Started by upstream project "Trigger" build number 45 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified Cloning the remote Git repository Cloning with configured refspecs honoured and without tags Cloning repository https://github.com/ome/jenkins-library-recursivemerge.git > git init /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/80042be2aab2f4c47851263660cdf7971582cd0b3548009ec2196c6f3069ef1a # timeout=10 Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 25 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.3-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.3 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-46.0.3-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.23-py3-none-any.whl.metadata (993 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (37 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.1.4-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.8.1-py3-none-any.whl (432 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-46.0.3-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (151 kB) Using cached idna-3.11-py3-none-any.whl (71 kB) Using cached certifi-2026.1.4-py3-none-any.whl (152 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.23-py3-none-any.whl (118 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2026.1.4 cffi-2.0.0 charset_normalizer-3.4.4 cryptography-46.0.3 future-1.0.0 idna-3.11 pycparser-2.23 pyjwt-2.10.1 pynacl-1.6.2 requests-2.32.5 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-01-18 00:36:51,296 [ scc.config] DEBUG Found github.token 2026-01-18 00:36:51,298 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-01-18 00:36:51,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:36:51,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:36:52,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-01-18 00:36:52,304 [ scc.gh] DEBUG 4270 remaining from 5000 (Reset at 01:01 2026-01-18 00:36:52,304 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-18 00:36:52,307 [ scc.git] DEBUG Check current status 2026-01-18 00:36:52,307 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-18 00:36:52,309 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-01-18 00:36:52,309 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-18 00:36:52,354 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-01-18 00:36:52,357 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-01-18 00:36:52,360 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-01-18 00:36:52,363 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-01-18 00:36:52,366 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-01-18 00:36:52,369 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-01-18 00:36:52,372 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-01-18 00:36:52,374 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-01-18 00:36:52,377 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-01-18 00:36:52,380 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-01-18 00:36:52,383 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-01-18 00:36:52,385 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-01-18 00:36:52,388 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-01-18 00:36:52,391 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-01-18 00:36:52,394 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-01-18 00:36:52,397 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-01-18 00:36:52,399 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-01-18 00:36:52,402 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-01-18 00:36:52,404 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-01-18 00:36:52,407 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-01-18 00:36:52,409 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-01-18 00:36:52,413 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-01-18 00:36:52,415 [ scc.config] DEBUG Found remote.origin.url 2026-01-18 00:36:52,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-01-18 00:36:53,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-18 00:36:53,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-18 00:36:54,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-18 00:36:54,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-18 00:36:54,544 [ scc.git] DEBUG Resetting... 2026-01-18 00:36:54,545 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-01-18 00:36:54,552 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-01-18 00:36:54,552 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-01-18 00:36:54,651 [ scc.git] DEBUG Check current status 2026-01-18 00:36:54,651 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-18 00:36:54,653 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-01-18 00:36:54,654 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-18 00:36:54,697 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-01-18 00:36:54,700 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-01-18 00:36:54,703 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-01-18 00:36:54,705 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-01-18 00:36:54,709 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-01-18 00:36:54,711 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-01-18 00:36:54,714 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-01-18 00:36:54,717 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-01-18 00:36:54,720 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-01-18 00:36:54,722 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-01-18 00:36:54,725 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-01-18 00:36:54,728 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-01-18 00:36:54,731 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-01-18 00:36:54,733 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-01-18 00:36:54,736 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-01-18 00:36:54,739 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-01-18 00:36:54,741 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-01-18 00:36:54,744 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-01-18 00:36:54,746 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-01-18 00:36:54,749 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-01-18 00:36:54,751 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-01-18 00:36:54,754 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-01-18 00:36:54,755 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-01-18 00:36:54,755 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-01-18 00:36:54,755 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-01-18 00:36:54,755 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-01-18 00:36:54,755 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-01-18 00:36:54,755 [ scc.repo] DEBUG ## PRs found: 2026-01-18 00:36:55,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-01-18 00:36:55,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-01-18 00:36:55,574 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:36:55,574 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-01-18 00:36:56,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-01-18 00:36:56,044 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:36:56,045 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-01-18 00:36:56,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-01-18 00:36:56,543 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:36:56,543 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-01-18 00:36:56,543 [ scc.repo] DEBUG ## Branches found: 2026-01-18 00:36:56,544 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:36:56,544 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:36:56,546 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-18 00:36:56,548 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-18 00:36:56,548 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-18 00:36:56,551 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-18 00:36:56,554 [ scc.git] DEBUG Already up to date. 2026-01-18 00:36:56,554 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-01-18 00:36:56,818 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-01-18 00:36:56,818 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-01-18 00:36:56,822 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-01-18 00:36:57,080 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-01-18 00:36:57,080 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-01-18 00:36:57,084 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-01-18 00:36:57,342 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-01-18 00:36:57,343 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-01-18 00:36:57,346 [ scc.git] DEBUG ## Unique users: [] 2026-01-18 00:36:57,347 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:36:57,347 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:36:57,349 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-01-18 00:36:57,351 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:36:57,353 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-01-18 00:36:57,367 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:36:57,370 [ scc.git] DEBUG scripts | 2 +- 2026-01-18 00:36:57,370 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-18 00:36:57,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:36:57,527 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-01-18 00:36:57,530 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:36:57,532 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-01-18 00:36:57,546 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:36:57,548 [ scc.git] DEBUG omero-figure | 2 +- 2026-01-18 00:36:57,548 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-18 00:36:57,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:36:57,913 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-01-18 00:36:57,916 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:36:57,918 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-01-18 00:36:57,932 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:36:57,936 [ scc.git] DEBUG omero-iviewer | 2 +- 2026-01-18 00:36:57,936 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-18 00:36:58,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:36:58,302 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-18 00:36:58,360 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-01-18 00:36:58,384 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-01-18 00:36:58,397 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-01-18 00:36:58,398 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:36:58,398 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:36:58,400 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-18 00:36:58,477 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fb5556d8150> has no local changes 2026-01-18 00:36:58,477 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2026-01-18 00:36:58,546 [ scc.git] DEBUG [detached HEAD d9aa6de] merge master -Dorg -Snone 2026-01-18 00:36:58,546 [ scc.merge] INFO Repository: ome/omero-plugins 2026-01-18 00:36:58,546 [ scc.merge] INFO Already up to date. 2026-01-18 00:36:58,546 [ scc.merge] INFO 2026-01-18 00:36:58,546 [ scc.merge] INFO Merged PRs: 2026-01-18 00:36:58,546 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-01-18 00:36:58,546 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-01-18 00:36:58,546 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-01-18 00:36:58,546 [ scc.merge] INFO 2026-01-18 00:36:58,546 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-01-18 00:36:58,546 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' Submodule path 'omero-cli-zarr': checked out '37ea7000309b4f8b87c5122c138fb59b17ecf86b' Submodule path 'omero-figure': checked out 'ddcf816a934ca3f96d05d06cfe3c1fc46016f660' Submodule path 'omero-iviewer': checked out '5e2de43ad401fb00690a79644056e0ac15fabfd5' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out 'fb91f15608d9a2c3ef9e2f56b19d4f2c9d6ac3e6' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2026-01-18 00:37:05,235 [ scc.config] DEBUG Found github.token 2026-01-18 00:37:05,237 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-01-18 00:37:05,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:37:05,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:37:06,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-01-18 00:37:06,204 [ scc.gh] DEBUG 4256 remaining from 5000 (Reset at 01:01 2026-01-18 00:37:06,205 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-18 00:37:06,207 [ scc.git] DEBUG Check current status 2026-01-18 00:37:06,207 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-18 00:37:06,210 [ scc.git] DEBUG d9aa6de merge master -Dorg -Snone 2026-01-18 00:37:06,210 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-18 00:37:06,254 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-01-18 00:37:06,257 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-01-18 00:37:06,260 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2026-01-18 00:37:06,263 [ scc.git] DEBUG +37ea7000309b4f8b87c5122c138fb59b17ecf86b omero-cli-zarr (v0.7.0rc1-2-g37ea700) 2026-01-18 00:37:06,266 [ scc.git] DEBUG +ddcf816a934ca3f96d05d06cfe3c1fc46016f660 omero-figure (v7.3.0-1-gddcf816a) 2026-01-18 00:37:06,269 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-01-18 00:37:06,272 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-01-18 00:37:06,275 [ scc.git] DEBUG +5e2de43ad401fb00690a79644056e0ac15fabfd5 omero-iviewer (v0.16.0-20-g5e2de43) 2026-01-18 00:37:06,278 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-01-18 00:37:06,281 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2026-01-18 00:37:06,284 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-01-18 00:37:06,287 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-01-18 00:37:06,290 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-01-18 00:37:06,293 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-01-18 00:37:06,296 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2026-01-18 00:37:06,299 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-01-18 00:37:06,302 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2026-01-18 00:37:06,304 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2026-01-18 00:37:06,307 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-01-18 00:37:06,310 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-01-18 00:37:06,313 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-01-18 00:37:06,317 [ scc.git] DEBUG +fb91f15608d9a2c3ef9e2f56b19d4f2c9d6ac3e6 scripts (v5.9.1-20-gfb91f15) 2026-01-18 00:37:06,320 [ scc.config] DEBUG Found remote.origin.url 2026-01-18 00:37:06,320 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-01-18 00:37:06,322 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2026-01-18 00:37:06,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-01-18 00:37:07,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-18 00:37:07,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-18 00:37:08,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-18 00:37:08,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-18 00:37:08,561 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:37:08,631 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-01-18 00:37:08,631 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-18 00:37:08,633 [ scc.git] DEBUG Check current status 2026-01-18 00:37:08,633 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-18 00:37:08,635 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2026-01-18 00:37:08,636 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-18 00:37:08,673 [ scc.config] DEBUG Found remote.origin.url 2026-01-18 00:37:09,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2026-01-18 00:37:09,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-18 00:37:09,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-18 00:37:10,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-18 00:37:10,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-18 00:37:10,797 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:37:10,835 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:37:10,835 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-01-18 00:37:10,835 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-18 00:37:10,837 [ scc.git] DEBUG Check current status 2026-01-18 00:37:10,837 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-18 00:37:10,839 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2026-01-18 00:37:10,840 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-18 00:37:10,877 [ scc.config] DEBUG Found remote.origin.url 2026-01-18 00:37:11,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2026-01-18 00:37:11,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-18 00:37:12,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-18 00:37:12,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-18 00:37:13,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-18 00:37:13,046 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:37:13,083 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:37:13,084 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-01-18 00:37:13,084 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-18 00:37:13,086 [ scc.git] DEBUG Check current status 2026-01-18 00:37:13,086 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-18 00:37:13,088 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2026-01-18 00:37:13,088 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-18 00:37:13,126 [ scc.config] DEBUG Found remote.origin.url 2026-01-18 00:37:13,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2026-01-18 00:37:14,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-18 00:37:14,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-18 00:37:14,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-18 00:37:15,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-18 00:37:15,337 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:37:15,375 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:37:15,375 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-01-18 00:37:15,375 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-18 00:37:15,377 [ scc.git] DEBUG Check current status 2026-01-18 00:37:15,377 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-18 00:37:15,379 [ scc.git] DEBUG 37ea700 Bump version: 0.7.0rc1 → 0.7.1.dev0 2026-01-18 00:37:15,380 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-18 00:37:15,417 [ scc.config] DEBUG Found remote.origin.url 2026-01-18 00:37:15,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2026-01-18 00:37:16,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-18 00:37:16,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-18 00:37:17,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-18 00:37:17,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-18 00:37:17,577 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:37:17,614 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:37:17,615 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-01-18 00:37:17,615 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-18 00:37:17,617 [ scc.git] DEBUG Check current status 2026-01-18 00:37:17,617 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-18 00:37:17,619 [ scc.git] DEBUG ddcf816a Bump version: 7.3.0 → 7.3.1.dev0 2026-01-18 00:37:17,619 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-18 00:37:17,657 [ scc.config] DEBUG Found remote.origin.url 2026-01-18 00:37:18,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2026-01-18 00:37:18,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-18 00:37:18,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-18 00:37:19,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-18 00:37:19,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-18 00:37:19,766 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:37:19,804 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:37:19,805 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-01-18 00:37:19,805 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-18 00:37:19,807 [ scc.git] DEBUG Check current status 2026-01-18 00:37:19,807 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-18 00:37:19,809 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2026-01-18 00:37:19,809 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-18 00:37:19,847 [ scc.config] DEBUG Found remote.origin.url 2026-01-18 00:37:20,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2026-01-18 00:37:20,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-18 00:37:21,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-18 00:37:21,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-18 00:37:22,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-18 00:37:22,017 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:37:22,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:37:22,056 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-01-18 00:37:22,056 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-18 00:37:22,058 [ scc.git] DEBUG Check current status 2026-01-18 00:37:22,058 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-18 00:37:22,060 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2026-01-18 00:37:22,060 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-18 00:37:22,098 [ scc.config] DEBUG Found remote.origin.url 2026-01-18 00:37:22,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2026-01-18 00:37:23,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-18 00:37:23,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-18 00:37:23,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-18 00:37:24,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-18 00:37:24,305 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:37:24,342 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:37:24,342 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-01-18 00:37:24,342 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-18 00:37:24,344 [ scc.git] DEBUG Check current status 2026-01-18 00:37:24,344 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-18 00:37:24,347 [ scc.git] DEBUG 5e2de43 Merge pull request #510 from joshmoore/issue-509 2026-01-18 00:37:24,347 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-18 00:37:24,384 [ scc.config] DEBUG Found remote.origin.url 2026-01-18 00:37:24,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2026-01-18 00:37:25,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-18 00:37:25,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-18 00:37:26,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-18 00:37:26,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-18 00:37:26,524 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:37:26,562 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:37:26,563 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-01-18 00:37:26,563 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-18 00:37:26,565 [ scc.git] DEBUG Check current status 2026-01-18 00:37:26,565 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-18 00:37:26,567 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2026-01-18 00:37:26,568 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-18 00:37:26,605 [ scc.config] DEBUG Found remote.origin.url 2026-01-18 00:37:27,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2026-01-18 00:37:27,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-18 00:37:28,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-18 00:37:28,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-18 00:37:28,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-18 00:37:28,951 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:37:28,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:37:28,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-01-18 00:37:28,989 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-18 00:37:28,991 [ scc.git] DEBUG Check current status 2026-01-18 00:37:28,991 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-18 00:37:28,993 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-01-18 00:37:28,994 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-18 00:37:29,032 [ scc.config] DEBUG Found remote.origin.url 2026-01-18 00:37:29,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2026-01-18 00:37:30,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-18 00:37:30,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-18 00:37:30,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-18 00:37:31,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-18 00:37:31,306 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:37:31,343 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:37:31,343 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-01-18 00:37:31,344 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-18 00:37:31,345 [ scc.git] DEBUG Check current status 2026-01-18 00:37:31,346 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-18 00:37:31,348 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2026-01-18 00:37:31,348 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-18 00:37:31,385 [ scc.config] DEBUG Found remote.origin.url 2026-01-18 00:37:31,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2026-01-18 00:37:32,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-18 00:37:32,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-18 00:37:33,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-18 00:37:33,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-18 00:37:33,646 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:37:33,683 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:37:33,683 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-01-18 00:37:33,684 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-18 00:37:33,686 [ scc.git] DEBUG Check current status 2026-01-18 00:37:33,686 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-18 00:37:33,688 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2026-01-18 00:37:33,688 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-18 00:37:33,725 [ scc.config] DEBUG Found remote.origin.url 2026-01-18 00:37:34,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2026-01-18 00:37:34,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-18 00:37:35,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-18 00:37:35,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-18 00:37:35,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-18 00:37:35,921 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:37:35,958 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:37:35,958 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-01-18 00:37:35,958 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-18 00:37:35,960 [ scc.git] DEBUG Check current status 2026-01-18 00:37:35,960 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-18 00:37:35,963 [ scc.git] DEBUG bdfeb5e bump sphinx version 2026-01-18 00:37:35,963 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-18 00:37:36,000 [ scc.config] DEBUG Found remote.origin.url 2026-01-18 00:37:36,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2026-01-18 00:37:36,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-18 00:37:37,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-18 00:37:37,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-18 00:37:38,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-18 00:37:38,122 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:37:38,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:37:38,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-01-18 00:37:38,160 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-18 00:37:38,162 [ scc.git] DEBUG Check current status 2026-01-18 00:37:38,162 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-18 00:37:38,165 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2026-01-18 00:37:38,165 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-18 00:37:38,203 [ scc.config] DEBUG Found remote.origin.url 2026-01-18 00:37:38,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2026-01-18 00:37:39,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-18 00:37:39,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-18 00:37:39,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-18 00:37:40,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-18 00:37:40,358 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:37:40,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:37:40,396 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-01-18 00:37:40,396 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-18 00:37:40,398 [ scc.git] DEBUG Check current status 2026-01-18 00:37:40,398 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-18 00:37:40,400 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2026-01-18 00:37:40,400 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-18 00:37:40,437 [ scc.config] DEBUG Found remote.origin.url 2026-01-18 00:37:40,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-01-18 00:37:40,799 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-01-18 00:37:41,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2026-01-18 00:37:41,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-18 00:37:42,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-18 00:37:42,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-18 00:37:42,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-18 00:37:42,835 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:37:42,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:37:42,873 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-01-18 00:37:42,873 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-18 00:37:42,875 [ scc.git] DEBUG Check current status 2026-01-18 00:37:42,875 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-18 00:37:42,877 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2026-01-18 00:37:42,877 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-18 00:37:42,915 [ scc.config] DEBUG Found remote.origin.url 2026-01-18 00:37:43,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2026-01-18 00:37:43,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-18 00:37:44,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-18 00:37:44,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-18 00:37:44,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-18 00:37:44,989 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:37:45,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:37:45,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-01-18 00:37:45,028 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-18 00:37:45,029 [ scc.git] DEBUG Check current status 2026-01-18 00:37:45,030 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-18 00:37:45,032 [ scc.git] DEBUG 160d894 Fix display of code 2026-01-18 00:37:45,032 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-18 00:37:45,070 [ scc.config] DEBUG Found remote.origin.url 2026-01-18 00:37:45,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2026-01-18 00:37:45,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-18 00:37:46,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-18 00:37:46,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-18 00:37:47,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-18 00:37:47,222 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:37:47,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:37:47,260 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-01-18 00:37:47,260 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-18 00:37:47,262 [ scc.git] DEBUG Check current status 2026-01-18 00:37:47,262 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-18 00:37:47,264 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-01-18 00:37:47,264 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-18 00:37:47,302 [ scc.config] DEBUG Found remote.origin.url 2026-01-18 00:37:47,302 [ scc.git] DEBUG Repository configuration: base-branch: main 2026-01-18 00:37:47,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2026-01-18 00:37:48,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-18 00:37:48,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-18 00:37:49,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-18 00:37:49,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-18 00:37:49,492 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:37:49,530 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:37:49,530 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-01-18 00:37:49,530 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-18 00:37:49,532 [ scc.git] DEBUG Check current status 2026-01-18 00:37:49,532 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-18 00:37:49,534 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2026-01-18 00:37:49,535 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-18 00:37:49,572 [ scc.config] DEBUG Found remote.origin.url 2026-01-18 00:37:49,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-01-18 00:37:49,908 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-01-18 00:37:50,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2026-01-18 00:37:50,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-18 00:37:51,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-18 00:37:51,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-18 00:37:51,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-18 00:37:51,841 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:37:51,879 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:37:51,879 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-01-18 00:37:51,879 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-18 00:37:51,881 [ scc.git] DEBUG Check current status 2026-01-18 00:37:51,881 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-18 00:37:51,883 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2026-01-18 00:37:51,884 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-18 00:37:51,921 [ scc.config] DEBUG Found remote.origin.url 2026-01-18 00:37:52,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-01-18 00:37:52,248 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-01-18 00:37:52,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2026-01-18 00:37:52,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-18 00:37:53,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-18 00:37:53,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-18 00:37:54,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-18 00:37:54,238 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:37:54,275 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:37:54,275 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-01-18 00:37:54,275 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-18 00:37:54,277 [ scc.git] DEBUG Check current status 2026-01-18 00:37:54,277 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-18 00:37:54,280 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2026-01-18 00:37:54,280 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-18 00:37:54,318 [ scc.config] DEBUG Found remote.origin.url 2026-01-18 00:37:54,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2026-01-18 00:37:55,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-18 00:37:55,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-18 00:37:56,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-18 00:37:56,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-18 00:37:56,616 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:37:56,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:37:56,654 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-01-18 00:37:56,654 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-18 00:37:56,656 [ scc.git] DEBUG Check current status 2026-01-18 00:37:56,656 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-18 00:37:56,658 [ scc.git] DEBUG fb91f15 Merge pull request #231 from jburel/changelog2ghrelease 2026-01-18 00:37:56,659 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-18 00:37:56,697 [ scc.config] DEBUG Found remote.origin.url 2026-01-18 00:37:56,697 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-01-18 00:37:57,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-01-18 00:37:57,035 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-01-18 00:37:57,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2026-01-18 00:37:57,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-18 00:37:58,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-18 00:37:58,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-18 00:37:58,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-18 00:37:58,983 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:37:59,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:37:59,020 [ scc.git] DEBUG Resetting... 2026-01-18 00:37:59,020 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-01-18 00:37:59,027 [ scc.git] DEBUG HEAD is now at d9aa6de merge master -Dorg -Snone 2026-01-18 00:37:59,027 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-01-18 00:37:59,079 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2026-01-18 00:37:59,093 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2026-01-18 00:37:59,121 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-01-18 00:37:59,139 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-01-18 00:37:59,153 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2026-01-18 00:37:59,175 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2026-01-18 00:37:59,188 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2026-01-18 00:37:59,199 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2026-01-18 00:37:59,222 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-01-18 00:37:59,225 [ scc.git] DEBUG Check current status 2026-01-18 00:37:59,225 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-18 00:37:59,227 [ scc.git] DEBUG d9aa6de merge master -Dorg -Snone 2026-01-18 00:37:59,228 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-18 00:37:59,269 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-01-18 00:37:59,272 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-01-18 00:37:59,275 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-01-18 00:37:59,278 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-01-18 00:37:59,281 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2026-01-18 00:37:59,283 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-01-18 00:37:59,286 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-01-18 00:37:59,289 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2026-01-18 00:37:59,292 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-01-18 00:37:59,294 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-01-18 00:37:59,298 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-01-18 00:37:59,300 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-01-18 00:37:59,304 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-01-18 00:37:59,307 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-01-18 00:37:59,310 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-01-18 00:37:59,313 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-01-18 00:37:59,315 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-01-18 00:37:59,318 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-01-18 00:37:59,321 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-01-18 00:37:59,323 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-01-18 00:37:59,326 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-01-18 00:37:59,329 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2026-01-18 00:37:59,330 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-01-18 00:37:59,330 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-01-18 00:37:59,330 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-01-18 00:37:59,330 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-01-18 00:37:59,330 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-01-18 00:37:59,330 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-01-18 00:37:59,330 [ scc.repo] DEBUG ## PRs found: 2026-01-18 00:37:59,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-01-18 00:38:00,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-01-18 00:38:00,296 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:38:00,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2026-01-18 00:38:01,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:38:01,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2026-01-18 00:38:02,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:38:02,333 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-01-18 00:38:02,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-01-18 00:38:02,858 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:38:03,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2026-01-18 00:38:03,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:38:04,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2026-01-18 00:38:04,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:38:04,840 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-01-18 00:38:05,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-01-18 00:38:05,308 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:38:05,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2026-01-18 00:38:06,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:38:06,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2026-01-18 00:38:07,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:38:07,294 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-01-18 00:38:07,294 [ scc.repo] DEBUG ## Branches found: 2026-01-18 00:38:07,294 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:38:07,294 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:38:07,297 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-18 00:38:07,299 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-18 00:38:07,299 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-18 00:38:07,302 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-18 00:38:07,305 [ scc.git] DEBUG Already up to date. 2026-01-18 00:38:07,305 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-01-18 00:38:07,599 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-01-18 00:38:07,599 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-01-18 00:38:07,603 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-01-18 00:38:07,870 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-01-18 00:38:07,870 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-01-18 00:38:07,874 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-01-18 00:38:08,123 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-01-18 00:38:08,123 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-01-18 00:38:08,127 [ scc.git] DEBUG ## Unique users: [] 2026-01-18 00:38:08,127 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:38:08,127 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:38:08,129 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-01-18 00:38:08,131 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:38:08,133 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-01-18 00:38:08,136 [ scc.git] DEBUG Already up to date. 2026-01-18 00:38:08,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:38:08,274 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-01-18 00:38:08,277 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:38:08,279 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-01-18 00:38:08,281 [ scc.git] DEBUG Already up to date. 2026-01-18 00:38:08,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:38:08,708 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-01-18 00:38:08,711 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:38:08,713 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-01-18 00:38:08,715 [ scc.git] DEBUG Already up to date. 2026-01-18 00:38:09,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:38:09,092 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-18 00:38:09,141 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:38:09,141 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:38:09,143 [ scc.repo] DEBUG ## PRs found: 2026-01-18 00:38:09,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2026-01-18 00:38:09,514 [ scc.repo] DEBUG ## Branches found: 2026-01-18 00:38:09,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-01-18 00:38:09,514 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:38:09,514 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:38:09,517 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-18 00:38:09,519 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-18 00:38:09,519 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-18 00:38:09,521 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-18 00:38:09,524 [ scc.git] DEBUG Already up to date. 2026-01-18 00:38:09,524 [ scc.git] DEBUG ## Unique users: [] 2026-01-18 00:38:09,524 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:38:09,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:38:09,526 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-18 00:38:09,563 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:38:09,563 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:38:09,565 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:38:09,601 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-18 00:38:09,604 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9147fa7490> has no local changes 2026-01-18 00:38:09,604 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2026-01-18 00:38:09,609 [ scc.git] DEBUG [detached HEAD d5fbb2f] merge master -Dorg -Ssuccess-only 2026-01-18 00:38:09,610 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:38:09,610 [ scc.repo] DEBUG ## PRs found: 2026-01-18 00:38:10,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2026-01-18 00:38:10,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2026-01-18 00:38:10,736 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:38:11,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2026-01-18 00:38:11,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:38:12,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:38:12,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2026-01-18 00:38:13,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:38:13,287 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-18 00:38:13,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2026-01-18 00:38:14,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2026-01-18 00:38:14,275 [ scc.repo] DEBUG ## Branches found: 2026-01-18 00:38:14,276 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-01-18 00:38:14,276 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:38:14,276 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:38:14,278 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-18 00:38:14,280 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-18 00:38:14,281 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-18 00:38:14,283 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-18 00:38:14,286 [ scc.git] DEBUG Already up to date. 2026-01-18 00:38:14,286 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2026-01-18 00:38:14,557 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2026-01-18 00:38:14,557 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2026-01-18 00:38:14,560 [ scc.git] DEBUG ## Unique users: [] 2026-01-18 00:38:14,560 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:38:14,561 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:38:14,563 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-01-18 00:38:14,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:38:14,567 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-01-18 00:38:14,573 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:38:14,575 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-01-18 00:38:14,576 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-18 00:38:14,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:38:14,723 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-18 00:38:14,762 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:38:14,762 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:38:14,764 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:38:14,800 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-18 00:38:14,803 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9146fdc710> has no local changes 2026-01-18 00:38:14,803 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2026-01-18 00:38:14,809 [ scc.git] DEBUG [detached HEAD 3c0fe6b] merge master -Dorg -Ssuccess-only 2026-01-18 00:38:14,809 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:38:14,809 [ scc.repo] DEBUG ## PRs found: 2026-01-18 00:38:15,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2026-01-18 00:38:15,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2026-01-18 00:38:16,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2026-01-18 00:38:16,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None 2026-01-18 00:38:17,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:38:17,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:38:18,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None 2026-01-18 00:38:18,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:38:18,889 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2026-01-18 00:38:19,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2026-01-18 00:38:19,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2026-01-18 00:38:19,811 [ scc.repo] DEBUG ## Branches found: 2026-01-18 00:38:19,811 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-01-18 00:38:19,811 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:38:19,811 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:38:19,814 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-18 00:38:19,816 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-18 00:38:19,816 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-18 00:38:19,819 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-18 00:38:19,826 [ scc.git] DEBUG Updating ce6e13c..68b7303 2026-01-18 00:38:20,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2026-01-18 00:38:21,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2026-01-18 00:38:21,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2026-01-18 00:38:22,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2026-01-18 00:38:22,592 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2026-01-18 00:38:22,866 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2026-01-18 00:38:22,866 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2026-01-18 00:38:22,869 [ scc.git] DEBUG ## Unique users: [] 2026-01-18 00:38:22,869 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:38:22,869 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:38:22,872 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-01-18 00:38:22,875 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:38:22,877 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-01-18 00:38:22,884 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2026-01-18 00:38:22,885 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:38:22,888 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2026-01-18 00:38:22,888 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2026-01-18 00:38:23,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:38:23,040 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-18 00:38:23,077 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:38:23,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:38:23,079 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:38:23,118 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-18 00:38:23,121 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9147074cd0> has no local changes 2026-01-18 00:38:23,121 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2026-01-18 00:38:23,127 [ scc.git] DEBUG [detached HEAD ba36d19] merge master -Dorg -Ssuccess-only 2026-01-18 00:38:23,127 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:38:23,127 [ scc.repo] DEBUG ## PRs found: 2026-01-18 00:38:23,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2026-01-18 00:38:24,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/187 HTTP/1.1" 200 None 2026-01-18 00:38:24,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/187/comments HTTP/1.1" 200 None 2026-01-18 00:38:25,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c5b383c41a80f3584b709a4fa048d7d16d5ff16a HTTP/1.1" 200 None 2026-01-18 00:38:25,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c5b383c41a80f3584b709a4fa048d7d16d5ff16a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:38:26,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c5b383c41a80f3584b709a4fa048d7d16d5ff16a/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:38:26,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c5b383c41a80f3584b709a4fa048d7d16d5ff16a HTTP/1.1" 200 None 2026-01-18 00:38:27,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/c5b383c41a80f3584b709a4fa048d7d16d5ff16a?per_page=1 HTTP/1.1" 200 None 2026-01-18 00:38:27,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c5b383c41a80f3584b709a4fa048d7d16d5ff16a HTTP/1.1" 200 None 2026-01-18 00:38:27,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c5b383c41a80f3584b709a4fa048d7d16d5ff16a/status HTTP/1.1" 200 None 2026-01-18 00:38:27,930 [ scc.repo] DEBUG - PR 187 dominikl 'Fix target-by-name option' 2026-01-18 00:38:28,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/186 HTTP/1.1" 200 None 2026-01-18 00:38:28,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2 HTTP/1.1" 200 None 2026-01-18 00:38:29,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:38:29,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:38:30,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2 HTTP/1.1" 200 None 2026-01-18 00:38:30,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2?per_page=1 HTTP/1.1" 200 None 2026-01-18 00:38:31,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2 HTTP/1.1" 200 None 2026-01-18 00:38:31,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2/status HTTP/1.1" 200 None 2026-01-18 00:38:31,736 [ scc.repo] DEBUG - PR 186 jburel 'Create release from tag' 2026-01-18 00:38:32,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2026-01-18 00:38:32,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2026-01-18 00:38:33,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-01-18 00:38:33,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:38:34,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:38:34,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-01-18 00:38:35,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None 2026-01-18 00:38:35,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-01-18 00:38:36,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None 2026-01-18 00:38:36,116 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-01-18 00:38:36,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2026-01-18 00:38:37,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2026-01-18 00:38:37,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2026-01-18 00:38:38,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:38:38,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:38:39,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2026-01-18 00:38:39,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/b1ec9c408dd417886a980e3368c0d82bfefe491d?per_page=1 HTTP/1.1" 200 None 2026-01-18 00:38:39,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2026-01-18 00:38:40,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/status HTTP/1.1" 200 None 2026-01-18 00:38:40,374 [ scc.repo] DEBUG - PR 181 will-moore 'Add labels support for import' 2026-01-18 00:38:40,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2026-01-18 00:38:41,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2026-01-18 00:38:41,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2026-01-18 00:38:42,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:38:42,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:38:43,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2026-01-18 00:38:43,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bb180dbb97ddc67cd2cf655d56058ba7da765769?per_page=1 HTTP/1.1" 200 None 2026-01-18 00:38:44,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2026-01-18 00:38:44,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/status HTTP/1.1" 200 None 2026-01-18 00:38:44,859 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-01-18 00:38:45,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2026-01-18 00:38:45,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2026-01-18 00:38:46,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-01-18 00:38:46,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:38:47,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:38:47,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-01-18 00:38:48,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2026-01-18 00:38:48,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-01-18 00:38:49,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2026-01-18 00:38:49,118 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2026-01-18 00:38:49,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None 2026-01-18 00:38:50,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None 2026-01-18 00:38:50,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/34b94cfddfc81989bb9e3fcd54cfded2ae58cf9f HTTP/1.1" 200 None 2026-01-18 00:38:51,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/34b94cfddfc81989bb9e3fcd54cfded2ae58cf9f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:38:51,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/34b94cfddfc81989bb9e3fcd54cfded2ae58cf9f/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:38:51,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2026-01-18 00:38:52,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/169 HTTP/1.1" 200 None 2026-01-18 00:38:52,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2026-01-18 00:38:53,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2026-01-18 00:38:53,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2026-01-18 00:38:54,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2026-01-18 00:38:54,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2026-01-18 00:38:55,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2026-01-18 00:38:55,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2026-01-18 00:38:55,870 [ scc.repo] DEBUG ## Branches found: 2026-01-18 00:38:55,870 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-01-18 00:38:55,870 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:38:55,870 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:38:55,873 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-18 00:38:55,875 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-18 00:38:55,875 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-18 00:38:55,878 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-18 00:38:55,890 [ scc.git] DEBUG Updating 11d3587..37ea700 2026-01-18 00:38:56,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2026-01-18 00:38:57,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2026-01-18 00:38:57,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2026-01-18 00:38:58,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2026-01-18 00:38:59,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2026-01-18 00:39:00,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2026-01-18 00:39:00,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2026-01-18 00:39:01,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2026-01-18 00:39:01,461 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2026-01-18 00:39:01,733 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-01-18 00:39:01,733 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2026-01-18 00:39:01,737 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2026-01-18 00:39:01,989 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-01-18 00:39:01,989 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2026-01-18 00:39:01,992 [ scc.git] DEBUG Calling 'git fetch origin pull/181/head' 2026-01-18 00:39:02,264 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-01-18 00:39:02,264 [ scc.git] DEBUG * branch refs/pull/181/head -> FETCH_HEAD 2026-01-18 00:39:02,267 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2026-01-18 00:39:02,526 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-01-18 00:39:02,526 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2026-01-18 00:39:02,530 [ scc.git] DEBUG Calling 'git fetch origin pull/186/head' 2026-01-18 00:39:02,791 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-01-18 00:39:02,791 [ scc.git] DEBUG * branch refs/pull/186/head -> FETCH_HEAD 2026-01-18 00:39:02,795 [ scc.git] DEBUG Calling 'git fetch origin pull/187/head' 2026-01-18 00:39:03,049 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-01-18 00:39:03,049 [ scc.git] DEBUG * branch refs/pull/187/head -> FETCH_HEAD 2026-01-18 00:39:03,052 [ scc.git] DEBUG ## Unique users: [] 2026-01-18 00:39:03,053 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:39:03,053 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:39:03,055 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-01-18 00:39:03,058 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:39:03,060 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-01-18 00:39:03,069 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:39:03,072 [ scc.git] DEBUG README.rst | 14 ++ 2026-01-18 00:39:03,072 [ scc.git] DEBUG src/omero_zarr/cli.py | 66 +++++---- 2026-01-18 00:39:03,073 [ scc.git] DEBUG src/omero_zarr/kvp_tables.py | 82 +++++++++++ 2026-01-18 00:39:03,073 [ scc.git] DEBUG src/omero_zarr/masks.py | 46 ++++-- 2026-01-18 00:39:03,073 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 51 +++++-- 2026-01-18 00:39:03,073 [ scc.git] DEBUG src/omero_zarr/util.py | 49 ++++++- 2026-01-18 00:39:03,073 [ scc.git] DEBUG test/integration/clitest/test_export.py | 251 +++++++++++++++++++++++--------- 2026-01-18 00:39:03,073 [ scc.git] DEBUG 7 files changed, 443 insertions(+), 116 deletions(-) 2026-01-18 00:39:03,073 [ scc.git] DEBUG create mode 100644 src/omero_zarr/kvp_tables.py 2026-01-18 00:39:03,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:39:03,217 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bb180dbb97ddc67cd2cf655d56058ba7da765769' 2026-01-18 00:39:03,220 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:39:03,222 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) bb180dbb97ddc67cd2cf655d56058ba7da765769' 2026-01-18 00:39:03,231 [ scc.git] DEBUG Auto-merging CHANGELOG.md 2026-01-18 00:39:03,231 [ scc.git] DEBUG CONFLICT (content): Merge conflict in CHANGELOG.md 2026-01-18 00:39:03,231 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-01-18 00:39:03,231 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-01-18 00:39:03,232 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-01-18 00:39:03,232 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-01-18 00:39:03,232 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-01-18 00:39:03,232 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-01-18 00:39:03,234 [ scc.git] DEBUG Calling 'git reset --hard e76ed34fd84671731177637f05052a057c9c03ed' 2026-01-18 00:39:03,239 [ scc.git] DEBUG HEAD is now at e76ed34 merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) 2026-01-18 00:39:03,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:39:03,686 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b bb180dbb97ddc67cd2cf655d56058ba7da765769' 2026-01-18 00:39:03,689 [ scc.git] DEBUG Calling 'git diff --name-only f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2026-01-18 00:39:03,691 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#23](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/consoleText) for more details. Possible conflicts: - PR #174 will-moore 'Skip wells' - src/omero_zarr/masks.py - test/integration/clitest/test_export.py - Upstream changes - CHANGELOG.md --conflicts 2026-01-18 00:39:03,693 [ scc.config] DEBUG Found github.token 2026-01-18 00:39:03,693 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2026-01-18 00:39:03,693 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b1ec9c408dd417886a980e3368c0d82bfefe491d' 2026-01-18 00:39:03,696 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:39:03,699 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 181 (Add labels support for import) b1ec9c408dd417886a980e3368c0d82bfefe491d' 2026-01-18 00:39:03,707 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-01-18 00:39:03,708 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:39:03,712 [ scc.git] DEBUG src/omero_zarr/cli.py | 4 + 2026-01-18 00:39:03,712 [ scc.git] DEBUG src/omero_zarr/import_labels.py | 196 ++++++++++++++++++++++++++++++++ 2026-01-18 00:39:03,712 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 7 ++ 2026-01-18 00:39:03,712 [ scc.git] DEBUG test/integration/clitest/test_import.py | 19 ++++ 2026-01-18 00:39:03,712 [ scc.git] DEBUG 4 files changed, 226 insertions(+) 2026-01-18 00:39:03,712 [ scc.git] DEBUG create mode 100644 src/omero_zarr/import_labels.py 2026-01-18 00:39:04,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:39:04,068 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-01-18 00:39:04,071 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:39:04,074 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-01-18 00:39:04,083 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-01-18 00:39:04,083 [ scc.git] DEBUG Auto-merging src/omero_zarr/import_labels.py 2026-01-18 00:39:04,083 [ scc.git] DEBUG CONFLICT (add/add): Merge conflict in src/omero_zarr/import_labels.py 2026-01-18 00:39:04,083 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-01-18 00:39:04,083 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-01-18 00:39:04,083 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-01-18 00:39:04,086 [ scc.git] DEBUG Calling 'git reset --hard 99a04e21230fff1842686d01193f4ba3669e8d75' 2026-01-18 00:39:04,090 [ scc.git] DEBUG HEAD is now at 99a04e2 merge master -Dorg -Ssuccess-only: PR 181 (Add labels support for import) 2026-01-18 00:39:04,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:39:04,460 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-01-18 00:39:04,462 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2026-01-18 00:39:04,465 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#23](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/consoleText) for more details. Possible conflicts: - PR #181 will-moore 'Add labels support for import' - src/omero_zarr/import_labels.py --conflicts 2026-01-18 00:39:04,467 [ scc.config] DEBUG Found github.token 2026-01-18 00:39:04,467 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2026-01-18 00:39:04,467 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2' 2026-01-18 00:39:04,470 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:39:04,472 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 186 (Create release from tag) e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2' 2026-01-18 00:39:04,479 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:39:04,482 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 7 ++++++- 2026-01-18 00:39:04,482 [ scc.git] DEBUG CHANGELOG.md | 41 -------------------------------------- 2026-01-18 00:39:04,482 [ scc.git] DEBUG 2 files changed, 6 insertions(+), 42 deletions(-) 2026-01-18 00:39:04,482 [ scc.git] DEBUG delete mode 100644 CHANGELOG.md 2026-01-18 00:39:04,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:39:04,854 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c5b383c41a80f3584b709a4fa048d7d16d5ff16a' 2026-01-18 00:39:04,857 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:39:04,859 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 187 (Fix target-by-name option) c5b383c41a80f3584b709a4fa048d7d16d5ff16a' 2026-01-18 00:39:04,866 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-01-18 00:39:04,867 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:39:04,870 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 5 +++-- 2026-01-18 00:39:04,870 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 2 deletions(-) 2026-01-18 00:39:05,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:39:05,250 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-18 00:39:05,289 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:39:05,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:39:05,291 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:39:05,328 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-18 00:39:05,331 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9147075110> has no local changes 2026-01-18 00:39:05,331 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..37ea700 Previously merged: - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 174 will-moore 'Skip wells' - PR 181 will-moore 'Add labels support for import' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' Conflicting PRs (not included): - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2026-01-18 00:39:05,337 [ scc.git] DEBUG [detached HEAD e34a59a] merge master -Dorg -Ssuccess-only 2026-01-18 00:39:05,338 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:39:05,338 [ scc.repo] DEBUG ## PRs found: 2026-01-18 00:39:05,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2026-01-18 00:39:06,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/662 HTTP/1.1" 200 None 2026-01-18 00:39:06,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/661 HTTP/1.1" 200 None 2026-01-18 00:39:06,890 [ scc.repo] DEBUG # ... Include label: include 2026-01-18 00:39:07,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0b1fadc410600a85e5a6600540f2ce98a28ae208 HTTP/1.1" 200 None 2026-01-18 00:39:07,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0b1fadc410600a85e5a6600540f2ce98a28ae208/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:39:08,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0b1fadc410600a85e5a6600540f2ce98a28ae208/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:39:08,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0b1fadc410600a85e5a6600540f2ce98a28ae208 HTTP/1.1" 200 None 2026-01-18 00:39:09,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/0b1fadc410600a85e5a6600540f2ce98a28ae208?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:39:09,308 [ scc.repo] DEBUG - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-01-18 00:39:09,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/659 HTTP/1.1" 200 None 2026-01-18 00:39:10,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/659/comments HTTP/1.1" 200 None 2026-01-18 00:39:10,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/50025be98eaab5a5c454b282088ea8fcd64e2ee3 HTTP/1.1" 200 None 2026-01-18 00:39:11,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/50025be98eaab5a5c454b282088ea8fcd64e2ee3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:39:11,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/50025be98eaab5a5c454b282088ea8fcd64e2ee3/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:39:12,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/50025be98eaab5a5c454b282088ea8fcd64e2ee3 HTTP/1.1" 200 None 2026-01-18 00:39:12,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/50025be98eaab5a5c454b282088ea8fcd64e2ee3?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:39:12,613 [ scc.repo] DEBUG - PR 659 will-moore 'Fix ability of export script to be installed and run without reportlab' 2026-01-18 00:39:13,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/656 HTTP/1.1" 200 None 2026-01-18 00:39:13,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c7d0108c6df89255b8875924ed52e264a72e581d HTTP/1.1" 200 None 2026-01-18 00:39:14,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c7d0108c6df89255b8875924ed52e264a72e581d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:39:14,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c7d0108c6df89255b8875924ed52e264a72e581d/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:39:15,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c7d0108c6df89255b8875924ed52e264a72e581d HTTP/1.1" 200 None 2026-01-18 00:39:15,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/c7d0108c6df89255b8875924ed52e264a72e581d?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:39:15,446 [ scc.repo] DEBUG - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-01-18 00:39:15,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/654 HTTP/1.1" 200 None 2026-01-18 00:39:16,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/654/comments HTTP/1.1" 200 None 2026-01-18 00:39:16,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e1b877b4b9b8cbb506d839dcb304a0b10df25063 HTTP/1.1" 200 None 2026-01-18 00:39:17,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e1b877b4b9b8cbb506d839dcb304a0b10df25063/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:39:17,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e1b877b4b9b8cbb506d839dcb304a0b10df25063/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:39:18,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e1b877b4b9b8cbb506d839dcb304a0b10df25063 HTTP/1.1" 200 None 2026-01-18 00:39:18,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e1b877b4b9b8cbb506d839dcb304a0b10df25063?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:39:18,752 [ scc.repo] DEBUG - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-01-18 00:39:19,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None 2026-01-18 00:39:19,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652/comments HTTP/1.1" 200 None 2026-01-18 00:39:19,702 [ scc.repo] DEBUG # ... Include label: include 2026-01-18 00:39:20,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None 2026-01-18 00:39:20,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:39:21,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:39:21,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None 2026-01-18 00:39:21,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:39:21,979 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-01-18 00:39:22,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/648 HTTP/1.1" 200 None 2026-01-18 00:39:22,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/648/comments HTTP/1.1" 200 None 2026-01-18 00:39:22,980 [ scc.repo] DEBUG # ... Include label: include 2026-01-18 00:39:23,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8b7ac78406a43da2a838a8bc7deedd4d19566827 HTTP/1.1" 200 None 2026-01-18 00:39:24,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8b7ac78406a43da2a838a8bc7deedd4d19566827/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:39:24,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8b7ac78406a43da2a838a8bc7deedd4d19566827/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:39:25,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8b7ac78406a43da2a838a8bc7deedd4d19566827 HTTP/1.1" 200 None 2026-01-18 00:39:25,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/8b7ac78406a43da2a838a8bc7deedd4d19566827?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:39:25,457 [ scc.repo] DEBUG - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-01-18 00:39:25,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2026-01-18 00:39:26,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2026-01-18 00:39:26,457 [ scc.repo] DEBUG # ... Include label: include 2026-01-18 00:39:26,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/873513165e5978a398379bd9b81114325e84a946 HTTP/1.1" 200 None 2026-01-18 00:39:27,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/873513165e5978a398379bd9b81114325e84a946/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:39:27,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/873513165e5978a398379bd9b81114325e84a946/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:39:28,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/873513165e5978a398379bd9b81114325e84a946 HTTP/1.1" 200 None 2026-01-18 00:39:28,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/873513165e5978a398379bd9b81114325e84a946?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:39:28,708 [ scc.repo] DEBUG - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' 2026-01-18 00:39:29,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/619 HTTP/1.1" 200 None 2026-01-18 00:39:29,441 [ scc.repo] DEBUG ## Branches found: 2026-01-18 00:39:29,441 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-01-18 00:39:29,441 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:39:29,441 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:39:29,444 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-18 00:39:29,447 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-18 00:39:29,447 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-18 00:39:29,450 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-18 00:39:29,486 [ scc.git] DEBUG Updating 9cc36cde..ddcf816a 2026-01-18 00:39:30,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None 2026-01-18 00:39:30,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None 2026-01-18 00:39:31,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None 2026-01-18 00:39:32,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None 2026-01-18 00:39:33,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2026-01-18 00:39:33,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2026-01-18 00:39:34,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2026-01-18 00:39:35,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2026-01-18 00:39:35,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2026-01-18 00:39:36,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2026-01-18 00:39:37,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2026-01-18 00:39:38,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2026-01-18 00:39:38,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2026-01-18 00:39:39,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2026-01-18 00:39:40,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2026-01-18 00:39:41,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2026-01-18 00:39:41,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2026-01-18 00:39:42,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2026-01-18 00:39:43,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2026-01-18 00:39:44,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2026-01-18 00:39:44,118 [ scc.git] DEBUG Calling 'git fetch origin pull/641/head' 2026-01-18 00:39:44,401 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-01-18 00:39:44,401 [ scc.git] DEBUG * branch refs/pull/641/head -> FETCH_HEAD 2026-01-18 00:39:44,405 [ scc.git] DEBUG Calling 'git fetch origin pull/648/head' 2026-01-18 00:39:44,663 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-01-18 00:39:44,663 [ scc.git] DEBUG * branch refs/pull/648/head -> FETCH_HEAD 2026-01-18 00:39:44,667 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head' 2026-01-18 00:39:44,926 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-01-18 00:39:44,926 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD 2026-01-18 00:39:44,929 [ scc.git] DEBUG Calling 'git fetch origin pull/654/head' 2026-01-18 00:39:45,182 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-01-18 00:39:45,182 [ scc.git] DEBUG * branch refs/pull/654/head -> FETCH_HEAD 2026-01-18 00:39:45,186 [ scc.git] DEBUG Calling 'git fetch origin pull/656/head' 2026-01-18 00:39:45,439 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-01-18 00:39:45,439 [ scc.git] DEBUG * branch refs/pull/656/head -> FETCH_HEAD 2026-01-18 00:39:45,443 [ scc.git] DEBUG Calling 'git fetch origin pull/659/head' 2026-01-18 00:39:45,705 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-01-18 00:39:45,705 [ scc.git] DEBUG * branch refs/pull/659/head -> FETCH_HEAD 2026-01-18 00:39:45,709 [ scc.git] DEBUG Calling 'git fetch origin pull/661/head' 2026-01-18 00:39:45,966 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-01-18 00:39:45,966 [ scc.git] DEBUG * branch refs/pull/661/head -> FETCH_HEAD 2026-01-18 00:39:45,970 [ scc.git] DEBUG ## Unique users: [] 2026-01-18 00:39:45,970 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:39:45,970 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:39:45,972 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...873513165e5978a398379bd9b81114325e84a946' 2026-01-18 00:39:45,977 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:39:45,979 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 641 (OMERO ROIs improvements : filtering visible and adding all) 873513165e5978a398379bd9b81114325e84a946' 2026-01-18 00:39:45,993 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:39:45,997 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 111 ++++++++++++++++++++++++++++++----------- 2026-01-18 00:39:45,997 [ scc.git] DEBUG 1 file changed, 83 insertions(+), 28 deletions(-) 2026-01-18 00:39:46,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:39:46,145 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b7ac78406a43da2a838a8bc7deedd4d19566827' 2026-01-18 00:39:46,152 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:39:46,154 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 648 (Add well and field label for high-content screening data, fixes #540) 8b7ac78406a43da2a838a8bc7deedd4d19566827' 2026-01-18 00:39:46,179 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-01-18 00:39:46,179 [ scc.git] DEBUG Auto-merging omero_figure/views.py 2026-01-18 00:39:46,179 [ scc.git] DEBUG Auto-merging src/index.html 2026-01-18 00:39:46,179 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2026-01-18 00:39:46,179 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2026-01-18 00:39:46,179 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2026-01-18 00:39:46,180 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:39:46,187 [ scc.git] DEBUG omero_figure/omeroutils.py | 32 +++++++++++ 2026-01-18 00:39:46,187 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 63 ++++++++++++++++++++++ 2026-01-18 00:39:46,187 [ scc.git] DEBUG omero_figure/views.py | 22 +++++++- 2026-01-18 00:39:46,187 [ scc.git] DEBUG src/index.html | 20 +++++++ 2026-01-18 00:39:46,187 [ scc.git] DEBUG src/js/models/figure_model.js | 1 + 2026-01-18 00:39:46,187 [ scc.git] DEBUG src/js/models/panel_model.js | 9 ++-- 2026-01-18 00:39:46,187 [ scc.git] DEBUG src/js/views/panel_view.js | 11 +++- 2026-01-18 00:39:46,187 [ scc.git] DEBUG src/templates/labels_form_inner.template.html | 1 + 2026-01-18 00:39:46,187 [ scc.git] DEBUG 8 files changed, 150 insertions(+), 9 deletions(-) 2026-01-18 00:39:46,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:39:46,541 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-01-18 00:39:46,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:39:46,551 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-01-18 00:39:46,576 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-01-18 00:39:46,576 [ scc.git] DEBUG Auto-merging src/index.html 2026-01-18 00:39:46,576 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-01-18 00:39:46,576 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:39:46,582 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++- 2026-01-18 00:39:46,582 [ scc.git] DEBUG src/index.html | 11 ++ 2026-01-18 00:39:46,582 [ scc.git] DEBUG src/js/views/figure_view.js | 1 + 2026-01-18 00:39:46,582 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-) 2026-01-18 00:39:46,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:39:46,940 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e1b877b4b9b8cbb506d839dcb304a0b10df25063' 2026-01-18 00:39:46,948 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:39:46,950 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 654 (Refresh metadata button to reload channel names, pixel sizes) e1b877b4b9b8cbb506d839dcb304a0b10df25063' 2026-01-18 00:39:46,971 [ scc.git] DEBUG Auto-merging src/index.html 2026-01-18 00:39:46,971 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2026-01-18 00:39:46,971 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-01-18 00:39:46,972 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:39:46,976 [ scc.git] DEBUG src/index.html | 5 +++ 2026-01-18 00:39:46,976 [ scc.git] DEBUG src/js/models/figure_model.js | 71 +++++++++++++++++++++++++++++++++++++++++++ 2026-01-18 00:39:46,976 [ scc.git] DEBUG src/js/views/figure_view.js | 7 +++++ 2026-01-18 00:39:46,976 [ scc.git] DEBUG 3 files changed, 83 insertions(+) 2026-01-18 00:39:47,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:39:47,334 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c7d0108c6df89255b8875924ed52e264a72e581d' 2026-01-18 00:39:47,339 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:39:47,341 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 656 (Option to add roi comment when adding ROI from OMERO) c7d0108c6df89255b8875924ed52e264a72e581d' 2026-01-18 00:39:47,354 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2026-01-18 00:39:47,355 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:39:47,358 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 3 +- 2026-01-18 00:39:47,358 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 68 +++++++++++++++++------- 2026-01-18 00:39:47,358 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 7 ++- 2026-01-18 00:39:47,358 [ scc.git] DEBUG 3 files changed, 56 insertions(+), 22 deletions(-) 2026-01-18 00:39:47,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:39:47,721 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...50025be98eaab5a5c454b282088ea8fcd64e2ee3' 2026-01-18 00:39:47,725 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:39:47,727 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 659 (Fix ability of export script to be installed and run without reportlab) 50025be98eaab5a5c454b282088ea8fcd64e2ee3' 2026-01-18 00:39:47,741 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-01-18 00:39:47,742 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:39:47,746 [ scc.git] DEBUG omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py | 3 +-- 2026-01-18 00:39:47,746 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 2 deletions(-) 2026-01-18 00:39:48,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:39:48,131 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0b1fadc410600a85e5a6600540f2ce98a28ae208' 2026-01-18 00:39:48,136 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:39:48,138 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 661 (Align to grid - check if panels are already in the grid) 0b1fadc410600a85e5a6600540f2ce98a28ae208' 2026-01-18 00:39:48,151 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2026-01-18 00:39:48,151 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:39:48,155 [ scc.git] DEBUG src/js/models/figure_model.js | 7 ++++++- 2026-01-18 00:39:48,155 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 1 deletion(-) 2026-01-18 00:39:48,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:39:48,527 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-18 00:39:48,566 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:39:48,566 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:39:48,568 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:39:48,607 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-18 00:39:48,611 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f91470508d0> has no local changes 2026-01-18 00:39:48,611 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 662 will-moore 'Export script runnable OMERO' (stage: draft) - PR 619 will-moore 'OME-Zarr support' (stage: draft) Updating 9cc36cde..ddcf816a Previously merged: - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 659 will-moore 'Fix ability of export script to be installed and run without reportlab' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2026-01-18 00:39:48,618 [ scc.git] DEBUG [detached HEAD 8a086f56] merge master -Dorg -Ssuccess-only 2026-01-18 00:39:48,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:39:48,618 [ scc.repo] DEBUG ## PRs found: 2026-01-18 00:39:49,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2026-01-18 00:39:49,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2026-01-18 00:39:49,588 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:39:50,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2026-01-18 00:39:50,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:39:51,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:39:51,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2026-01-18 00:39:52,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:39:52,150 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-18 00:39:52,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2026-01-18 00:39:53,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2026-01-18 00:39:53,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2026-01-18 00:39:54,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:39:54,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2026-01-18 00:39:54,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:39:54,905 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2026-01-18 00:39:54,905 [ scc.repo] DEBUG ## Branches found: 2026-01-18 00:39:54,905 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-01-18 00:39:54,906 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:39:54,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:39:54,908 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-18 00:39:54,910 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-18 00:39:54,910 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-18 00:39:54,913 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-18 00:39:54,916 [ scc.git] DEBUG Already up to date. 2026-01-18 00:39:54,916 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2026-01-18 00:39:55,175 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-01-18 00:39:55,176 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2026-01-18 00:39:55,179 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2026-01-18 00:39:55,426 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-01-18 00:39:55,426 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2026-01-18 00:39:55,430 [ scc.git] DEBUG ## Unique users: [] 2026-01-18 00:39:55,430 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:39:55,430 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:39:55,432 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-01-18 00:39:55,435 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:39:55,437 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-01-18 00:39:55,443 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2026-01-18 00:39:55,444 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:39:55,447 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2026-01-18 00:39:55,447 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2026-01-18 00:39:55,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:39:55,596 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-01-18 00:39:55,598 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:39:55,600 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-01-18 00:39:55,608 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:39:55,610 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-01-18 00:39:55,610 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-18 00:39:55,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:39:55,992 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-18 00:39:56,030 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:39:56,030 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:39:56,032 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:39:56,069 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-18 00:39:56,072 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f914715c390> has no local changes 2026-01-18 00:39:56,072 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2026-01-18 00:39:56,078 [ scc.git] DEBUG [detached HEAD 6d517e8] merge master -Dorg -Ssuccess-only 2026-01-18 00:39:56,078 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:39:56,078 [ scc.repo] DEBUG ## PRs found: 2026-01-18 00:39:56,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2026-01-18 00:39:57,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2026-01-18 00:39:57,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2026-01-18 00:39:58,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2026-01-18 00:39:58,105 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:39:58,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2026-01-18 00:39:59,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:39:59,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:40:00,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2026-01-18 00:40:00,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:40:00,700 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-01-18 00:40:01,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2026-01-18 00:40:01,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2026-01-18 00:40:02,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2026-01-18 00:40:02,137 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:40:02,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2026-01-18 00:40:03,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:40:03,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:40:04,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2026-01-18 00:40:04,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:40:04,868 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-01-18 00:40:05,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2026-01-18 00:40:05,381 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:40:05,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2026-01-18 00:40:06,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:40:06,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:40:07,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2026-01-18 00:40:07,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:40:07,795 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-01-18 00:40:08,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2026-01-18 00:40:08,291 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:40:08,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2026-01-18 00:40:09,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:40:10,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:40:10,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2026-01-18 00:40:10,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:40:10,866 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-01-18 00:40:11,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2026-01-18 00:40:11,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2026-01-18 00:40:11,937 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:40:12,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2026-01-18 00:40:12,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:40:13,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:40:14,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2026-01-18 00:40:14,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:40:14,462 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-01-18 00:40:14,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2026-01-18 00:40:14,975 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:40:15,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2026-01-18 00:40:16,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:40:16,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:40:17,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2026-01-18 00:40:17,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:40:17,507 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-01-18 00:40:17,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2026-01-18 00:40:17,997 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:40:18,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2026-01-18 00:40:19,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:40:19,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:40:20,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2026-01-18 00:40:20,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:40:20,601 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-01-18 00:40:20,601 [ scc.repo] DEBUG ## Branches found: 2026-01-18 00:40:20,601 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-01-18 00:40:20,601 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:40:20,601 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:40:20,604 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-18 00:40:20,606 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-18 00:40:20,606 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-18 00:40:20,609 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-18 00:40:20,612 [ scc.git] DEBUG Already up to date. 2026-01-18 00:40:20,612 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2026-01-18 00:40:20,880 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-01-18 00:40:20,880 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2026-01-18 00:40:20,884 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2026-01-18 00:40:21,139 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-01-18 00:40:21,139 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2026-01-18 00:40:21,143 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2026-01-18 00:40:21,399 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-01-18 00:40:21,399 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2026-01-18 00:40:21,403 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2026-01-18 00:40:21,658 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-01-18 00:40:21,658 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2026-01-18 00:40:21,662 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2026-01-18 00:40:21,915 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-01-18 00:40:21,915 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2026-01-18 00:40:21,918 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2026-01-18 00:40:22,173 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-01-18 00:40:22,173 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2026-01-18 00:40:22,177 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2026-01-18 00:40:22,430 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-01-18 00:40:22,430 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2026-01-18 00:40:22,434 [ scc.git] DEBUG ## Unique users: [] 2026-01-18 00:40:22,434 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:40:22,434 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:40:22,436 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-01-18 00:40:22,439 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:40:22,441 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-01-18 00:40:22,449 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:40:22,453 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-01-18 00:40:22,453 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-01-18 00:40:22,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:40:22,597 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-01-18 00:40:22,600 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:40:22,602 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-01-18 00:40:22,616 [ scc.git] DEBUG Auto-merging package-lock.json 2026-01-18 00:40:22,617 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:40:22,621 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2026-01-18 00:40:22,621 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2026-01-18 00:40:23,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:40:23,007 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-01-18 00:40:23,010 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:40:23,012 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-01-18 00:40:23,027 [ scc.git] DEBUG Auto-merging package-lock.json 2026-01-18 00:40:23,027 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-01-18 00:40:23,027 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-01-18 00:40:23,027 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-01-18 00:40:23,030 [ scc.git] DEBUG Calling 'git reset --hard ad86d27e22062d751ef2c598abd5949e90cbf0d9' 2026-01-18 00:40:23,035 [ scc.git] DEBUG HEAD is now at ad86d27 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2026-01-18 00:40:23,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:40:23,400 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-01-18 00:40:23,403 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-01-18 00:40:23,405 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#23](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2026-01-18 00:40:23,407 [ scc.config] DEBUG Found github.token 2026-01-18 00:40:23,407 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2026-01-18 00:40:23,407 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-01-18 00:40:23,410 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:40:23,412 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-01-18 00:40:23,427 [ scc.git] DEBUG Auto-merging package-lock.json 2026-01-18 00:40:23,428 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:40:23,432 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2026-01-18 00:40:23,432 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2026-01-18 00:40:23,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:40:23,791 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-01-18 00:40:23,794 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:40:23,796 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-01-18 00:40:23,811 [ scc.git] DEBUG Auto-merging package-lock.json 2026-01-18 00:40:23,812 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:40:23,816 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-01-18 00:40:23,816 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-01-18 00:40:24,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:40:24,187 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-01-18 00:40:24,190 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:40:24,192 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-01-18 00:40:24,206 [ scc.git] DEBUG Auto-merging package-lock.json 2026-01-18 00:40:24,206 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-01-18 00:40:24,206 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-01-18 00:40:24,207 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-01-18 00:40:24,209 [ scc.git] DEBUG Calling 'git reset --hard d3829b92722874b75d4cd2d7ec0244b2c7229846' 2026-01-18 00:40:24,214 [ scc.git] DEBUG HEAD is now at d3829b9 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-01-18 00:40:24,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:40:24,587 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-01-18 00:40:24,590 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-01-18 00:40:24,592 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#23](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2026-01-18 00:40:24,594 [ scc.config] DEBUG Found github.token 2026-01-18 00:40:24,594 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2026-01-18 00:40:24,594 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-01-18 00:40:24,597 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:40:24,599 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-01-18 00:40:24,617 [ scc.git] DEBUG Auto-merging package-lock.json 2026-01-18 00:40:24,617 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-01-18 00:40:24,617 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-01-18 00:40:24,618 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-01-18 00:40:24,620 [ scc.git] DEBUG Calling 'git reset --hard d3829b92722874b75d4cd2d7ec0244b2c7229846' 2026-01-18 00:40:24,624 [ scc.git] DEBUG HEAD is now at d3829b9 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-01-18 00:40:24,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:40:24,989 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-01-18 00:40:24,992 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-01-18 00:40:24,994 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#23](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2026-01-18 00:40:24,996 [ scc.config] DEBUG Found github.token 2026-01-18 00:40:24,996 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2026-01-18 00:40:24,996 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-18 00:40:25,035 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:40:25,035 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:40:25,037 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:40:25,075 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-18 00:40:25,079 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9147072610> has no local changes 2026-01-18 00:40:25,079 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2026-01-18 00:40:25,085 [ scc.git] DEBUG [detached HEAD 782f25f] merge master -Dorg -Ssuccess-only 2026-01-18 00:40:25,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:40:25,086 [ scc.repo] DEBUG ## PRs found: 2026-01-18 00:40:25,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2026-01-18 00:40:26,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/513 HTTP/1.1" 200 None 2026-01-18 00:40:26,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None 2026-01-18 00:40:27,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:40:27,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:40:28,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None 2026-01-18 00:40:28,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/aebb6273b9267a47a47363208fa97dc9c638a688?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:40:28,602 [ scc.repo] DEBUG - PR 513 jburel 'Bump Python version' 2026-01-18 00:40:29,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/512 HTTP/1.1" 200 None 2026-01-18 00:40:29,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None 2026-01-18 00:40:30,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:40:30,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:40:30,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None 2026-01-18 00:40:31,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/ec8f9e716c574a715529da53dff61ef178020c43?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:40:31,403 [ scc.repo] DEBUG - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-01-18 00:40:31,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511 HTTP/1.1" 200 None 2026-01-18 00:40:32,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None 2026-01-18 00:40:32,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2026-01-18 00:40:33,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2026-01-18 00:40:33,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None 2026-01-18 00:40:34,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None 2026-01-18 00:40:34,282 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:40:34,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2026-01-18 00:40:35,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:40:35,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:40:36,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2026-01-18 00:40:36,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:40:36,712 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2026-01-18 00:40:37,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2026-01-18 00:40:37,182 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:40:37,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2026-01-18 00:40:38,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:40:38,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:40:39,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2026-01-18 00:40:39,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:40:39,862 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2026-01-18 00:40:40,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2026-01-18 00:40:40,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2026-01-18 00:40:41,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2026-01-18 00:40:41,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2026-01-18 00:40:42,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2026-01-18 00:40:42,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:40:43,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2026-01-18 00:40:43,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:40:43,649 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2026-01-18 00:40:44,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2026-01-18 00:40:44,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2026-01-18 00:40:45,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2026-01-18 00:40:45,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:40:46,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2026-01-18 00:40:46,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:40:46,514 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2026-01-18 00:40:46,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2026-01-18 00:40:47,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2026-01-18 00:40:47,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2026-01-18 00:40:48,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:40:49,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2026-01-18 00:40:49,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:40:49,478 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2026-01-18 00:40:49,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2026-01-18 00:40:50,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2026-01-18 00:40:50,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None 2026-01-18 00:40:51,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:40:52,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:40:52,231 [ scc.repo] DEBUG ## Branches found: 2026-01-18 00:40:52,231 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-01-18 00:40:52,231 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:40:52,231 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:40:52,234 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-18 00:40:52,236 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-18 00:40:52,236 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-18 00:40:52,239 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-18 00:40:52,245 [ scc.git] DEBUG Updating 7a798ce..5e2de43 2026-01-18 00:40:52,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2026-01-18 00:40:53,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2026-01-18 00:40:53,754 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2026-01-18 00:40:54,034 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-01-18 00:40:54,034 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2026-01-18 00:40:54,038 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2026-01-18 00:40:54,294 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-01-18 00:40:54,294 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2026-01-18 00:40:54,298 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2026-01-18 00:40:54,552 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-01-18 00:40:54,552 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2026-01-18 00:40:54,556 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2026-01-18 00:40:54,809 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-01-18 00:40:54,809 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2026-01-18 00:40:54,813 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head' 2026-01-18 00:40:55,075 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-01-18 00:40:55,075 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD 2026-01-18 00:40:55,079 [ scc.git] DEBUG Calling 'git fetch origin pull/512/head' 2026-01-18 00:40:55,333 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-01-18 00:40:55,333 [ scc.git] DEBUG * branch refs/pull/512/head -> FETCH_HEAD 2026-01-18 00:40:55,337 [ scc.git] DEBUG Calling 'git fetch origin pull/513/head' 2026-01-18 00:40:55,591 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-01-18 00:40:55,591 [ scc.git] DEBUG * branch refs/pull/513/head -> FETCH_HEAD 2026-01-18 00:40:55,595 [ scc.git] DEBUG ## Unique users: [] 2026-01-18 00:40:55,595 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:40:55,595 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:40:55,597 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-01-18 00:40:55,601 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:40:55,603 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-01-18 00:40:55,613 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2026-01-18 00:40:55,613 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2026-01-18 00:40:55,614 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:40:55,617 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2026-01-18 00:40:55,617 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2026-01-18 00:40:55,618 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2026-01-18 00:40:55,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:40:55,778 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2026-01-18 00:40:55,782 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:40:55,784 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2026-01-18 00:40:55,799 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2026-01-18 00:40:55,799 [ scc.git] DEBUG Auto-merging src/app/context.js 2026-01-18 00:40:55,799 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2026-01-18 00:40:55,799 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2026-01-18 00:40:55,800 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:40:55,804 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2026-01-18 00:40:55,804 [ scc.git] DEBUG src/app/context.js | 6 +- 2026-01-18 00:40:55,804 [ scc.git] DEBUG src/app/header.html | 5 + 2026-01-18 00:40:55,804 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2026-01-18 00:40:55,804 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2026-01-18 00:40:55,804 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2026-01-18 00:40:55,804 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2026-01-18 00:40:55,804 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2026-01-18 00:40:56,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:40:56,171 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2026-01-18 00:40:56,175 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:40:56,177 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2026-01-18 00:40:56,187 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2026-01-18 00:40:56,188 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:40:56,191 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2026-01-18 00:40:56,191 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2026-01-18 00:40:56,191 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2026-01-18 00:40:56,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:40:56,567 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2026-01-18 00:40:56,571 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:40:56,573 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2026-01-18 00:40:56,590 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:40:56,598 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2026-01-18 00:40:56,598 [ scc.git] DEBUG package.json | 2 +- 2026-01-18 00:40:56,598 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2026-01-18 00:40:56,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:40:56,967 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4' 2026-01-18 00:40:56,971 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:40:56,973 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4' 2026-01-18 00:40:57,009 [ scc.git] DEBUG Auto-merging package-lock.json 2026-01-18 00:40:57,009 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-01-18 00:40:57,009 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-01-18 00:40:57,010 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-01-18 00:40:57,013 [ scc.git] DEBUG Calling 'git reset --hard 0b9be7cf5af26f9a097996f869069f411f09d63c' 2026-01-18 00:40:57,023 [ scc.git] DEBUG HEAD is now at 0b9be7c merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) 2026-01-18 00:40:57,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:40:57,355 [ scc.git] DEBUG Calling 'git merge-base 5e2de43ad401fb00690a79644056e0ac15fabfd5 45d08b7e29871ecff0386975c975dacd0865bcc4' 2026-01-18 00:40:57,358 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..5e2de43ad401fb00690a79644056e0ac15fabfd5' 2026-01-18 00:40:57,361 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Conflicting PR. Removed from build [OMERO-plugins-push#23](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/consoleText) for more details. Possible conflicts: - PR #499 dependabot[bot] 'Bump nanoid and mocha' - package-lock.json --conflicts 2026-01-18 00:40:57,363 [ scc.config] DEBUG Found github.token 2026-01-18 00:40:57,363 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts. 2026-01-18 00:40:57,363 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ec8f9e716c574a715529da53dff61ef178020c43' 2026-01-18 00:40:57,367 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:40:57,369 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 512 (Replace manual changelog by automated GH release step) ec8f9e716c574a715529da53dff61ef178020c43' 2026-01-18 00:40:57,383 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:40:57,386 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 5 + 2026-01-18 00:40:57,386 [ scc.git] DEBUG CHANGELOG.md | 261 ------------------------------------- 2026-01-18 00:40:57,386 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 261 deletions(-) 2026-01-18 00:40:57,386 [ scc.git] DEBUG delete mode 100644 CHANGELOG.md 2026-01-18 00:40:57,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:40:57,746 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aebb6273b9267a47a47363208fa97dc9c638a688' 2026-01-18 00:40:57,751 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:40:57,753 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 513 (Bump Python version) aebb6273b9267a47a47363208fa97dc9c638a688' 2026-01-18 00:40:57,766 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-01-18 00:40:57,767 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:40:57,770 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 4 ++-- 2026-01-18 00:40:57,770 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2026-01-18 00:40:58,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:40:58,142 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-18 00:40:58,181 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:40:58,181 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:40:58,183 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:40:58,220 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-18 00:40:58,227 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f914715c0d0> has no local changes 2026-01-18 00:40:58,227 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..5e2de43 Previously merged: - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 513 jburel 'Bump Python version' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2026-01-18 00:40:58,233 [ scc.git] DEBUG [detached HEAD 55bb3a2] merge master -Dorg -Ssuccess-only 2026-01-18 00:40:58,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:40:58,233 [ scc.repo] DEBUG ## PRs found: 2026-01-18 00:40:58,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2026-01-18 00:40:59,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2026-01-18 00:40:59,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2026-01-18 00:40:59,613 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:41:00,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2026-01-18 00:41:00,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:41:01,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:41:01,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2026-01-18 00:41:02,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:41:02,359 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-18 00:41:02,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2026-01-18 00:41:03,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2026-01-18 00:41:03,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:41:04,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2026-01-18 00:41:04,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:41:04,642 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-01-18 00:41:05,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2026-01-18 00:41:05,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2026-01-18 00:41:06,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2026-01-18 00:41:06,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:41:07,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2026-01-18 00:41:07,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:41:07,490 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2026-01-18 00:41:07,490 [ scc.repo] DEBUG ## Branches found: 2026-01-18 00:41:07,490 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-01-18 00:41:07,490 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:41:07,490 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:07,493 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-18 00:41:07,495 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-18 00:41:07,495 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-18 00:41:07,498 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-18 00:41:07,500 [ scc.git] DEBUG Already up to date. 2026-01-18 00:41:07,500 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-01-18 00:41:07,766 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-01-18 00:41:07,766 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-01-18 00:41:07,770 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2026-01-18 00:41:08,023 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-01-18 00:41:08,023 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2026-01-18 00:41:08,027 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2026-01-18 00:41:08,278 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-01-18 00:41:08,278 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2026-01-18 00:41:08,282 [ scc.git] DEBUG ## Unique users: [] 2026-01-18 00:41:08,282 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:41:08,282 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:08,284 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-01-18 00:41:08,287 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:08,290 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-01-18 00:41:08,297 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:41:08,300 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2026-01-18 00:41:08,300 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2026-01-18 00:41:08,300 [ scc.git] DEBUG requirements.txt | 2 +- 2026-01-18 00:41:08,300 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2026-01-18 00:41:08,300 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2026-01-18 00:41:08,300 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2026-01-18 00:41:08,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:41:08,439 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-01-18 00:41:08,442 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:08,444 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-01-18 00:41:08,451 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:41:08,453 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-01-18 00:41:08,453 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-18 00:41:08,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:41:08,834 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-01-18 00:41:08,837 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:08,839 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-01-18 00:41:08,846 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-01-18 00:41:08,846 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-01-18 00:41:08,847 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-01-18 00:41:08,847 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-01-18 00:41:08,849 [ scc.git] DEBUG Calling 'git reset --hard fbd10f75741f088688df408219b614be99a495b1' 2026-01-18 00:41:08,853 [ scc.git] DEBUG HEAD is now at fbd10f7 merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2026-01-18 00:41:09,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:41:09,221 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-01-18 00:41:09,223 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2026-01-18 00:41:09,226 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#23](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2026-01-18 00:41:09,228 [ scc.config] DEBUG Found github.token 2026-01-18 00:41:09,228 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2026-01-18 00:41:09,228 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-18 00:41:09,266 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:41:09,266 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:09,268 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:41:09,306 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-18 00:41:09,309 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f914707dd50> has no local changes 2026-01-18 00:41:09,310 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2026-01-18 00:41:09,315 [ scc.git] DEBUG [detached HEAD 3bf1929] merge master -Dorg -Ssuccess-only 2026-01-18 00:41:09,316 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:41:09,316 [ scc.repo] DEBUG ## PRs found: 2026-01-18 00:41:09,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2026-01-18 00:41:10,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None 2026-01-18 00:41:10,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None 2026-01-18 00:41:11,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f HTTP/1.1" 200 None 2026-01-18 00:41:11,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:41:12,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f HTTP/1.1" 200 None 2026-01-18 00:41:12,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:41:12,604 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-01-18 00:41:13,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2026-01-18 00:41:13,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2026-01-18 00:41:14,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2026-01-18 00:41:14,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:41:15,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2026-01-18 00:41:15,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:41:15,485 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-01-18 00:41:15,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2026-01-18 00:41:16,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2026-01-18 00:41:16,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2026-01-18 00:41:17,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:41:17,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2026-01-18 00:41:18,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:41:18,306 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-01-18 00:41:18,306 [ scc.repo] DEBUG ## Branches found: 2026-01-18 00:41:18,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-01-18 00:41:18,306 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:41:18,306 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:18,308 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-18 00:41:18,311 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-18 00:41:18,311 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-18 00:41:18,313 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-18 00:41:18,319 [ scc.git] DEBUG Updating 3cd120c..55060a2 2026-01-18 00:41:19,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2026-01-18 00:41:19,077 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2026-01-18 00:41:19,350 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-01-18 00:41:19,350 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2026-01-18 00:41:19,353 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2026-01-18 00:41:19,616 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-01-18 00:41:19,616 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2026-01-18 00:41:19,620 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head' 2026-01-18 00:41:19,879 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-01-18 00:41:19,879 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD 2026-01-18 00:41:19,883 [ scc.git] DEBUG ## Unique users: [] 2026-01-18 00:41:19,883 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:41:19,883 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:19,885 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-01-18 00:41:19,889 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:19,891 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-01-18 00:41:19,903 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2026-01-18 00:41:19,903 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2026-01-18 00:41:19,903 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-01-18 00:41:19,903 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-01-18 00:41:19,903 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-01-18 00:41:19,903 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-01-18 00:41:19,906 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-01-18 00:41:19,910 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-01-18 00:41:20,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:41:20,061 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-01-18 00:41:20,065 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2026-01-18 00:41:20,068 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#23](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2026-01-18 00:41:20,071 [ scc.config] DEBUG Found github.token 2026-01-18 00:41:20,071 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2026-01-18 00:41:20,071 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2026-01-18 00:41:20,075 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:20,077 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2026-01-18 00:41:20,089 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-01-18 00:41:20,089 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-01-18 00:41:20,089 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2026-01-18 00:41:20,089 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-01-18 00:41:20,090 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-01-18 00:41:20,092 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-01-18 00:41:20,097 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-01-18 00:41:20,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:41:20,458 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2026-01-18 00:41:20,462 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2026-01-18 00:41:20,464 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#23](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2026-01-18 00:41:20,466 [ scc.config] DEBUG Found github.token 2026-01-18 00:41:20,466 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2026-01-18 00:41:20,466 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-01-18 00:41:20,469 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:20,471 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-01-18 00:41:20,480 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:41:20,483 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++- 2026-01-18 00:41:20,483 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-) 2026-01-18 00:41:20,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:41:20,863 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-18 00:41:20,901 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:41:20,901 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:20,903 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:41:20,940 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-18 00:41:20,944 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9144694790> has no local changes 2026-01-18 00:41:20,944 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2026-01-18 00:41:20,950 [ scc.git] DEBUG [detached HEAD ac35d3e] merge master -Dorg -Ssuccess-only 2026-01-18 00:41:20,951 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:41:20,951 [ scc.repo] DEBUG ## PRs found: 2026-01-18 00:41:21,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2026-01-18 00:41:21,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2026-01-18 00:41:22,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2026-01-18 00:41:22,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:41:23,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:41:23,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2026-01-18 00:41:24,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:41:24,374 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-01-18 00:41:24,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2026-01-18 00:41:24,853 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:41:25,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2026-01-18 00:41:25,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:41:26,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:41:27,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2026-01-18 00:41:27,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:41:27,496 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-01-18 00:41:27,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2026-01-18 00:41:27,979 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:41:28,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2026-01-18 00:41:29,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:41:29,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:41:30,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2026-01-18 00:41:30,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:41:30,496 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-01-18 00:41:30,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2026-01-18 00:41:31,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2026-01-18 00:41:31,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2026-01-18 00:41:32,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2026-01-18 00:41:32,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2026-01-18 00:41:33,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2026-01-18 00:41:33,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2026-01-18 00:41:33,895 [ scc.repo] DEBUG ## Branches found: 2026-01-18 00:41:33,895 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-01-18 00:41:33,895 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:41:33,895 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:33,897 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-18 00:41:33,899 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-18 00:41:33,899 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-18 00:41:33,902 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-18 00:41:33,905 [ scc.git] DEBUG Already up to date. 2026-01-18 00:41:33,905 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2026-01-18 00:41:34,175 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-01-18 00:41:34,175 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2026-01-18 00:41:34,179 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2026-01-18 00:41:34,434 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-01-18 00:41:34,434 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2026-01-18 00:41:34,438 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2026-01-18 00:41:34,688 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-01-18 00:41:34,688 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2026-01-18 00:41:34,692 [ scc.git] DEBUG ## Unique users: [] 2026-01-18 00:41:34,692 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:41:34,692 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:34,694 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2026-01-18 00:41:34,697 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:34,699 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2026-01-18 00:41:34,706 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:41:34,709 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2026-01-18 00:41:34,709 [ scc.git] DEBUG package.json | 2 +- 2026-01-18 00:41:34,709 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2026-01-18 00:41:34,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:41:34,847 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2026-01-18 00:41:34,850 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:34,852 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2026-01-18 00:41:34,861 [ scc.git] DEBUG Auto-merging package-lock.json 2026-01-18 00:41:34,861 [ scc.git] DEBUG Auto-merging package.json 2026-01-18 00:41:34,862 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:41:34,865 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2026-01-18 00:41:34,865 [ scc.git] DEBUG package.json | 2 +- 2026-01-18 00:41:34,865 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-01-18 00:41:35,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:41:35,233 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-01-18 00:41:35,236 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:35,238 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-01-18 00:41:35,246 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:41:35,248 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-01-18 00:41:35,248 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-18 00:41:35,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:41:35,618 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-18 00:41:35,657 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:41:35,657 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:35,659 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:41:35,697 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-18 00:41:35,701 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f914707d810> has no local changes 2026-01-18 00:41:35,701 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2026-01-18 00:41:35,707 [ scc.git] DEBUG [detached HEAD 7c2a89f] merge master -Dorg -Ssuccess-only 2026-01-18 00:41:35,707 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:41:35,707 [ scc.repo] DEBUG ## PRs found: 2026-01-18 00:41:36,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2026-01-18 00:41:36,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2026-01-18 00:41:36,634 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:41:37,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2026-01-18 00:41:37,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:41:38,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:41:38,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2026-01-18 00:41:39,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:41:39,170 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-18 00:41:39,170 [ scc.repo] DEBUG ## Branches found: 2026-01-18 00:41:39,170 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-01-18 00:41:39,170 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:41:39,170 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:39,172 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-18 00:41:39,174 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-18 00:41:39,175 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-18 00:41:39,177 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-18 00:41:39,180 [ scc.git] DEBUG Already up to date. 2026-01-18 00:41:39,180 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2026-01-18 00:41:39,448 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2026-01-18 00:41:39,448 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2026-01-18 00:41:39,452 [ scc.git] DEBUG ## Unique users: [] 2026-01-18 00:41:39,452 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:41:39,452 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:39,454 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2026-01-18 00:41:39,456 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:39,458 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2026-01-18 00:41:39,465 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:41:39,468 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-01-18 00:41:39,468 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-18 00:41:39,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:41:39,622 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-18 00:41:39,660 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:41:39,660 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:39,662 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:41:39,699 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-18 00:41:39,702 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9147092cd0> has no local changes 2026-01-18 00:41:39,702 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2026-01-18 00:41:39,708 [ scc.git] DEBUG [detached HEAD bed104a] merge master -Dorg -Ssuccess-only 2026-01-18 00:41:39,708 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:41:39,708 [ scc.repo] DEBUG ## PRs found: 2026-01-18 00:41:40,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2026-01-18 00:41:40,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None 2026-01-18 00:41:40,671 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:41:41,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-01-18 00:41:41,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:41:42,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:41:42,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-01-18 00:41:43,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None 2026-01-18 00:41:44,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-01-18 00:41:44,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None 2026-01-18 00:41:44,461 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-18 00:41:44,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None 2026-01-18 00:41:45,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None 2026-01-18 00:41:45,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2026-01-18 00:41:46,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:41:46,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:41:47,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2026-01-18 00:41:47,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None 2026-01-18 00:41:48,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2026-01-18 00:41:48,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None 2026-01-18 00:41:48,701 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions' 2026-01-18 00:41:49,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2026-01-18 00:41:49,221 [ scc.repo] DEBUG ## Branches found: 2026-01-18 00:41:49,221 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-01-18 00:41:49,221 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:41:49,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:49,224 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-18 00:41:49,226 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-18 00:41:49,226 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-18 00:41:49,229 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-18 00:41:49,231 [ scc.git] DEBUG Already up to date. 2026-01-18 00:41:49,231 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head' 2026-01-18 00:41:49,503 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2026-01-18 00:41:49,503 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD 2026-01-18 00:41:49,507 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head' 2026-01-18 00:41:49,759 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2026-01-18 00:41:49,759 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD 2026-01-18 00:41:49,763 [ scc.git] DEBUG ## Unique users: [] 2026-01-18 00:41:49,763 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:41:49,763 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:49,765 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3' 2026-01-18 00:41:49,767 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:49,769 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3' 2026-01-18 00:41:49,776 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:41:49,779 [ scc.git] DEBUG setup.py | 4 +- 2026-01-18 00:41:49,779 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 + 2026-01-18 00:41:49,779 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++-- 2026-01-18 00:41:49,779 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-) 2026-01-18 00:41:49,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:41:49,926 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301' 2026-01-18 00:41:49,928 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:49,930 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301' 2026-01-18 00:41:49,937 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:41:49,940 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-01-18 00:41:49,940 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-18 00:41:50,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:41:50,313 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-18 00:41:50,351 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:41:50,351 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:50,354 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:41:50,393 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-18 00:41:50,396 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f91446dbad0> has no local changes 2026-01-18 00:41:50,396 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2026-01-18 00:41:50,401 [ scc.git] DEBUG [detached HEAD eed4b80] merge master -Dorg -Ssuccess-only 2026-01-18 00:41:50,402 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:41:50,402 [ scc.repo] DEBUG ## PRs found: 2026-01-18 00:41:50,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2026-01-18 00:41:51,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2026-01-18 00:41:51,299 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:41:51,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2026-01-18 00:41:52,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:41:52,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:41:53,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2026-01-18 00:41:53,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:41:53,907 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-18 00:41:54,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2026-01-18 00:41:54,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2026-01-18 00:41:55,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2026-01-18 00:41:55,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:41:56,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2026-01-18 00:41:56,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:41:56,808 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2026-01-18 00:41:56,808 [ scc.repo] DEBUG ## Branches found: 2026-01-18 00:41:56,808 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-01-18 00:41:56,808 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:41:56,808 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:56,811 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-18 00:41:56,813 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-18 00:41:56,813 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-18 00:41:56,816 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-18 00:41:56,818 [ scc.git] DEBUG Already up to date. 2026-01-18 00:41:56,818 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-01-18 00:41:57,123 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-01-18 00:41:57,124 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-01-18 00:41:57,127 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-01-18 00:41:57,384 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-01-18 00:41:57,384 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-01-18 00:41:57,388 [ scc.git] DEBUG ## Unique users: [] 2026-01-18 00:41:57,388 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:41:57,388 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:57,390 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-01-18 00:41:57,393 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:57,395 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-01-18 00:41:57,403 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2026-01-18 00:41:57,403 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2026-01-18 00:41:57,403 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2026-01-18 00:41:57,403 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2026-01-18 00:41:57,403 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2026-01-18 00:41:57,403 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2026-01-18 00:41:57,403 [ scc.git] DEBUG Auto-merging setup.py 2026-01-18 00:41:57,403 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2026-01-18 00:41:57,403 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-01-18 00:41:57,403 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-01-18 00:41:57,406 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2026-01-18 00:41:57,410 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2026-01-18 00:41:57,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:41:57,547 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-01-18 00:41:57,550 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2026-01-18 00:41:57,552 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#23](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - omero_signup/views.py - omero_signup/signup_settings.py - setup.py --conflicts 2026-01-18 00:41:57,554 [ scc.config] DEBUG Found github.token 2026-01-18 00:41:57,555 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2026-01-18 00:41:57,555 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-01-18 00:41:57,557 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:57,559 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-01-18 00:41:57,565 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:41:57,568 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-01-18 00:41:57,568 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-18 00:41:57,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:41:57,962 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-18 00:41:57,999 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:41:57,999 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:41:58,002 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:41:58,038 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-18 00:41:58,042 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9144673250> has no local changes 2026-01-18 00:41:58,042 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2026-01-18 00:41:58,047 [ scc.git] DEBUG [detached HEAD 7686d0a] merge master -Dorg -Ssuccess-only 2026-01-18 00:41:58,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:41:58,047 [ scc.repo] DEBUG ## PRs found: 2026-01-18 00:41:58,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2026-01-18 00:41:59,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2026-01-18 00:41:59,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2026-01-18 00:41:59,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2026-01-18 00:42:00,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2026-01-18 00:42:00,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:42:01,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:42:01,517 [ scc.repo] DEBUG ## Branches found: 2026-01-18 00:42:01,517 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-01-18 00:42:01,517 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:42:01,517 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:01,520 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-18 00:42:01,522 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-18 00:42:01,522 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-18 00:42:01,525 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-18 00:42:01,532 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2026-01-18 00:42:02,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2026-01-18 00:42:03,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2026-01-18 00:42:03,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2026-01-18 00:42:03,795 [ scc.git] DEBUG ## Unique users: [] 2026-01-18 00:42:03,795 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:42:03,795 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:03,797 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-18 00:42:03,836 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:42:03,836 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:03,838 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:42:03,876 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-18 00:42:03,879 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f91446c9910> has no local changes 2026-01-18 00:42:03,879 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2026-01-18 00:42:03,885 [ scc.git] DEBUG [detached HEAD 64ecbb5] merge master -Dorg -Ssuccess-only 2026-01-18 00:42:03,886 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:03,886 [ scc.repo] DEBUG ## PRs found: 2026-01-18 00:42:04,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2026-01-18 00:42:04,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2026-01-18 00:42:04,783 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:42:05,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2026-01-18 00:42:05,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:42:06,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:42:06,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2026-01-18 00:42:07,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:42:07,243 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-18 00:42:07,243 [ scc.repo] DEBUG ## Branches found: 2026-01-18 00:42:07,243 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-01-18 00:42:07,243 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:42:07,243 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:07,246 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-18 00:42:07,248 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-18 00:42:07,248 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-18 00:42:07,251 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-18 00:42:07,253 [ scc.git] DEBUG Already up to date. 2026-01-18 00:42:07,253 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-01-18 00:42:07,537 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2026-01-18 00:42:07,537 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-01-18 00:42:07,541 [ scc.git] DEBUG ## Unique users: [] 2026-01-18 00:42:07,541 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:42:07,541 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:07,543 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-01-18 00:42:07,546 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:07,548 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-01-18 00:42:07,554 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:42:07,556 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-01-18 00:42:07,556 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-18 00:42:07,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:07,708 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-18 00:42:07,746 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:42:07,746 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:07,748 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:42:07,786 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-18 00:42:07,789 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9146ff86d0> has no local changes 2026-01-18 00:42:07,789 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2026-01-18 00:42:07,794 [ scc.git] DEBUG [detached HEAD 1dfae44] merge master -Dorg -Ssuccess-only 2026-01-18 00:42:07,795 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:07,795 [ scc.repo] DEBUG ## PRs found: 2026-01-18 00:42:08,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2026-01-18 00:42:08,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2026-01-18 00:42:08,911 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:42:09,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2026-01-18 00:42:10,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:42:10,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:42:11,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2026-01-18 00:42:11,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:42:11,713 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-18 00:42:11,713 [ scc.repo] DEBUG ## Branches found: 2026-01-18 00:42:11,713 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-01-18 00:42:11,713 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:42:11,713 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:11,716 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-18 00:42:11,718 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-18 00:42:11,718 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-18 00:42:11,721 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-18 00:42:11,727 [ scc.git] DEBUG Updating deab817..160d894 2026-01-18 00:42:12,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2026-01-18 00:42:12,480 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-01-18 00:42:12,751 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2026-01-18 00:42:12,751 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-01-18 00:42:12,754 [ scc.git] DEBUG ## Unique users: [] 2026-01-18 00:42:12,755 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:42:12,755 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:12,757 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-01-18 00:42:12,759 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:12,762 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-01-18 00:42:12,768 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:42:12,771 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-01-18 00:42:12,771 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-18 00:42:12,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:12,919 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-18 00:42:12,959 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:42:12,959 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:12,961 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:42:12,998 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-18 00:42:13,001 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f91446ebdd0> has no local changes 2026-01-18 00:42:13,001 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2026-01-18 00:42:13,007 [ scc.git] DEBUG [detached HEAD 9a81d21] merge master -Dorg -Ssuccess-only 2026-01-18 00:42:13,007 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:13,007 [ scc.git] INFO Overriding base-branch from master to main 2026-01-18 00:42:13,007 [ scc.repo] DEBUG ## PRs found: 2026-01-18 00:42:13,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2026-01-18 00:42:13,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2026-01-18 00:42:14,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2026-01-18 00:42:14,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2026-01-18 00:42:15,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:42:15,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:42:16,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2026-01-18 00:42:16,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:42:16,691 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2026-01-18 00:42:17,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2026-01-18 00:42:17,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2026-01-18 00:42:18,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2026-01-18 00:42:18,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2026-01-18 00:42:19,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:42:19,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2026-01-18 00:42:20,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:42:20,047 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-01-18 00:42:20,047 [ scc.repo] DEBUG ## Branches found: 2026-01-18 00:42:20,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-01-18 00:42:20,047 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:42:20,047 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:20,050 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2026-01-18 00:42:20,052 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-18 00:42:20,052 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2026-01-18 00:42:20,055 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2026-01-18 00:42:20,061 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2026-01-18 00:42:20,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2026-01-18 00:42:21,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2026-01-18 00:42:21,437 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2026-01-18 00:42:21,715 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-01-18 00:42:21,715 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2026-01-18 00:42:21,718 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2026-01-18 00:42:21,984 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-01-18 00:42:21,984 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2026-01-18 00:42:21,988 [ scc.git] DEBUG ## Unique users: [] 2026-01-18 00:42:21,988 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:42:21,988 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:21,990 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-01-18 00:42:21,993 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:21,995 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-01-18 00:42:22,002 [ scc.git] DEBUG Auto-merging README.rst 2026-01-18 00:42:22,002 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2026-01-18 00:42:22,002 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2026-01-18 00:42:22,002 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-01-18 00:42:22,002 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-01-18 00:42:22,003 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-01-18 00:42:22,005 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-01-18 00:42:22,010 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-01-18 00:42:22,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:22,141 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-01-18 00:42:22,144 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-01-18 00:42:22,146 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#23](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2026-01-18 00:42:22,148 [ scc.config] DEBUG Found github.token 2026-01-18 00:42:22,148 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2026-01-18 00:42:22,148 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-01-18 00:42:22,151 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:22,153 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-01-18 00:42:22,160 [ scc.git] DEBUG Auto-merging README.rst 2026-01-18 00:42:22,160 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-01-18 00:42:22,161 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:42:22,164 [ scc.git] DEBUG README.rst | 3 + 2026-01-18 00:42:22,164 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2026-01-18 00:42:22,164 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2026-01-18 00:42:22,164 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2026-01-18 00:42:22,164 [ scc.git] DEBUG setup.py | 5 +- 2026-01-18 00:42:22,164 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2026-01-18 00:42:22,164 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2026-01-18 00:42:22,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:22,527 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-18 00:42:22,565 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:42:22,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:22,567 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:42:22,606 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-18 00:42:22,609 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f91446e1ad0> has no local changes 2026-01-18 00:42:22,609 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2026-01-18 00:42:22,615 [ scc.git] DEBUG [detached HEAD 429c9b2] merge master -Dorg -Ssuccess-only 2026-01-18 00:42:22,615 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:22,615 [ scc.repo] DEBUG ## PRs found: 2026-01-18 00:42:23,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2026-01-18 00:42:23,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2026-01-18 00:42:23,491 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:42:24,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2026-01-18 00:42:24,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:42:25,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:42:25,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2026-01-18 00:42:26,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:42:26,407 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-18 00:42:26,407 [ scc.repo] DEBUG ## Branches found: 2026-01-18 00:42:26,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-01-18 00:42:26,407 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:42:26,407 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:26,410 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-18 00:42:26,412 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-18 00:42:26,412 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-18 00:42:26,415 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-18 00:42:26,417 [ scc.git] DEBUG Already up to date. 2026-01-18 00:42:26,417 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2026-01-18 00:42:26,684 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2026-01-18 00:42:26,684 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2026-01-18 00:42:26,688 [ scc.git] DEBUG ## Unique users: [] 2026-01-18 00:42:26,688 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:42:26,688 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:26,690 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-01-18 00:42:26,692 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:26,694 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-01-18 00:42:26,701 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:42:26,703 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-01-18 00:42:26,703 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-18 00:42:26,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:26,859 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-18 00:42:26,897 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:42:26,897 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:26,900 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:42:26,937 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-18 00:42:26,940 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9144718f50> has no local changes 2026-01-18 00:42:26,940 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2026-01-18 00:42:26,946 [ scc.git] DEBUG [detached HEAD 073e7f6] merge master -Dorg -Ssuccess-only 2026-01-18 00:42:26,946 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:26,946 [ scc.repo] DEBUG ## PRs found: 2026-01-18 00:42:27,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2026-01-18 00:42:27,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2026-01-18 00:42:27,875 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-18 00:42:28,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2026-01-18 00:42:28,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-18 00:42:29,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-18 00:42:29,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2026-01-18 00:42:30,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2026-01-18 00:42:30,335 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-18 00:42:30,335 [ scc.repo] DEBUG ## Branches found: 2026-01-18 00:42:30,335 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-01-18 00:42:30,335 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:42:30,335 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:30,338 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-18 00:42:30,340 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-18 00:42:30,341 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-18 00:42:30,343 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-18 00:42:30,346 [ scc.git] DEBUG Already up to date. 2026-01-18 00:42:30,346 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2026-01-18 00:42:30,614 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2026-01-18 00:42:30,614 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2026-01-18 00:42:30,618 [ scc.git] DEBUG ## Unique users: [] 2026-01-18 00:42:30,618 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:42:30,618 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:30,620 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-01-18 00:42:30,622 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:30,624 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-01-18 00:42:30,631 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-18 00:42:30,634 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-01-18 00:42:30,634 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-18 00:42:30,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:30,773 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-18 00:42:30,812 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:42:30,812 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:30,814 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:42:30,850 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-18 00:42:30,853 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f914714be50> has no local changes 2026-01-18 00:42:30,853 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2026-01-18 00:42:30,859 [ scc.git] DEBUG [detached HEAD 2972e35] merge master -Dorg -Ssuccess-only 2026-01-18 00:42:30,859 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:30,859 [ scc.repo] DEBUG ## PRs found: 2026-01-18 00:42:31,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2026-01-18 00:42:31,215 [ scc.repo] DEBUG ## Branches found: 2026-01-18 00:42:31,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-01-18 00:42:31,215 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:42:31,215 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:31,218 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-18 00:42:31,220 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-18 00:42:31,220 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-18 00:42:31,223 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-18 00:42:31,225 [ scc.git] DEBUG Already up to date. 2026-01-18 00:42:31,225 [ scc.git] DEBUG ## Unique users: [] 2026-01-18 00:42:31,225 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:42:31,225 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:31,228 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-18 00:42:31,265 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:42:31,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:31,267 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:42:31,301 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-18 00:42:31,304 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9144700e50> has no local changes 2026-01-18 00:42:31,304 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2026-01-18 00:42:31,310 [ scc.git] DEBUG [detached HEAD 0ec757f] merge master -Dorg -Ssuccess-only 2026-01-18 00:42:31,310 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:31,310 [ scc.git] INFO Overriding base-branch from master to develop 2026-01-18 00:42:31,310 [ scc.repo] DEBUG ## PRs found: 2026-01-18 00:42:31,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2026-01-18 00:42:32,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2026-01-18 00:42:32,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2026-01-18 00:42:32,732 [ scc.repo] DEBUG ## Branches found: 2026-01-18 00:42:32,732 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-01-18 00:42:32,732 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:42:32,732 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:32,734 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-01-18 00:42:32,737 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-18 00:42:32,737 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-01-18 00:42:32,739 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-01-18 00:42:32,750 [ scc.git] DEBUG Updating 4b4c755..fb91f15 2026-01-18 00:42:33,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-01-18 00:42:34,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-01-18 00:42:34,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-01-18 00:42:35,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-01-18 00:42:36,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2026-01-18 00:42:36,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2026-01-18 00:42:37,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2026-01-18 00:42:37,670 [ scc.git] DEBUG ## Unique users: [] 2026-01-18 00:42:37,670 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:42:37,670 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:37,673 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-18 00:42:37,712 [ scc.git] DEBUG Get sha1 of %s 2026-01-18 00:42:37,712 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-18 00:42:37,714 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:42:37,751 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-18 00:42:37,755 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f914474a990> has no local changes 2026-01-18 00:42:37,755 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) Updating 4b4c755..fb91f15 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2026-01-18 00:42:37,762 [ scc.git] DEBUG [detached HEAD 30188f9] merge master -Dorg -Ssuccess-only 2026-01-18 00:42:37,762 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:37,762 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-18 00:42:37,832 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2026-01-18 00:42:38,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:38,066 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2026-01-18 00:42:38,067 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2026-01-18 00:42:38,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:38,480 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2026-01-18 00:42:38,482 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2026-01-18 00:42:38,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:38,893 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2026-01-18 00:42:38,895 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2026-01-18 00:42:39,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:39,343 [ scc.config] DEBUG Found submodule.omero-figure.url 2026-01-18 00:42:39,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:39,728 [ scc.config] DEBUG Found submodule.omero-figure.branch 2026-01-18 00:42:39,730 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2026-01-18 00:42:40,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:40,118 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2026-01-18 00:42:40,120 [ scc.config] DEBUG Found submodule.omero-gallery.url 2026-01-18 00:42:40,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:40,509 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2026-01-18 00:42:40,511 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2026-01-18 00:42:40,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:40,899 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2026-01-18 00:42:40,901 [ scc.config] DEBUG Found submodule.omero-mapr.url 2026-01-18 00:42:41,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:41,286 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2026-01-18 00:42:41,288 [ scc.config] DEBUG Found submodule.omero-metadata.url 2026-01-18 00:42:41,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:41,693 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2026-01-18 00:42:41,695 [ scc.config] DEBUG Found submodule.omero-parade.url 2026-01-18 00:42:42,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:42,180 [ scc.config] DEBUG Found submodule.omero-parade.branch 2026-01-18 00:42:42,182 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2026-01-18 00:42:42,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:42,582 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2026-01-18 00:42:42,584 [ scc.config] DEBUG Found submodule.omero-rois.url 2026-01-18 00:42:43,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:43,121 [ scc.config] DEBUG Found submodule.omero-signup.url 2026-01-18 00:42:43,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:43,509 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2026-01-18 00:42:44,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:44,121 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2026-01-18 00:42:44,123 [ scc.config] DEBUG Found submodule.omero-upload.url 2026-01-18 00:42:44,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:44,517 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2026-01-18 00:42:44,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:44,934 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2026-01-18 00:42:45,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:45,328 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2026-01-18 00:42:45,330 [ scc.config] DEBUG Found submodule.omero-weberror.url 2026-01-18 00:42:45,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:45,725 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2026-01-18 00:42:45,727 [ scc.config] DEBUG Found submodule.omero-webtest.url 2026-01-18 00:42:46,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:46,127 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2026-01-18 00:42:46,129 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2026-01-18 00:42:46,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:46,544 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2026-01-18 00:42:46,546 [ scc.config] DEBUG Found submodule.scripts.url 2026-01-18 00:42:46,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-18 00:42:46,946 [ scc.config] DEBUG Found submodule.scripts.branch 2026-01-18 00:42:46,946 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-18 00:42:47,020 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f91474cd210> has local changes 2026-01-18 00:42:47,021 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..37ea700 Previously merged: - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 174 will-moore 'Skip wells' - PR 181 will-moore 'Add labels support for import' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' Conflicting PRs (not included): - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Excluded PRs: - PR 662 will-moore 'Export script runnable OMERO' (stage: draft) - PR 619 will-moore 'OME-Zarr support' (stage: draft) Updating 9cc36cde..ddcf816a Previously merged: - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 659 will-moore 'Fix ability of export script to be installed and run without reportlab' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..5e2de43 Previously merged: - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 513 jburel 'Bump Python version' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) Updating 4b4c755..fb91f15 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2026-01-18 00:42:47,032 [ scc.git] DEBUG [detached HEAD 513bad7] merge master -Dorg -Ssuccess-only 2026-01-18 00:42:47,032 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2026-01-18 00:42:47,032 [ scc.merge] INFO Repository: ome/omero-plugins 2026-01-18 00:42:47,032 [ scc.merge] INFO Already up to date. 2026-01-18 00:42:47,032 [ scc.merge] INFO 2026-01-18 00:42:47,032 [ scc.merge] INFO Merged PRs: 2026-01-18 00:42:47,032 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-01-18 00:42:47,032 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-01-18 00:42:47,032 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-01-18 00:42:47,032 [ scc.merge] INFO 2026-01-18 00:42:47,032 [ scc.merge] INFO Repository: ome/minimal-omero-client 2026-01-18 00:42:47,032 [ scc.merge] INFO Already up to date. 2026-01-18 00:42:47,032 [ scc.merge] INFO 2026-01-18 00:42:47,032 [ scc.merge] INFO 2026-01-18 00:42:47,032 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2026-01-18 00:42:47,032 [ scc.merge] INFO Excluded PRs: 2026-01-18 00:42:47,032 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2026-01-18 00:42:47,032 [ scc.merge] INFO Already up to date. 2026-01-18 00:42:47,032 [ scc.merge] INFO 2026-01-18 00:42:47,032 [ scc.merge] INFO Merged PRs: 2026-01-18 00:42:47,032 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-18 00:42:47,032 [ scc.merge] INFO 2026-01-18 00:42:47,032 [ scc.merge] INFO Repository: ome/omero-cli-render 2026-01-18 00:42:47,032 [ scc.merge] INFO Excluded PRs: 2026-01-18 00:42:47,032 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2026-01-18 00:42:47,032 [ scc.merge] INFO Updating ce6e13c..68b7303 2026-01-18 00:42:47,032 [ scc.merge] INFO Previously merged: 2026-01-18 00:42:47,032 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2026-01-18 00:42:47,032 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2026-01-18 00:42:47,032 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2026-01-18 00:42:47,032 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2026-01-18 00:42:47,032 [ scc.merge] INFO 2026-01-18 00:42:47,033 [ scc.merge] INFO Merged PRs: 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2026-01-18 00:42:47,033 [ scc.merge] INFO 2026-01-18 00:42:47,033 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2026-01-18 00:42:47,033 [ scc.merge] INFO Excluded PRs: 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure) 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2026-01-18 00:42:47,033 [ scc.merge] INFO Updating 11d3587..37ea700 2026-01-18 00:42:47,033 [ scc.merge] INFO Previously merged: 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-01-18 00:42:47,033 [ scc.merge] INFO 2026-01-18 00:42:47,033 [ scc.merge] INFO Merged PRs: 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option' 2026-01-18 00:42:47,033 [ scc.merge] INFO 2026-01-18 00:42:47,033 [ scc.merge] INFO Conflicting PRs (not included): 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-01-18 00:42:47,033 [ scc.merge] INFO 2026-01-18 00:42:47,033 [ scc.merge] INFO Repository: ome/omero-figure 2026-01-18 00:42:47,033 [ scc.merge] INFO Excluded PRs: 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 662 will-moore 'Export script runnable OMERO' (stage: draft) 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft) 2026-01-18 00:42:47,033 [ scc.merge] INFO Updating 9cc36cde..ddcf816a 2026-01-18 00:42:47,033 [ scc.merge] INFO Previously merged: 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2026-01-18 00:42:47,033 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-01-18 00:42:47,034 [ scc.merge] INFO 2026-01-18 00:42:47,034 [ scc.merge] INFO Merged PRs: 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 659 will-moore 'Fix ability of export script to be installed and run without reportlab' 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-01-18 00:42:47,034 [ scc.merge] INFO 2026-01-18 00:42:47,034 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2026-01-18 00:42:47,034 [ scc.merge] INFO Already up to date. 2026-01-18 00:42:47,034 [ scc.merge] INFO 2026-01-18 00:42:47,034 [ scc.merge] INFO Merged PRs: 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-18 00:42:47,034 [ scc.merge] INFO 2026-01-18 00:42:47,034 [ scc.merge] INFO Repository: ome/omero-gallery 2026-01-18 00:42:47,034 [ scc.merge] INFO Already up to date. 2026-01-18 00:42:47,034 [ scc.merge] INFO 2026-01-18 00:42:47,034 [ scc.merge] INFO Merged PRs: 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-01-18 00:42:47,034 [ scc.merge] INFO 2026-01-18 00:42:47,034 [ scc.merge] INFO Conflicting PRs (not included): 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-01-18 00:42:47,034 [ scc.merge] INFO 2026-01-18 00:42:47,034 [ scc.merge] INFO Repository: ome/omero-iviewer 2026-01-18 00:42:47,034 [ scc.merge] INFO Excluded PRs: 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft) 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2026-01-18 00:42:47,034 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2026-01-18 00:42:47,035 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure) 2026-01-18 00:42:47,035 [ scc.merge] INFO Updating 7a798ce..5e2de43 2026-01-18 00:42:47,035 [ scc.merge] INFO Previously merged: 2026-01-18 00:42:47,035 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2026-01-18 00:42:47,035 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-01-18 00:42:47,035 [ scc.merge] INFO 2026-01-18 00:42:47,035 [ scc.merge] INFO Merged PRs: 2026-01-18 00:42:47,035 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2026-01-18 00:42:47,035 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2026-01-18 00:42:47,035 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2026-01-18 00:42:47,035 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2026-01-18 00:42:47,035 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-01-18 00:42:47,035 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2026-01-18 00:42:47,035 [ scc.merge] INFO 2026-01-18 00:42:47,035 [ scc.merge] INFO Conflicting PRs (not included): 2026-01-18 00:42:47,035 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2026-01-18 00:42:47,035 [ scc.merge] INFO 2026-01-18 00:42:47,035 [ scc.merge] INFO Repository: ome/omero-mapr 2026-01-18 00:42:47,035 [ scc.merge] INFO Excluded PRs: 2026-01-18 00:42:47,035 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2026-01-18 00:42:47,035 [ scc.merge] INFO Already up to date. 2026-01-18 00:42:47,035 [ scc.merge] INFO 2026-01-18 00:42:47,035 [ scc.merge] INFO Merged PRs: 2026-01-18 00:42:47,035 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2026-01-18 00:42:47,035 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-01-18 00:42:47,035 [ scc.merge] INFO 2026-01-18 00:42:47,035 [ scc.merge] INFO Conflicting PRs (not included): 2026-01-18 00:42:47,035 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-18 00:42:47,035 [ scc.merge] INFO 2026-01-18 00:42:47,035 [ scc.merge] INFO Repository: ome/omero-metadata 2026-01-18 00:42:47,035 [ scc.merge] INFO Updating 3cd120c..55060a2 2026-01-18 00:42:47,035 [ scc.merge] INFO Previously merged: 2026-01-18 00:42:47,035 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-01-18 00:42:47,035 [ scc.merge] INFO 2026-01-18 00:42:47,035 [ scc.merge] INFO Merged PRs: 2026-01-18 00:42:47,035 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-01-18 00:42:47,035 [ scc.merge] INFO 2026-01-18 00:42:47,035 [ scc.merge] INFO Conflicting PRs (not included): 2026-01-18 00:42:47,035 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-01-18 00:42:47,035 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-01-18 00:42:47,035 [ scc.merge] INFO 2026-01-18 00:42:47,035 [ scc.merge] INFO Repository: ome/omero-parade 2026-01-18 00:42:47,035 [ scc.merge] INFO Excluded PRs: 2026-01-18 00:42:47,035 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2026-01-18 00:42:47,035 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2026-01-18 00:42:47,035 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2026-01-18 00:42:47,035 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2026-01-18 00:42:47,035 [ scc.merge] INFO Already up to date. 2026-01-18 00:42:47,035 [ scc.merge] INFO 2026-01-18 00:42:47,036 [ scc.merge] INFO Merged PRs: 2026-01-18 00:42:47,036 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-01-18 00:42:47,036 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-01-18 00:42:47,036 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-01-18 00:42:47,036 [ scc.merge] INFO 2026-01-18 00:42:47,036 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2026-01-18 00:42:47,036 [ scc.merge] INFO Already up to date. 2026-01-18 00:42:47,036 [ scc.merge] INFO 2026-01-18 00:42:47,036 [ scc.merge] INFO Merged PRs: 2026-01-18 00:42:47,036 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-18 00:42:47,036 [ scc.merge] INFO 2026-01-18 00:42:47,036 [ scc.merge] INFO Repository: ome/omero-rois 2026-01-18 00:42:47,036 [ scc.merge] INFO Excluded PRs: 2026-01-18 00:42:47,036 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-01-18 00:42:47,036 [ scc.merge] INFO Already up to date. 2026-01-18 00:42:47,036 [ scc.merge] INFO 2026-01-18 00:42:47,036 [ scc.merge] INFO Merged PRs: 2026-01-18 00:42:47,036 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions' 2026-01-18 00:42:47,036 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-18 00:42:47,036 [ scc.merge] INFO 2026-01-18 00:42:47,036 [ scc.merge] INFO Repository: ome/omero-signup 2026-01-18 00:42:47,036 [ scc.merge] INFO Already up to date. 2026-01-18 00:42:47,036 [ scc.merge] INFO 2026-01-18 00:42:47,036 [ scc.merge] INFO Merged PRs: 2026-01-18 00:42:47,036 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-18 00:42:47,036 [ scc.merge] INFO 2026-01-18 00:42:47,036 [ scc.merge] INFO Conflicting PRs (not included): 2026-01-18 00:42:47,036 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2026-01-18 00:42:47,036 [ scc.merge] INFO 2026-01-18 00:42:47,036 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2026-01-18 00:42:47,036 [ scc.merge] INFO Excluded PRs: 2026-01-18 00:42:47,036 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2026-01-18 00:42:47,036 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2026-01-18 00:42:47,036 [ scc.merge] INFO Updating cda3ec6..c8a0015 2026-01-18 00:42:47,036 [ scc.merge] INFO Previously merged: 2026-01-18 00:42:47,036 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2026-01-18 00:42:47,036 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2026-01-18 00:42:47,036 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2026-01-18 00:42:47,036 [ scc.merge] INFO 2026-01-18 00:42:47,036 [ scc.merge] INFO 2026-01-18 00:42:47,036 [ scc.merge] INFO Repository: ome/omero-upload 2026-01-18 00:42:47,036 [ scc.merge] INFO Already up to date. 2026-01-18 00:42:47,036 [ scc.merge] INFO 2026-01-18 00:42:47,036 [ scc.merge] INFO Merged PRs: 2026-01-18 00:42:47,036 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-18 00:42:47,036 [ scc.merge] INFO 2026-01-18 00:42:47,036 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2026-01-18 00:42:47,036 [ scc.merge] INFO Updating deab817..160d894 2026-01-18 00:42:47,036 [ scc.merge] INFO Previously merged: 2026-01-18 00:42:47,036 [ scc.merge] INFO - PR 20 jburel 'Build' 2026-01-18 00:42:47,036 [ scc.merge] INFO 2026-01-18 00:42:47,037 [ scc.merge] INFO Merged PRs: 2026-01-18 00:42:47,037 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-18 00:42:47,037 [ scc.merge] INFO 2026-01-18 00:42:47,037 [ scc.merge] INFO Repository: ome/omero-web-zarr 2026-01-18 00:42:47,037 [ scc.merge] INFO Excluded PRs: 2026-01-18 00:42:47,037 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2026-01-18 00:42:47,037 [ scc.merge] INFO Updating 8f3c313..4e1e685 2026-01-18 00:42:47,037 [ scc.merge] INFO Previously merged: 2026-01-18 00:42:47,037 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2026-01-18 00:42:47,037 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2026-01-18 00:42:47,037 [ scc.merge] INFO 2026-01-18 00:42:47,037 [ scc.merge] INFO Merged PRs: 2026-01-18 00:42:47,037 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2026-01-18 00:42:47,037 [ scc.merge] INFO 2026-01-18 00:42:47,037 [ scc.merge] INFO Conflicting PRs (not included): 2026-01-18 00:42:47,037 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-01-18 00:42:47,037 [ scc.merge] INFO 2026-01-18 00:42:47,037 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2026-01-18 00:42:47,037 [ scc.merge] INFO Already up to date. 2026-01-18 00:42:47,037 [ scc.merge] INFO 2026-01-18 00:42:47,037 [ scc.merge] INFO Merged PRs: 2026-01-18 00:42:47,037 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-18 00:42:47,037 [ scc.merge] INFO 2026-01-18 00:42:47,037 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2026-01-18 00:42:47,037 [ scc.merge] INFO Already up to date. 2026-01-18 00:42:47,037 [ scc.merge] INFO 2026-01-18 00:42:47,037 [ scc.merge] INFO Merged PRs: 2026-01-18 00:42:47,037 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-18 00:42:47,037 [ scc.merge] INFO 2026-01-18 00:42:47,037 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2026-01-18 00:42:47,037 [ scc.merge] INFO Already up to date. 2026-01-18 00:42:47,037 [ scc.merge] INFO 2026-01-18 00:42:47,037 [ scc.merge] INFO 2026-01-18 00:42:47,037 [ scc.merge] INFO Repository: ome/scripts 2026-01-18 00:42:47,037 [ scc.merge] INFO Excluded PRs: 2026-01-18 00:42:47,037 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2026-01-18 00:42:47,037 [ scc.merge] INFO Updating 4b4c755..fb91f15 2026-01-18 00:42:47,037 [ scc.merge] INFO Previously merged: 2026-01-18 00:42:47,037 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-01-18 00:42:47,037 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-01-18 00:42:47,037 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-01-18 00:42:47,037 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-01-18 00:42:47,037 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2026-01-18 00:42:47,037 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2026-01-18 00:42:47,037 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2026-01-18 00:42:47,037 [ scc.merge] INFO 2026-01-18 00:42:47,037 [ scc.merge] INFO 2026-01-18 00:42:47,037 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-01-18 00:42:47,038 [ scc.git] DEBUG Calling 'git remote' 2026-01-18 00:42:47,040 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-01-18 00:42:47,040 [ scc.git] DEBUG Calling 'git remote' 2026-01-18 00:42:47,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:47,042 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-01-18 00:42:47,042 [ scc.git] DEBUG Calling 'git remote' 2026-01-18 00:42:47,044 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:47,044 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-01-18 00:42:47,044 [ scc.git] DEBUG Calling 'git remote' 2026-01-18 00:42:47,046 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:47,046 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-01-18 00:42:47,046 [ scc.git] DEBUG Calling 'git remote' 2026-01-18 00:42:47,048 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:47,048 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-01-18 00:42:47,048 [ scc.git] DEBUG Calling 'git remote' 2026-01-18 00:42:47,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:47,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-01-18 00:42:47,050 [ scc.git] DEBUG Calling 'git remote' 2026-01-18 00:42:47,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:47,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-01-18 00:42:47,052 [ scc.git] DEBUG Calling 'git remote' 2026-01-18 00:42:47,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:47,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-01-18 00:42:47,054 [ scc.git] DEBUG Calling 'git remote' 2026-01-18 00:42:47,056 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:47,056 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-01-18 00:42:47,056 [ scc.git] DEBUG Calling 'git remote' 2026-01-18 00:42:47,058 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:47,058 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-01-18 00:42:47,058 [ scc.git] DEBUG Calling 'git remote' 2026-01-18 00:42:47,060 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:47,060 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-01-18 00:42:47,060 [ scc.git] DEBUG Calling 'git remote' 2026-01-18 00:42:47,062 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:47,062 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-01-18 00:42:47,062 [ scc.git] DEBUG Calling 'git remote' 2026-01-18 00:42:47,064 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:47,064 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-01-18 00:42:47,064 [ scc.git] DEBUG Calling 'git remote' 2026-01-18 00:42:47,066 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:47,066 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-01-18 00:42:47,066 [ scc.git] DEBUG Calling 'git remote' 2026-01-18 00:42:47,068 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:47,068 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-01-18 00:42:47,068 [ scc.git] DEBUG Calling 'git remote' 2026-01-18 00:42:47,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:47,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-01-18 00:42:47,070 [ scc.git] DEBUG Calling 'git remote' 2026-01-18 00:42:47,072 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:47,072 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-01-18 00:42:47,072 [ scc.git] DEBUG Calling 'git remote' 2026-01-18 00:42:47,074 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:47,074 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-01-18 00:42:47,074 [ scc.git] DEBUG Calling 'git remote' 2026-01-18 00:42:47,076 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:47,076 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-01-18 00:42:47,076 [ scc.git] DEBUG Calling 'git remote' 2026-01-18 00:42:47,078 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:47,078 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-01-18 00:42:47,078 [ scc.git] DEBUG Calling 'git remote' 2026-01-18 00:42:47,080 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:47,080 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-01-18 00:42:47,080 [ scc.git] DEBUG Calling 'git remote' 2026-01-18 00:42:47,082 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-18 00:42:47,083 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-01-18 00:42:47,083 [ scc.git] DEBUG Calling 'git remote' 2026-01-18 00:42:47,084 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.5-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 411a590] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD 28f9d75] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-01-18 00:43:33,497 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-01-18 00:43:42,701 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-01-18 00:43:45,119 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-01-18 00:43:49,751 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-01-18 00:44:29,167 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS