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:08:57,247 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-07-29 13:08:57,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-07-29 13:08:57,775 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:08:58,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-07-29 13:08:59,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:08:59,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-07-29 13:09:00,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:09:00,010 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-07-29 13:09:00,010 [ scc.repo] DEBUG ## Branches found: 2026-07-29 13:09:00,010 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:09:00,010 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:09:00,021 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-29 13:09:00,038 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-29 13:09:00,038 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-29 13:09:00,076 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-29 13:09:00,151 [ scc.git] DEBUG Already up to date. 2026-07-29 13:09:00,152 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-07-29 13:09:00,594 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-07-29 13:09:00,594 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-07-29 13:09:00,624 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-07-29 13:09:01,064 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-07-29 13:09:01,065 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-07-29 13:09:01,090 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-07-29 13:09:01,736 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-07-29 13:09:01,736 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-07-29 13:09:01,763 [ scc.git] DEBUG ## Unique users: [] 2026-07-29 13:09:01,763 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:09:01,763 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:09:01,775 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-07-29 13:09:01,806 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:09:01,820 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-07-29 13:09:01,881 [ scc.git] DEBUG Already up to date. 2026-07-29 13:09:02,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:09:02,086 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-07-29 13:09:02,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:09:02,126 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-07-29 13:09:02,189 [ scc.git] DEBUG Already up to date. 2026-07-29 13:09:02,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:09:02,542 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-07-29 13:09:02,585 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:09:02,609 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-07-29 13:09:02,716 [ scc.git] DEBUG Already up to date. 2026-07-29 13:09:02,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:09:02,996 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-29 13:09:04,523 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:09:04,523 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:09:04,538 [ scc.repo] DEBUG ## PRs found: 2026-07-29 13:09:04,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2026-07-29 13:09:04,766 [ scc.repo] DEBUG ## Branches found: 2026-07-29 13:09:04,766 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-07-29 13:09:04,766 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:09:04,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:09:04,795 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-29 13:09:04,819 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-29 13:09:04,819 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-29 13:09:04,854 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-29 13:09:04,938 [ scc.git] DEBUG Already up to date. 2026-07-29 13:09:04,938 [ scc.git] DEBUG ## Unique users: [] 2026-07-29 13:09:04,939 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:09:04,939 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:09:04,977 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-29 13:09:05,114 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:09:05,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:09:05,131 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:09:05,312 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-29 13:09:05,391 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a652fedd0> has no local changes 2026-07-29 13:09:05,391 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#22 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/)' 2026-07-29 13:09:05,553 [ scc.git] DEBUG [detached HEAD c624791] merge master -Dorg -Ssuccess-only 2026-07-29 13:09:05,557 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:09:05,557 [ scc.repo] DEBUG ## PRs found: 2026-07-29 13:09:05,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2026-07-29 13:09:06,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2026-07-29 13:09:06,447 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:09:07,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-07-29 13:09:07,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:09:08,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:09:08,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-07-29 13:09:09,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:09:09,305 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-29 13:09:09,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2026-07-29 13:09:10,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2026-07-29 13:09:10,312 [ scc.repo] DEBUG ## Branches found: 2026-07-29 13:09:10,312 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-07-29 13:09:10,312 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:09:10,312 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:09:10,338 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-29 13:09:10,367 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-29 13:09:10,367 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-29 13:09:10,404 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-29 13:09:10,489 [ scc.git] DEBUG Already up to date. 2026-07-29 13:09:10,489 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2026-07-29 13:09:10,971 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2026-07-29 13:09:10,971 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2026-07-29 13:09:11,008 [ scc.git] DEBUG ## Unique users: [] 2026-07-29 13:09:11,008 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:09:11,008 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:09:11,038 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-07-29 13:09:11,103 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:09:11,128 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-07-29 13:09:11,407 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:09:11,496 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-29 13:09:11,496 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-29 13:09:11,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:09:11,701 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-29 13:09:11,892 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:09:11,892 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:09:11,931 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:09:12,095 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-29 13:09:12,174 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a62d3cf50> has no local changes 2026-07-29 13:09:12,174 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#22 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/)' 2026-07-29 13:09:12,383 [ scc.git] DEBUG [detached HEAD 1f8b6ee] merge master -Dorg -Ssuccess-only 2026-07-29 13:09:12,385 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:09:12,386 [ scc.repo] DEBUG ## PRs found: 2026-07-29 13:09:12,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2026-07-29 13:09:13,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2026-07-29 13:09:13,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2026-07-29 13:09:14,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-07-29 13:09:14,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:09:15,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:09:15,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-07-29 13:09:16,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:09:16,497 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2026-07-29 13:09:17,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2026-07-29 13:09:17,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2026-07-29 13:09:17,551 [ scc.repo] DEBUG ## Branches found: 2026-07-29 13:09:17,551 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-07-29 13:09:17,551 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:09:17,551 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:09:17,570 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-29 13:09:17,596 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-29 13:09:17,596 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-29 13:09:17,624 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-29 13:09:17,820 [ scc.git] DEBUG Updating ce6e13c..68b7303 2026-07-29 13:09:18,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2026-07-29 13:09:19,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2026-07-29 13:09:20,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2026-07-29 13:09:21,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2026-07-29 13:09:21,056 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2026-07-29 13:09:21,772 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2026-07-29 13:09:21,772 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2026-07-29 13:09:21,802 [ scc.git] DEBUG ## Unique users: [] 2026-07-29 13:09:21,802 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:09:21,802 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:09:21,818 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-07-29 13:09:21,878 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:09:21,896 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-07-29 13:09:22,100 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2026-07-29 13:09:22,175 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:09:22,245 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2026-07-29 13:09:22,246 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2026-07-29 13:09:22,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:09:22,485 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-29 13:09:22,660 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:09:22,660 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:09:22,681 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:09:22,836 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-29 13:09:22,916 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a62cdbbd0> has no local changes 2026-07-29 13:09:22,916 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#22 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/)' 2026-07-29 13:09:23,115 [ scc.git] DEBUG [detached HEAD bb2c073] merge master -Dorg -Ssuccess-only 2026-07-29 13:09:23,117 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:09:23,117 [ scc.repo] DEBUG ## PRs found: 2026-07-29 13:09:23,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2026-07-29 13:09:24,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/196 HTTP/1.1" 200 None 2026-07-29 13:09:24,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f?page=1 HTTP/1.1" 200 None 2026-07-29 13:09:25,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:09:25,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:09:26,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f?page=1 HTTP/1.1" 200 None 2026-07-29 13:09:26,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/eeaeaa9e3789fce6809def20cd9a43f37f61668f?per_page=1 HTTP/1.1" 200 None 2026-07-29 13:09:27,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f?page=1 HTTP/1.1" 200 None 2026-07-29 13:09:27,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f/status HTTP/1.1" 200 None 2026-07-29 13:09:27,918 [ scc.repo] DEBUG - PR 196 will-moore 'Storage options only if needed' 2026-07-29 13:09:28,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/194 HTTP/1.1" 200 None 2026-07-29 13:09:28,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b?page=1 HTTP/1.1" 200 None 2026-07-29 13:09:29,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:09:30,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:09:30,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/193 HTTP/1.1" 200 None 2026-07-29 13:09:31,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-07-29 13:09:31,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:09:32,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:09:32,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-07-29 13:09:33,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?per_page=1 HTTP/1.1" 200 None 2026-07-29 13:09:33,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-07-29 13:09:34,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/status HTTP/1.1" 200 None 2026-07-29 13:09:34,289 [ scc.repo] DEBUG - PR 193 dominikl 'Only parse import uris if stated' 2026-07-29 13:09:34,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2026-07-29 13:09:35,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2026-07-29 13:09:35,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-07-29 13:09:36,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:09:37,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:09:37,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-07-29 13:09:38,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None 2026-07-29 13:09:38,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-07-29 13:09:38,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None 2026-07-29 13:09:38,990 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-07-29 13:09:39,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2026-07-29 13:09:40,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2026-07-29 13:09:40,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2026-07-29 13:09:41,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2026-07-29 13:09:41,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-07-29 13:09:42,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:09:43,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:09:43,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-07-29 13:09:44,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f99a6a6869bf6259376adaea157f24955c9aa3ae?per_page=1 HTTP/1.1" 200 None 2026-07-29 13:09:44,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-07-29 13:09:45,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/status HTTP/1.1" 200 None 2026-07-29 13:09:45,024 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-07-29 13:09:45,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2026-07-29 13:09:46,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2026-07-29 13:09:46,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-07-29 13:09:47,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:09:47,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:09:48,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-07-29 13:09:48,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2026-07-29 13:09:49,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-07-29 13:09:49,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2026-07-29 13:09:49,849 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2026-07-29 13:09:50,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2026-07-29 13:09:50,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2026-07-29 13:09:51,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2026-07-29 13:09:51,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2026-07-29 13:09:52,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2026-07-29 13:09:52,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2026-07-29 13:09:52,936 [ scc.repo] DEBUG ## Branches found: 2026-07-29 13:09:52,936 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-07-29 13:09:52,937 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:09:52,937 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:09:52,962 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-29 13:09:52,986 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-29 13:09:52,986 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-29 13:09:53,114 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-29 13:09:53,545 [ scc.git] DEBUG Updating 11d3587..9f844b8 2026-07-29 13:09:54,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/172 HTTP/1.1" 200 None 2026-07-29 13:09:55,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/192 HTTP/1.1" 200 None 2026-07-29 13:09:55,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/186 HTTP/1.1" 200 None 2026-07-29 13:09:56,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/187 HTTP/1.1" 200 None 2026-07-29 13:09:57,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2026-07-29 13:09:58,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2026-07-29 13:09:59,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2026-07-29 13:09:59,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2026-07-29 13:10:00,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2026-07-29 13:10:01,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2026-07-29 13:10:02,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2026-07-29 13:10:03,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2026-07-29 13:10:03,545 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2026-07-29 13:10:04,348 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-07-29 13:10:04,348 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2026-07-29 13:10:04,379 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2026-07-29 13:10:05,028 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-07-29 13:10:05,028 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2026-07-29 13:10:05,053 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2026-07-29 13:10:05,535 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-07-29 13:10:05,535 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2026-07-29 13:10:05,557 [ scc.git] DEBUG Calling 'git fetch origin pull/193/head' 2026-07-29 13:10:05,992 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-07-29 13:10:05,992 [ scc.git] DEBUG * branch refs/pull/193/head -> FETCH_HEAD 2026-07-29 13:10:06,012 [ scc.git] DEBUG Calling 'git fetch origin pull/196/head' 2026-07-29 13:10:06,528 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-07-29 13:10:06,528 [ scc.git] DEBUG * branch refs/pull/196/head -> FETCH_HEAD 2026-07-29 13:10:06,552 [ scc.git] DEBUG ## Unique users: [] 2026-07-29 13:10:06,552 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:10:06,552 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:10:06,566 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-07-29 13:10:06,625 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:10:06,638 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-07-29 13:10:07,117 [ scc.git] DEBUG Auto-merging README.rst 2026-07-29 13:10:07,117 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-07-29 13:10:07,118 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py 2026-07-29 13:10:07,118 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-07-29 13:10:07,118 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-07-29 13:10:07,118 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2026-07-29 13:10:07,118 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2026-07-29 13:10:07,118 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2026-07-29 13:10:07,118 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py 2026-07-29 13:10:07,118 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-07-29 13:10:07,118 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-07-29 13:10:07,145 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-29 13:10:07,146 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-29 13:10:07,187 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-07-29 13:10:07,407 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-07-29 13:10:07,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:10:07,614 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-07-29 13:10:07,667 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-07-29 13:10:07,701 [ scc.git] INFO - PR 174 will-moore 'Skip wells' Conflicting PR. Removed from build [OMERO-plugins-push#22](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/util.py - src/omero_zarr/raw_pixels.py - src/omero_zarr/cli.py - test/integration/clitest/test_export.py - src/omero_zarr/masks.py --conflicts 2026-07-29 13:10:07,715 [ scc.config] DEBUG Found github.token 2026-07-29 13:10:07,715 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts. 2026-07-29 13:10:07,715 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-07-29 13:10:07,789 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:10:07,801 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-07-29 13:10:08,062 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-07-29 13:10:08,062 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-07-29 13:10:08,062 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-07-29 13:10:08,062 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-07-29 13:10:08,084 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-29 13:10:08,085 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-29 13:10:08,127 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-07-29 13:10:08,301 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-07-29 13:10:08,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:10:08,479 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-07-29 13:10:08,518 [ scc.git] DEBUG Calling 'git diff --name-only 9530c10ba9823fcba6b39139987bf4bcd4a60179..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-07-29 13:10:08,544 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#22](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/consoleText) for more details. Possible conflicts: - PR #174 will-moore 'Skip wells' - test/integration/clitest/test_export.py - src/omero_zarr/masks.py - Upstream changes - test/integration/clitest/test_export.py - src/omero_zarr/masks.py --conflicts 2026-07-29 13:10:08,556 [ scc.config] DEBUG Found github.token 2026-07-29 13:10:08,556 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2026-07-29 13:10:08,556 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-07-29 13:10:08,599 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:10:08,612 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-07-29 13:10:08,884 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-07-29 13:10:08,884 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-07-29 13:10:08,884 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2026-07-29 13:10:08,884 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_import.py 2026-07-29 13:10:08,885 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_import.py 2026-07-29 13:10:08,907 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-29 13:10:08,907 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-29 13:10:08,943 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-07-29 13:10:09,104 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-07-29 13:10:09,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:10:09,311 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-07-29 13:10:09,347 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-07-29 13:10:09,369 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#22](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/consoleText) for more details. Possible conflicts: - Upstream changes - test/integration/clitest/test_import.py - src/omero_zarr/zarr_import.py --conflicts 2026-07-29 13:10:09,380 [ scc.config] DEBUG Found github.token 2026-07-29 13:10:09,380 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2026-07-29 13:10:09,380 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-07-29 13:10:09,409 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:10:09,421 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 193 (Only parse import uris if stated) bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-07-29 13:10:09,657 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:10:09,717 [ scc.git] DEBUG src/omero_zarr/cli.py | 8 ++++++++ 2026-07-29 13:10:09,717 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 40 +++++++++++++++++++++------------------- 2026-07-29 13:10:09,717 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 19 deletions(-) 2026-07-29 13:10:09,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:10:09,921 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eeaeaa9e3789fce6809def20cd9a43f37f61668f' 2026-07-29 13:10:09,974 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:10:09,989 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 196 (Storage options only if needed) eeaeaa9e3789fce6809def20cd9a43f37f61668f' 2026-07-29 13:10:10,221 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-07-29 13:10:10,290 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:10:10,383 [ scc.git] DEBUG .pre-commit-config.yaml | 2 +- 2026-07-29 13:10:10,383 [ scc.git] DEBUG src/omero_zarr/masks.py | 10 ++++++++++ 2026-07-29 13:10:10,383 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 6 ++---- 2026-07-29 13:10:10,383 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 3 ++- 2026-07-29 13:10:10,383 [ scc.git] DEBUG test/integration/clitest/test_export.py | 2 +- 2026-07-29 13:10:10,383 [ scc.git] DEBUG 5 files changed, 16 insertions(+), 7 deletions(-) 2026-07-29 13:10:10,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:10:10,596 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-29 13:10:10,746 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:10:10,746 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:10:10,767 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:10:10,912 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-29 13:10:11,007 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a6285c750> has no local changes 2026-07-29 13:10:11,007 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' - PR 196 will-moore 'Storage options only if needed' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#22 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/)' 2026-07-29 13:10:11,184 [ scc.git] DEBUG [detached HEAD 2fe722c] merge master -Dorg -Ssuccess-only 2026-07-29 13:10:11,186 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:10:11,186 [ scc.repo] DEBUG ## PRs found: 2026-07-29 13:10:11,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2026-07-29 13:10:12,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/696 HTTP/1.1" 200 None 2026-07-29 13:10:12,187 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:10:12,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/abde8720db39ce43974f7b5c8d717eb52472b226?page=1 HTTP/1.1" 200 None 2026-07-29 13:10:13,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/abde8720db39ce43974f7b5c8d717eb52472b226/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:10:14,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/abde8720db39ce43974f7b5c8d717eb52472b226/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:10:14,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/abde8720db39ce43974f7b5c8d717eb52472b226?page=1 HTTP/1.1" 200 None 2026-07-29 13:10:15,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/abde8720db39ce43974f7b5c8d717eb52472b226?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:10:15,120 [ scc.repo] DEBUG - PR 696 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.12' 2026-07-29 13:10:15,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/695 HTTP/1.1" 200 None 2026-07-29 13:10:15,637 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:10:16,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6a1c677b187fbe3fefabeebba659660e1c08dad8?page=1 HTTP/1.1" 200 None 2026-07-29 13:10:16,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6a1c677b187fbe3fefabeebba659660e1c08dad8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:10:17,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6a1c677b187fbe3fefabeebba659660e1c08dad8/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:10:18,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6a1c677b187fbe3fefabeebba659660e1c08dad8?page=1 HTTP/1.1" 200 None 2026-07-29 13:10:18,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6a1c677b187fbe3fefabeebba659660e1c08dad8?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:10:18,490 [ scc.repo] DEBUG - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' 2026-07-29 13:10:19,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/692 HTTP/1.1" 200 None 2026-07-29 13:10:19,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2?page=1 HTTP/1.1" 200 None 2026-07-29 13:10:20,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:10:20,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:10:21,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2?page=1 HTTP/1.1" 200 None 2026-07-29 13:10:21,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/123f30064dc116c09098786206e54f8ec811c2c2?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:10:21,748 [ scc.repo] DEBUG - PR 692 will-moore 'colorbar lut background fix' 2026-07-29 13:10:22,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None 2026-07-29 13:10:22,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652/comments HTTP/1.1" 200 None 2026-07-29 13:10:22,746 [ scc.repo] DEBUG # ... Include label: include 2026-07-29 13:10:23,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234?page=1 HTTP/1.1" 200 None 2026-07-29 13:10:23,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:10:24,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:10:24,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234?page=1 HTTP/1.1" 200 None 2026-07-29 13:10:25,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:10:25,467 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-07-29 13:10:25,467 [ scc.repo] DEBUG ## Branches found: 2026-07-29 13:10:25,468 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-07-29 13:10:25,468 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:10:25,469 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:10:25,493 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-29 13:10:25,515 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-29 13:10:25,515 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-29 13:10:25,625 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-29 13:10:27,128 [ scc.git] ERROR stderr (git merge --ff-only origin/master): Updating files: 95% (78/82) Updating files: 96% (79/82) Updating files: 97% (80/82) Updating files: 98% (81/82) Updating files: 100% (82/82) Updating files: 100% (82/82), done. 2026-07-29 13:10:27,128 [ scc.git] DEBUG Updating 9cc36cde..18887279 2026-07-29 13:10:27,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/693 HTTP/1.1" 200 None 2026-07-29 13:10:28,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/691 HTTP/1.1" 200 None 2026-07-29 13:10:29,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/686 HTTP/1.1" 200 None 2026-07-29 13:10:30,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/690 HTTP/1.1" 200 None 2026-07-29 13:10:31,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/681 HTTP/1.1" 200 None 2026-07-29 13:10:31,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/688 HTTP/1.1" 200 None 2026-07-29 13:10:32,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/685 HTTP/1.1" 200 None 2026-07-29 13:10:33,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/683 HTTP/1.1" 200 None 2026-07-29 13:10:34,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/680 HTTP/1.1" 200 None 2026-07-29 13:10:35,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/684 HTTP/1.1" 200 None 2026-07-29 13:10:36,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/682 HTTP/1.1" 200 None 2026-07-29 13:10:37,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/679 HTTP/1.1" 200 None 2026-07-29 13:10:37,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/677 HTTP/1.1" 200 None 2026-07-29 13:10:38,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/666 HTTP/1.1" 200 None 2026-07-29 13:10:39,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/676 HTTP/1.1" 200 None 2026-07-29 13:10:40,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/669 HTTP/1.1" 200 None 2026-07-29 13:10:41,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/662 HTTP/1.1" 200 None 2026-07-29 13:10:42,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/663 HTTP/1.1" 200 None 2026-07-29 13:10:43,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/674 HTTP/1.1" 200 None 2026-07-29 13:10:44,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/675 HTTP/1.1" 200 None 2026-07-29 13:10:44,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/671 HTTP/1.1" 200 None 2026-07-29 13:10:45,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/672 HTTP/1.1" 200 None 2026-07-29 13:10:46,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/667 HTTP/1.1" 200 None 2026-07-29 13:10:47,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/665 HTTP/1.1" 200 None 2026-07-29 13:10:48,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/656 HTTP/1.1" 200 None 2026-07-29 13:10:49,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/670 HTTP/1.1" 200 None 2026-07-29 13:10:50,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/664 HTTP/1.1" 200 None 2026-07-29 13:10:51,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/654 HTTP/1.1" 200 None 2026-07-29 13:10:51,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/648 HTTP/1.1" 200 None 2026-07-29 13:10:52,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/661 HTTP/1.1" 200 None 2026-07-29 13:10:53,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None 2026-07-29 13:10:54,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None 2026-07-29 13:10:55,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None 2026-07-29 13:10:56,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None 2026-07-29 13:10:57,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2026-07-29 13:10:58,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2026-07-29 13:10:59,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2026-07-29 13:11:00,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2026-07-29 13:11:01,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2026-07-29 13:11:02,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2026-07-29 13:11:02,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2026-07-29 13:11:03,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2026-07-29 13:11:04,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2026-07-29 13:11:05,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2026-07-29 13:11:06,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2026-07-29 13:11:07,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2026-07-29 13:11:08,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2026-07-29 13:11:09,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2026-07-29 13:11:10,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2026-07-29 13:11:11,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2026-07-29 13:11:11,149 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head' 2026-07-29 13:11:11,981 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-07-29 13:11:11,981 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD 2026-07-29 13:11:12,010 [ scc.git] DEBUG Calling 'git fetch origin pull/692/head' 2026-07-29 13:11:12,504 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-07-29 13:11:12,505 [ scc.git] DEBUG * branch refs/pull/692/head -> FETCH_HEAD 2026-07-29 13:11:12,539 [ scc.git] DEBUG Calling 'git fetch origin pull/695/head' 2026-07-29 13:11:12,992 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-07-29 13:11:12,992 [ scc.git] DEBUG * branch refs/pull/695/head -> FETCH_HEAD 2026-07-29 13:11:13,021 [ scc.git] DEBUG Calling 'git fetch origin pull/696/head' 2026-07-29 13:11:13,499 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-07-29 13:11:13,499 [ scc.git] DEBUG * branch refs/pull/696/head -> FETCH_HEAD 2026-07-29 13:11:13,535 [ scc.git] DEBUG ## Unique users: [] 2026-07-29 13:11:13,535 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:11:13,535 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:11:13,557 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-07-29 13:11:13,657 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:11:13,693 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-07-29 13:11:14,261 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-07-29 13:11:14,261 [ scc.git] DEBUG Auto-merging src/index.html 2026-07-29 13:11:14,261 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-07-29 13:11:14,366 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:11:14,445 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++- 2026-07-29 13:11:14,445 [ scc.git] DEBUG src/index.html | 11 ++ 2026-07-29 13:11:14,445 [ scc.git] DEBUG src/js/views/figure_view.js | 1 + 2026-07-29 13:11:14,445 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-) 2026-07-29 13:11:14,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:11:14,652 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...123f30064dc116c09098786206e54f8ec811c2c2' 2026-07-29 13:11:14,717 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:11:14,732 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 692 (colorbar lut background fix) 123f30064dc116c09098786206e54f8ec811c2c2' 2026-07-29 13:11:15,059 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:11:15,155 [ scc.git] DEBUG src/js/views/panel_view.js | 5 +++++ 2026-07-29 13:11:15,156 [ scc.git] DEBUG src/templates/colorbar.template.html | 2 +- 2026-07-29 13:11:15,156 [ scc.git] DEBUG 2 files changed, 6 insertions(+), 1 deletion(-) 2026-07-29 13:11:15,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:11:15,357 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a1c677b187fbe3fefabeebba659660e1c08dad8' 2026-07-29 13:11:15,451 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:11:15,475 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 695 (Bump immutable from 5.1.6 to 5.1.9) 6a1c677b187fbe3fefabeebba659660e1c08dad8' 2026-07-29 13:11:15,835 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:11:15,918 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-07-29 13:11:15,918 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-07-29 13:11:16,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:11:16,111 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...abde8720db39ce43974f7b5c8d717eb52472b226' 2026-07-29 13:11:16,183 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:11:16,199 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 696 (Bump dompurify from 3.4.9 to 3.4.12) abde8720db39ce43974f7b5c8d717eb52472b226' 2026-07-29 13:11:16,408 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-29 13:11:16,515 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:11:16,584 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2026-07-29 13:11:16,584 [ scc.git] DEBUG package.json | 2 +- 2026-07-29 13:11:16,584 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2026-07-29 13:11:16,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:11:16,795 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-29 13:11:16,964 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:11:16,964 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:11:16,984 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:11:17,155 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-29 13:11:17,326 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a629c5490> has no local changes 2026-07-29 13:11:17,327 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Updating 9cc36cde..18887279 Previously merged: - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' - PR 691 dependabot[bot] 'Bump esbuild and vite' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 692 will-moore 'colorbar lut background fix' - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' - PR 696 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.12' Generated by OMERO-plugins-push#22 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/)' 2026-07-29 13:11:17,539 [ scc.git] DEBUG [detached HEAD 0cecd2ff] merge master -Dorg -Ssuccess-only 2026-07-29 13:11:17,540 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:11:17,540 [ scc.repo] DEBUG ## PRs found: 2026-07-29 13:11:17,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2026-07-29 13:11:18,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2026-07-29 13:11:18,452 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:11:19,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-07-29 13:11:19,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:11:20,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:11:20,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-07-29 13:11:21,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:11:21,436 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-29 13:11:21,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2026-07-29 13:11:22,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2026-07-29 13:11:23,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-07-29 13:11:23,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:11:24,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-07-29 13:11:24,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:11:24,761 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2026-07-29 13:11:24,761 [ scc.repo] DEBUG ## Branches found: 2026-07-29 13:11:24,761 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-07-29 13:11:24,762 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:11:24,762 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:11:24,783 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-29 13:11:24,804 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-29 13:11:24,804 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-29 13:11:24,829 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-29 13:11:24,901 [ scc.git] DEBUG Already up to date. 2026-07-29 13:11:24,901 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2026-07-29 13:11:25,374 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-07-29 13:11:25,374 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2026-07-29 13:11:25,397 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2026-07-29 13:11:25,788 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-07-29 13:11:25,788 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2026-07-29 13:11:25,810 [ scc.git] DEBUG ## Unique users: [] 2026-07-29 13:11:25,810 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:11:25,810 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:11:25,823 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-07-29 13:11:25,855 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:11:25,870 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-07-29 13:11:26,006 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2026-07-29 13:11:26,072 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:11:26,137 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2026-07-29 13:11:26,137 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2026-07-29 13:11:26,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:11:26,332 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-07-29 13:11:26,370 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:11:26,391 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-07-29 13:11:26,594 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:11:26,673 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-29 13:11:26,673 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-29 13:11:26,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:11:26,857 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-29 13:11:26,986 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:11:26,986 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:11:27,001 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:11:27,121 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-29 13:11:27,180 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a652fee10> has no local changes 2026-07-29 13:11:27,180 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#22 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/)' 2026-07-29 13:11:27,340 [ scc.git] DEBUG [detached HEAD a171285] merge master -Dorg -Ssuccess-only 2026-07-29 13:11:27,342 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:11:27,342 [ scc.repo] DEBUG ## PRs found: 2026-07-29 13:11:27,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2026-07-29 13:11:28,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2026-07-29 13:11:28,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2026-07-29 13:11:29,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2026-07-29 13:11:29,274 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:11:30,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-07-29 13:11:30,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:11:31,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-07-29 13:11:31,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:11:31,557 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-07-29 13:11:32,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2026-07-29 13:11:32,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2026-07-29 13:11:33,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2026-07-29 13:11:33,164 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:11:33,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-07-29 13:11:34,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:11:34,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-07-29 13:11:35,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:11:35,323 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-07-29 13:11:35,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2026-07-29 13:11:35,836 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:11:36,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-07-29 13:11:37,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:11:37,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-07-29 13:11:38,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:11:38,112 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-07-29 13:11:38,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2026-07-29 13:11:38,665 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:11:39,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-07-29 13:11:39,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:11:40,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-07-29 13:11:40,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:11:40,821 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-07-29 13:11:41,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2026-07-29 13:11:41,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2026-07-29 13:11:41,840 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:11:42,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-07-29 13:11:43,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:11:43,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-07-29 13:11:44,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:11:44,000 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-07-29 13:11:44,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2026-07-29 13:11:44,628 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:11:45,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-07-29 13:11:45,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:11:46,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-07-29 13:11:46,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:11:46,773 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-07-29 13:11:47,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2026-07-29 13:11:47,282 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:11:47,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-07-29 13:11:48,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:11:49,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-07-29 13:11:49,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:11:49,523 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-07-29 13:11:49,523 [ scc.repo] DEBUG ## Branches found: 2026-07-29 13:11:49,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-07-29 13:11:49,524 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:11:49,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:11:49,542 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-29 13:11:49,565 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-29 13:11:49,565 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-29 13:11:49,587 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-29 13:11:49,643 [ scc.git] DEBUG Already up to date. 2026-07-29 13:11:49,643 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2026-07-29 13:11:50,080 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-07-29 13:11:50,080 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2026-07-29 13:11:50,104 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2026-07-29 13:11:50,522 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-07-29 13:11:50,522 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2026-07-29 13:11:50,548 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2026-07-29 13:11:50,950 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-07-29 13:11:50,950 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2026-07-29 13:11:50,985 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2026-07-29 13:11:51,385 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-07-29 13:11:51,385 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2026-07-29 13:11:51,408 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2026-07-29 13:11:51,800 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-07-29 13:11:51,800 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2026-07-29 13:11:51,825 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2026-07-29 13:11:52,247 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-07-29 13:11:52,247 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2026-07-29 13:11:52,270 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2026-07-29 13:11:52,671 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-07-29 13:11:52,671 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2026-07-29 13:11:52,693 [ scc.git] DEBUG ## Unique users: [] 2026-07-29 13:11:52,694 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:11:52,694 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:11:52,707 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-07-29 13:11:52,730 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:11:52,744 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-07-29 13:11:52,986 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:11:53,059 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-07-29 13:11:53,059 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-07-29 13:11:53,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:11:53,278 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-07-29 13:11:53,311 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:11:53,326 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-07-29 13:11:53,508 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-29 13:11:53,590 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:11:53,667 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2026-07-29 13:11:53,667 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2026-07-29 13:11:53,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:11:53,872 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-07-29 13:11:53,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:11:53,920 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-07-29 13:11:54,123 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-29 13:11:54,124 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-07-29 13:11:54,160 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-29 13:11:54,161 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-29 13:11:54,195 [ scc.git] DEBUG Calling 'git reset --hard 49081853adcd20c0bbec2cf70bbe4b3fd39629a2' 2026-07-29 13:11:54,356 [ scc.git] DEBUG HEAD is now at 4908185 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2026-07-29 13:11:54,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:11:54,549 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-07-29 13:11:54,580 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-07-29 13:11:54,600 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#22](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2026-07-29 13:11:54,611 [ scc.config] DEBUG Found github.token 2026-07-29 13:11:54,611 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2026-07-29 13:11:54,611 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-07-29 13:11:54,640 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:11:54,659 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-07-29 13:11:54,844 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-29 13:11:54,921 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:11:54,990 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2026-07-29 13:11:54,990 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2026-07-29 13:11:55,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:11:55,200 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-07-29 13:11:55,233 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:11:55,249 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-07-29 13:11:55,409 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-29 13:11:55,481 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:11:55,552 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-07-29 13:11:55,552 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-07-29 13:11:55,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:11:55,739 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-07-29 13:11:55,775 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:11:55,790 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-07-29 13:11:55,960 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-29 13:11:55,960 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-07-29 13:11:55,988 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-29 13:11:55,989 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-29 13:11:56,019 [ scc.git] DEBUG Calling 'git reset --hard 723ab7c64dfcdaaa4750c0d90e6321860da3e4fe' 2026-07-29 13:11:56,171 [ scc.git] DEBUG HEAD is now at 723ab7c merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-07-29 13:11:56,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:11:56,377 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-07-29 13:11:56,400 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-07-29 13:11:56,420 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#22](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2026-07-29 13:11:56,461 [ scc.config] DEBUG Found github.token 2026-07-29 13:11:56,461 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2026-07-29 13:11:56,461 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-07-29 13:11:56,489 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:11:56,503 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-07-29 13:11:56,730 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-29 13:11:56,730 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-07-29 13:11:56,752 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-29 13:11:56,753 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-29 13:11:56,788 [ scc.git] DEBUG Calling 'git reset --hard 723ab7c64dfcdaaa4750c0d90e6321860da3e4fe' 2026-07-29 13:11:56,947 [ scc.git] DEBUG HEAD is now at 723ab7c merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-07-29 13:11:57,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:11:57,129 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-07-29 13:11:57,168 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-07-29 13:11:57,192 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#22](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2026-07-29 13:11:57,206 [ scc.config] DEBUG Found github.token 2026-07-29 13:11:57,206 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2026-07-29 13:11:57,206 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-29 13:11:57,323 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:11:57,323 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:11:57,336 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:11:57,441 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-29 13:11:57,522 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a638e4910> has no local changes 2026-07-29 13:11:57,522 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#22 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/)' 2026-07-29 13:11:57,671 [ scc.git] DEBUG [detached HEAD e99bc49] merge master -Dorg -Ssuccess-only 2026-07-29 13:11:57,673 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:11:57,673 [ scc.repo] DEBUG ## PRs found: 2026-07-29 13:11:58,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2026-07-29 13:11:58,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/551 HTTP/1.1" 200 None 2026-07-29 13:11:58,672 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:11:59,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/4f4011b8515552e5285e031e209dbfa68117b7f1?page=1 HTTP/1.1" 200 None 2026-07-29 13:11:59,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/4f4011b8515552e5285e031e209dbfa68117b7f1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:12:00,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/4f4011b8515552e5285e031e209dbfa68117b7f1/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:12:00,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/4f4011b8515552e5285e031e209dbfa68117b7f1?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:01,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/4f4011b8515552e5285e031e209dbfa68117b7f1?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:12:01,609 [ scc.repo] DEBUG - PR 551 dependabot[bot] 'Bump body-parser from 1.20.5 to 1.20.6' 2026-07-29 13:12:02,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/550 HTTP/1.1" 200 None 2026-07-29 13:12:02,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/550/comments HTTP/1.1" 200 None 2026-07-29 13:12:02,657 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:12:03,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2b7bdf7b61ef5b2f46cd128429acc974892bbca6?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:03,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2b7bdf7b61ef5b2f46cd128429acc974892bbca6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:12:04,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2b7bdf7b61ef5b2f46cd128429acc974892bbca6/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:12:04,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2b7bdf7b61ef5b2f46cd128429acc974892bbca6?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:05,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/2b7bdf7b61ef5b2f46cd128429acc974892bbca6?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:12:05,428 [ scc.repo] DEBUG - PR 550 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.6' 2026-07-29 13:12:05,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/549 HTTP/1.1" 200 None 2026-07-29 13:12:06,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/549/comments HTTP/1.1" 200 None 2026-07-29 13:12:06,450 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:12:07,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b5d7408bab9f44fa85ebec4a91f70b73ea8a4383?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:07,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b5d7408bab9f44fa85ebec4a91f70b73ea8a4383/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:12:08,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b5d7408bab9f44fa85ebec4a91f70b73ea8a4383/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:12:08,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b5d7408bab9f44fa85ebec4a91f70b73ea8a4383?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:09,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b5d7408bab9f44fa85ebec4a91f70b73ea8a4383?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:12:09,269 [ scc.repo] DEBUG - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.3 to 1.10.0' 2026-07-29 13:12:09,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/548 HTTP/1.1" 200 None 2026-07-29 13:12:09,769 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:12:10,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ab4cf7a5a58a2212a334d5cb33c387a8bbdced88?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:10,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ab4cf7a5a58a2212a334d5cb33c387a8bbdced88/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:12:11,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ab4cf7a5a58a2212a334d5cb33c387a8bbdced88/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:12:12,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ab4cf7a5a58a2212a334d5cb33c387a8bbdced88?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:12,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/ab4cf7a5a58a2212a334d5cb33c387a8bbdced88?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:12:12,523 [ scc.repo] DEBUG - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' 2026-07-29 13:12:13,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/547 HTTP/1.1" 200 None 2026-07-29 13:12:13,060 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:12:13,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b277691395fa5c2b16c02f49deb9a5244ea6e56a?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:14,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b277691395fa5c2b16c02f49deb9a5244ea6e56a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:12:14,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b277691395fa5c2b16c02f49deb9a5244ea6e56a/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:12:15,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b277691395fa5c2b16c02f49deb9a5244ea6e56a?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:15,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b277691395fa5c2b16c02f49deb9a5244ea6e56a?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:12:15,858 [ scc.repo] DEBUG - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' 2026-07-29 13:12:16,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/546 HTTP/1.1" 200 None 2026-07-29 13:12:16,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:17,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:12:18,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:12:18,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:19,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/cf1523e8c6e3d91d8b862eb49a5b679caa796c78?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:12:19,023 [ scc.repo] DEBUG - PR 546 will-moore 'Use POST data for saveImgRdef params' 2026-07-29 13:12:19,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/544 HTTP/1.1" 200 None 2026-07-29 13:12:20,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/544/comments HTTP/1.1" 200 None 2026-07-29 13:12:20,082 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:12:20,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b9d6befc6684104960c2906702c2eb687dc1e851?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:21,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b9d6befc6684104960c2906702c2eb687dc1e851/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:12:21,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b9d6befc6684104960c2906702c2eb687dc1e851/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:12:22,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b9d6befc6684104960c2906702c2eb687dc1e851?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:22,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b9d6befc6684104960c2906702c2eb687dc1e851?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:12:22,856 [ scc.repo] DEBUG - PR 544 dependabot[bot] 'Bump js-yaml, mocha and eslint' 2026-07-29 13:12:23,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/541 HTTP/1.1" 200 None 2026-07-29 13:12:23,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/83cb921ccbf7bc394ef317de7cb767468ae7eaad?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:24,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/83cb921ccbf7bc394ef317de7cb767468ae7eaad/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:12:25,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/83cb921ccbf7bc394ef317de7cb767468ae7eaad/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:12:25,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/83cb921ccbf7bc394ef317de7cb767468ae7eaad?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:26,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/83cb921ccbf7bc394ef317de7cb767468ae7eaad?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:12:26,138 [ scc.repo] DEBUG - PR 541 will-moore 'Only add channel to tile request string if active' 2026-07-29 13:12:26,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/540 HTTP/1.1" 200 None 2026-07-29 13:12:26,651 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:12:27,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/c568a324264b0d49ff3d53f75024eca7482de94b?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:27,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/c568a324264b0d49ff3d53f75024eca7482de94b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:12:28,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/c568a324264b0d49ff3d53f75024eca7482de94b/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:12:29,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/c568a324264b0d49ff3d53f75024eca7482de94b?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:29,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/c568a324264b0d49ff3d53f75024eca7482de94b?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:12:29,496 [ scc.repo] DEBUG - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' 2026-07-29 13:12:29,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/539 HTTP/1.1" 200 None 2026-07-29 13:12:29,993 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:12:30,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0f0014ac7a6b5a5423c4d298541516407fd6d3cb?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:31,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0f0014ac7a6b5a5423c4d298541516407fd6d3cb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:12:31,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0f0014ac7a6b5a5423c4d298541516407fd6d3cb/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:12:32,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0f0014ac7a6b5a5423c4d298541516407fd6d3cb?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:32,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/0f0014ac7a6b5a5423c4d298541516407fd6d3cb?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:12:32,718 [ scc.repo] DEBUG - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' 2026-07-29 13:12:33,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/537 HTTP/1.1" 200 None 2026-07-29 13:12:33,205 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:12:33,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/16a64815dd14cc424f6ac8b24630b37ccfd0c282?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:34,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/16a64815dd14cc424f6ac8b24630b37ccfd0c282/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:12:34,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/16a64815dd14cc424f6ac8b24630b37ccfd0c282/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:12:35,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/16a64815dd14cc424f6ac8b24630b37ccfd0c282?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:36,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/16a64815dd14cc424f6ac8b24630b37ccfd0c282?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:12:36,010 [ scc.repo] DEBUG - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' 2026-07-29 13:12:36,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/535 HTTP/1.1" 200 None 2026-07-29 13:12:37,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/535/comments HTTP/1.1" 200 None 2026-07-29 13:12:37,202 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:12:37,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/46500d0a497fc9945eeca87fd36672b2bf8d6e79?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:38,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/46500d0a497fc9945eeca87fd36672b2bf8d6e79/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:12:38,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/46500d0a497fc9945eeca87fd36672b2bf8d6e79/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:12:39,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/46500d0a497fc9945eeca87fd36672b2bf8d6e79?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:39,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/46500d0a497fc9945eeca87fd36672b2bf8d6e79?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:12:39,923 [ scc.repo] DEBUG - PR 535 dependabot[bot] 'Bump tmp and eslint' 2026-07-29 13:12:40,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/532 HTTP/1.1" 200 None 2026-07-29 13:12:40,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/532/comments HTTP/1.1" 200 None 2026-07-29 13:12:41,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:42,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:12:42,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:12:43,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:43,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:12:43,834 [ scc.repo] DEBUG - PR 532 will-moore 'Zarr layers' 2026-07-29 13:12:44,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/527 HTTP/1.1" 200 None 2026-07-29 13:12:44,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/527/comments HTTP/1.1" 200 None 2026-07-29 13:12:44,853 [ scc.repo] DEBUG # ... Include label: include 2026-07-29 13:12:45,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f4674bc0a542677ce0acc3fbb6d7ce3f990b47f7?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:45,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f4674bc0a542677ce0acc3fbb6d7ce3f990b47f7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:12:46,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f4674bc0a542677ce0acc3fbb6d7ce3f990b47f7/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:12:46,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f4674bc0a542677ce0acc3fbb6d7ce3f990b47f7?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:47,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/f4674bc0a542677ce0acc3fbb6d7ce3f990b47f7?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:12:47,450 [ scc.repo] DEBUG - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' 2026-07-29 13:12:47,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511 HTTP/1.1" 200 None 2026-07-29 13:12:48,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511/comments HTTP/1.1" 200 None 2026-07-29 13:12:48,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None 2026-07-29 13:12:49,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2026-07-29 13:12:49,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2026-07-29 13:12:50,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2026-07-29 13:12:50,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2026-07-29 13:12:51,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:52,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:12:52,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-07-29 13:12:53,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:12:53,010 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2026-07-29 13:12:53,011 [ scc.repo] DEBUG ## Branches found: 2026-07-29 13:12:53,011 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-07-29 13:12:53,011 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:12:53,011 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:12:53,057 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-29 13:12:53,084 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-29 13:12:53,084 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-29 13:12:53,179 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-29 13:12:53,840 [ scc.git] DEBUG Updating 7a798cee..cae0b026 2026-07-29 13:12:54,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/534 HTTP/1.1" 200 None 2026-07-29 13:12:55,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/533 HTTP/1.1" 200 None 2026-07-29 13:12:55,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/530 HTTP/1.1" 200 None 2026-07-29 13:12:56,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/528 HTTP/1.1" 200 None 2026-07-29 13:12:57,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/529 HTTP/1.1" 200 None 2026-07-29 13:12:58,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/526 HTTP/1.1" 200 None 2026-07-29 13:12:59,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/525 HTTP/1.1" 200 None 2026-07-29 13:12:59,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/524 HTTP/1.1" 200 None 2026-07-29 13:13:00,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/523 HTTP/1.1" 200 None 2026-07-29 13:13:01,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/522 HTTP/1.1" 200 None 2026-07-29 13:13:02,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/521 HTTP/1.1" 200 None 2026-07-29 13:13:03,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/520 HTTP/1.1" 200 None 2026-07-29 13:13:04,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/519 HTTP/1.1" 200 None 2026-07-29 13:13:04,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/518 HTTP/1.1" 200 None 2026-07-29 13:13:05,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/514 HTTP/1.1" 200 None 2026-07-29 13:13:06,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/513 HTTP/1.1" 200 None 2026-07-29 13:13:07,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/512 HTTP/1.1" 200 None 2026-07-29 13:13:08,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/465 HTTP/1.1" 200 None 2026-07-29 13:13:08,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/517 HTTP/1.1" 200 None 2026-07-29 13:13:09,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/516 HTTP/1.1" 200 None 2026-07-29 13:13:10,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2026-07-29 13:13:11,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2026-07-29 13:13:11,276 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2026-07-29 13:13:11,871 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-29 13:13:11,872 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2026-07-29 13:13:11,904 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2026-07-29 13:13:13,119 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-29 13:13:13,119 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2026-07-29 13:13:13,153 [ scc.git] DEBUG Calling 'git fetch origin pull/532/head' 2026-07-29 13:13:13,684 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-29 13:13:13,684 [ scc.git] DEBUG * branch refs/pull/532/head -> FETCH_HEAD 2026-07-29 13:13:13,709 [ scc.git] DEBUG Calling 'git fetch origin pull/535/head' 2026-07-29 13:13:14,164 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-29 13:13:14,164 [ scc.git] DEBUG * branch refs/pull/535/head -> FETCH_HEAD 2026-07-29 13:13:14,191 [ scc.git] DEBUG Calling 'git fetch origin pull/537/head' 2026-07-29 13:13:14,641 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-29 13:13:14,641 [ scc.git] DEBUG * branch refs/pull/537/head -> FETCH_HEAD 2026-07-29 13:13:14,665 [ scc.git] DEBUG Calling 'git fetch origin pull/539/head' 2026-07-29 13:13:15,112 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-29 13:13:15,113 [ scc.git] DEBUG * branch refs/pull/539/head -> FETCH_HEAD 2026-07-29 13:13:15,142 [ scc.git] DEBUG Calling 'git fetch origin pull/540/head' 2026-07-29 13:13:15,589 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-29 13:13:15,589 [ scc.git] DEBUG * branch refs/pull/540/head -> FETCH_HEAD 2026-07-29 13:13:15,611 [ scc.git] DEBUG Calling 'git fetch origin pull/541/head' 2026-07-29 13:13:16,134 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-29 13:13:16,134 [ scc.git] DEBUG * branch refs/pull/541/head -> FETCH_HEAD 2026-07-29 13:13:16,162 [ scc.git] DEBUG Calling 'git fetch origin pull/544/head' 2026-07-29 13:13:16,592 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-29 13:13:16,592 [ scc.git] DEBUG * branch refs/pull/544/head -> FETCH_HEAD 2026-07-29 13:13:16,625 [ scc.git] DEBUG Calling 'git fetch origin pull/546/head' 2026-07-29 13:13:17,094 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-29 13:13:17,094 [ scc.git] DEBUG * branch refs/pull/546/head -> FETCH_HEAD 2026-07-29 13:13:17,118 [ scc.git] DEBUG Calling 'git fetch origin pull/547/head' 2026-07-29 13:13:17,563 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-29 13:13:17,563 [ scc.git] DEBUG * branch refs/pull/547/head -> FETCH_HEAD 2026-07-29 13:13:17,588 [ scc.git] DEBUG Calling 'git fetch origin pull/548/head' 2026-07-29 13:13:18,098 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-29 13:13:18,098 [ scc.git] DEBUG * branch refs/pull/548/head -> FETCH_HEAD 2026-07-29 13:13:18,132 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head' 2026-07-29 13:13:18,558 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-29 13:13:18,558 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD 2026-07-29 13:13:18,586 [ scc.git] DEBUG Calling 'git fetch origin pull/550/head' 2026-07-29 13:13:19,088 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-29 13:13:19,089 [ scc.git] DEBUG * branch refs/pull/550/head -> FETCH_HEAD 2026-07-29 13:13:19,126 [ scc.git] DEBUG Calling 'git fetch origin pull/551/head' 2026-07-29 13:13:19,611 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-29 13:13:19,612 [ scc.git] DEBUG * branch refs/pull/551/head -> FETCH_HEAD 2026-07-29 13:13:19,638 [ scc.git] DEBUG ## Unique users: [] 2026-07-29 13:13:19,638 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:13:19,639 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:13:19,662 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2026-07-29 13:13:19,714 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:13:19,727 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2026-07-29 13:13:20,082 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2026-07-29 13:13:20,198 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:13:20,288 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2026-07-29 13:13:20,288 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2026-07-29 13:13:20,288 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2026-07-29 13:13:20,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:13:20,490 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f4674bc0a542677ce0acc3fbb6d7ce3f990b47f7' 2026-07-29 13:13:20,574 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:13:20,590 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add grid overlay feature with configurable cell size and labels) f4674bc0a542677ce0acc3fbb6d7ce3f990b47f7' 2026-07-29 13:13:21,046 [ scc.git] DEBUG Auto-merging src/model/image_config.js 2026-07-29 13:13:21,217 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:13:21,311 [ scc.git] DEBUG css/app.css | 321 +++++++++++++++++++++++++++++++++++- 2026-07-29 13:13:21,311 [ scc.git] DEBUG src/model/image_config.js | 2 +- 2026-07-29 13:13:21,311 [ scc.git] DEBUG src/viewers/ol3-viewer.html | 0 2026-07-29 13:13:21,311 [ scc.git] DEBUG src/viewers/ol3-viewer.js | 0 2026-07-29 13:13:21,311 [ scc.git] DEBUG src/viewers/viewer/Viewer.js | 4 + 2026-07-29 13:13:21,311 [ scc.git] DEBUG src/viewers/viewer/controls/Grid.js | 295 +++++++++++++++++++++++++++++++++ 2026-07-29 13:13:21,311 [ scc.git] DEBUG src/viewers/viewer/globals.js | 8 + 2026-07-29 13:13:21,311 [ scc.git] DEBUG src/viewers/viewer/grid-overlay.js | 242 +++++++++++++++++++++++++++ 2026-07-29 13:13:21,311 [ scc.git] DEBUG 8 files changed, 870 insertions(+), 2 deletions(-) 2026-07-29 13:13:21,311 [ scc.git] DEBUG mode change 100644 => 100755 css/app.css 2026-07-29 13:13:21,311 [ scc.git] DEBUG mode change 100644 => 100755 src/viewers/ol3-viewer.html 2026-07-29 13:13:21,311 [ scc.git] DEBUG mode change 100644 => 100755 src/viewers/ol3-viewer.js 2026-07-29 13:13:21,311 [ scc.git] DEBUG create mode 100644 src/viewers/viewer/controls/Grid.js 2026-07-29 13:13:21,311 [ scc.git] DEBUG create mode 100755 src/viewers/viewer/grid-overlay.js 2026-07-29 13:13:21,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:13:21,525 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-07-29 13:13:21,597 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:13:21,612 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 532 (Zarr layers) fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-07-29 13:13:22,423 [ scc.git] DEBUG Auto-merging css/app.css 2026-07-29 13:13:22,423 [ scc.git] DEBUG CONFLICT (content): Merge conflict in css/app.css 2026-07-29 13:13:22,423 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-29 13:13:22,423 [ scc.git] DEBUG Auto-merging package.json 2026-07-29 13:13:22,423 [ scc.git] DEBUG Auto-merging src/app/context.js 2026-07-29 13:13:22,423 [ scc.git] DEBUG Auto-merging src/model/image_config.js 2026-07-29 13:13:22,423 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2026-07-29 13:13:22,423 [ scc.git] DEBUG Auto-merging webpack.dev.config.js 2026-07-29 13:13:22,454 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-29 13:13:22,458 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-29 13:13:22,584 [ scc.git] DEBUG Calling 'git reset --hard 10e439d9e69c65bb5e2f4eaf20df620b227a9b2c' 2026-07-29 13:13:23,124 [ scc.git] DEBUG HEAD is now at 10e439d9 merge master -Dorg -Ssuccess-only: PR 527 (Add grid overlay feature with configurable cell size and labels) 2026-07-29 13:13:23,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:13:23,336 [ scc.git] DEBUG Calling 'git merge-base cae0b0260125ca856c05b4ac7d723879827a6e76 fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-07-29 13:13:23,373 [ scc.git] DEBUG Calling 'git diff --name-only 0b7eaf71f7e3f5c7289fab4bf857094bdadce1e4..cae0b0260125ca856c05b4ac7d723879827a6e76' 2026-07-29 13:13:23,407 [ scc.git] INFO - PR 532 will-moore 'Zarr layers' Conflicting PR. Removed from build [OMERO-plugins-push#22](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/consoleText) for more details. Possible conflicts: - PR #527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' - css/app.css --conflicts 2026-07-29 13:13:23,425 [ scc.config] DEBUG Found github.token 2026-07-29 13:13:23,425 [ scc.git] DEBUG Not adding comment to issue #532, already --conflicts. 2026-07-29 13:13:23,425 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...46500d0a497fc9945eeca87fd36672b2bf8d6e79' 2026-07-29 13:13:23,494 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:13:23,514 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 535 (Bump tmp and eslint) 46500d0a497fc9945eeca87fd36672b2bf8d6e79' 2026-07-29 13:13:23,943 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:13:24,035 [ scc.git] DEBUG package-lock.json | 2238 +++++++++++++++++++++-------------------------------- 2026-07-29 13:13:24,035 [ scc.git] DEBUG package.json | 2 +- 2026-07-29 13:13:24,035 [ scc.git] DEBUG 2 files changed, 869 insertions(+), 1371 deletions(-) 2026-07-29 13:13:24,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:13:24,219 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16a64815dd14cc424f6ac8b24630b37ccfd0c282' 2026-07-29 13:13:24,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:13:24,336 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 537 (Bump launch-editor from 2.13.2 to 2.14.1) 16a64815dd14cc424f6ac8b24630b37ccfd0c282' 2026-07-29 13:13:24,634 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-29 13:13:24,715 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:13:24,801 [ scc.git] DEBUG package-lock.json | 28 ++++++++++++++-------------- 2026-07-29 13:13:24,801 [ scc.git] DEBUG 1 file changed, 14 insertions(+), 14 deletions(-) 2026-07-29 13:13:24,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:13:24,997 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0f0014ac7a6b5a5423c4d298541516407fd6d3cb' 2026-07-29 13:13:25,085 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:13:25,119 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 539 (Bump ws, engine.io and socket.io-adapter) 0f0014ac7a6b5a5423c4d298541516407fd6d3cb' 2026-07-29 13:13:25,374 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-29 13:13:25,476 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:13:25,564 [ scc.git] DEBUG package-lock.json | 44 ++++++++++++++++++++++---------------------- 2026-07-29 13:13:25,564 [ scc.git] DEBUG 1 file changed, 22 insertions(+), 22 deletions(-) 2026-07-29 13:13:25,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:13:25,766 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c568a324264b0d49ff3d53f75024eca7482de94b' 2026-07-29 13:13:25,847 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:13:25,862 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 540 (Bump @babel/core from 7.5.4 to 7.29.6) c568a324264b0d49ff3d53f75024eca7482de94b' 2026-07-29 13:13:26,188 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-29 13:13:26,188 [ scc.git] DEBUG Auto-merging package.json 2026-07-29 13:13:26,283 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:13:26,371 [ scc.git] DEBUG package-lock.json | 667 +++++++++++++++++++++++++++++++----------------------- 2026-07-29 13:13:26,371 [ scc.git] DEBUG package.json | 2 +- 2026-07-29 13:13:26,371 [ scc.git] DEBUG 2 files changed, 389 insertions(+), 280 deletions(-) 2026-07-29 13:13:26,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:13:26,582 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...83cb921ccbf7bc394ef317de7cb767468ae7eaad' 2026-07-29 13:13:26,687 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:13:26,701 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 541 (Only add channel to tile request string if active) 83cb921ccbf7bc394ef317de7cb767468ae7eaad' 2026-07-29 13:13:27,074 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:13:27,161 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 49 ++++++++++++++++++++------------------ 2026-07-29 13:13:27,161 [ scc.git] DEBUG 1 file changed, 26 insertions(+), 23 deletions(-) 2026-07-29 13:13:27,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:13:27,357 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b9d6befc6684104960c2906702c2eb687dc1e851' 2026-07-29 13:13:27,452 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:13:27,469 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 544 (Bump js-yaml, mocha and eslint) b9d6befc6684104960c2906702c2eb687dc1e851' 2026-07-29 13:13:27,765 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-29 13:13:27,765 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-07-29 13:13:27,765 [ scc.git] DEBUG Auto-merging package.json 2026-07-29 13:13:27,765 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package.json 2026-07-29 13:13:27,796 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-29 13:13:27,799 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-29 13:13:27,840 [ scc.git] DEBUG Calling 'git reset --hard d378ce6386fb26de3bf7ad872463cac75efcf99f' 2026-07-29 13:13:28,111 [ scc.git] DEBUG HEAD is now at d378ce63 merge master -Dorg -Ssuccess-only: PR 541 (Only add channel to tile request string if active) 2026-07-29 13:13:28,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:13:28,300 [ scc.git] DEBUG Calling 'git merge-base cae0b0260125ca856c05b4ac7d723879827a6e76 b9d6befc6684104960c2906702c2eb687dc1e851' 2026-07-29 13:13:28,329 [ scc.git] DEBUG Calling 'git diff --name-only cae0b0260125ca856c05b4ac7d723879827a6e76..cae0b0260125ca856c05b4ac7d723879827a6e76' 2026-07-29 13:13:28,355 [ scc.git] INFO - PR 544 dependabot[bot] 'Bump js-yaml, mocha and eslint' Conflicting PR. Removed from build [OMERO-plugins-push#22](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/consoleText) for more details. Possible conflicts: - PR #532 will-moore 'Zarr layers' - package-lock.json - package.json - PR #535 dependabot[bot] 'Bump tmp and eslint' - package-lock.json - package.json - PR #537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' - package-lock.json - PR #539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - package-lock.json - PR #540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' - package-lock.json - package.json --conflicts 2026-07-29 13:13:28,367 [ scc.config] DEBUG Found github.token 2026-07-29 13:13:28,367 [ scc.git] DEBUG Not adding comment to issue #544, already --conflicts. 2026-07-29 13:13:28,367 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf1523e8c6e3d91d8b862eb49a5b679caa796c78' 2026-07-29 13:13:28,454 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:13:28,470 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 546 (Use POST data for saveImgRdef params) cf1523e8c6e3d91d8b862eb49a5b679caa796c78' 2026-07-29 13:13:28,704 [ scc.git] DEBUG Auto-merging src/model/image_config.js 2026-07-29 13:13:28,798 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:13:28,893 [ scc.git] DEBUG src/model/image_config.js | 7 ++++--- 2026-07-29 13:13:28,893 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 3 deletions(-) 2026-07-29 13:13:29,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:13:29,116 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b277691395fa5c2b16c02f49deb9a5244ea6e56a' 2026-07-29 13:13:29,294 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:13:29,319 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 547 (Bump websocket-driver from 0.7.4 to 0.7.5) b277691395fa5c2b16c02f49deb9a5244ea6e56a' 2026-07-29 13:13:29,741 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-29 13:13:29,829 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:13:29,924 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-07-29 13:13:29,924 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-07-29 13:13:30,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:13:30,123 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ab4cf7a5a58a2212a334d5cb33c387a8bbdced88' 2026-07-29 13:13:30,258 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:13:30,280 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 548 (Bump fast-uri from 3.1.2 to 3.1.4) ab4cf7a5a58a2212a334d5cb33c387a8bbdced88' 2026-07-29 13:13:30,618 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-29 13:13:30,707 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:13:30,800 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-07-29 13:13:30,800 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-07-29 13:13:31,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:13:31,028 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b5d7408bab9f44fa85ebec4a91f70b73ea8a4383' 2026-07-29 13:13:31,152 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:13:31,171 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Bump shell-quote from 1.8.3 to 1.10.0) b5d7408bab9f44fa85ebec4a91f70b73ea8a4383' 2026-07-29 13:13:31,540 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-29 13:13:31,541 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-07-29 13:13:31,582 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-29 13:13:31,584 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-29 13:13:31,626 [ scc.git] DEBUG Calling 'git reset --hard 10862e5e2e50047af78cd93787ec3d51b3a6988d' 2026-07-29 13:13:31,857 [ scc.git] DEBUG HEAD is now at 10862e5e merge master -Dorg -Ssuccess-only: PR 548 (Bump fast-uri from 3.1.2 to 3.1.4) 2026-07-29 13:13:32,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:13:32,071 [ scc.git] DEBUG Calling 'git merge-base cae0b0260125ca856c05b4ac7d723879827a6e76 b5d7408bab9f44fa85ebec4a91f70b73ea8a4383' 2026-07-29 13:13:32,105 [ scc.git] DEBUG Calling 'git diff --name-only cae0b0260125ca856c05b4ac7d723879827a6e76..cae0b0260125ca856c05b4ac7d723879827a6e76' 2026-07-29 13:13:32,132 [ scc.git] INFO - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.3 to 1.10.0' Conflicting PR. Removed from build [OMERO-plugins-push#22](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/consoleText) for more details. Possible conflicts: - PR #532 will-moore 'Zarr layers' - package-lock.json - PR #535 dependabot[bot] 'Bump tmp and eslint' - package-lock.json - PR #537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' - package-lock.json - PR #539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - package-lock.json - PR #540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' - package-lock.json - PR #544 dependabot[bot] 'Bump js-yaml, mocha and eslint' - package-lock.json - PR #547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' - package-lock.json - PR #548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' - package-lock.json --conflicts 2026-07-29 13:13:32,154 [ scc.config] DEBUG Found github.token 2026-07-29 13:13:32,154 [ scc.git] DEBUG Not adding comment to issue #549, already --conflicts. 2026-07-29 13:13:32,155 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2b7bdf7b61ef5b2f46cd128429acc974892bbca6' 2026-07-29 13:13:32,237 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:13:32,251 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 550 (Bump webpack-dev-server from 5.2.4 to 5.2.6) 2b7bdf7b61ef5b2f46cd128429acc974892bbca6' 2026-07-29 13:13:32,564 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-29 13:13:32,564 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-07-29 13:13:32,564 [ scc.git] DEBUG Auto-merging package.json 2026-07-29 13:13:32,599 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-29 13:13:32,605 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-29 13:13:32,650 [ scc.git] DEBUG Calling 'git reset --hard 10862e5e2e50047af78cd93787ec3d51b3a6988d' 2026-07-29 13:13:32,844 [ scc.git] DEBUG HEAD is now at 10862e5e merge master -Dorg -Ssuccess-only: PR 548 (Bump fast-uri from 3.1.2 to 3.1.4) 2026-07-29 13:13:33,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:13:33,060 [ scc.git] DEBUG Calling 'git merge-base cae0b0260125ca856c05b4ac7d723879827a6e76 2b7bdf7b61ef5b2f46cd128429acc974892bbca6' 2026-07-29 13:13:33,091 [ scc.git] DEBUG Calling 'git diff --name-only cae0b0260125ca856c05b4ac7d723879827a6e76..cae0b0260125ca856c05b4ac7d723879827a6e76' 2026-07-29 13:13:33,115 [ scc.git] INFO - PR 550 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.6' Conflicting PR. Removed from build [OMERO-plugins-push#22](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/consoleText) for more details. Possible conflicts: - PR #532 will-moore 'Zarr layers' - package-lock.json - PR #535 dependabot[bot] 'Bump tmp and eslint' - package-lock.json - PR #537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' - package-lock.json - PR #539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - package-lock.json - PR #540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' - package-lock.json - PR #544 dependabot[bot] 'Bump js-yaml, mocha and eslint' - package-lock.json - PR #547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' - package-lock.json - PR #548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' - package-lock.json - PR #549 dependabot[bot] 'Bump shell-quote from 1.8.3 to 1.10.0' - package-lock.json --conflicts 2026-07-29 13:13:33,127 [ scc.config] DEBUG Found github.token 2026-07-29 13:13:33,127 [ scc.git] DEBUG Not adding comment to issue #550, already --conflicts. 2026-07-29 13:13:33,127 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4f4011b8515552e5285e031e209dbfa68117b7f1' 2026-07-29 13:13:33,202 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:13:33,216 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 551 (Bump body-parser from 1.20.5 to 1.20.6) 4f4011b8515552e5285e031e209dbfa68117b7f1' 2026-07-29 13:13:33,507 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-29 13:13:33,586 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:13:33,668 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-07-29 13:13:33,668 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-07-29 13:13:33,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:13:33,868 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-29 13:13:33,996 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:13:33,996 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:13:34,009 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:13:34,118 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-29 13:13:34,224 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a62a97b50> has no local changes 2026-07-29 13:13:34,224 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7a798cee..cae0b026 Previously merged: - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' - PR 529 will-moore 'Image id and roi id initial params' - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 471 will-moore 'Z projection disabled tooltip' - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' - PR 535 dependabot[bot] 'Bump tmp and eslint' - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' - PR 541 will-moore 'Only add channel to tile request string if active' - PR 546 will-moore 'Use POST data for saveImgRdef params' - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' - PR 551 dependabot[bot] 'Bump body-parser from 1.20.5 to 1.20.6' Conflicting PRs (not included): - PR 532 will-moore 'Zarr layers' - PR 544 dependabot[bot] 'Bump js-yaml, mocha and eslint' - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.3 to 1.10.0' - PR 550 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.6' Generated by OMERO-plugins-push#22 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/)' 2026-07-29 13:13:34,421 [ scc.git] DEBUG [detached HEAD 7832f0cc] merge master -Dorg -Ssuccess-only 2026-07-29 13:13:34,425 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:13:34,425 [ scc.repo] DEBUG ## PRs found: 2026-07-29 13:13:34,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2026-07-29 13:13:35,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2026-07-29 13:13:35,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2026-07-29 13:13:35,958 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:13:36,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-07-29 13:13:37,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:13:37,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:13:38,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-07-29 13:13:38,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:13:38,854 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-29 13:13:39,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2026-07-29 13:13:39,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-07-29 13:13:40,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:13:40,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-07-29 13:13:41,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:13:41,413 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-07-29 13:13:41,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2026-07-29 13:13:42,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2026-07-29 13:13:43,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322?page=1 HTTP/1.1" 200 None 2026-07-29 13:13:43,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:13:44,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322?page=1 HTTP/1.1" 200 None 2026-07-29 13:13:44,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:13:44,488 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2026-07-29 13:13:44,488 [ scc.repo] DEBUG ## Branches found: 2026-07-29 13:13:44,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-07-29 13:13:44,489 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:13:44,489 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:13:44,512 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-29 13:13:44,553 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-29 13:13:44,553 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-29 13:13:44,596 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-29 13:13:44,662 [ scc.git] DEBUG Already up to date. 2026-07-29 13:13:44,662 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-07-29 13:13:45,092 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-07-29 13:13:45,092 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-07-29 13:13:45,122 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2026-07-29 13:13:45,567 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-07-29 13:13:45,567 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2026-07-29 13:13:45,594 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2026-07-29 13:13:46,008 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-07-29 13:13:46,008 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2026-07-29 13:13:46,035 [ scc.git] DEBUG ## Unique users: [] 2026-07-29 13:13:46,035 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:13:46,035 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:13:46,051 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-07-29 13:13:46,082 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:13:46,098 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-07-29 13:13:46,373 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:13:46,445 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2026-07-29 13:13:46,445 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2026-07-29 13:13:46,445 [ scc.git] DEBUG requirements.txt | 2 +- 2026-07-29 13:13:46,445 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2026-07-29 13:13:46,445 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2026-07-29 13:13:46,445 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2026-07-29 13:13:46,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:13:46,635 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-07-29 13:13:46,678 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:13:46,693 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-07-29 13:13:46,909 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:13:46,994 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-29 13:13:46,994 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-29 13:13:47,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:13:47,218 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-07-29 13:13:47,262 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:13:47,280 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-07-29 13:13:47,483 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-07-29 13:13:47,483 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-07-29 13:13:47,511 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-29 13:13:47,512 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-29 13:13:47,542 [ scc.git] DEBUG Calling 'git reset --hard 570431362e5c599ce414d68dd2c7802b67146bb1' 2026-07-29 13:13:47,686 [ scc.git] DEBUG HEAD is now at 5704313 merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2026-07-29 13:13:47,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:13:47,890 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-07-29 13:13:47,915 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2026-07-29 13:13:47,940 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#22](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2026-07-29 13:13:47,952 [ scc.config] DEBUG Found github.token 2026-07-29 13:13:47,952 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2026-07-29 13:13:47,952 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-29 13:13:48,074 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:13:48,074 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:13:48,088 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:13:48,214 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-29 13:13:48,308 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a6286f7d0> has no local changes 2026-07-29 13:13:48,308 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#22 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/)' 2026-07-29 13:13:48,531 [ scc.git] DEBUG [detached HEAD 3922079] merge master -Dorg -Ssuccess-only 2026-07-29 13:13:48,534 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:13:48,534 [ scc.repo] DEBUG ## PRs found: 2026-07-29 13:13:48,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2026-07-29 13:13:49,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None 2026-07-29 13:13:49,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None 2026-07-29 13:13:50,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-07-29 13:13:51,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:13:51,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-07-29 13:13:52,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:13:52,053 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-07-29 13:13:52,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2026-07-29 13:13:53,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2026-07-29 13:13:53,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-07-29 13:13:54,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:13:54,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-07-29 13:13:55,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:13:55,435 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-07-29 13:13:55,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2026-07-29 13:13:56,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2026-07-29 13:13:57,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-07-29 13:13:57,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:13:58,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-07-29 13:13:58,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:13:58,746 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-07-29 13:13:58,746 [ scc.repo] DEBUG ## Branches found: 2026-07-29 13:13:58,746 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-07-29 13:13:58,746 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:13:58,746 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:13:58,768 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-29 13:13:58,791 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-29 13:13:58,791 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-29 13:13:58,813 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-29 13:13:58,958 [ scc.git] DEBUG Updating 3cd120c..55060a2 2026-07-29 13:13:59,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2026-07-29 13:13:59,579 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2026-07-29 13:14:00,147 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-07-29 13:14:00,148 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2026-07-29 13:14:00,174 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2026-07-29 13:14:00,859 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-07-29 13:14:00,859 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2026-07-29 13:14:00,883 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head' 2026-07-29 13:14:01,332 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-07-29 13:14:01,332 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD 2026-07-29 13:14:01,361 [ scc.git] DEBUG ## Unique users: [] 2026-07-29 13:14:01,361 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:14:01,361 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:01,383 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-07-29 13:14:01,456 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:01,484 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-07-29 13:14:01,814 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2026-07-29 13:14:01,814 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2026-07-29 13:14:01,814 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-07-29 13:14:01,814 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-07-29 13:14:01,841 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-29 13:14:01,842 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-29 13:14:01,888 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-07-29 13:14:02,110 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-07-29 13:14:02,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:14:02,351 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-07-29 13:14:02,406 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2026-07-29 13:14:02,447 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#22](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2026-07-29 13:14:02,472 [ scc.config] DEBUG Found github.token 2026-07-29 13:14:02,472 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2026-07-29 13:14:02,472 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2026-07-29 13:14:02,560 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:02,602 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2026-07-29 13:14:02,920 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-07-29 13:14:02,920 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-07-29 13:14:02,920 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2026-07-29 13:14:02,954 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-29 13:14:02,956 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-29 13:14:02,991 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-07-29 13:14:03,134 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-07-29 13:14:03,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:14:03,340 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2026-07-29 13:14:03,376 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2026-07-29 13:14:03,401 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#22](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2026-07-29 13:14:03,416 [ scc.config] DEBUG Found github.token 2026-07-29 13:14:03,416 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2026-07-29 13:14:03,416 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-07-29 13:14:03,459 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:03,478 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-07-29 13:14:03,782 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:14:03,879 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++- 2026-07-29 13:14:03,879 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-) 2026-07-29 13:14:04,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:14:04,059 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-29 13:14:04,208 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:14:04,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:04,224 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:14:04,340 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-29 13:14:04,443 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a6284f510> has no local changes 2026-07-29 13:14:04,443 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#22 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/)' 2026-07-29 13:14:04,631 [ scc.git] DEBUG [detached HEAD a16d6e4] merge master -Dorg -Ssuccess-only 2026-07-29 13:14:04,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:14:04,633 [ scc.repo] DEBUG ## PRs found: 2026-07-29 13:14:05,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2026-07-29 13:14:05,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2026-07-29 13:14:06,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-07-29 13:14:07,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:14:07,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-07-29 13:14:08,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:14:08,214 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-07-29 13:14:08,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2026-07-29 13:14:08,718 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:14:09,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-07-29 13:14:09,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:14:10,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-07-29 13:14:10,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:14:10,933 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-07-29 13:14:11,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2026-07-29 13:14:11,457 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:14:12,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-07-29 13:14:12,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:14:13,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-07-29 13:14:13,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:14:13,636 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-07-29 13:14:14,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2026-07-29 13:14:14,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2026-07-29 13:14:15,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2026-07-29 13:14:15,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2026-07-29 13:14:16,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2026-07-29 13:14:16,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2026-07-29 13:14:17,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2026-07-29 13:14:17,294 [ scc.repo] DEBUG ## Branches found: 2026-07-29 13:14:17,294 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-07-29 13:14:17,295 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:14:17,295 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:17,315 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-29 13:14:17,337 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-29 13:14:17,337 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-29 13:14:17,359 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-29 13:14:17,413 [ scc.git] DEBUG Already up to date. 2026-07-29 13:14:17,413 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2026-07-29 13:14:17,874 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-07-29 13:14:17,875 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2026-07-29 13:14:17,901 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2026-07-29 13:14:18,344 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-07-29 13:14:18,344 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2026-07-29 13:14:18,366 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2026-07-29 13:14:18,868 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-07-29 13:14:18,868 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2026-07-29 13:14:18,903 [ scc.git] DEBUG ## Unique users: [] 2026-07-29 13:14:18,903 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:14:18,903 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:18,933 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2026-07-29 13:14:18,966 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:18,986 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2026-07-29 13:14:19,244 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:14:19,320 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2026-07-29 13:14:19,320 [ scc.git] DEBUG package.json | 2 +- 2026-07-29 13:14:19,320 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2026-07-29 13:14:19,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:14:19,510 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2026-07-29 13:14:19,554 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:19,579 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2026-07-29 13:14:19,811 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-29 13:14:19,811 [ scc.git] DEBUG Auto-merging package.json 2026-07-29 13:14:19,907 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:14:20,003 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2026-07-29 13:14:20,003 [ scc.git] DEBUG package.json | 2 +- 2026-07-29 13:14:20,003 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-07-29 13:14:20,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:14:20,183 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-07-29 13:14:20,247 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:20,271 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-07-29 13:14:20,550 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:14:20,621 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-29 13:14:20,621 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-29 13:14:20,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:14:20,800 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-29 13:14:20,958 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:14:20,958 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:20,983 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:14:21,104 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-29 13:14:21,168 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a62889210> has no local changes 2026-07-29 13:14:21,168 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#22 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/)' 2026-07-29 13:14:21,337 [ scc.git] DEBUG [detached HEAD 1159de3] merge master -Dorg -Ssuccess-only 2026-07-29 13:14:21,339 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:14:21,339 [ scc.repo] DEBUG ## PRs found: 2026-07-29 13:14:21,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2026-07-29 13:14:22,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2026-07-29 13:14:22,193 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:14:22,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-07-29 13:14:23,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:14:24,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:14:24,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-07-29 13:14:25,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:14:25,094 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-29 13:14:25,094 [ scc.repo] DEBUG ## Branches found: 2026-07-29 13:14:25,094 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-07-29 13:14:25,095 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:14:25,095 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:25,136 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-29 13:14:25,173 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-29 13:14:25,173 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-29 13:14:25,205 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-29 13:14:25,308 [ scc.git] DEBUG Already up to date. 2026-07-29 13:14:25,308 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2026-07-29 13:14:25,816 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2026-07-29 13:14:25,816 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2026-07-29 13:14:25,846 [ scc.git] DEBUG ## Unique users: [] 2026-07-29 13:14:25,846 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:14:25,846 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:25,865 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2026-07-29 13:14:25,897 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:25,920 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2026-07-29 13:14:26,125 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:14:26,207 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-29 13:14:26,207 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-29 13:14:26,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:14:26,479 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-29 13:14:26,669 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:14:26,669 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:26,687 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:14:26,833 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-29 13:14:26,893 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a62842850> has no local changes 2026-07-29 13:14:26,893 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#22 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/)' 2026-07-29 13:14:27,048 [ scc.git] DEBUG [detached HEAD df0b051] merge master -Dorg -Ssuccess-only 2026-07-29 13:14:27,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:14:27,050 [ scc.repo] DEBUG ## PRs found: 2026-07-29 13:14:27,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2026-07-29 13:14:27,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2026-07-29 13:14:27,888 [ scc.repo] DEBUG ## Branches found: 2026-07-29 13:14:27,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-07-29 13:14:27,888 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:14:27,888 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:27,910 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-29 13:14:27,932 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-29 13:14:27,932 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-29 13:14:27,981 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-29 13:14:28,201 [ scc.git] DEBUG Updating bdfeb5e..fc9ff96 2026-07-29 13:14:28,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/36 HTTP/1.1" 200 None 2026-07-29 13:14:29,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/35 HTTP/1.1" 200 None 2026-07-29 13:14:29,867 [ scc.git] DEBUG ## Unique users: [] 2026-07-29 13:14:29,867 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:14:29,867 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:29,892 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-29 13:14:30,080 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:14:30,080 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:30,102 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:14:30,277 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-29 13:14:30,366 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a62850950> has no local changes 2026-07-29 13:14:30,366 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Generated by OMERO-plugins-push#22 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/)' 2026-07-29 13:14:30,549 [ scc.git] DEBUG [detached HEAD 49afd94] merge master -Dorg -Ssuccess-only 2026-07-29 13:14:30,551 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:14:30,551 [ scc.repo] DEBUG ## PRs found: 2026-07-29 13:14:30,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2026-07-29 13:14:31,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2026-07-29 13:14:31,446 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:14:32,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-07-29 13:14:32,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:14:33,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:14:33,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-07-29 13:14:34,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:14:34,423 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-29 13:14:34,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2026-07-29 13:14:35,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2026-07-29 13:14:36,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-07-29 13:14:36,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:14:37,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-07-29 13:14:37,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:14:37,608 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2026-07-29 13:14:37,608 [ scc.repo] DEBUG ## Branches found: 2026-07-29 13:14:37,608 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-07-29 13:14:37,608 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:14:37,608 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:37,632 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-29 13:14:37,654 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-29 13:14:37,654 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-29 13:14:37,686 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-29 13:14:37,756 [ scc.git] DEBUG Already up to date. 2026-07-29 13:14:37,757 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-07-29 13:14:38,339 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-07-29 13:14:38,339 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-07-29 13:14:38,367 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-07-29 13:14:38,770 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-07-29 13:14:38,770 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-07-29 13:14:38,807 [ scc.git] DEBUG ## Unique users: [] 2026-07-29 13:14:38,807 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:14:38,807 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:38,825 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-07-29 13:14:38,873 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:38,889 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-07-29 13:14:39,176 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2026-07-29 13:14:39,176 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2026-07-29 13:14:39,176 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2026-07-29 13:14:39,176 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2026-07-29 13:14:39,176 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2026-07-29 13:14:39,176 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2026-07-29 13:14:39,176 [ scc.git] DEBUG Auto-merging setup.py 2026-07-29 13:14:39,176 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2026-07-29 13:14:39,198 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-29 13:14:39,199 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-29 13:14:39,237 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2026-07-29 13:14:39,407 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2026-07-29 13:14:39,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:14:39,627 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-07-29 13:14:39,660 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2026-07-29 13:14:39,690 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#22](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/consoleText) for more details. Possible conflicts: - Upstream changes - setup.py - omero_signup/views.py - omero_signup/signup_settings.py - omero_signup/urls.py --conflicts 2026-07-29 13:14:39,702 [ scc.config] DEBUG Found github.token 2026-07-29 13:14:39,702 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2026-07-29 13:14:39,702 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-07-29 13:14:39,727 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:39,743 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-07-29 13:14:39,944 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:14:40,016 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-29 13:14:40,017 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-29 13:14:40,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:14:40,226 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-29 13:14:40,354 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:14:40,354 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:40,367 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:14:40,479 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-29 13:14:40,547 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a6281d110> has no local changes 2026-07-29 13:14:40,548 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#22 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/)' 2026-07-29 13:14:40,702 [ scc.git] DEBUG [detached HEAD fe3ddb4] merge master -Dorg -Ssuccess-only 2026-07-29 13:14:40,704 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:14:40,704 [ scc.repo] DEBUG ## PRs found: 2026-07-29 13:14:41,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2026-07-29 13:14:41,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2026-07-29 13:14:42,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2026-07-29 13:14:42,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2026-07-29 13:14:43,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-07-29 13:14:43,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:14:44,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-07-29 13:14:44,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/c18c080227e97899382d3464baa7c7885a621623?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:14:44,932 [ scc.repo] DEBUG - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-07-29 13:14:44,932 [ scc.repo] DEBUG ## Branches found: 2026-07-29 13:14:44,932 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-07-29 13:14:44,933 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:14:44,933 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:44,954 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-29 13:14:44,973 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-29 13:14:44,973 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-29 13:14:44,998 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-29 13:14:45,189 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2026-07-29 13:14:45,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2026-07-29 13:14:46,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2026-07-29 13:14:47,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2026-07-29 13:14:47,725 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-07-29 13:14:48,221 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2026-07-29 13:14:48,221 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-07-29 13:14:48,248 [ scc.git] DEBUG ## Unique users: [] 2026-07-29 13:14:48,248 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:14:48,248 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:48,261 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c18c080227e97899382d3464baa7c7885a621623' 2026-07-29 13:14:48,294 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:48,312 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (Add 'ms' target for ./docker) c18c080227e97899382d3464baa7c7885a621623' 2026-07-29 13:14:48,522 [ scc.git] DEBUG Auto-merging .github/workflows/main.yml 2026-07-29 13:14:48,593 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:14:48,685 [ scc.git] DEBUG .github/workflows/main.yml | 8 ++++++++ 2026-07-29 13:14:48,685 [ scc.git] DEBUG docker | 22 ++++++++++++++++++++++ 2026-07-29 13:14:48,685 [ scc.git] DEBUG ms/compose.yml | 11 +++++++++++ 2026-07-29 13:14:48,685 [ scc.git] DEBUG ms/example/Dockerfile | 13 +++++++++++++ 2026-07-29 13:14:48,685 [ scc.git] DEBUG ms/test | 2 ++ 2026-07-29 13:14:48,685 [ scc.git] DEBUG 5 files changed, 56 insertions(+) 2026-07-29 13:14:48,685 [ scc.git] DEBUG create mode 100644 ms/compose.yml 2026-07-29 13:14:48,685 [ scc.git] DEBUG create mode 100644 ms/example/Dockerfile 2026-07-29 13:14:48,685 [ scc.git] DEBUG create mode 100755 ms/test 2026-07-29 13:14:48,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:14:48,898 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-29 13:14:49,067 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:14:49,067 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:49,092 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:14:49,241 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-29 13:14:49,333 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a628f9890> has no local changes 2026-07-29 13:14:49,333 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Generated by OMERO-plugins-push#22 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/)' 2026-07-29 13:14:49,511 [ scc.git] DEBUG [detached HEAD 43d866e] merge master -Dorg -Ssuccess-only 2026-07-29 13:14:49,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:14:49,514 [ scc.repo] DEBUG ## PRs found: 2026-07-29 13:14:49,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2026-07-29 13:14:50,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2026-07-29 13:14:50,338 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:14:51,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-07-29 13:14:51,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:14:52,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:14:52,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-07-29 13:14:53,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:14:53,237 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-29 13:14:53,237 [ scc.repo] DEBUG ## Branches found: 2026-07-29 13:14:53,237 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-07-29 13:14:53,238 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:14:53,238 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:53,262 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-29 13:14:53,286 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-29 13:14:53,286 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-29 13:14:53,311 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-29 13:14:53,365 [ scc.git] DEBUG Already up to date. 2026-07-29 13:14:53,365 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-07-29 13:14:53,795 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2026-07-29 13:14:53,796 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-07-29 13:14:53,816 [ scc.git] DEBUG ## Unique users: [] 2026-07-29 13:14:53,816 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:14:53,816 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:53,829 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-07-29 13:14:53,847 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:53,859 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-07-29 13:14:54,038 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:14:54,092 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-29 13:14:54,092 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-29 13:14:54,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:14:54,273 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-29 13:14:54,409 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:14:54,409 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:54,454 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:14:54,568 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-29 13:14:54,618 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a628d7d90> has no local changes 2026-07-29 13:14:54,618 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#22 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/)' 2026-07-29 13:14:54,758 [ scc.git] DEBUG [detached HEAD 7198857] merge master -Dorg -Ssuccess-only 2026-07-29 13:14:54,761 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:14:54,761 [ scc.repo] DEBUG ## PRs found: 2026-07-29 13:14:55,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2026-07-29 13:14:55,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2026-07-29 13:14:55,604 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:14:56,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-07-29 13:14:56,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:14:57,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:14:58,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-07-29 13:14:58,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:14:58,484 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-29 13:14:58,484 [ scc.repo] DEBUG ## Branches found: 2026-07-29 13:14:58,484 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-07-29 13:14:58,485 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:14:58,485 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:58,506 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-29 13:14:58,534 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-29 13:14:58,534 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-29 13:14:58,582 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-29 13:14:58,761 [ scc.git] DEBUG Updating deab817..160d894 2026-07-29 13:14:59,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2026-07-29 13:14:59,341 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-07-29 13:14:59,761 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2026-07-29 13:14:59,761 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-07-29 13:14:59,783 [ scc.git] DEBUG ## Unique users: [] 2026-07-29 13:14:59,783 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:14:59,783 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:59,805 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-07-29 13:14:59,837 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:14:59,850 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-07-29 13:15:00,051 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:15:00,131 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-29 13:15:00,131 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-29 13:15:00,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:00,323 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-29 13:15:00,442 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:15:00,442 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:15:00,455 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:15:00,556 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-29 13:15:00,605 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a628e5990> has no local changes 2026-07-29 13:15:00,606 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#22 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/)' 2026-07-29 13:15:00,757 [ scc.git] DEBUG [detached HEAD 7dcb67f] merge master -Dorg -Ssuccess-only 2026-07-29 13:15:00,759 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:00,759 [ scc.git] INFO Overriding base-branch from master to main 2026-07-29 13:15:00,759 [ scc.repo] DEBUG ## PRs found: 2026-07-29 13:15:01,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2026-07-29 13:15:01,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2026-07-29 13:15:02,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2026-07-29 13:15:02,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-07-29 13:15:03,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:15:03,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:15:04,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-07-29 13:15:04,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:15:04,937 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2026-07-29 13:15:05,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2026-07-29 13:15:05,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2026-07-29 13:15:06,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2026-07-29 13:15:07,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-07-29 13:15:07,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:15:08,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-07-29 13:15:08,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:15:08,524 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-07-29 13:15:08,524 [ scc.repo] DEBUG ## Branches found: 2026-07-29 13:15:08,524 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-07-29 13:15:08,525 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:15:08,525 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:15:08,548 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2026-07-29 13:15:08,577 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-29 13:15:08,577 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2026-07-29 13:15:08,604 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2026-07-29 13:15:08,763 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2026-07-29 13:15:09,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2026-07-29 13:15:10,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2026-07-29 13:15:10,314 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2026-07-29 13:15:10,821 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-07-29 13:15:10,822 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2026-07-29 13:15:10,847 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2026-07-29 13:15:11,531 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-07-29 13:15:11,531 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2026-07-29 13:15:11,553 [ scc.git] DEBUG ## Unique users: [] 2026-07-29 13:15:11,553 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:15:11,553 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:15:11,568 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-07-29 13:15:11,599 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:15:11,615 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-07-29 13:15:11,863 [ scc.git] DEBUG Auto-merging README.rst 2026-07-29 13:15:11,863 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2026-07-29 13:15:11,863 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2026-07-29 13:15:11,863 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-07-29 13:15:11,885 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-29 13:15:11,886 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-29 13:15:11,926 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-07-29 13:15:12,089 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-07-29 13:15:12,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:12,287 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-07-29 13:15:12,326 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-07-29 13:15:12,354 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#22](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2026-07-29 13:15:12,371 [ scc.config] DEBUG Found github.token 2026-07-29 13:15:12,371 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2026-07-29 13:15:12,372 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-07-29 13:15:12,442 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:15:12,462 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-07-29 13:15:12,717 [ scc.git] DEBUG Auto-merging README.rst 2026-07-29 13:15:12,717 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-07-29 13:15:12,787 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:15:12,872 [ scc.git] DEBUG README.rst | 3 + 2026-07-29 13:15:12,872 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2026-07-29 13:15:12,872 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2026-07-29 13:15:12,872 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2026-07-29 13:15:12,872 [ scc.git] DEBUG setup.py | 5 +- 2026-07-29 13:15:12,872 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2026-07-29 13:15:12,872 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2026-07-29 13:15:13,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:13,079 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-29 13:15:13,261 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:15:13,261 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:15:13,277 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:15:13,399 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-29 13:15:13,479 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a606a4fd0> has no local changes 2026-07-29 13:15:13,479 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#22 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/)' 2026-07-29 13:15:13,663 [ scc.git] DEBUG [detached HEAD d022ad2] merge master -Dorg -Ssuccess-only 2026-07-29 13:15:13,665 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:13,666 [ scc.repo] DEBUG ## PRs found: 2026-07-29 13:15:13,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2026-07-29 13:15:14,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2026-07-29 13:15:14,495 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:15:15,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-07-29 13:15:15,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:15:16,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:15:16,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-07-29 13:15:17,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:15:17,290 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-29 13:15:17,290 [ scc.repo] DEBUG ## Branches found: 2026-07-29 13:15:17,290 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-07-29 13:15:17,291 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:15:17,291 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:15:17,312 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-29 13:15:17,338 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-29 13:15:17,338 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-29 13:15:17,366 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-29 13:15:17,439 [ scc.git] DEBUG Already up to date. 2026-07-29 13:15:17,439 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2026-07-29 13:15:17,922 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2026-07-29 13:15:17,922 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2026-07-29 13:15:17,951 [ scc.git] DEBUG ## Unique users: [] 2026-07-29 13:15:17,951 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:15:17,951 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:15:17,970 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-07-29 13:15:18,007 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:15:18,029 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-07-29 13:15:18,224 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:15:18,289 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-29 13:15:18,289 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-29 13:15:18,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:18,486 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-29 13:15:18,640 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:15:18,640 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:15:18,656 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:15:18,777 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-29 13:15:18,839 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a6281f910> has no local changes 2026-07-29 13:15:18,839 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#22 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/)' 2026-07-29 13:15:18,990 [ scc.git] DEBUG [detached HEAD df9aa0e] merge master -Dorg -Ssuccess-only 2026-07-29 13:15:18,992 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:18,992 [ scc.repo] DEBUG ## PRs found: 2026-07-29 13:15:19,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2026-07-29 13:15:19,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2026-07-29 13:15:19,826 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-29 13:15:20,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-07-29 13:15:21,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:15:21,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:15:22,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-07-29 13:15:22,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:15:22,691 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-29 13:15:22,691 [ scc.repo] DEBUG ## Branches found: 2026-07-29 13:15:22,691 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-07-29 13:15:22,692 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:15:22,692 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:15:22,712 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-29 13:15:22,735 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-29 13:15:22,736 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-29 13:15:22,776 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-29 13:15:22,829 [ scc.git] DEBUG Already up to date. 2026-07-29 13:15:22,829 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2026-07-29 13:15:23,257 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2026-07-29 13:15:23,257 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2026-07-29 13:15:23,283 [ scc.git] DEBUG ## Unique users: [] 2026-07-29 13:15:23,283 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:15:23,283 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:15:23,297 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-07-29 13:15:23,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:15:23,334 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-07-29 13:15:23,530 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:15:23,589 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-29 13:15:23,589 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-29 13:15:23,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:23,805 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-29 13:15:23,921 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:15:23,921 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:15:23,933 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:15:24,058 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-29 13:15:24,111 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a62a81890> has no local changes 2026-07-29 13:15:24,111 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#22 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/)' 2026-07-29 13:15:24,275 [ scc.git] DEBUG [detached HEAD 2e44967] merge master -Dorg -Ssuccess-only 2026-07-29 13:15:24,277 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:24,277 [ scc.repo] DEBUG ## PRs found: 2026-07-29 13:15:24,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2026-07-29 13:15:24,517 [ scc.repo] DEBUG ## Branches found: 2026-07-29 13:15:24,517 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-07-29 13:15:24,518 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:15:24,518 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:15:24,536 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-29 13:15:24,555 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-29 13:15:24,555 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-29 13:15:24,574 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-29 13:15:24,625 [ scc.git] DEBUG Already up to date. 2026-07-29 13:15:24,625 [ scc.git] DEBUG ## Unique users: [] 2026-07-29 13:15:24,625 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:15:24,625 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:15:24,638 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-29 13:15:24,749 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:15:24,749 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:15:24,762 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:15:24,873 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-29 13:15:24,970 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a606e84d0> has no local changes 2026-07-29 13:15:24,970 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#22 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/)' 2026-07-29 13:15:25,098 [ scc.git] DEBUG [detached HEAD 2bc1dac] merge master -Dorg -Ssuccess-only 2026-07-29 13:15:25,100 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:25,100 [ scc.git] INFO Overriding base-branch from master to develop 2026-07-29 13:15:25,100 [ scc.repo] DEBUG ## PRs found: 2026-07-29 13:15:25,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2026-07-29 13:15:25,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/232 HTTP/1.1" 200 None 2026-07-29 13:15:26,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None 2026-07-29 13:15:27,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-29 13:15:27,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-29 13:15:28,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None 2026-07-29 13:15:28,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/e190baa635f40826befc84321719243092ee849f?per_page=1 HTTP/1.1" 200 2 2026-07-29 13:15:28,726 [ scc.repo] DEBUG - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' 2026-07-29 13:15:28,726 [ scc.repo] DEBUG ## Branches found: 2026-07-29 13:15:28,726 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-07-29 13:15:28,727 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:15:28,727 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:15:28,745 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-07-29 13:15:28,765 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-29 13:15:28,765 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-07-29 13:15:28,811 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-07-29 13:15:29,077 [ scc.git] DEBUG Updating 4b4c755..5b4d768 2026-07-29 13:15:29,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-07-29 13:15:30,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-07-29 13:15:31,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-07-29 13:15:32,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-07-29 13:15:33,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2026-07-29 13:15:33,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2026-07-29 13:15:34,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2026-07-29 13:15:34,959 [ scc.git] DEBUG Calling 'git fetch origin pull/232/head' 2026-07-29 13:15:35,612 [ scc.git] DEBUG From https://github.com/ome/scripts 2026-07-29 13:15:35,612 [ scc.git] DEBUG * branch refs/pull/232/head -> FETCH_HEAD 2026-07-29 13:15:35,637 [ scc.git] DEBUG ## Unique users: [] 2026-07-29 13:15:35,651 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:15:35,651 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:15:35,664 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e190baa635f40826befc84321719243092ee849f' 2026-07-29 13:15:35,695 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:15:35,709 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 232 (Add Auto header detection to `Populate_Metadata.py`) e190baa635f40826befc84321719243092ee849f' 2026-07-29 13:15:35,936 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-29 13:15:36,004 [ scc.git] DEBUG omero/import_scripts/Populate_Metadata.py | 26 ++++++++++++++++++++++++-- 2026-07-29 13:15:36,004 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2026-07-29 13:15:36,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:36,213 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-29 13:15:36,340 [ scc.git] DEBUG Get sha1 of %s 2026-07-29 13:15:36,340 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-29 13:15:36,353 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:15:36,454 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-29 13:15:36,533 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a606ef2d0> has no local changes 2026-07-29 13:15:36,533 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' Generated by OMERO-plugins-push#22 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/)' 2026-07-29 13:15:36,693 [ scc.git] DEBUG [detached HEAD de403a5] merge master -Dorg -Ssuccess-only 2026-07-29 13:15:36,695 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:36,695 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-29 13:15:37,004 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2026-07-29 13:15:37,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:37,232 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2026-07-29 13:15:37,240 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2026-07-29 13:15:37,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:37,693 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2026-07-29 13:15:37,700 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2026-07-29 13:15:38,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:38,144 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2026-07-29 13:15:38,151 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2026-07-29 13:15:38,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:38,761 [ scc.config] DEBUG Found submodule.omero-figure.url 2026-07-29 13:15:39,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:39,188 [ scc.config] DEBUG Found submodule.omero-figure.branch 2026-07-29 13:15:39,201 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2026-07-29 13:15:39,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:39,650 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2026-07-29 13:15:39,664 [ scc.config] DEBUG Found submodule.omero-gallery.url 2026-07-29 13:15:40,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:40,092 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2026-07-29 13:15:40,099 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2026-07-29 13:15:40,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:40,539 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2026-07-29 13:15:40,549 [ scc.config] DEBUG Found submodule.omero-mapr.url 2026-07-29 13:15:40,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:40,987 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2026-07-29 13:15:40,995 [ scc.config] DEBUG Found submodule.omero-metadata.url 2026-07-29 13:15:41,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:41,437 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2026-07-29 13:15:41,445 [ scc.config] DEBUG Found submodule.omero-parade.url 2026-07-29 13:15:41,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:41,891 [ scc.config] DEBUG Found submodule.omero-parade.branch 2026-07-29 13:15:41,899 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2026-07-29 13:15:42,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:42,329 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2026-07-29 13:15:42,337 [ scc.config] DEBUG Found submodule.omero-rois.url 2026-07-29 13:15:42,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:42,790 [ scc.config] DEBUG Found submodule.omero-signup.url 2026-07-29 13:15:43,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:43,226 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2026-07-29 13:15:43,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:43,666 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2026-07-29 13:15:43,676 [ scc.config] DEBUG Found submodule.omero-upload.url 2026-07-29 13:15:44,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:44,121 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2026-07-29 13:15:44,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:44,545 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2026-07-29 13:15:44,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:44,987 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2026-07-29 13:15:44,995 [ scc.config] DEBUG Found submodule.omero-weberror.url 2026-07-29 13:15:45,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:45,460 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2026-07-29 13:15:45,472 [ scc.config] DEBUG Found submodule.omero-webtest.url 2026-07-29 13:15:45,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:45,912 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2026-07-29 13:15:45,922 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2026-07-29 13:15:46,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:46,359 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2026-07-29 13:15:46,372 [ scc.config] DEBUG Found submodule.scripts.url 2026-07-29 13:15:46,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-29 13:15:46,805 [ scc.config] DEBUG Found submodule.scripts.branch 2026-07-29 13:15:46,805 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-29 13:15:48,948 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a62a2bd10> has local changes 2026-07-29 13:15:48,948 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' - PR 196 will-moore 'Storage options only if needed' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Updating 9cc36cde..18887279 Previously merged: - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' - PR 691 dependabot[bot] 'Bump esbuild and vite' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 692 will-moore 'colorbar lut background fix' - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' - PR 696 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.12' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7a798cee..cae0b026 Previously merged: - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' - PR 529 will-moore 'Image id and roi id initial params' - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 471 will-moore 'Z projection disabled tooltip' - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' - PR 535 dependabot[bot] 'Bump tmp and eslint' - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' - PR 541 will-moore 'Only add channel to tile request string if active' - PR 546 will-moore 'Use POST data for saveImgRdef params' - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' - PR 551 dependabot[bot] 'Bump body-parser from 1.20.5 to 1.20.6' Conflicting PRs (not included): - PR 532 will-moore 'Zarr layers' - PR 544 dependabot[bot] 'Bump js-yaml, mocha and eslint' - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.3 to 1.10.0' - PR 550 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.6' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' Generated by OMERO-plugins-push#22 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/22/)' 2026-07-29 13:15:49,477 [ scc.git] DEBUG [detached HEAD aadc686] merge master -Dorg -Ssuccess-only 2026-07-29 13:15:49,477 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2026-07-29 13:15:49,479 [ scc.merge] INFO Repository: ome/omero-plugins 2026-07-29 13:15:49,479 [ scc.merge] INFO Already up to date. 2026-07-29 13:15:49,479 [ scc.merge] INFO 2026-07-29 13:15:49,479 [ scc.merge] INFO Merged PRs: 2026-07-29 13:15:49,479 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-07-29 13:15:49,479 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-07-29 13:15:49,479 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-07-29 13:15:49,479 [ scc.merge] INFO 2026-07-29 13:15:49,479 [ scc.merge] INFO Repository: ome/minimal-omero-client 2026-07-29 13:15:49,479 [ scc.merge] INFO Already up to date. 2026-07-29 13:15:49,479 [ scc.merge] INFO 2026-07-29 13:15:49,479 [ scc.merge] INFO 2026-07-29 13:15:49,479 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2026-07-29 13:15:49,479 [ scc.merge] INFO Excluded PRs: 2026-07-29 13:15:49,479 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2026-07-29 13:15:49,479 [ scc.merge] INFO Already up to date. 2026-07-29 13:15:49,479 [ scc.merge] INFO 2026-07-29 13:15:49,479 [ scc.merge] INFO Merged PRs: 2026-07-29 13:15:49,479 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-29 13:15:49,479 [ scc.merge] INFO 2026-07-29 13:15:49,479 [ scc.merge] INFO Repository: ome/omero-cli-render 2026-07-29 13:15:49,479 [ scc.merge] INFO Excluded PRs: 2026-07-29 13:15:49,479 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2026-07-29 13:15:49,479 [ scc.merge] INFO Updating ce6e13c..68b7303 2026-07-29 13:15:49,479 [ scc.merge] INFO Previously merged: 2026-07-29 13:15:49,479 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2026-07-29 13:15:49,479 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2026-07-29 13:15:49,479 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2026-07-29 13:15:49,479 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2026-07-29 13:15:49,479 [ scc.merge] INFO 2026-07-29 13:15:49,479 [ scc.merge] INFO Merged PRs: 2026-07-29 13:15:49,479 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2026-07-29 13:15:49,479 [ scc.merge] INFO 2026-07-29 13:15:49,479 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2026-07-29 13:15:49,479 [ scc.merge] INFO Excluded PRs: 2026-07-29 13:15:49,479 [ scc.merge] INFO - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) 2026-07-29 13:15:49,479 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' (exclude comment) 2026-07-29 13:15:49,479 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2026-07-29 13:15:49,479 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2026-07-29 13:15:49,479 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-07-29 13:15:49,479 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2026-07-29 13:15:49,479 [ scc.merge] INFO Updating 11d3587..9f844b8 2026-07-29 13:15:49,479 [ scc.merge] INFO Previously merged: 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 192 jburel 'Set Omero pixel size' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-07-29 13:15:49,480 [ scc.merge] INFO 2026-07-29 13:15:49,480 [ scc.merge] INFO Merged PRs: 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 193 dominikl 'Only parse import uris if stated' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 196 will-moore 'Storage options only if needed' 2026-07-29 13:15:49,480 [ scc.merge] INFO 2026-07-29 13:15:49,480 [ scc.merge] INFO Conflicting PRs (not included): 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-07-29 13:15:49,480 [ scc.merge] INFO 2026-07-29 13:15:49,480 [ scc.merge] INFO Repository: ome/omero-figure 2026-07-29 13:15:49,480 [ scc.merge] INFO Updating 9cc36cde..18887279 2026-07-29 13:15:49,480 [ scc.merge] INFO Previously merged: 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 691 dependabot[bot] 'Bump esbuild and vite' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 685 will-moore 'Fix static files links for release build' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 683 will-moore 'Add touch support for clicking on single panel' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 680 will-moore 'Use --pre install for export script in README' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 666 will-moore 'Standalone app' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 676 dependabot[bot] 'Bump picomatch' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 669 will-moore 'Standalone python script' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 662 will-moore 'Export script handles OME-zarr images' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 663 will-moore 'Zarr' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 667 Tom-TBT 'Label suggestion interface' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-07-29 13:15:49,480 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 664 Nirkan 'Handle many channels ' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-07-29 13:15:49,481 [ scc.merge] INFO 2026-07-29 13:15:49,481 [ scc.merge] INFO Merged PRs: 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 692 will-moore 'colorbar lut background fix' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 696 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.12' 2026-07-29 13:15:49,481 [ scc.merge] INFO 2026-07-29 13:15:49,481 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2026-07-29 13:15:49,481 [ scc.merge] INFO Already up to date. 2026-07-29 13:15:49,481 [ scc.merge] INFO 2026-07-29 13:15:49,481 [ scc.merge] INFO Merged PRs: 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-29 13:15:49,481 [ scc.merge] INFO 2026-07-29 13:15:49,481 [ scc.merge] INFO Repository: ome/omero-gallery 2026-07-29 13:15:49,481 [ scc.merge] INFO Already up to date. 2026-07-29 13:15:49,481 [ scc.merge] INFO 2026-07-29 13:15:49,481 [ scc.merge] INFO Merged PRs: 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-07-29 13:15:49,481 [ scc.merge] INFO 2026-07-29 13:15:49,481 [ scc.merge] INFO Conflicting PRs (not included): 2026-07-29 13:15:49,481 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-07-29 13:15:49,482 [ scc.merge] INFO 2026-07-29 13:15:49,482 [ scc.merge] INFO Repository: ome/omero-iviewer 2026-07-29 13:15:49,482 [ scc.merge] INFO Excluded PRs: 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft) 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2026-07-29 13:15:49,482 [ scc.merge] INFO Updating 7a798cee..cae0b026 2026-07-29 13:15:49,482 [ scc.merge] INFO Previously merged: 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 529 will-moore 'Image id and roi id initial params' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 517 will-moore 'Fix roi link permissions' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-07-29 13:15:49,482 [ scc.merge] INFO 2026-07-29 13:15:49,482 [ scc.merge] INFO Merged PRs: 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 535 dependabot[bot] 'Bump tmp and eslint' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 541 will-moore 'Only add channel to tile request string if active' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 546 will-moore 'Use POST data for saveImgRdef params' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 551 dependabot[bot] 'Bump body-parser from 1.20.5 to 1.20.6' 2026-07-29 13:15:49,482 [ scc.merge] INFO 2026-07-29 13:15:49,482 [ scc.merge] INFO Conflicting PRs (not included): 2026-07-29 13:15:49,482 [ scc.merge] INFO - PR 532 will-moore 'Zarr layers' 2026-07-29 13:15:49,483 [ scc.merge] INFO - PR 544 dependabot[bot] 'Bump js-yaml, mocha and eslint' 2026-07-29 13:15:49,483 [ scc.merge] INFO - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.3 to 1.10.0' 2026-07-29 13:15:49,483 [ scc.merge] INFO - PR 550 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.6' 2026-07-29 13:15:49,483 [ scc.merge] INFO 2026-07-29 13:15:49,483 [ scc.merge] INFO Repository: ome/omero-mapr 2026-07-29 13:15:49,483 [ scc.merge] INFO Excluded PRs: 2026-07-29 13:15:49,483 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2026-07-29 13:15:49,483 [ scc.merge] INFO Already up to date. 2026-07-29 13:15:49,483 [ scc.merge] INFO 2026-07-29 13:15:49,483 [ scc.merge] INFO Merged PRs: 2026-07-29 13:15:49,483 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2026-07-29 13:15:49,483 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-07-29 13:15:49,483 [ scc.merge] INFO 2026-07-29 13:15:49,483 [ scc.merge] INFO Conflicting PRs (not included): 2026-07-29 13:15:49,483 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-29 13:15:49,483 [ scc.merge] INFO 2026-07-29 13:15:49,483 [ scc.merge] INFO Repository: ome/omero-metadata 2026-07-29 13:15:49,483 [ scc.merge] INFO Updating 3cd120c..55060a2 2026-07-29 13:15:49,483 [ scc.merge] INFO Previously merged: 2026-07-29 13:15:49,483 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-07-29 13:15:49,483 [ scc.merge] INFO 2026-07-29 13:15:49,483 [ scc.merge] INFO Merged PRs: 2026-07-29 13:15:49,483 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-07-29 13:15:49,483 [ scc.merge] INFO 2026-07-29 13:15:49,483 [ scc.merge] INFO Conflicting PRs (not included): 2026-07-29 13:15:49,483 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-07-29 13:15:49,483 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-07-29 13:15:49,483 [ scc.merge] INFO 2026-07-29 13:15:49,483 [ scc.merge] INFO Repository: ome/omero-parade 2026-07-29 13:15:49,483 [ scc.merge] INFO Excluded PRs: 2026-07-29 13:15:49,483 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2026-07-29 13:15:49,483 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2026-07-29 13:15:49,483 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2026-07-29 13:15:49,483 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2026-07-29 13:15:49,483 [ scc.merge] INFO Already up to date. 2026-07-29 13:15:49,483 [ scc.merge] INFO 2026-07-29 13:15:49,483 [ scc.merge] INFO Merged PRs: 2026-07-29 13:15:49,483 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-07-29 13:15:49,483 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-07-29 13:15:49,483 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-07-29 13:15:49,483 [ scc.merge] INFO 2026-07-29 13:15:49,483 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2026-07-29 13:15:49,483 [ scc.merge] INFO Already up to date. 2026-07-29 13:15:49,483 [ scc.merge] INFO 2026-07-29 13:15:49,483 [ scc.merge] INFO Merged PRs: 2026-07-29 13:15:49,483 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-29 13:15:49,483 [ scc.merge] INFO 2026-07-29 13:15:49,483 [ scc.merge] INFO Repository: ome/omero-rois 2026-07-29 13:15:49,483 [ scc.merge] INFO Excluded PRs: 2026-07-29 13:15:49,483 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-07-29 13:15:49,483 [ scc.merge] INFO Updating bdfeb5e..fc9ff96 2026-07-29 13:15:49,484 [ scc.merge] INFO Previously merged: 2026-07-29 13:15:49,484 [ scc.merge] INFO - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' 2026-07-29 13:15:49,484 [ scc.merge] INFO - PR 35 will-moore 'Add roi to array functions' 2026-07-29 13:15:49,484 [ scc.merge] INFO 2026-07-29 13:15:49,484 [ scc.merge] INFO 2026-07-29 13:15:49,484 [ scc.merge] INFO Repository: ome/omero-signup 2026-07-29 13:15:49,484 [ scc.merge] INFO Already up to date. 2026-07-29 13:15:49,484 [ scc.merge] INFO 2026-07-29 13:15:49,484 [ scc.merge] INFO Merged PRs: 2026-07-29 13:15:49,484 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-29 13:15:49,484 [ scc.merge] INFO 2026-07-29 13:15:49,484 [ scc.merge] INFO Conflicting PRs (not included): 2026-07-29 13:15:49,484 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2026-07-29 13:15:49,484 [ scc.merge] INFO 2026-07-29 13:15:49,484 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2026-07-29 13:15:49,484 [ scc.merge] INFO Excluded PRs: 2026-07-29 13:15:49,484 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2026-07-29 13:15:49,484 [ scc.merge] INFO Updating cda3ec6..c8a0015 2026-07-29 13:15:49,484 [ scc.merge] INFO Previously merged: 2026-07-29 13:15:49,484 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2026-07-29 13:15:49,484 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2026-07-29 13:15:49,484 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2026-07-29 13:15:49,484 [ scc.merge] INFO 2026-07-29 13:15:49,484 [ scc.merge] INFO Merged PRs: 2026-07-29 13:15:49,484 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-07-29 13:15:49,484 [ scc.merge] INFO 2026-07-29 13:15:49,484 [ scc.merge] INFO Repository: ome/omero-upload 2026-07-29 13:15:49,484 [ scc.merge] INFO Already up to date. 2026-07-29 13:15:49,484 [ scc.merge] INFO 2026-07-29 13:15:49,484 [ scc.merge] INFO Merged PRs: 2026-07-29 13:15:49,484 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-29 13:15:49,484 [ scc.merge] INFO 2026-07-29 13:15:49,484 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2026-07-29 13:15:49,484 [ scc.merge] INFO Updating deab817..160d894 2026-07-29 13:15:49,484 [ scc.merge] INFO Previously merged: 2026-07-29 13:15:49,484 [ scc.merge] INFO - PR 20 jburel 'Build' 2026-07-29 13:15:49,484 [ scc.merge] INFO 2026-07-29 13:15:49,484 [ scc.merge] INFO Merged PRs: 2026-07-29 13:15:49,484 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-29 13:15:49,484 [ scc.merge] INFO 2026-07-29 13:15:49,484 [ scc.merge] INFO Repository: ome/omero-web-zarr 2026-07-29 13:15:49,484 [ scc.merge] INFO Excluded PRs: 2026-07-29 13:15:49,484 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2026-07-29 13:15:49,484 [ scc.merge] INFO Updating 8f3c313..4e1e685 2026-07-29 13:15:49,484 [ scc.merge] INFO Previously merged: 2026-07-29 13:15:49,484 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2026-07-29 13:15:49,484 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2026-07-29 13:15:49,484 [ scc.merge] INFO 2026-07-29 13:15:49,484 [ scc.merge] INFO Merged PRs: 2026-07-29 13:15:49,484 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2026-07-29 13:15:49,484 [ scc.merge] INFO 2026-07-29 13:15:49,485 [ scc.merge] INFO Conflicting PRs (not included): 2026-07-29 13:15:49,485 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-07-29 13:15:49,485 [ scc.merge] INFO 2026-07-29 13:15:49,485 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2026-07-29 13:15:49,485 [ scc.merge] INFO Already up to date. 2026-07-29 13:15:49,485 [ scc.merge] INFO 2026-07-29 13:15:49,485 [ scc.merge] INFO Merged PRs: 2026-07-29 13:15:49,485 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-29 13:15:49,485 [ scc.merge] INFO 2026-07-29 13:15:49,485 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2026-07-29 13:15:49,485 [ scc.merge] INFO Already up to date. 2026-07-29 13:15:49,485 [ scc.merge] INFO 2026-07-29 13:15:49,485 [ scc.merge] INFO Merged PRs: 2026-07-29 13:15:49,485 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-29 13:15:49,485 [ scc.merge] INFO 2026-07-29 13:15:49,485 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2026-07-29 13:15:49,485 [ scc.merge] INFO Already up to date. 2026-07-29 13:15:49,485 [ scc.merge] INFO 2026-07-29 13:15:49,485 [ scc.merge] INFO 2026-07-29 13:15:49,485 [ scc.merge] INFO Repository: ome/scripts 2026-07-29 13:15:49,485 [ scc.merge] INFO Updating 4b4c755..5b4d768 2026-07-29 13:15:49,485 [ scc.merge] INFO Previously merged: 2026-07-29 13:15:49,485 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-07-29 13:15:49,485 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-07-29 13:15:49,485 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-07-29 13:15:49,485 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-07-29 13:15:49,485 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2026-07-29 13:15:49,485 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2026-07-29 13:15:49,485 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2026-07-29 13:15:49,485 [ scc.merge] INFO 2026-07-29 13:15:49,485 [ scc.merge] INFO Merged PRs: 2026-07-29 13:15:49,485 [ scc.merge] INFO - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' 2026-07-29 13:15:49,485 [ scc.merge] INFO 2026-07-29 13:15:49,485 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-07-29 13:15:49,485 [ scc.git] DEBUG Calling 'git remote' 2026-07-29 13:15:49,498 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-07-29 13:15:49,498 [ scc.git] DEBUG Calling 'git remote' 2026-07-29 13:15:49,513 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:49,513 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-07-29 13:15:49,513 [ scc.git] DEBUG Calling 'git remote' 2026-07-29 13:15:49,528 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:49,528 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-07-29 13:15:49,528 [ scc.git] DEBUG Calling 'git remote' 2026-07-29 13:15:49,543 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:49,543 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-07-29 13:15:49,543 [ scc.git] DEBUG Calling 'git remote' 2026-07-29 13:15:49,559 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:49,559 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-07-29 13:15:49,559 [ scc.git] DEBUG Calling 'git remote' 2026-07-29 13:15:49,574 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:49,574 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-07-29 13:15:49,574 [ scc.git] DEBUG Calling 'git remote' 2026-07-29 13:15:49,590 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:49,590 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-07-29 13:15:49,590 [ scc.git] DEBUG Calling 'git remote' 2026-07-29 13:15:49,604 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:49,604 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-07-29 13:15:49,604 [ scc.git] DEBUG Calling 'git remote' 2026-07-29 13:15:49,620 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:49,620 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-07-29 13:15:49,620 [ scc.git] DEBUG Calling 'git remote' 2026-07-29 13:15:49,635 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:49,635 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-07-29 13:15:49,635 [ scc.git] DEBUG Calling 'git remote' 2026-07-29 13:15:49,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:49,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-07-29 13:15:49,653 [ scc.git] DEBUG Calling 'git remote' 2026-07-29 13:15:49,668 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:49,668 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-07-29 13:15:49,668 [ scc.git] DEBUG Calling 'git remote' 2026-07-29 13:15:49,686 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:49,686 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-07-29 13:15:49,686 [ scc.git] DEBUG Calling 'git remote' 2026-07-29 13:15:49,700 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:49,700 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-07-29 13:15:49,701 [ scc.git] DEBUG Calling 'git remote' 2026-07-29 13:15:49,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:49,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-07-29 13:15:49,717 [ scc.git] DEBUG Calling 'git remote' 2026-07-29 13:15:49,736 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:49,736 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-07-29 13:15:49,736 [ scc.git] DEBUG Calling 'git remote' 2026-07-29 13:15:49,759 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:49,759 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-07-29 13:15:49,759 [ scc.git] DEBUG Calling 'git remote' 2026-07-29 13:15:49,783 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:49,783 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-07-29 13:15:49,783 [ scc.git] DEBUG Calling 'git remote' 2026-07-29 13:15:49,805 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:49,805 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-07-29 13:15:49,805 [ scc.git] DEBUG Calling 'git remote' 2026-07-29 13:15:49,828 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:49,828 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-07-29 13:15:49,828 [ scc.git] DEBUG Calling 'git remote' 2026-07-29 13:15:49,851 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:49,851 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-07-29 13:15:49,851 [ scc.git] DEBUG Calling 'git remote' 2026-07-29 13:15:49,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-29 13:15:49,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-07-29 13:15:49,872 [ scc.git] DEBUG Calling 'git remote' 2026-07-29 13:15:49,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '8.0.1.rc2' to '8.0.1rc2' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '8.0.1.rc2' to '8.0.1rc2' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.11.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 168527e] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798cee nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD bf3ff08] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-07-29 13:17:00,419 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-07-29 13:17:10,897 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-07-29 13:17:13,734 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-07-29 13:17:19,090 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-07-29 13:18:14,020 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS