Started by upstream project "Trigger" build number 46 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/80042be2aab2f4c47851263660cdf7971582cd0b3548009ec2196c6f3069ef1a/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 26 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.3-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.3 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-46.0.3-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.23-py3-none-any.whl.metadata (993 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (37 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.1.4-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.8.1-py3-none-any.whl (432 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-46.0.3-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (151 kB) Using cached idna-3.11-py3-none-any.whl (71 kB) Using cached certifi-2026.1.4-py3-none-any.whl (152 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.23-py3-none-any.whl (118 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2026.1.4 cffi-2.0.0 charset_normalizer-3.4.4 cryptography-46.0.3 future-1.0.0 idna-3.11 pycparser-2.23 pyjwt-2.10.1 pynacl-1.6.2 requests-2.32.5 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-01-19 00:36:43,770 [ scc.config] DEBUG Found github.token 2026-01-19 00:36:43,771 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-01-19 00:36:43,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:36:44,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:36:44,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-01-19 00:36:44,782 [ scc.gh] DEBUG 4270 remaining from 5000 (Reset at 01:01 2026-01-19 00:36:44,783 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-19 00:36:44,785 [ scc.git] DEBUG Check current status 2026-01-19 00:36:44,785 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-19 00:36:44,787 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-01-19 00:36:44,788 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-19 00:36:44,836 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-01-19 00:36:44,839 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-01-19 00:36:44,842 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-01-19 00:36:44,845 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-01-19 00:36:44,848 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-01-19 00:36:44,851 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-01-19 00:36:44,854 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-01-19 00:36:44,857 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-01-19 00:36:44,860 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-01-19 00:36:44,862 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-01-19 00:36:44,865 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-01-19 00:36:44,868 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-01-19 00:36:44,871 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-01-19 00:36:44,873 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-01-19 00:36:44,877 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-01-19 00:36:44,879 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-01-19 00:36:44,882 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-01-19 00:36:44,884 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-01-19 00:36:44,887 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-01-19 00:36:44,889 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-01-19 00:36:44,892 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-01-19 00:36:44,895 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-01-19 00:36:44,898 [ scc.config] DEBUG Found remote.origin.url 2026-01-19 00:36:45,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-01-19 00:36:45,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-19 00:36:46,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-19 00:36:46,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-19 00:36:47,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-19 00:36:47,072 [ scc.git] DEBUG Resetting... 2026-01-19 00:36:47,073 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-01-19 00:36:47,080 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-01-19 00:36:47,080 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-01-19 00:36:47,182 [ scc.git] DEBUG Check current status 2026-01-19 00:36:47,182 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-19 00:36:47,184 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-01-19 00:36:47,184 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-19 00:36:47,230 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-01-19 00:36:47,232 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-01-19 00:36:47,235 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-01-19 00:36:47,238 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-01-19 00:36:47,241 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-01-19 00:36:47,244 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-01-19 00:36:47,247 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-01-19 00:36:47,249 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-01-19 00:36:47,252 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-01-19 00:36:47,255 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-01-19 00:36:47,258 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-01-19 00:36:47,260 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-01-19 00:36:47,263 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-01-19 00:36:47,266 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-01-19 00:36:47,269 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-01-19 00:36:47,272 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-01-19 00:36:47,274 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-01-19 00:36:47,277 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-01-19 00:36:47,279 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-01-19 00:36:47,282 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-01-19 00:36:47,284 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-01-19 00:36:47,288 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-01-19 00:36:47,288 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-01-19 00:36:47,288 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-01-19 00:36:47,288 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-01-19 00:36:47,288 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-01-19 00:36:47,288 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-01-19 00:36:47,289 [ scc.repo] DEBUG ## PRs found: 2026-01-19 00:36:47,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-01-19 00:36:48,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-01-19 00:36:48,061 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:36:48,061 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-01-19 00:36:48,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-01-19 00:36:48,594 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:36:48,594 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-01-19 00:36:49,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-01-19 00:36:49,110 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:36:49,110 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-01-19 00:36:49,110 [ scc.repo] DEBUG ## Branches found: 2026-01-19 00:36:49,110 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:36:49,110 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:36:49,112 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-19 00:36:49,114 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-19 00:36:49,114 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-19 00:36:49,117 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-19 00:36:49,119 [ scc.git] DEBUG Already up to date. 2026-01-19 00:36:49,119 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-01-19 00:36:49,398 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-01-19 00:36:49,398 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-01-19 00:36:49,402 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-01-19 00:36:49,663 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-01-19 00:36:49,663 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-01-19 00:36:49,667 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-01-19 00:36:49,915 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-01-19 00:36:49,915 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-01-19 00:36:49,919 [ scc.git] DEBUG ## Unique users: [] 2026-01-19 00:36:49,919 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:36:49,919 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:36:49,921 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-01-19 00:36:49,924 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:36:49,926 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-01-19 00:36:49,940 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:36:49,943 [ scc.git] DEBUG scripts | 2 +- 2026-01-19 00:36:49,943 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-19 00:36:50,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:36:50,080 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-01-19 00:36:50,083 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:36:50,085 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-01-19 00:36:50,099 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:36:50,101 [ scc.git] DEBUG omero-figure | 2 +- 2026-01-19 00:36:50,102 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-19 00:36:50,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:36:50,482 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-01-19 00:36:50,484 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:36:50,486 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-01-19 00:36:50,501 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:36:50,504 [ scc.git] DEBUG omero-iviewer | 2 +- 2026-01-19 00:36:50,504 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-19 00:36:51,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:36:51,042 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-19 00:36:51,101 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-01-19 00:36:51,124 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-01-19 00:36:51,138 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-01-19 00:36:51,139 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:36:51,139 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:36:51,141 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-19 00:36:51,220 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f26587f4350> has no local changes 2026-01-19 00:36:51,221 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#24 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/)' 2026-01-19 00:36:51,395 [ scc.git] DEBUG [detached HEAD 097de6d] merge master -Dorg -Snone 2026-01-19 00:36:51,395 [ scc.merge] INFO Repository: ome/omero-plugins 2026-01-19 00:36:51,395 [ scc.merge] INFO Already up to date. 2026-01-19 00:36:51,395 [ scc.merge] INFO 2026-01-19 00:36:51,395 [ scc.merge] INFO Merged PRs: 2026-01-19 00:36:51,395 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-01-19 00:36:51,395 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-01-19 00:36:51,396 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-01-19 00:36:51,396 [ scc.merge] INFO 2026-01-19 00:36:51,396 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-01-19 00:36:51,396 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' Submodule path 'omero-cli-zarr': checked out '37ea7000309b4f8b87c5122c138fb59b17ecf86b' Submodule path 'omero-figure': checked out 'ddcf816a934ca3f96d05d06cfe3c1fc46016f660' Submodule path 'omero-iviewer': checked out '5e2de43ad401fb00690a79644056e0ac15fabfd5' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out 'fb91f15608d9a2c3ef9e2f56b19d4f2c9d6ac3e6' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2026-01-19 00:36:58,137 [ scc.config] DEBUG Found github.token 2026-01-19 00:36:58,139 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-01-19 00:36:58,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:36:58,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:36:59,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-01-19 00:36:59,117 [ scc.gh] DEBUG 4256 remaining from 5000 (Reset at 01:01 2026-01-19 00:36:59,117 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-19 00:36:59,119 [ scc.git] DEBUG Check current status 2026-01-19 00:36:59,120 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-19 00:36:59,122 [ scc.git] DEBUG 097de6d merge master -Dorg -Snone 2026-01-19 00:36:59,122 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-19 00:36:59,167 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-01-19 00:36:59,170 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-01-19 00:36:59,173 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2026-01-19 00:36:59,175 [ scc.git] DEBUG +37ea7000309b4f8b87c5122c138fb59b17ecf86b omero-cli-zarr (v0.7.0rc1-2-g37ea700) 2026-01-19 00:36:59,179 [ scc.git] DEBUG +ddcf816a934ca3f96d05d06cfe3c1fc46016f660 omero-figure (v7.3.0-1-gddcf816a) 2026-01-19 00:36:59,181 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-01-19 00:36:59,184 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-01-19 00:36:59,188 [ scc.git] DEBUG +5e2de43ad401fb00690a79644056e0ac15fabfd5 omero-iviewer (v0.16.0-20-g5e2de43) 2026-01-19 00:36:59,190 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-01-19 00:36:59,193 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2026-01-19 00:36:59,196 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-01-19 00:36:59,199 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-01-19 00:36:59,202 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-01-19 00:36:59,205 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-01-19 00:36:59,208 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2026-01-19 00:36:59,211 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-01-19 00:36:59,213 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2026-01-19 00:36:59,216 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2026-01-19 00:36:59,218 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-01-19 00:36:59,221 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-01-19 00:36:59,224 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-01-19 00:36:59,228 [ scc.git] DEBUG +fb91f15608d9a2c3ef9e2f56b19d4f2c9d6ac3e6 scripts (v5.9.1-20-gfb91f15) 2026-01-19 00:36:59,231 [ scc.config] DEBUG Found remote.origin.url 2026-01-19 00:36:59,231 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-01-19 00:36:59,232 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2026-01-19 00:36:59,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-01-19 00:37:00,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-19 00:37:00,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-19 00:37:00,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-19 00:37:01,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-19 00:37:01,360 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:37:01,430 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-01-19 00:37:01,430 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-19 00:37:01,432 [ scc.git] DEBUG Check current status 2026-01-19 00:37:01,432 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-19 00:37:01,435 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2026-01-19 00:37:01,435 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-19 00:37:01,474 [ scc.config] DEBUG Found remote.origin.url 2026-01-19 00:37:01,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2026-01-19 00:37:02,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-19 00:37:02,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-19 00:37:03,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-19 00:37:03,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-19 00:37:03,573 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:37:03,610 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:37:03,610 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-01-19 00:37:03,611 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-19 00:37:03,613 [ scc.git] DEBUG Check current status 2026-01-19 00:37:03,613 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-19 00:37:03,615 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2026-01-19 00:37:03,615 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-19 00:37:03,653 [ scc.config] DEBUG Found remote.origin.url 2026-01-19 00:37:04,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2026-01-19 00:37:04,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-19 00:37:05,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-19 00:37:05,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-19 00:37:05,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-19 00:37:05,826 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:37:05,865 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:37:05,866 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-01-19 00:37:05,866 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-19 00:37:05,868 [ scc.git] DEBUG Check current status 2026-01-19 00:37:05,868 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-19 00:37:05,870 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2026-01-19 00:37:05,870 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-19 00:37:05,909 [ scc.config] DEBUG Found remote.origin.url 2026-01-19 00:37:06,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2026-01-19 00:37:06,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-19 00:37:07,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-19 00:37:07,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-19 00:37:08,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-19 00:37:08,189 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:37:08,227 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:37:08,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-01-19 00:37:08,228 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-19 00:37:08,230 [ scc.git] DEBUG Check current status 2026-01-19 00:37:08,230 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-19 00:37:08,232 [ scc.git] DEBUG 37ea700 Bump version: 0.7.0rc1 → 0.7.1.dev0 2026-01-19 00:37:08,232 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-19 00:37:08,271 [ scc.config] DEBUG Found remote.origin.url 2026-01-19 00:37:08,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2026-01-19 00:37:09,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-19 00:37:09,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-19 00:37:10,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-19 00:37:10,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-19 00:37:10,437 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:37:10,475 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:37:10,475 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-01-19 00:37:10,475 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-19 00:37:10,477 [ scc.git] DEBUG Check current status 2026-01-19 00:37:10,477 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-19 00:37:10,480 [ scc.git] DEBUG ddcf816a Bump version: 7.3.0 → 7.3.1.dev0 2026-01-19 00:37:10,480 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-19 00:37:10,520 [ scc.config] DEBUG Found remote.origin.url 2026-01-19 00:37:10,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2026-01-19 00:37:11,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-19 00:37:11,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-19 00:37:12,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-19 00:37:12,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-19 00:37:12,747 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:37:12,786 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:37:12,787 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-01-19 00:37:12,787 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-19 00:37:12,789 [ scc.git] DEBUG Check current status 2026-01-19 00:37:12,789 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-19 00:37:12,791 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2026-01-19 00:37:12,791 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-19 00:37:12,832 [ scc.config] DEBUG Found remote.origin.url 2026-01-19 00:37:13,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2026-01-19 00:37:13,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-19 00:37:14,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-19 00:37:14,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-19 00:37:15,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-19 00:37:15,038 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:37:15,076 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:37:15,077 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-01-19 00:37:15,077 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-19 00:37:15,079 [ scc.git] DEBUG Check current status 2026-01-19 00:37:15,079 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-19 00:37:15,081 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2026-01-19 00:37:15,082 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-19 00:37:15,122 [ scc.config] DEBUG Found remote.origin.url 2026-01-19 00:37:15,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2026-01-19 00:37:16,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-19 00:37:16,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-19 00:37:16,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-19 00:37:17,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-19 00:37:17,482 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:37:17,520 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:37:17,520 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-01-19 00:37:17,520 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-19 00:37:17,523 [ scc.git] DEBUG Check current status 2026-01-19 00:37:17,523 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-19 00:37:17,525 [ scc.git] DEBUG 5e2de43 Merge pull request #510 from joshmoore/issue-509 2026-01-19 00:37:17,525 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-19 00:37:17,564 [ scc.config] DEBUG Found remote.origin.url 2026-01-19 00:37:18,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2026-01-19 00:37:18,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-19 00:37:19,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-19 00:37:19,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-19 00:37:19,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-19 00:37:19,978 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:37:20,018 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:37:20,018 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-01-19 00:37:20,018 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-19 00:37:20,020 [ scc.git] DEBUG Check current status 2026-01-19 00:37:20,020 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-19 00:37:20,022 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2026-01-19 00:37:20,023 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-19 00:37:20,063 [ scc.config] DEBUG Found remote.origin.url 2026-01-19 00:37:20,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2026-01-19 00:37:21,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-19 00:37:21,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-19 00:37:21,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-19 00:37:22,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-19 00:37:22,350 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:37:22,390 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:37:22,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-01-19 00:37:22,391 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-19 00:37:22,393 [ scc.git] DEBUG Check current status 2026-01-19 00:37:22,393 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-19 00:37:22,395 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-01-19 00:37:22,395 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-19 00:37:22,436 [ scc.config] DEBUG Found remote.origin.url 2026-01-19 00:37:22,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2026-01-19 00:37:23,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-19 00:37:23,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-19 00:37:24,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-19 00:37:24,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-19 00:37:24,676 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:37:24,715 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:37:24,715 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-01-19 00:37:24,715 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-19 00:37:24,717 [ scc.git] DEBUG Check current status 2026-01-19 00:37:24,717 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-19 00:37:24,720 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2026-01-19 00:37:24,720 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-19 00:37:24,759 [ scc.config] DEBUG Found remote.origin.url 2026-01-19 00:37:25,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2026-01-19 00:37:25,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-19 00:37:26,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-19 00:37:26,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-19 00:37:26,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-19 00:37:26,892 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:37:26,931 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:37:26,931 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-01-19 00:37:26,931 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-19 00:37:26,933 [ scc.git] DEBUG Check current status 2026-01-19 00:37:26,934 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-19 00:37:26,936 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2026-01-19 00:37:26,936 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-19 00:37:26,975 [ scc.config] DEBUG Found remote.origin.url 2026-01-19 00:37:27,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2026-01-19 00:37:27,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-19 00:37:28,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-19 00:37:28,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-19 00:37:29,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-19 00:37:29,138 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:37:29,177 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:37:29,178 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-01-19 00:37:29,178 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-19 00:37:29,180 [ scc.git] DEBUG Check current status 2026-01-19 00:37:29,180 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-19 00:37:29,182 [ scc.git] DEBUG bdfeb5e bump sphinx version 2026-01-19 00:37:29,182 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-19 00:37:29,221 [ scc.config] DEBUG Found remote.origin.url 2026-01-19 00:37:29,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2026-01-19 00:37:30,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-19 00:37:30,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-19 00:37:30,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-19 00:37:31,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-19 00:37:31,403 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:37:31,443 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:37:31,444 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-01-19 00:37:31,444 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-19 00:37:31,446 [ scc.git] DEBUG Check current status 2026-01-19 00:37:31,446 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-19 00:37:31,448 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2026-01-19 00:37:31,448 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-19 00:37:31,487 [ scc.config] DEBUG Found remote.origin.url 2026-01-19 00:37:31,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2026-01-19 00:37:32,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-19 00:37:32,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-19 00:37:33,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-19 00:37:33,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-19 00:37:33,638 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:37:33,677 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:37:33,677 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-01-19 00:37:33,677 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-19 00:37:33,679 [ scc.git] DEBUG Check current status 2026-01-19 00:37:33,679 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-19 00:37:33,682 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2026-01-19 00:37:33,682 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-19 00:37:33,721 [ scc.config] DEBUG Found remote.origin.url 2026-01-19 00:37:34,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-01-19 00:37:34,067 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-01-19 00:37:34,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2026-01-19 00:37:34,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-19 00:37:35,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-19 00:37:35,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-19 00:37:36,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-19 00:37:36,090 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:37:36,130 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:37:36,130 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-01-19 00:37:36,130 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-19 00:37:36,132 [ scc.git] DEBUG Check current status 2026-01-19 00:37:36,133 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-19 00:37:36,135 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2026-01-19 00:37:36,135 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-19 00:37:36,174 [ scc.config] DEBUG Found remote.origin.url 2026-01-19 00:37:36,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2026-01-19 00:37:37,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-19 00:37:37,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-19 00:37:37,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-19 00:37:38,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-19 00:37:38,309 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:37:38,348 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:37:38,348 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-01-19 00:37:38,348 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-19 00:37:38,350 [ scc.git] DEBUG Check current status 2026-01-19 00:37:38,350 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-19 00:37:38,352 [ scc.git] DEBUG 160d894 Fix display of code 2026-01-19 00:37:38,353 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-19 00:37:38,392 [ scc.config] DEBUG Found remote.origin.url 2026-01-19 00:37:38,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2026-01-19 00:37:39,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-19 00:37:39,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-19 00:37:40,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-19 00:37:40,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-19 00:37:40,534 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:37:40,573 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:37:40,574 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-01-19 00:37:40,574 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-19 00:37:40,576 [ scc.git] DEBUG Check current status 2026-01-19 00:37:40,576 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-19 00:37:40,578 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-01-19 00:37:40,579 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-19 00:37:40,620 [ scc.config] DEBUG Found remote.origin.url 2026-01-19 00:37:40,620 [ scc.git] DEBUG Repository configuration: base-branch: main 2026-01-19 00:37:41,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2026-01-19 00:37:41,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-19 00:37:41,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-19 00:37:42,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-19 00:37:42,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-19 00:37:42,719 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:37:42,758 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:37:42,758 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-01-19 00:37:42,759 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-19 00:37:42,761 [ scc.git] DEBUG Check current status 2026-01-19 00:37:42,761 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-19 00:37:42,763 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2026-01-19 00:37:42,764 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-19 00:37:42,802 [ scc.config] DEBUG Found remote.origin.url 2026-01-19 00:37:43,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-01-19 00:37:43,144 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-01-19 00:37:43,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2026-01-19 00:37:43,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-19 00:37:44,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-19 00:37:44,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-19 00:37:45,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-19 00:37:45,184 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:37:45,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:37:45,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-01-19 00:37:45,224 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-19 00:37:45,227 [ scc.git] DEBUG Check current status 2026-01-19 00:37:45,227 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-19 00:37:45,229 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2026-01-19 00:37:45,229 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-19 00:37:45,269 [ scc.config] DEBUG Found remote.origin.url 2026-01-19 00:37:45,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-01-19 00:37:45,635 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-01-19 00:37:45,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2026-01-19 00:37:46,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-19 00:37:46,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-19 00:37:47,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-19 00:37:47,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-19 00:37:47,581 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:37:47,619 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:37:47,619 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-01-19 00:37:47,619 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-19 00:37:47,622 [ scc.git] DEBUG Check current status 2026-01-19 00:37:47,622 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-19 00:37:47,624 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2026-01-19 00:37:47,624 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-19 00:37:47,663 [ scc.config] DEBUG Found remote.origin.url 2026-01-19 00:37:48,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2026-01-19 00:37:48,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-19 00:37:49,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-19 00:37:49,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-19 00:37:49,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-19 00:37:49,811 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:37:49,848 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:37:49,848 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-01-19 00:37:49,849 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-01-19 00:37:49,851 [ scc.git] DEBUG Check current status 2026-01-19 00:37:49,851 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-19 00:37:49,853 [ scc.git] DEBUG fb91f15 Merge pull request #231 from jburel/changelog2ghrelease 2026-01-19 00:37:49,853 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-19 00:37:49,892 [ scc.config] DEBUG Found remote.origin.url 2026-01-19 00:37:49,892 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-01-19 00:37:50,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-01-19 00:37:50,234 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-01-19 00:37:50,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2026-01-19 00:37:51,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-01-19 00:37:51,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-01-19 00:37:51,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-01-19 00:37:52,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-01-19 00:37:52,289 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:37:52,328 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:37:52,328 [ scc.git] DEBUG Resetting... 2026-01-19 00:37:52,328 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-01-19 00:37:52,336 [ scc.git] DEBUG HEAD is now at 097de6d merge master -Dorg -Snone 2026-01-19 00:37:52,336 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-01-19 00:37:52,387 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2026-01-19 00:37:52,402 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2026-01-19 00:37:52,432 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-01-19 00:37:52,450 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-01-19 00:37:52,464 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2026-01-19 00:37:52,485 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2026-01-19 00:37:52,499 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2026-01-19 00:37:52,510 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2026-01-19 00:37:52,534 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-01-19 00:37:52,537 [ scc.git] DEBUG Check current status 2026-01-19 00:37:52,537 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-01-19 00:37:52,539 [ scc.git] DEBUG 097de6d merge master -Dorg -Snone 2026-01-19 00:37:52,539 [ scc.git] DEBUG Calling 'git submodule status' 2026-01-19 00:37:52,581 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-01-19 00:37:52,584 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-01-19 00:37:52,587 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-01-19 00:37:52,590 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-01-19 00:37:52,593 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2026-01-19 00:37:52,595 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-01-19 00:37:52,598 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-01-19 00:37:52,601 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2026-01-19 00:37:52,604 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-01-19 00:37:52,607 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-01-19 00:37:52,609 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-01-19 00:37:52,612 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-01-19 00:37:52,615 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-01-19 00:37:52,618 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-01-19 00:37:52,621 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-01-19 00:37:52,623 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-01-19 00:37:52,626 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-01-19 00:37:52,628 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-01-19 00:37:52,631 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-01-19 00:37:52,633 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-01-19 00:37:52,636 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-01-19 00:37:52,639 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2026-01-19 00:37:52,640 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-01-19 00:37:52,640 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-01-19 00:37:52,640 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-01-19 00:37:52,640 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-01-19 00:37:52,640 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-01-19 00:37:52,640 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-01-19 00:37:52,640 [ scc.repo] DEBUG ## PRs found: 2026-01-19 00:37:52,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-01-19 00:37:53,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-01-19 00:37:53,497 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:37:54,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2026-01-19 00:37:54,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:37:55,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2026-01-19 00:37:55,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:37:55,478 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-01-19 00:37:56,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-01-19 00:37:56,011 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:37:56,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2026-01-19 00:37:56,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:37:57,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2026-01-19 00:37:57,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:37:57,926 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-01-19 00:37:58,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-01-19 00:37:58,457 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:37:59,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2026-01-19 00:37:59,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:37:59,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2026-01-19 00:38:00,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:38:00,401 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-01-19 00:38:00,401 [ scc.repo] DEBUG ## Branches found: 2026-01-19 00:38:00,401 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:38:00,401 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:38:00,404 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-19 00:38:00,406 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-19 00:38:00,406 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-19 00:38:00,409 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-19 00:38:00,413 [ scc.git] DEBUG Already up to date. 2026-01-19 00:38:00,413 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-01-19 00:38:00,696 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-01-19 00:38:00,696 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-01-19 00:38:00,700 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-01-19 00:38:00,954 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-01-19 00:38:00,954 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-01-19 00:38:00,959 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-01-19 00:38:01,212 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-01-19 00:38:01,212 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-01-19 00:38:01,216 [ scc.git] DEBUG ## Unique users: [] 2026-01-19 00:38:01,216 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:38:01,216 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:38:01,218 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-01-19 00:38:01,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:38:01,223 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-01-19 00:38:01,225 [ scc.git] DEBUG Already up to date. 2026-01-19 00:38:01,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:38:01,363 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-01-19 00:38:01,366 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:38:01,368 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-01-19 00:38:01,371 [ scc.git] DEBUG Already up to date. 2026-01-19 00:38:01,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:38:01,922 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-01-19 00:38:01,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:38:01,927 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-01-19 00:38:01,930 [ scc.git] DEBUG Already up to date. 2026-01-19 00:38:02,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:38:02,321 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-19 00:38:02,370 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:38:02,370 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:38:02,372 [ scc.repo] DEBUG ## PRs found: 2026-01-19 00:38:02,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2026-01-19 00:38:02,740 [ scc.repo] DEBUG ## Branches found: 2026-01-19 00:38:02,740 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-01-19 00:38:02,740 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:38:02,740 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:38:02,742 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-19 00:38:02,744 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-19 00:38:02,745 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-19 00:38:02,747 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-19 00:38:02,750 [ scc.git] DEBUG Already up to date. 2026-01-19 00:38:02,750 [ scc.git] DEBUG ## Unique users: [] 2026-01-19 00:38:02,750 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:38:02,750 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:38:02,752 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-19 00:38:02,790 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:38:02,790 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:38:02,792 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:38:02,827 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-19 00:38:02,830 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcc43b32f10> has no local changes 2026-01-19 00:38:02,830 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#24 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/)' 2026-01-19 00:38:02,836 [ scc.git] DEBUG [detached HEAD 74c8523] merge master -Dorg -Ssuccess-only 2026-01-19 00:38:02,837 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:38:02,837 [ scc.repo] DEBUG ## PRs found: 2026-01-19 00:38:03,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2026-01-19 00:38:03,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2026-01-19 00:38:03,868 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:38:04,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2026-01-19 00:38:04,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:38:05,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:38:05,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2026-01-19 00:38:06,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:38:06,254 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-19 00:38:07,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2026-01-19 00:38:07,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2026-01-19 00:38:07,572 [ scc.repo] DEBUG ## Branches found: 2026-01-19 00:38:07,572 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-01-19 00:38:07,572 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:38:07,572 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:38:07,575 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-19 00:38:07,577 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-19 00:38:07,577 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-19 00:38:07,579 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-19 00:38:07,583 [ scc.git] DEBUG Already up to date. 2026-01-19 00:38:07,583 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2026-01-19 00:38:07,853 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2026-01-19 00:38:07,854 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2026-01-19 00:38:07,857 [ scc.git] DEBUG ## Unique users: [] 2026-01-19 00:38:07,857 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:38:07,857 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:38:07,859 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-01-19 00:38:07,861 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:38:07,864 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-01-19 00:38:07,870 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:38:07,873 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-01-19 00:38:07,873 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-19 00:38:08,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:38:08,023 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-19 00:38:08,061 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:38:08,061 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:38:08,064 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:38:08,100 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-19 00:38:08,103 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcc43b92090> has no local changes 2026-01-19 00:38:08,104 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#24 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/)' 2026-01-19 00:38:08,109 [ scc.git] DEBUG [detached HEAD b0ed8c0] merge master -Dorg -Ssuccess-only 2026-01-19 00:38:08,109 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:38:08,109 [ scc.repo] DEBUG ## PRs found: 2026-01-19 00:38:08,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2026-01-19 00:38:09,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2026-01-19 00:38:09,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2026-01-19 00:38:10,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None 2026-01-19 00:38:10,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:38:11,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:38:11,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None 2026-01-19 00:38:11,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:38:11,905 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2026-01-19 00:38:12,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2026-01-19 00:38:12,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2026-01-19 00:38:12,865 [ scc.repo] DEBUG ## Branches found: 2026-01-19 00:38:12,865 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-01-19 00:38:12,865 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:38:12,865 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:38:12,868 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-19 00:38:12,870 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-19 00:38:12,870 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-19 00:38:12,873 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-19 00:38:12,880 [ scc.git] DEBUG Updating ce6e13c..68b7303 2026-01-19 00:38:13,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2026-01-19 00:38:14,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2026-01-19 00:38:15,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2026-01-19 00:38:15,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2026-01-19 00:38:15,928 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2026-01-19 00:38:16,194 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2026-01-19 00:38:16,194 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2026-01-19 00:38:16,198 [ scc.git] DEBUG ## Unique users: [] 2026-01-19 00:38:16,199 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:38:16,199 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:38:16,201 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-01-19 00:38:16,204 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:38:16,206 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-01-19 00:38:16,214 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2026-01-19 00:38:16,215 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:38:16,218 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2026-01-19 00:38:16,218 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2026-01-19 00:38:16,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:38:16,363 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-19 00:38:16,400 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:38:16,400 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:38:16,402 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:38:16,439 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-19 00:38:16,442 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcc43c1fa10> has no local changes 2026-01-19 00:38:16,442 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#24 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/)' 2026-01-19 00:38:16,447 [ scc.git] DEBUG [detached HEAD c72f9f6] merge master -Dorg -Ssuccess-only 2026-01-19 00:38:16,448 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:38:16,448 [ scc.repo] DEBUG ## PRs found: 2026-01-19 00:38:17,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2026-01-19 00:38:18,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/187 HTTP/1.1" 200 None 2026-01-19 00:38:18,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/187/comments HTTP/1.1" 200 None 2026-01-19 00:38:19,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c5b383c41a80f3584b709a4fa048d7d16d5ff16a HTTP/1.1" 200 None 2026-01-19 00:38:19,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c5b383c41a80f3584b709a4fa048d7d16d5ff16a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:38:20,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c5b383c41a80f3584b709a4fa048d7d16d5ff16a/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:38:20,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c5b383c41a80f3584b709a4fa048d7d16d5ff16a HTTP/1.1" 200 None 2026-01-19 00:38:21,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/c5b383c41a80f3584b709a4fa048d7d16d5ff16a?per_page=1 HTTP/1.1" 200 None 2026-01-19 00:38:21,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c5b383c41a80f3584b709a4fa048d7d16d5ff16a HTTP/1.1" 200 None 2026-01-19 00:38:22,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c5b383c41a80f3584b709a4fa048d7d16d5ff16a/status HTTP/1.1" 200 None 2026-01-19 00:38:22,215 [ scc.repo] DEBUG - PR 187 dominikl 'Fix target-by-name option' 2026-01-19 00:38:22,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/186 HTTP/1.1" 200 None 2026-01-19 00:38:23,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2 HTTP/1.1" 200 None 2026-01-19 00:38:23,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:38:24,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:38:24,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2 HTTP/1.1" 200 None 2026-01-19 00:38:25,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2?per_page=1 HTTP/1.1" 200 None 2026-01-19 00:38:25,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2 HTTP/1.1" 200 None 2026-01-19 00:38:26,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2/status HTTP/1.1" 200 None 2026-01-19 00:38:26,112 [ scc.repo] DEBUG - PR 186 jburel 'Create release from tag' 2026-01-19 00:38:26,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2026-01-19 00:38:27,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2026-01-19 00:38:27,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-01-19 00:38:28,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:38:28,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:38:28,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-01-19 00:38:29,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None 2026-01-19 00:38:29,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-01-19 00:38:30,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None 2026-01-19 00:38:30,327 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-01-19 00:38:30,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2026-01-19 00:38:31,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2026-01-19 00:38:31,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2026-01-19 00:38:32,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:38:32,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:38:33,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2026-01-19 00:38:33,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/b1ec9c408dd417886a980e3368c0d82bfefe491d?per_page=1 HTTP/1.1" 200 None 2026-01-19 00:38:34,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2026-01-19 00:38:34,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/status HTTP/1.1" 200 None 2026-01-19 00:38:34,599 [ scc.repo] DEBUG - PR 181 will-moore 'Add labels support for import' 2026-01-19 00:38:35,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2026-01-19 00:38:35,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2026-01-19 00:38:36,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2026-01-19 00:38:36,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:38:37,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:38:37,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2026-01-19 00:38:38,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bb180dbb97ddc67cd2cf655d56058ba7da765769?per_page=1 HTTP/1.1" 200 None 2026-01-19 00:38:38,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2026-01-19 00:38:39,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/status HTTP/1.1" 200 None 2026-01-19 00:38:39,083 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-01-19 00:38:39,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2026-01-19 00:38:40,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2026-01-19 00:38:40,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-01-19 00:38:41,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:38:41,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:38:42,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-01-19 00:38:42,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2026-01-19 00:38:42,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-01-19 00:38:43,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2026-01-19 00:38:43,450 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2026-01-19 00:38:43,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None 2026-01-19 00:38:44,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None 2026-01-19 00:38:44,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/34b94cfddfc81989bb9e3fcd54cfded2ae58cf9f HTTP/1.1" 200 None 2026-01-19 00:38:45,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/34b94cfddfc81989bb9e3fcd54cfded2ae58cf9f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:38:45,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/34b94cfddfc81989bb9e3fcd54cfded2ae58cf9f/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:38:46,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2026-01-19 00:38:46,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/169 HTTP/1.1" 200 None 2026-01-19 00:38:47,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2026-01-19 00:38:47,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2026-01-19 00:38:48,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2026-01-19 00:38:48,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2026-01-19 00:38:49,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2026-01-19 00:38:49,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2026-01-19 00:38:50,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2026-01-19 00:38:50,349 [ scc.repo] DEBUG ## Branches found: 2026-01-19 00:38:50,349 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-01-19 00:38:50,349 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:38:50,349 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:38:50,352 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-19 00:38:50,354 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-19 00:38:50,354 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-19 00:38:50,357 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-19 00:38:50,368 [ scc.git] DEBUG Updating 11d3587..37ea700 2026-01-19 00:38:51,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2026-01-19 00:38:51,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2026-01-19 00:38:52,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2026-01-19 00:38:53,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2026-01-19 00:38:54,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2026-01-19 00:38:54,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2026-01-19 00:38:55,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2026-01-19 00:38:56,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2026-01-19 00:38:56,098 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2026-01-19 00:38:56,372 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-01-19 00:38:56,372 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2026-01-19 00:38:56,376 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2026-01-19 00:38:56,627 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-01-19 00:38:56,627 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2026-01-19 00:38:56,631 [ scc.git] DEBUG Calling 'git fetch origin pull/181/head' 2026-01-19 00:38:56,889 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-01-19 00:38:56,889 [ scc.git] DEBUG * branch refs/pull/181/head -> FETCH_HEAD 2026-01-19 00:38:56,893 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2026-01-19 00:38:57,152 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-01-19 00:38:57,152 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2026-01-19 00:38:57,156 [ scc.git] DEBUG Calling 'git fetch origin pull/186/head' 2026-01-19 00:38:57,411 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-01-19 00:38:57,411 [ scc.git] DEBUG * branch refs/pull/186/head -> FETCH_HEAD 2026-01-19 00:38:57,415 [ scc.git] DEBUG Calling 'git fetch origin pull/187/head' 2026-01-19 00:38:57,673 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-01-19 00:38:57,673 [ scc.git] DEBUG * branch refs/pull/187/head -> FETCH_HEAD 2026-01-19 00:38:57,676 [ scc.git] DEBUG ## Unique users: [] 2026-01-19 00:38:57,676 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:38:57,676 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:38:57,679 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-01-19 00:38:57,682 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:38:57,684 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-01-19 00:38:57,693 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:38:57,696 [ scc.git] DEBUG README.rst | 14 ++ 2026-01-19 00:38:57,697 [ scc.git] DEBUG src/omero_zarr/cli.py | 66 +++++---- 2026-01-19 00:38:57,697 [ scc.git] DEBUG src/omero_zarr/kvp_tables.py | 82 +++++++++++ 2026-01-19 00:38:57,697 [ scc.git] DEBUG src/omero_zarr/masks.py | 46 ++++-- 2026-01-19 00:38:57,697 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 51 +++++-- 2026-01-19 00:38:57,697 [ scc.git] DEBUG src/omero_zarr/util.py | 49 ++++++- 2026-01-19 00:38:57,697 [ scc.git] DEBUG test/integration/clitest/test_export.py | 251 +++++++++++++++++++++++--------- 2026-01-19 00:38:57,697 [ scc.git] DEBUG 7 files changed, 443 insertions(+), 116 deletions(-) 2026-01-19 00:38:57,697 [ scc.git] DEBUG create mode 100644 src/omero_zarr/kvp_tables.py 2026-01-19 00:38:57,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:38:57,835 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bb180dbb97ddc67cd2cf655d56058ba7da765769' 2026-01-19 00:38:57,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:38:57,841 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) bb180dbb97ddc67cd2cf655d56058ba7da765769' 2026-01-19 00:38:57,850 [ scc.git] DEBUG Auto-merging CHANGELOG.md 2026-01-19 00:38:57,850 [ scc.git] DEBUG CONFLICT (content): Merge conflict in CHANGELOG.md 2026-01-19 00:38:57,850 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-01-19 00:38:57,850 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-01-19 00:38:57,850 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-01-19 00:38:57,850 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-01-19 00:38:57,851 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-01-19 00:38:57,851 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-01-19 00:38:57,853 [ scc.git] DEBUG Calling 'git reset --hard feb899b8387eee1b61db1aefbebd41f6c19937a2' 2026-01-19 00:38:57,858 [ scc.git] DEBUG HEAD is now at feb899b merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) 2026-01-19 00:38:58,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:38:58,240 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b bb180dbb97ddc67cd2cf655d56058ba7da765769' 2026-01-19 00:38:58,243 [ scc.git] DEBUG Calling 'git diff --name-only f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2026-01-19 00:38:58,245 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#24](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/consoleText) for more details. Possible conflicts: - PR #174 will-moore 'Skip wells' - src/omero_zarr/masks.py - test/integration/clitest/test_export.py - Upstream changes - CHANGELOG.md --conflicts 2026-01-19 00:38:58,247 [ scc.config] DEBUG Found github.token 2026-01-19 00:38:58,247 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2026-01-19 00:38:58,247 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b1ec9c408dd417886a980e3368c0d82bfefe491d' 2026-01-19 00:38:58,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:38:58,252 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 181 (Add labels support for import) b1ec9c408dd417886a980e3368c0d82bfefe491d' 2026-01-19 00:38:58,261 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-01-19 00:38:58,261 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:38:58,265 [ scc.git] DEBUG src/omero_zarr/cli.py | 4 + 2026-01-19 00:38:58,265 [ scc.git] DEBUG src/omero_zarr/import_labels.py | 196 ++++++++++++++++++++++++++++++++ 2026-01-19 00:38:58,265 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 7 ++ 2026-01-19 00:38:58,265 [ scc.git] DEBUG test/integration/clitest/test_import.py | 19 ++++ 2026-01-19 00:38:58,265 [ scc.git] DEBUG 4 files changed, 226 insertions(+) 2026-01-19 00:38:58,265 [ scc.git] DEBUG create mode 100644 src/omero_zarr/import_labels.py 2026-01-19 00:38:58,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:38:58,799 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-01-19 00:38:58,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:38:58,805 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-01-19 00:38:58,814 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-01-19 00:38:58,814 [ scc.git] DEBUG Auto-merging src/omero_zarr/import_labels.py 2026-01-19 00:38:58,814 [ scc.git] DEBUG CONFLICT (add/add): Merge conflict in src/omero_zarr/import_labels.py 2026-01-19 00:38:58,814 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-01-19 00:38:58,814 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-01-19 00:38:58,814 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-01-19 00:38:58,817 [ scc.git] DEBUG Calling 'git reset --hard 471de74c5c9c116f17fc601df7d9b7cc7c33361c' 2026-01-19 00:38:58,821 [ scc.git] DEBUG HEAD is now at 471de74 merge master -Dorg -Ssuccess-only: PR 181 (Add labels support for import) 2026-01-19 00:38:59,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:38:59,188 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-01-19 00:38:59,190 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2026-01-19 00:38:59,193 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#24](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/consoleText) for more details. Possible conflicts: - PR #181 will-moore 'Add labels support for import' - src/omero_zarr/import_labels.py --conflicts 2026-01-19 00:38:59,195 [ scc.config] DEBUG Found github.token 2026-01-19 00:38:59,195 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2026-01-19 00:38:59,195 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2' 2026-01-19 00:38:59,198 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:38:59,200 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 186 (Create release from tag) e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2' 2026-01-19 00:38:59,207 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:38:59,210 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 7 ++++++- 2026-01-19 00:38:59,210 [ scc.git] DEBUG CHANGELOG.md | 41 -------------------------------------- 2026-01-19 00:38:59,210 [ scc.git] DEBUG 2 files changed, 6 insertions(+), 42 deletions(-) 2026-01-19 00:38:59,210 [ scc.git] DEBUG delete mode 100644 CHANGELOG.md 2026-01-19 00:38:59,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:38:59,584 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c5b383c41a80f3584b709a4fa048d7d16d5ff16a' 2026-01-19 00:38:59,588 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:38:59,590 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 187 (Fix target-by-name option) c5b383c41a80f3584b709a4fa048d7d16d5ff16a' 2026-01-19 00:38:59,598 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-01-19 00:38:59,599 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:38:59,602 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 5 +++-- 2026-01-19 00:38:59,602 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 2 deletions(-) 2026-01-19 00:38:59,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:38:59,975 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-19 00:39:00,014 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:39:00,014 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:39:00,016 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:39:00,052 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-19 00:39:00,055 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcc43b32d90> has no local changes 2026-01-19 00:39:00,055 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..37ea700 Previously merged: - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 174 will-moore 'Skip wells' - PR 181 will-moore 'Add labels support for import' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' Conflicting PRs (not included): - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#24 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/)' 2026-01-19 00:39:00,060 [ scc.git] DEBUG [detached HEAD 9d31db1] merge master -Dorg -Ssuccess-only 2026-01-19 00:39:00,061 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:39:00,061 [ scc.repo] DEBUG ## PRs found: 2026-01-19 00:39:00,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2026-01-19 00:39:01,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/662 HTTP/1.1" 200 None 2026-01-19 00:39:01,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/661 HTTP/1.1" 200 None 2026-01-19 00:39:01,758 [ scc.repo] DEBUG # ... Include label: include 2026-01-19 00:39:02,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0b1fadc410600a85e5a6600540f2ce98a28ae208 HTTP/1.1" 200 None 2026-01-19 00:39:02,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0b1fadc410600a85e5a6600540f2ce98a28ae208/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:39:03,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0b1fadc410600a85e5a6600540f2ce98a28ae208/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:39:03,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0b1fadc410600a85e5a6600540f2ce98a28ae208 HTTP/1.1" 200 None 2026-01-19 00:39:04,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/0b1fadc410600a85e5a6600540f2ce98a28ae208?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:39:04,217 [ scc.repo] DEBUG - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-01-19 00:39:04,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/659 HTTP/1.1" 200 None 2026-01-19 00:39:05,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/659/comments HTTP/1.1" 200 None 2026-01-19 00:39:06,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/50025be98eaab5a5c454b282088ea8fcd64e2ee3 HTTP/1.1" 200 None 2026-01-19 00:39:06,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/50025be98eaab5a5c454b282088ea8fcd64e2ee3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:39:07,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/50025be98eaab5a5c454b282088ea8fcd64e2ee3/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:39:07,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/50025be98eaab5a5c454b282088ea8fcd64e2ee3 HTTP/1.1" 200 None 2026-01-19 00:39:07,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/50025be98eaab5a5c454b282088ea8fcd64e2ee3?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:39:07,893 [ scc.repo] DEBUG - PR 659 will-moore 'Fix ability of export script to be installed and run without reportlab' 2026-01-19 00:39:08,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/656 HTTP/1.1" 200 None 2026-01-19 00:39:08,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c7d0108c6df89255b8875924ed52e264a72e581d HTTP/1.1" 200 None 2026-01-19 00:39:09,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c7d0108c6df89255b8875924ed52e264a72e581d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:39:09,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c7d0108c6df89255b8875924ed52e264a72e581d/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:39:10,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c7d0108c6df89255b8875924ed52e264a72e581d HTTP/1.1" 200 None 2026-01-19 00:39:10,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/c7d0108c6df89255b8875924ed52e264a72e581d?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:39:10,861 [ scc.repo] DEBUG - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-01-19 00:39:11,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/654 HTTP/1.1" 200 None 2026-01-19 00:39:11,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/654/comments HTTP/1.1" 200 None 2026-01-19 00:39:12,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e1b877b4b9b8cbb506d839dcb304a0b10df25063 HTTP/1.1" 200 None 2026-01-19 00:39:12,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e1b877b4b9b8cbb506d839dcb304a0b10df25063/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:39:13,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e1b877b4b9b8cbb506d839dcb304a0b10df25063/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:39:13,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e1b877b4b9b8cbb506d839dcb304a0b10df25063 HTTP/1.1" 200 None 2026-01-19 00:39:14,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e1b877b4b9b8cbb506d839dcb304a0b10df25063?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:39:14,227 [ scc.repo] DEBUG - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-01-19 00:39:14,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None 2026-01-19 00:39:15,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652/comments HTTP/1.1" 200 None 2026-01-19 00:39:15,202 [ scc.repo] DEBUG # ... Include label: include 2026-01-19 00:39:15,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None 2026-01-19 00:39:16,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:39:16,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:39:17,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None 2026-01-19 00:39:17,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:39:17,578 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-01-19 00:39:18,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/648 HTTP/1.1" 200 None 2026-01-19 00:39:18,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/648/comments HTTP/1.1" 200 None 2026-01-19 00:39:18,562 [ scc.repo] DEBUG # ... Include label: include 2026-01-19 00:39:19,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8b7ac78406a43da2a838a8bc7deedd4d19566827 HTTP/1.1" 200 None 2026-01-19 00:39:19,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8b7ac78406a43da2a838a8bc7deedd4d19566827/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:39:20,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8b7ac78406a43da2a838a8bc7deedd4d19566827/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:39:20,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8b7ac78406a43da2a838a8bc7deedd4d19566827 HTTP/1.1" 200 None 2026-01-19 00:39:20,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/8b7ac78406a43da2a838a8bc7deedd4d19566827?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:39:20,948 [ scc.repo] DEBUG - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-01-19 00:39:21,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2026-01-19 00:39:21,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2026-01-19 00:39:21,929 [ scc.repo] DEBUG # ... Include label: include 2026-01-19 00:39:22,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/873513165e5978a398379bd9b81114325e84a946 HTTP/1.1" 200 None 2026-01-19 00:39:23,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/873513165e5978a398379bd9b81114325e84a946/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:39:23,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/873513165e5978a398379bd9b81114325e84a946/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:39:23,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/873513165e5978a398379bd9b81114325e84a946 HTTP/1.1" 200 None 2026-01-19 00:39:24,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/873513165e5978a398379bd9b81114325e84a946?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:39:24,428 [ scc.repo] DEBUG - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' 2026-01-19 00:39:24,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/619 HTTP/1.1" 200 None 2026-01-19 00:39:24,908 [ scc.repo] DEBUG ## Branches found: 2026-01-19 00:39:24,908 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-01-19 00:39:24,908 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:39:24,908 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:39:24,911 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-19 00:39:24,913 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-19 00:39:24,914 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-19 00:39:24,917 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-19 00:39:24,952 [ scc.git] DEBUG Updating 9cc36cde..ddcf816a 2026-01-19 00:39:25,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None 2026-01-19 00:39:26,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None 2026-01-19 00:39:27,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None 2026-01-19 00:39:27,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None 2026-01-19 00:39:28,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2026-01-19 00:39:29,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2026-01-19 00:39:29,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2026-01-19 00:39:30,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2026-01-19 00:39:31,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2026-01-19 00:39:32,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2026-01-19 00:39:32,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2026-01-19 00:39:33,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2026-01-19 00:39:34,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2026-01-19 00:39:35,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2026-01-19 00:39:35,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2026-01-19 00:39:36,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2026-01-19 00:39:37,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2026-01-19 00:39:38,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2026-01-19 00:39:39,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2026-01-19 00:39:39,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2026-01-19 00:39:39,672 [ scc.git] DEBUG Calling 'git fetch origin pull/641/head' 2026-01-19 00:39:39,961 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-01-19 00:39:39,962 [ scc.git] DEBUG * branch refs/pull/641/head -> FETCH_HEAD 2026-01-19 00:39:39,965 [ scc.git] DEBUG Calling 'git fetch origin pull/648/head' 2026-01-19 00:39:40,226 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-01-19 00:39:40,226 [ scc.git] DEBUG * branch refs/pull/648/head -> FETCH_HEAD 2026-01-19 00:39:40,229 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head' 2026-01-19 00:39:40,494 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-01-19 00:39:40,494 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD 2026-01-19 00:39:40,498 [ scc.git] DEBUG Calling 'git fetch origin pull/654/head' 2026-01-19 00:39:40,753 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-01-19 00:39:40,753 [ scc.git] DEBUG * branch refs/pull/654/head -> FETCH_HEAD 2026-01-19 00:39:40,757 [ scc.git] DEBUG Calling 'git fetch origin pull/656/head' 2026-01-19 00:39:41,012 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-01-19 00:39:41,012 [ scc.git] DEBUG * branch refs/pull/656/head -> FETCH_HEAD 2026-01-19 00:39:41,016 [ scc.git] DEBUG Calling 'git fetch origin pull/659/head' 2026-01-19 00:39:41,269 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-01-19 00:39:41,269 [ scc.git] DEBUG * branch refs/pull/659/head -> FETCH_HEAD 2026-01-19 00:39:41,273 [ scc.git] DEBUG Calling 'git fetch origin pull/661/head' 2026-01-19 00:39:41,529 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-01-19 00:39:41,529 [ scc.git] DEBUG * branch refs/pull/661/head -> FETCH_HEAD 2026-01-19 00:39:41,533 [ scc.git] DEBUG ## Unique users: [] 2026-01-19 00:39:41,533 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:39:41,533 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:39:41,536 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...873513165e5978a398379bd9b81114325e84a946' 2026-01-19 00:39:41,541 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:39:41,543 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 641 (OMERO ROIs improvements : filtering visible and adding all) 873513165e5978a398379bd9b81114325e84a946' 2026-01-19 00:39:41,557 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:39:41,560 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 111 ++++++++++++++++++++++++++++++----------- 2026-01-19 00:39:41,560 [ scc.git] DEBUG 1 file changed, 83 insertions(+), 28 deletions(-) 2026-01-19 00:39:41,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:39:41,707 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b7ac78406a43da2a838a8bc7deedd4d19566827' 2026-01-19 00:39:41,714 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:39:41,716 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 648 (Add well and field label for high-content screening data, fixes #540) 8b7ac78406a43da2a838a8bc7deedd4d19566827' 2026-01-19 00:39:41,741 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-01-19 00:39:41,741 [ scc.git] DEBUG Auto-merging omero_figure/views.py 2026-01-19 00:39:41,741 [ scc.git] DEBUG Auto-merging src/index.html 2026-01-19 00:39:41,741 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2026-01-19 00:39:41,741 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2026-01-19 00:39:41,741 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2026-01-19 00:39:41,742 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:39:41,748 [ scc.git] DEBUG omero_figure/omeroutils.py | 32 +++++++++++ 2026-01-19 00:39:41,748 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 63 ++++++++++++++++++++++ 2026-01-19 00:39:41,748 [ scc.git] DEBUG omero_figure/views.py | 22 +++++++- 2026-01-19 00:39:41,748 [ scc.git] DEBUG src/index.html | 20 +++++++ 2026-01-19 00:39:41,748 [ scc.git] DEBUG src/js/models/figure_model.js | 1 + 2026-01-19 00:39:41,748 [ scc.git] DEBUG src/js/models/panel_model.js | 9 ++-- 2026-01-19 00:39:41,748 [ scc.git] DEBUG src/js/views/panel_view.js | 11 +++- 2026-01-19 00:39:41,748 [ scc.git] DEBUG src/templates/labels_form_inner.template.html | 1 + 2026-01-19 00:39:41,748 [ scc.git] DEBUG 8 files changed, 150 insertions(+), 9 deletions(-) 2026-01-19 00:39:42,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:39:42,111 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-01-19 00:39:42,119 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:39:42,122 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-01-19 00:39:42,144 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-01-19 00:39:42,144 [ scc.git] DEBUG Auto-merging src/index.html 2026-01-19 00:39:42,144 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-01-19 00:39:42,145 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:39:42,150 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++- 2026-01-19 00:39:42,150 [ scc.git] DEBUG src/index.html | 11 ++ 2026-01-19 00:39:42,150 [ scc.git] DEBUG src/js/views/figure_view.js | 1 + 2026-01-19 00:39:42,150 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-) 2026-01-19 00:39:42,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:39:42,504 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e1b877b4b9b8cbb506d839dcb304a0b10df25063' 2026-01-19 00:39:42,512 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:39:42,515 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 654 (Refresh metadata button to reload channel names, pixel sizes) e1b877b4b9b8cbb506d839dcb304a0b10df25063' 2026-01-19 00:39:42,534 [ scc.git] DEBUG Auto-merging src/index.html 2026-01-19 00:39:42,534 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2026-01-19 00:39:42,534 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-01-19 00:39:42,535 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:39:42,539 [ scc.git] DEBUG src/index.html | 5 +++ 2026-01-19 00:39:42,539 [ scc.git] DEBUG src/js/models/figure_model.js | 71 +++++++++++++++++++++++++++++++++++++++++++ 2026-01-19 00:39:42,539 [ scc.git] DEBUG src/js/views/figure_view.js | 7 +++++ 2026-01-19 00:39:42,539 [ scc.git] DEBUG 3 files changed, 83 insertions(+) 2026-01-19 00:39:42,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:39:42,918 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c7d0108c6df89255b8875924ed52e264a72e581d' 2026-01-19 00:39:42,924 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:39:42,926 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 656 (Option to add roi comment when adding ROI from OMERO) c7d0108c6df89255b8875924ed52e264a72e581d' 2026-01-19 00:39:42,940 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2026-01-19 00:39:42,940 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:39:42,944 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 3 +- 2026-01-19 00:39:42,944 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 68 +++++++++++++++++------- 2026-01-19 00:39:42,944 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 7 ++- 2026-01-19 00:39:42,944 [ scc.git] DEBUG 3 files changed, 56 insertions(+), 22 deletions(-) 2026-01-19 00:39:43,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:39:43,333 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...50025be98eaab5a5c454b282088ea8fcd64e2ee3' 2026-01-19 00:39:43,338 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:39:43,340 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 659 (Fix ability of export script to be installed and run without reportlab) 50025be98eaab5a5c454b282088ea8fcd64e2ee3' 2026-01-19 00:39:43,356 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-01-19 00:39:43,356 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:39:43,360 [ scc.git] DEBUG omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py | 3 +-- 2026-01-19 00:39:43,361 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 2 deletions(-) 2026-01-19 00:39:43,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:39:43,729 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0b1fadc410600a85e5a6600540f2ce98a28ae208' 2026-01-19 00:39:43,734 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:39:43,736 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 661 (Align to grid - check if panels are already in the grid) 0b1fadc410600a85e5a6600540f2ce98a28ae208' 2026-01-19 00:39:43,749 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2026-01-19 00:39:43,750 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:39:43,753 [ scc.git] DEBUG src/js/models/figure_model.js | 7 ++++++- 2026-01-19 00:39:43,753 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 1 deletion(-) 2026-01-19 00:39:44,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:39:44,204 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-19 00:39:44,244 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:39:44,244 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:39:44,246 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:39:44,283 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-19 00:39:44,288 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcc43c33190> has no local changes 2026-01-19 00:39:44,288 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 662 will-moore 'Export script runnable OMERO' (stage: draft) - PR 619 will-moore 'OME-Zarr support' (stage: draft) Updating 9cc36cde..ddcf816a Previously merged: - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 659 will-moore 'Fix ability of export script to be installed and run without reportlab' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' Generated by OMERO-plugins-push#24 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/)' 2026-01-19 00:39:44,294 [ scc.git] DEBUG [detached HEAD 05d1a766] merge master -Dorg -Ssuccess-only 2026-01-19 00:39:44,294 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:39:44,294 [ scc.repo] DEBUG ## PRs found: 2026-01-19 00:39:44,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2026-01-19 00:39:45,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2026-01-19 00:39:45,249 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:39:45,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2026-01-19 00:39:46,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:39:46,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:39:47,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2026-01-19 00:39:47,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:39:47,802 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-19 00:39:48,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2026-01-19 00:39:48,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2026-01-19 00:39:49,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2026-01-19 00:39:49,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:39:50,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2026-01-19 00:39:50,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:39:50,715 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2026-01-19 00:39:50,715 [ scc.repo] DEBUG ## Branches found: 2026-01-19 00:39:50,715 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-01-19 00:39:50,715 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:39:50,715 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:39:50,718 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-19 00:39:50,720 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-19 00:39:50,720 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-19 00:39:50,723 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-19 00:39:50,726 [ scc.git] DEBUG Already up to date. 2026-01-19 00:39:50,726 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2026-01-19 00:39:50,996 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-01-19 00:39:50,996 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2026-01-19 00:39:50,999 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2026-01-19 00:39:51,259 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-01-19 00:39:51,259 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2026-01-19 00:39:51,263 [ scc.git] DEBUG ## Unique users: [] 2026-01-19 00:39:51,264 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:39:51,264 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:39:51,266 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-01-19 00:39:51,269 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:39:51,271 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-01-19 00:39:51,277 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2026-01-19 00:39:51,278 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:39:51,280 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2026-01-19 00:39:51,281 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2026-01-19 00:39:51,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:39:51,453 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-01-19 00:39:51,456 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:39:51,458 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-01-19 00:39:51,464 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:39:51,467 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-01-19 00:39:51,467 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-19 00:39:51,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:39:51,860 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-19 00:39:51,898 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:39:51,898 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:39:51,900 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:39:51,935 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-19 00:39:51,938 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcc43ba70d0> has no local changes 2026-01-19 00:39:51,938 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#24 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/)' 2026-01-19 00:39:51,944 [ scc.git] DEBUG [detached HEAD 9ce9840] merge master -Dorg -Ssuccess-only 2026-01-19 00:39:51,944 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:39:51,944 [ scc.repo] DEBUG ## PRs found: 2026-01-19 00:39:52,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2026-01-19 00:39:52,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2026-01-19 00:39:53,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2026-01-19 00:39:53,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2026-01-19 00:39:53,925 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:39:54,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2026-01-19 00:39:55,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:39:55,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:39:56,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2026-01-19 00:39:56,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:39:56,531 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-01-19 00:39:57,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2026-01-19 00:39:57,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2026-01-19 00:39:57,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2026-01-19 00:39:57,979 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:39:58,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2026-01-19 00:39:59,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:39:59,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:40:00,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2026-01-19 00:40:00,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:40:00,462 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-01-19 00:40:01,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2026-01-19 00:40:01,140 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:40:01,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2026-01-19 00:40:02,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:40:02,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:40:03,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2026-01-19 00:40:03,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:40:03,602 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-01-19 00:40:04,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2026-01-19 00:40:04,102 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:40:04,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2026-01-19 00:40:05,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:40:05,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:40:06,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2026-01-19 00:40:06,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:40:06,592 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-01-19 00:40:07,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2026-01-19 00:40:07,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2026-01-19 00:40:07,534 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:40:08,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2026-01-19 00:40:08,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:40:09,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:40:09,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2026-01-19 00:40:10,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:40:10,337 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-01-19 00:40:10,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2026-01-19 00:40:10,815 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:40:11,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2026-01-19 00:40:11,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:40:12,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:40:13,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2026-01-19 00:40:13,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:40:13,434 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-01-19 00:40:13,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2026-01-19 00:40:13,931 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:40:14,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2026-01-19 00:40:15,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:40:15,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:40:16,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2026-01-19 00:40:16,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:40:16,639 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-01-19 00:40:16,639 [ scc.repo] DEBUG ## Branches found: 2026-01-19 00:40:16,639 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-01-19 00:40:16,639 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:40:16,639 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:40:16,642 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-19 00:40:16,644 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-19 00:40:16,644 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-19 00:40:16,647 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-19 00:40:16,650 [ scc.git] DEBUG Already up to date. 2026-01-19 00:40:16,650 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2026-01-19 00:40:16,923 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-01-19 00:40:16,923 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2026-01-19 00:40:16,928 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2026-01-19 00:40:17,181 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-01-19 00:40:17,181 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2026-01-19 00:40:17,185 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2026-01-19 00:40:17,443 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-01-19 00:40:17,443 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2026-01-19 00:40:17,448 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2026-01-19 00:40:17,699 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-01-19 00:40:17,699 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2026-01-19 00:40:17,703 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2026-01-19 00:40:17,962 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-01-19 00:40:17,962 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2026-01-19 00:40:17,966 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2026-01-19 00:40:18,218 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-01-19 00:40:18,218 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2026-01-19 00:40:18,223 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2026-01-19 00:40:18,480 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-01-19 00:40:18,480 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2026-01-19 00:40:18,484 [ scc.git] DEBUG ## Unique users: [] 2026-01-19 00:40:18,484 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:40:18,484 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:40:18,487 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-01-19 00:40:18,489 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:40:18,492 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-01-19 00:40:18,499 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:40:18,504 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-01-19 00:40:18,504 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-01-19 00:40:18,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:40:18,645 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-01-19 00:40:18,647 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:40:18,649 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-01-19 00:40:18,663 [ scc.git] DEBUG Auto-merging package-lock.json 2026-01-19 00:40:18,664 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:40:18,668 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2026-01-19 00:40:18,668 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2026-01-19 00:40:19,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:40:19,034 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-01-19 00:40:19,037 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:40:19,039 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-01-19 00:40:19,054 [ scc.git] DEBUG Auto-merging package-lock.json 2026-01-19 00:40:19,054 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-01-19 00:40:19,054 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-01-19 00:40:19,054 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-01-19 00:40:19,057 [ scc.git] DEBUG Calling 'git reset --hard 55665df237aadebfce1b0a2d2b5242ec21cd70ea' 2026-01-19 00:40:19,061 [ scc.git] DEBUG HEAD is now at 55665df merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2026-01-19 00:40:19,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:40:19,443 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-01-19 00:40:19,446 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-01-19 00:40:19,449 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#24](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2026-01-19 00:40:19,451 [ scc.config] DEBUG Found github.token 2026-01-19 00:40:19,451 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2026-01-19 00:40:19,451 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-01-19 00:40:19,454 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:40:19,456 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-01-19 00:40:19,471 [ scc.git] DEBUG Auto-merging package-lock.json 2026-01-19 00:40:19,472 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:40:19,476 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2026-01-19 00:40:19,476 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2026-01-19 00:40:19,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:40:19,834 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-01-19 00:40:19,837 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:40:19,839 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-01-19 00:40:19,855 [ scc.git] DEBUG Auto-merging package-lock.json 2026-01-19 00:40:19,856 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:40:19,860 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-01-19 00:40:19,860 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-01-19 00:40:20,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:40:20,224 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-01-19 00:40:20,227 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:40:20,229 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-01-19 00:40:20,245 [ scc.git] DEBUG Auto-merging package-lock.json 2026-01-19 00:40:20,245 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-01-19 00:40:20,245 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-01-19 00:40:20,245 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-01-19 00:40:20,248 [ scc.git] DEBUG Calling 'git reset --hard 5fd3bd287203fb79b36fbac8f27108c2d260e16c' 2026-01-19 00:40:20,253 [ scc.git] DEBUG HEAD is now at 5fd3bd2 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-01-19 00:40:20,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:40:20,617 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-01-19 00:40:20,620 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-01-19 00:40:20,623 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#24](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2026-01-19 00:40:20,625 [ scc.config] DEBUG Found github.token 2026-01-19 00:40:20,625 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2026-01-19 00:40:20,625 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-01-19 00:40:20,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:40:20,630 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-01-19 00:40:20,648 [ scc.git] DEBUG Auto-merging package-lock.json 2026-01-19 00:40:20,648 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-01-19 00:40:20,648 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-01-19 00:40:20,649 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-01-19 00:40:20,651 [ scc.git] DEBUG Calling 'git reset --hard 5fd3bd287203fb79b36fbac8f27108c2d260e16c' 2026-01-19 00:40:20,655 [ scc.git] DEBUG HEAD is now at 5fd3bd2 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-01-19 00:40:21,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:40:21,159 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-01-19 00:40:21,161 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-01-19 00:40:21,164 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#24](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2026-01-19 00:40:21,166 [ scc.config] DEBUG Found github.token 2026-01-19 00:40:21,166 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2026-01-19 00:40:21,166 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-19 00:40:21,206 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:40:21,206 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:40:21,209 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:40:21,247 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-19 00:40:21,251 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcc43ba6050> has no local changes 2026-01-19 00:40:21,251 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#24 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/)' 2026-01-19 00:40:21,257 [ scc.git] DEBUG [detached HEAD 8723456] merge master -Dorg -Ssuccess-only 2026-01-19 00:40:21,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:40:21,257 [ scc.repo] DEBUG ## PRs found: 2026-01-19 00:40:21,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2026-01-19 00:40:22,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/513 HTTP/1.1" 200 None 2026-01-19 00:40:22,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None 2026-01-19 00:40:23,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:40:23,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:40:24,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None 2026-01-19 00:40:24,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/aebb6273b9267a47a47363208fa97dc9c638a688?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:40:24,711 [ scc.repo] DEBUG - PR 513 jburel 'Bump Python version' 2026-01-19 00:40:25,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/512 HTTP/1.1" 200 None 2026-01-19 00:40:25,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None 2026-01-19 00:40:26,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:40:26,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:40:27,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None 2026-01-19 00:40:27,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/ec8f9e716c574a715529da53dff61ef178020c43?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:40:27,567 [ scc.repo] DEBUG - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-01-19 00:40:28,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511 HTTP/1.1" 200 None 2026-01-19 00:40:28,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None 2026-01-19 00:40:29,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2026-01-19 00:40:29,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2026-01-19 00:40:30,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None 2026-01-19 00:40:30,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None 2026-01-19 00:40:30,688 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:40:31,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2026-01-19 00:40:31,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:40:32,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:40:32,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2026-01-19 00:40:33,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:40:33,302 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2026-01-19 00:40:33,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2026-01-19 00:40:33,801 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:40:34,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2026-01-19 00:40:34,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:40:35,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:40:36,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2026-01-19 00:40:36,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:40:36,470 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2026-01-19 00:40:36,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2026-01-19 00:40:37,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2026-01-19 00:40:37,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2026-01-19 00:40:38,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2026-01-19 00:40:38,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2026-01-19 00:40:39,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:40:39,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2026-01-19 00:40:40,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:40:40,257 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2026-01-19 00:40:40,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2026-01-19 00:40:41,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2026-01-19 00:40:41,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2026-01-19 00:40:42,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:40:42,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2026-01-19 00:40:43,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:40:43,122 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2026-01-19 00:40:43,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2026-01-19 00:40:44,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2026-01-19 00:40:44,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2026-01-19 00:40:45,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:40:45,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2026-01-19 00:40:46,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:40:46,200 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2026-01-19 00:40:46,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2026-01-19 00:40:47,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2026-01-19 00:40:47,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None 2026-01-19 00:40:48,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:40:48,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:40:48,569 [ scc.repo] DEBUG ## Branches found: 2026-01-19 00:40:48,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-01-19 00:40:48,570 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:40:48,570 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:40:48,572 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-19 00:40:48,575 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-19 00:40:48,575 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-19 00:40:48,577 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-19 00:40:48,584 [ scc.git] DEBUG Updating 7a798ce..5e2de43 2026-01-19 00:40:49,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2026-01-19 00:40:49,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2026-01-19 00:40:49,954 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2026-01-19 00:40:50,239 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-01-19 00:40:50,239 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2026-01-19 00:40:50,243 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2026-01-19 00:40:50,498 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-01-19 00:40:50,498 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2026-01-19 00:40:50,502 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2026-01-19 00:40:50,764 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-01-19 00:40:50,764 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2026-01-19 00:40:50,768 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2026-01-19 00:40:51,022 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-01-19 00:40:51,022 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2026-01-19 00:40:51,026 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head' 2026-01-19 00:40:51,284 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-01-19 00:40:51,284 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD 2026-01-19 00:40:51,288 [ scc.git] DEBUG Calling 'git fetch origin pull/512/head' 2026-01-19 00:40:51,543 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-01-19 00:40:51,543 [ scc.git] DEBUG * branch refs/pull/512/head -> FETCH_HEAD 2026-01-19 00:40:51,547 [ scc.git] DEBUG Calling 'git fetch origin pull/513/head' 2026-01-19 00:40:51,801 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-01-19 00:40:51,801 [ scc.git] DEBUG * branch refs/pull/513/head -> FETCH_HEAD 2026-01-19 00:40:51,805 [ scc.git] DEBUG ## Unique users: [] 2026-01-19 00:40:51,805 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:40:51,805 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:40:51,808 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-01-19 00:40:51,811 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:40:51,813 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-01-19 00:40:51,824 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2026-01-19 00:40:51,824 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2026-01-19 00:40:51,824 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:40:51,828 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2026-01-19 00:40:51,828 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2026-01-19 00:40:51,828 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2026-01-19 00:40:51,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:40:51,981 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2026-01-19 00:40:51,985 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:40:51,987 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2026-01-19 00:40:52,002 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2026-01-19 00:40:52,002 [ scc.git] DEBUG Auto-merging src/app/context.js 2026-01-19 00:40:52,002 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2026-01-19 00:40:52,002 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2026-01-19 00:40:52,003 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:40:52,007 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2026-01-19 00:40:52,007 [ scc.git] DEBUG src/app/context.js | 6 +- 2026-01-19 00:40:52,007 [ scc.git] DEBUG src/app/header.html | 5 + 2026-01-19 00:40:52,007 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2026-01-19 00:40:52,007 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2026-01-19 00:40:52,007 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2026-01-19 00:40:52,007 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2026-01-19 00:40:52,007 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2026-01-19 00:40:52,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:40:52,373 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2026-01-19 00:40:52,377 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:40:52,379 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2026-01-19 00:40:52,389 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2026-01-19 00:40:52,390 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:40:52,393 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2026-01-19 00:40:52,393 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2026-01-19 00:40:52,393 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2026-01-19 00:40:52,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:40:52,775 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2026-01-19 00:40:52,779 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:40:52,781 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2026-01-19 00:40:52,799 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:40:52,807 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2026-01-19 00:40:52,807 [ scc.git] DEBUG package.json | 2 +- 2026-01-19 00:40:52,807 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2026-01-19 00:40:53,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:40:53,172 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4' 2026-01-19 00:40:53,176 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:40:53,178 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4' 2026-01-19 00:40:53,212 [ scc.git] DEBUG Auto-merging package-lock.json 2026-01-19 00:40:53,212 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-01-19 00:40:53,212 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-01-19 00:40:53,213 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-01-19 00:40:53,216 [ scc.git] DEBUG Calling 'git reset --hard 2c588d0d107fc6153728495201409afd212a6b48' 2026-01-19 00:40:53,227 [ scc.git] DEBUG HEAD is now at 2c588d0 merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) 2026-01-19 00:40:53,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:40:53,589 [ scc.git] DEBUG Calling 'git merge-base 5e2de43ad401fb00690a79644056e0ac15fabfd5 45d08b7e29871ecff0386975c975dacd0865bcc4' 2026-01-19 00:40:53,592 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..5e2de43ad401fb00690a79644056e0ac15fabfd5' 2026-01-19 00:40:53,594 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Conflicting PR. Removed from build [OMERO-plugins-push#24](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/consoleText) for more details. Possible conflicts: - PR #499 dependabot[bot] 'Bump nanoid and mocha' - package-lock.json --conflicts 2026-01-19 00:40:53,596 [ scc.config] DEBUG Found github.token 2026-01-19 00:40:53,596 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts. 2026-01-19 00:40:53,596 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ec8f9e716c574a715529da53dff61ef178020c43' 2026-01-19 00:40:53,600 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:40:53,602 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 512 (Replace manual changelog by automated GH release step) ec8f9e716c574a715529da53dff61ef178020c43' 2026-01-19 00:40:53,617 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:40:53,619 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 5 + 2026-01-19 00:40:53,620 [ scc.git] DEBUG CHANGELOG.md | 261 ------------------------------------- 2026-01-19 00:40:53,620 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 261 deletions(-) 2026-01-19 00:40:53,620 [ scc.git] DEBUG delete mode 100644 CHANGELOG.md 2026-01-19 00:40:53,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:40:53,997 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aebb6273b9267a47a47363208fa97dc9c638a688' 2026-01-19 00:40:54,001 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:40:54,004 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 513 (Bump Python version) aebb6273b9267a47a47363208fa97dc9c638a688' 2026-01-19 00:40:54,015 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-01-19 00:40:54,015 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:40:54,018 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 4 ++-- 2026-01-19 00:40:54,018 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2026-01-19 00:40:54,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:40:54,389 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-19 00:40:54,428 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:40:54,428 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:40:54,431 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:40:54,468 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-19 00:40:54,472 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcc41a15bd0> has no local changes 2026-01-19 00:40:54,472 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..5e2de43 Previously merged: - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 513 jburel 'Bump Python version' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Generated by OMERO-plugins-push#24 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/)' 2026-01-19 00:40:54,478 [ scc.git] DEBUG [detached HEAD 9756253] merge master -Dorg -Ssuccess-only 2026-01-19 00:40:54,478 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:40:54,478 [ scc.repo] DEBUG ## PRs found: 2026-01-19 00:40:54,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2026-01-19 00:40:55,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2026-01-19 00:40:55,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2026-01-19 00:40:55,864 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:40:56,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2026-01-19 00:40:56,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:40:57,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:40:57,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2026-01-19 00:40:58,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:40:58,360 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-19 00:40:58,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2026-01-19 00:40:59,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2026-01-19 00:40:59,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:41:00,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2026-01-19 00:41:00,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:41:00,863 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-01-19 00:41:01,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2026-01-19 00:41:01,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2026-01-19 00:41:02,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2026-01-19 00:41:02,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:41:03,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2026-01-19 00:41:03,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:41:03,864 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2026-01-19 00:41:03,864 [ scc.repo] DEBUG ## Branches found: 2026-01-19 00:41:03,864 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-01-19 00:41:03,865 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:41:03,865 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:03,867 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-19 00:41:03,869 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-19 00:41:03,869 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-19 00:41:03,872 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-19 00:41:03,875 [ scc.git] DEBUG Already up to date. 2026-01-19 00:41:03,875 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-01-19 00:41:04,141 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-01-19 00:41:04,141 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-01-19 00:41:04,145 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2026-01-19 00:41:04,400 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-01-19 00:41:04,400 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2026-01-19 00:41:04,404 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2026-01-19 00:41:04,660 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-01-19 00:41:04,660 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2026-01-19 00:41:04,663 [ scc.git] DEBUG ## Unique users: [] 2026-01-19 00:41:04,664 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:41:04,664 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:04,666 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-01-19 00:41:04,669 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:04,671 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-01-19 00:41:04,679 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:41:04,682 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2026-01-19 00:41:04,682 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2026-01-19 00:41:04,682 [ scc.git] DEBUG requirements.txt | 2 +- 2026-01-19 00:41:04,682 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2026-01-19 00:41:04,682 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2026-01-19 00:41:04,682 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2026-01-19 00:41:04,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:41:04,831 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-01-19 00:41:04,835 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:04,837 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-01-19 00:41:04,845 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:41:04,847 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-01-19 00:41:04,847 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-19 00:41:05,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:41:05,236 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-01-19 00:41:05,239 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:05,241 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-01-19 00:41:05,248 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-01-19 00:41:05,248 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-01-19 00:41:05,248 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-01-19 00:41:05,248 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-01-19 00:41:05,250 [ scc.git] DEBUG Calling 'git reset --hard 5838ca0f37d2e0cbe1033e708f9b9f29c5e328d6' 2026-01-19 00:41:05,254 [ scc.git] DEBUG HEAD is now at 5838ca0 merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2026-01-19 00:41:05,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:41:05,641 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-01-19 00:41:05,644 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2026-01-19 00:41:05,646 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#24](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2026-01-19 00:41:05,648 [ scc.config] DEBUG Found github.token 2026-01-19 00:41:05,648 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2026-01-19 00:41:05,648 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-19 00:41:05,687 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:41:05,687 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:05,689 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:41:05,725 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-19 00:41:05,728 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcc43ce6f10> has no local changes 2026-01-19 00:41:05,728 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#24 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/)' 2026-01-19 00:41:05,734 [ scc.git] DEBUG [detached HEAD 9cceedb] merge master -Dorg -Ssuccess-only 2026-01-19 00:41:05,734 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:41:05,734 [ scc.repo] DEBUG ## PRs found: 2026-01-19 00:41:06,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2026-01-19 00:41:06,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None 2026-01-19 00:41:07,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None 2026-01-19 00:41:07,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f HTTP/1.1" 200 None 2026-01-19 00:41:08,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:41:08,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f HTTP/1.1" 200 None 2026-01-19 00:41:09,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:41:09,055 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-01-19 00:41:09,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2026-01-19 00:41:10,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2026-01-19 00:41:10,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2026-01-19 00:41:11,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:41:11,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2026-01-19 00:41:11,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:41:11,879 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-01-19 00:41:12,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2026-01-19 00:41:12,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2026-01-19 00:41:13,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2026-01-19 00:41:13,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:41:14,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2026-01-19 00:41:14,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:41:14,729 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-01-19 00:41:14,729 [ scc.repo] DEBUG ## Branches found: 2026-01-19 00:41:14,729 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-01-19 00:41:14,729 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:41:14,729 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:14,732 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-19 00:41:14,734 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-19 00:41:14,734 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-19 00:41:14,737 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-19 00:41:14,743 [ scc.git] DEBUG Updating 3cd120c..55060a2 2026-01-19 00:41:15,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2026-01-19 00:41:15,405 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2026-01-19 00:41:15,672 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-01-19 00:41:15,672 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2026-01-19 00:41:15,676 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2026-01-19 00:41:15,938 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-01-19 00:41:15,938 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2026-01-19 00:41:15,942 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head' 2026-01-19 00:41:16,197 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-01-19 00:41:16,197 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD 2026-01-19 00:41:16,201 [ scc.git] DEBUG ## Unique users: [] 2026-01-19 00:41:16,201 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:41:16,202 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:16,204 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-01-19 00:41:16,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:16,210 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-01-19 00:41:16,222 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2026-01-19 00:41:16,222 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2026-01-19 00:41:16,222 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-01-19 00:41:16,222 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-01-19 00:41:16,222 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-01-19 00:41:16,222 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-01-19 00:41:16,225 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-01-19 00:41:16,229 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-01-19 00:41:16,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:41:16,383 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-01-19 00:41:16,387 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2026-01-19 00:41:16,390 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#24](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2026-01-19 00:41:16,392 [ scc.config] DEBUG Found github.token 2026-01-19 00:41:16,392 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2026-01-19 00:41:16,392 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2026-01-19 00:41:16,396 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:16,398 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2026-01-19 00:41:16,411 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-01-19 00:41:16,411 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-01-19 00:41:16,411 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2026-01-19 00:41:16,411 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-01-19 00:41:16,412 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-01-19 00:41:16,415 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-01-19 00:41:16,419 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-01-19 00:41:16,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:41:16,776 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2026-01-19 00:41:16,780 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2026-01-19 00:41:16,783 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#24](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2026-01-19 00:41:16,785 [ scc.config] DEBUG Found github.token 2026-01-19 00:41:16,785 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2026-01-19 00:41:16,785 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-01-19 00:41:16,788 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:16,790 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-01-19 00:41:16,798 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:41:16,802 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++- 2026-01-19 00:41:16,802 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-) 2026-01-19 00:41:17,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:41:17,162 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-19 00:41:17,201 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:41:17,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:17,203 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:41:17,240 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-19 00:41:17,244 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcc43c1c890> has no local changes 2026-01-19 00:41:17,244 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#24 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/)' 2026-01-19 00:41:17,250 [ scc.git] DEBUG [detached HEAD ee06f72] merge master -Dorg -Ssuccess-only 2026-01-19 00:41:17,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:41:17,251 [ scc.repo] DEBUG ## PRs found: 2026-01-19 00:41:17,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2026-01-19 00:41:18,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2026-01-19 00:41:18,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2026-01-19 00:41:19,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:41:19,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:41:20,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2026-01-19 00:41:20,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:41:20,698 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-01-19 00:41:21,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2026-01-19 00:41:21,233 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:41:21,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2026-01-19 00:41:22,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:41:22,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:41:23,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2026-01-19 00:41:23,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:41:23,834 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-01-19 00:41:24,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2026-01-19 00:41:24,335 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:41:24,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2026-01-19 00:41:25,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:41:25,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:41:26,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2026-01-19 00:41:26,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:41:26,917 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-01-19 00:41:27,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2026-01-19 00:41:27,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2026-01-19 00:41:28,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2026-01-19 00:41:28,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2026-01-19 00:41:29,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2026-01-19 00:41:30,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2026-01-19 00:41:30,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2026-01-19 00:41:30,721 [ scc.repo] DEBUG ## Branches found: 2026-01-19 00:41:30,721 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-01-19 00:41:30,721 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:41:30,721 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:30,724 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-19 00:41:30,726 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-19 00:41:30,726 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-19 00:41:30,729 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-19 00:41:30,732 [ scc.git] DEBUG Already up to date. 2026-01-19 00:41:30,732 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2026-01-19 00:41:31,003 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-01-19 00:41:31,003 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2026-01-19 00:41:31,007 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2026-01-19 00:41:31,265 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-01-19 00:41:31,265 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2026-01-19 00:41:31,268 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2026-01-19 00:41:31,517 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-01-19 00:41:31,517 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2026-01-19 00:41:31,521 [ scc.git] DEBUG ## Unique users: [] 2026-01-19 00:41:31,521 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:41:31,521 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:31,523 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2026-01-19 00:41:31,525 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:31,528 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2026-01-19 00:41:31,535 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:41:31,538 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2026-01-19 00:41:31,538 [ scc.git] DEBUG package.json | 2 +- 2026-01-19 00:41:31,538 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2026-01-19 00:41:31,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:41:31,688 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2026-01-19 00:41:31,691 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:31,693 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2026-01-19 00:41:31,702 [ scc.git] DEBUG Auto-merging package-lock.json 2026-01-19 00:41:31,702 [ scc.git] DEBUG Auto-merging package.json 2026-01-19 00:41:31,702 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:41:31,706 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2026-01-19 00:41:31,706 [ scc.git] DEBUG package.json | 2 +- 2026-01-19 00:41:31,706 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-01-19 00:41:32,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:41:32,074 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-01-19 00:41:32,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:32,079 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-01-19 00:41:32,087 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:41:32,090 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-01-19 00:41:32,090 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-19 00:41:32,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:41:32,625 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-19 00:41:32,662 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:41:32,663 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:32,665 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:41:32,703 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-19 00:41:32,706 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcc419f59d0> has no local changes 2026-01-19 00:41:32,706 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#24 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/)' 2026-01-19 00:41:32,713 [ scc.git] DEBUG [detached HEAD 94270da] merge master -Dorg -Ssuccess-only 2026-01-19 00:41:32,713 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:41:32,713 [ scc.repo] DEBUG ## PRs found: 2026-01-19 00:41:33,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2026-01-19 00:41:33,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2026-01-19 00:41:33,629 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:41:34,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2026-01-19 00:41:34,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:41:35,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:41:35,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2026-01-19 00:41:36,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:41:36,116 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-19 00:41:36,116 [ scc.repo] DEBUG ## Branches found: 2026-01-19 00:41:36,116 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-01-19 00:41:36,116 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:41:36,116 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:36,118 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-19 00:41:36,121 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-19 00:41:36,121 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-19 00:41:36,123 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-19 00:41:36,126 [ scc.git] DEBUG Already up to date. 2026-01-19 00:41:36,126 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2026-01-19 00:41:36,400 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2026-01-19 00:41:36,400 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2026-01-19 00:41:36,404 [ scc.git] DEBUG ## Unique users: [] 2026-01-19 00:41:36,404 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:41:36,404 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:36,407 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2026-01-19 00:41:36,409 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:36,412 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2026-01-19 00:41:36,418 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:41:36,420 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-01-19 00:41:36,420 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-19 00:41:36,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:41:36,577 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-19 00:41:36,616 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:41:36,616 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:36,618 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:41:36,656 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-19 00:41:36,659 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcc41a45850> has no local changes 2026-01-19 00:41:36,659 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#24 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/)' 2026-01-19 00:41:36,664 [ scc.git] DEBUG [detached HEAD a4724bf] merge master -Dorg -Ssuccess-only 2026-01-19 00:41:36,665 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:41:36,665 [ scc.repo] DEBUG ## PRs found: 2026-01-19 00:41:37,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2026-01-19 00:41:37,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None 2026-01-19 00:41:37,629 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:41:38,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-01-19 00:41:38,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:41:39,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:41:39,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-01-19 00:41:40,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None 2026-01-19 00:41:40,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-01-19 00:41:41,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None 2026-01-19 00:41:41,110 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-19 00:41:41,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None 2026-01-19 00:41:42,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None 2026-01-19 00:41:42,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2026-01-19 00:41:43,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:41:43,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:41:44,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2026-01-19 00:41:44,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None 2026-01-19 00:41:44,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2026-01-19 00:41:45,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None 2026-01-19 00:41:45,409 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions' 2026-01-19 00:41:45,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2026-01-19 00:41:45,937 [ scc.repo] DEBUG ## Branches found: 2026-01-19 00:41:45,937 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-01-19 00:41:45,937 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:41:45,937 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:45,940 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-19 00:41:45,942 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-19 00:41:45,942 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-19 00:41:45,945 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-19 00:41:45,947 [ scc.git] DEBUG Already up to date. 2026-01-19 00:41:45,947 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head' 2026-01-19 00:41:46,218 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2026-01-19 00:41:46,218 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD 2026-01-19 00:41:46,222 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head' 2026-01-19 00:41:46,476 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2026-01-19 00:41:46,476 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD 2026-01-19 00:41:46,480 [ scc.git] DEBUG ## Unique users: [] 2026-01-19 00:41:46,480 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:41:46,480 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:46,483 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3' 2026-01-19 00:41:46,486 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:46,488 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3' 2026-01-19 00:41:46,495 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:41:46,498 [ scc.git] DEBUG setup.py | 4 +- 2026-01-19 00:41:46,498 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 + 2026-01-19 00:41:46,498 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++-- 2026-01-19 00:41:46,498 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-) 2026-01-19 00:41:46,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:41:46,672 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301' 2026-01-19 00:41:46,675 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:46,677 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301' 2026-01-19 00:41:46,684 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:41:46,687 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-01-19 00:41:46,687 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-19 00:41:47,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:41:47,092 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-19 00:41:47,131 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:41:47,131 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:47,133 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:41:47,172 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-19 00:41:47,175 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcc43c33090> has no local changes 2026-01-19 00:41:47,175 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#24 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/)' 2026-01-19 00:41:47,180 [ scc.git] DEBUG [detached HEAD c8ce2d4] merge master -Dorg -Ssuccess-only 2026-01-19 00:41:47,181 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:41:47,181 [ scc.repo] DEBUG ## PRs found: 2026-01-19 00:41:47,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2026-01-19 00:41:48,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2026-01-19 00:41:48,097 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:41:48,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2026-01-19 00:41:49,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:41:49,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:41:50,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2026-01-19 00:41:50,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:41:50,622 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-19 00:41:51,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2026-01-19 00:41:51,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2026-01-19 00:41:52,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2026-01-19 00:41:52,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:41:53,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2026-01-19 00:41:53,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:41:53,666 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2026-01-19 00:41:53,666 [ scc.repo] DEBUG ## Branches found: 2026-01-19 00:41:53,666 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-01-19 00:41:53,666 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:41:53,666 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:53,668 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-19 00:41:53,671 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-19 00:41:53,671 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-19 00:41:53,673 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-19 00:41:53,676 [ scc.git] DEBUG Already up to date. 2026-01-19 00:41:53,676 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-01-19 00:41:53,959 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-01-19 00:41:53,959 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-01-19 00:41:53,963 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-01-19 00:41:54,218 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-01-19 00:41:54,218 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-01-19 00:41:54,222 [ scc.git] DEBUG ## Unique users: [] 2026-01-19 00:41:54,222 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:41:54,222 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:54,225 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-01-19 00:41:54,227 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:54,230 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-01-19 00:41:54,237 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2026-01-19 00:41:54,237 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2026-01-19 00:41:54,237 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2026-01-19 00:41:54,238 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2026-01-19 00:41:54,238 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2026-01-19 00:41:54,238 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2026-01-19 00:41:54,238 [ scc.git] DEBUG Auto-merging setup.py 2026-01-19 00:41:54,238 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2026-01-19 00:41:54,238 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-01-19 00:41:54,238 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-01-19 00:41:54,241 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2026-01-19 00:41:54,245 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2026-01-19 00:41:54,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:41:54,414 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-01-19 00:41:54,417 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2026-01-19 00:41:54,419 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#24](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - omero_signup/urls.py - omero_signup/signup_settings.py - setup.py --conflicts 2026-01-19 00:41:54,421 [ scc.config] DEBUG Found github.token 2026-01-19 00:41:54,421 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2026-01-19 00:41:54,421 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-01-19 00:41:54,424 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:54,426 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-01-19 00:41:54,433 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:41:54,436 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-01-19 00:41:54,436 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-19 00:41:54,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:41:54,819 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-19 00:41:54,856 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:41:54,856 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:54,859 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:41:54,896 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-19 00:41:54,899 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcc41a3e7d0> has no local changes 2026-01-19 00:41:54,900 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#24 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/)' 2026-01-19 00:41:54,905 [ scc.git] DEBUG [detached HEAD cc2912e] merge master -Dorg -Ssuccess-only 2026-01-19 00:41:54,905 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:41:54,905 [ scc.repo] DEBUG ## PRs found: 2026-01-19 00:41:55,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2026-01-19 00:41:55,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2026-01-19 00:41:56,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2026-01-19 00:41:56,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2026-01-19 00:41:57,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2026-01-19 00:41:57,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:41:58,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:41:58,273 [ scc.repo] DEBUG ## Branches found: 2026-01-19 00:41:58,273 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-01-19 00:41:58,273 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:41:58,273 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:41:58,276 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-19 00:41:58,278 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-19 00:41:58,278 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-19 00:41:58,281 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-19 00:41:58,288 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2026-01-19 00:41:58,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2026-01-19 00:41:59,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2026-01-19 00:42:00,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2026-01-19 00:42:00,543 [ scc.git] DEBUG ## Unique users: [] 2026-01-19 00:42:00,543 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:42:00,543 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:00,546 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-19 00:42:00,584 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:42:00,584 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:00,586 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:42:00,624 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-19 00:42:00,627 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcc43bdd510> has no local changes 2026-01-19 00:42:00,627 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Generated by OMERO-plugins-push#24 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/)' 2026-01-19 00:42:00,633 [ scc.git] DEBUG [detached HEAD 3182daa] merge master -Dorg -Ssuccess-only 2026-01-19 00:42:00,633 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:00,633 [ scc.repo] DEBUG ## PRs found: 2026-01-19 00:42:01,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2026-01-19 00:42:01,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2026-01-19 00:42:01,632 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:42:02,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2026-01-19 00:42:02,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:42:03,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:42:03,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2026-01-19 00:42:04,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:42:04,358 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-19 00:42:04,358 [ scc.repo] DEBUG ## Branches found: 2026-01-19 00:42:04,358 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-01-19 00:42:04,358 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:42:04,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:04,360 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-19 00:42:04,363 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-19 00:42:04,363 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-19 00:42:04,366 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-19 00:42:04,369 [ scc.git] DEBUG Already up to date. 2026-01-19 00:42:04,369 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-01-19 00:42:04,634 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2026-01-19 00:42:04,634 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-01-19 00:42:04,638 [ scc.git] DEBUG ## Unique users: [] 2026-01-19 00:42:04,638 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:42:04,638 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:04,640 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-01-19 00:42:04,643 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:04,645 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-01-19 00:42:04,651 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:42:04,654 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-01-19 00:42:04,654 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-19 00:42:04,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:04,795 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-19 00:42:04,833 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:42:04,833 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:04,836 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:42:04,872 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-19 00:42:04,875 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcc41a57e90> has no local changes 2026-01-19 00:42:04,875 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#24 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/)' 2026-01-19 00:42:04,881 [ scc.git] DEBUG [detached HEAD b109be3] merge master -Dorg -Ssuccess-only 2026-01-19 00:42:04,881 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:04,881 [ scc.repo] DEBUG ## PRs found: 2026-01-19 00:42:05,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2026-01-19 00:42:05,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2026-01-19 00:42:05,895 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:42:06,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2026-01-19 00:42:06,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:42:07,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:42:07,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2026-01-19 00:42:08,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:42:08,418 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-19 00:42:08,418 [ scc.repo] DEBUG ## Branches found: 2026-01-19 00:42:08,418 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-01-19 00:42:08,418 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:42:08,418 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:08,421 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-19 00:42:08,423 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-19 00:42:08,423 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-19 00:42:08,426 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-19 00:42:08,432 [ scc.git] DEBUG Updating deab817..160d894 2026-01-19 00:42:09,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2026-01-19 00:42:09,144 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-01-19 00:42:09,409 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2026-01-19 00:42:09,409 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-01-19 00:42:09,413 [ scc.git] DEBUG ## Unique users: [] 2026-01-19 00:42:09,413 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:42:09,413 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:09,415 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-01-19 00:42:09,417 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:09,419 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-01-19 00:42:09,426 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:42:09,429 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-01-19 00:42:09,429 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-19 00:42:09,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:09,574 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-19 00:42:09,612 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:42:09,612 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:09,614 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:42:09,650 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-19 00:42:09,653 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcc41a58510> has no local changes 2026-01-19 00:42:09,653 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#24 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/)' 2026-01-19 00:42:09,658 [ scc.git] DEBUG [detached HEAD 688bda7] merge master -Dorg -Ssuccess-only 2026-01-19 00:42:09,658 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:09,658 [ scc.git] INFO Overriding base-branch from master to main 2026-01-19 00:42:09,658 [ scc.repo] DEBUG ## PRs found: 2026-01-19 00:42:10,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2026-01-19 00:42:10,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2026-01-19 00:42:11,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2026-01-19 00:42:11,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2026-01-19 00:42:12,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:42:12,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:42:12,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2026-01-19 00:42:13,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:42:13,331 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2026-01-19 00:42:13,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2026-01-19 00:42:14,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2026-01-19 00:42:14,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2026-01-19 00:42:15,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2026-01-19 00:42:15,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:42:16,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2026-01-19 00:42:16,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:42:16,592 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-01-19 00:42:16,593 [ scc.repo] DEBUG ## Branches found: 2026-01-19 00:42:16,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-01-19 00:42:16,593 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:42:16,593 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:16,595 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2026-01-19 00:42:16,598 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-19 00:42:16,598 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2026-01-19 00:42:16,600 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2026-01-19 00:42:16,607 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2026-01-19 00:42:17,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2026-01-19 00:42:17,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2026-01-19 00:42:17,931 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2026-01-19 00:42:18,199 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-01-19 00:42:18,199 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2026-01-19 00:42:18,203 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2026-01-19 00:42:18,459 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-01-19 00:42:18,459 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2026-01-19 00:42:18,462 [ scc.git] DEBUG ## Unique users: [] 2026-01-19 00:42:18,462 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:42:18,462 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:18,465 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-01-19 00:42:18,467 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:18,470 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-01-19 00:42:18,477 [ scc.git] DEBUG Auto-merging README.rst 2026-01-19 00:42:18,477 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2026-01-19 00:42:18,477 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2026-01-19 00:42:18,477 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-01-19 00:42:18,478 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-01-19 00:42:18,478 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-01-19 00:42:18,480 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-01-19 00:42:18,484 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-01-19 00:42:18,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:18,621 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-01-19 00:42:18,623 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-01-19 00:42:18,626 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#24](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2026-01-19 00:42:18,628 [ scc.config] DEBUG Found github.token 2026-01-19 00:42:18,628 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2026-01-19 00:42:18,628 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-01-19 00:42:18,631 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:18,633 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-01-19 00:42:18,641 [ scc.git] DEBUG Auto-merging README.rst 2026-01-19 00:42:18,641 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-01-19 00:42:18,641 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:42:18,644 [ scc.git] DEBUG README.rst | 3 + 2026-01-19 00:42:18,644 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2026-01-19 00:42:18,644 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2026-01-19 00:42:18,644 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2026-01-19 00:42:18,644 [ scc.git] DEBUG setup.py | 5 +- 2026-01-19 00:42:18,644 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2026-01-19 00:42:18,645 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2026-01-19 00:42:19,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:19,018 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-19 00:42:19,056 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:42:19,057 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:19,059 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:42:19,095 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-19 00:42:19,098 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcc43b1a9d0> has no local changes 2026-01-19 00:42:19,098 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#24 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/)' 2026-01-19 00:42:19,104 [ scc.git] DEBUG [detached HEAD 3f80fb4] merge master -Dorg -Ssuccess-only 2026-01-19 00:42:19,104 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:19,104 [ scc.repo] DEBUG ## PRs found: 2026-01-19 00:42:19,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2026-01-19 00:42:20,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2026-01-19 00:42:20,009 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:42:20,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2026-01-19 00:42:21,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:42:21,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:42:22,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2026-01-19 00:42:22,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:42:22,571 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-19 00:42:22,571 [ scc.repo] DEBUG ## Branches found: 2026-01-19 00:42:22,571 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-01-19 00:42:22,571 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:42:22,571 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:22,574 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-19 00:42:22,576 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-19 00:42:22,577 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-19 00:42:22,579 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-19 00:42:22,582 [ scc.git] DEBUG Already up to date. 2026-01-19 00:42:22,582 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2026-01-19 00:42:22,856 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2026-01-19 00:42:22,856 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2026-01-19 00:42:22,860 [ scc.git] DEBUG ## Unique users: [] 2026-01-19 00:42:22,860 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:42:22,860 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:22,862 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-01-19 00:42:22,865 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:22,867 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-01-19 00:42:22,873 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:42:22,875 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-01-19 00:42:22,875 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-19 00:42:23,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:23,023 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-19 00:42:23,060 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:42:23,060 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:23,062 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:42:23,100 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-19 00:42:23,103 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcc41a8a310> has no local changes 2026-01-19 00:42:23,103 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#24 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/)' 2026-01-19 00:42:23,108 [ scc.git] DEBUG [detached HEAD 476f62c] merge master -Dorg -Ssuccess-only 2026-01-19 00:42:23,109 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:23,109 [ scc.repo] DEBUG ## PRs found: 2026-01-19 00:42:23,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2026-01-19 00:42:24,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2026-01-19 00:42:24,009 [ scc.repo] DEBUG # ... Include label: dependencies 2026-01-19 00:42:24,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2026-01-19 00:42:25,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-01-19 00:42:25,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-01-19 00:42:26,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2026-01-19 00:42:26,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2026-01-19 00:42:26,628 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-19 00:42:26,628 [ scc.repo] DEBUG ## Branches found: 2026-01-19 00:42:26,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-01-19 00:42:26,628 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:42:26,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:26,631 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-19 00:42:26,633 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-19 00:42:26,634 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-19 00:42:26,636 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-19 00:42:26,639 [ scc.git] DEBUG Already up to date. 2026-01-19 00:42:26,639 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2026-01-19 00:42:26,913 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2026-01-19 00:42:26,913 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2026-01-19 00:42:26,917 [ scc.git] DEBUG ## Unique users: [] 2026-01-19 00:42:26,917 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:42:26,917 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:26,919 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-01-19 00:42:26,922 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:26,924 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-01-19 00:42:26,931 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-01-19 00:42:26,934 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-01-19 00:42:26,934 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-01-19 00:42:27,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:27,075 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-19 00:42:27,114 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:42:27,115 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:27,117 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:42:27,155 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-19 00:42:27,159 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcc41a82750> has no local changes 2026-01-19 00:42:27,159 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#24 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/)' 2026-01-19 00:42:27,164 [ scc.git] DEBUG [detached HEAD fff5205] merge master -Dorg -Ssuccess-only 2026-01-19 00:42:27,164 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:27,165 [ scc.repo] DEBUG ## PRs found: 2026-01-19 00:42:27,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2026-01-19 00:42:27,499 [ scc.repo] DEBUG ## Branches found: 2026-01-19 00:42:27,499 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-01-19 00:42:27,499 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:42:27,499 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:27,502 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-01-19 00:42:27,504 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-19 00:42:27,504 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-01-19 00:42:27,506 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-01-19 00:42:27,509 [ scc.git] DEBUG Already up to date. 2026-01-19 00:42:27,509 [ scc.git] DEBUG ## Unique users: [] 2026-01-19 00:42:27,509 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:42:27,509 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:27,511 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-19 00:42:27,548 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:42:27,548 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:27,550 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:42:27,584 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-19 00:42:27,587 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcc43bc08d0> has no local changes 2026-01-19 00:42:27,587 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#24 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/)' 2026-01-19 00:42:27,593 [ scc.git] DEBUG [detached HEAD 34750f9] merge master -Dorg -Ssuccess-only 2026-01-19 00:42:27,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:27,593 [ scc.git] INFO Overriding base-branch from master to develop 2026-01-19 00:42:27,593 [ scc.repo] DEBUG ## PRs found: 2026-01-19 00:42:28,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2026-01-19 00:42:28,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2026-01-19 00:42:29,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2026-01-19 00:42:29,042 [ scc.repo] DEBUG ## Branches found: 2026-01-19 00:42:29,042 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-01-19 00:42:29,043 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:42:29,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:29,045 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-01-19 00:42:29,047 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-01-19 00:42:29,047 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-01-19 00:42:29,050 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-01-19 00:42:29,062 [ scc.git] DEBUG Updating 4b4c755..fb91f15 2026-01-19 00:42:29,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-01-19 00:42:30,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-01-19 00:42:31,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-01-19 00:42:31,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-01-19 00:42:32,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2026-01-19 00:42:33,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2026-01-19 00:42:33,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2026-01-19 00:42:33,920 [ scc.git] DEBUG ## Unique users: [] 2026-01-19 00:42:33,920 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:42:33,920 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:33,922 [ scc.git] DEBUG Calling 'git submodule update' 2026-01-19 00:42:33,960 [ scc.git] DEBUG Get sha1 of %s 2026-01-19 00:42:33,960 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-01-19 00:42:33,962 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:42:33,997 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-19 00:42:34,001 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcc400e4210> has no local changes 2026-01-19 00:42:34,001 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) Updating 4b4c755..fb91f15 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#24 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/)' 2026-01-19 00:42:34,007 [ scc.git] DEBUG [detached HEAD 3fea584] merge master -Dorg -Ssuccess-only 2026-01-19 00:42:34,007 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:34,007 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-01-19 00:42:34,079 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2026-01-19 00:42:34,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:34,319 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2026-01-19 00:42:34,321 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2026-01-19 00:42:34,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:34,704 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2026-01-19 00:42:34,705 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2026-01-19 00:42:35,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:35,117 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2026-01-19 00:42:35,119 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2026-01-19 00:42:35,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:35,511 [ scc.config] DEBUG Found submodule.omero-figure.url 2026-01-19 00:42:35,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:35,919 [ scc.config] DEBUG Found submodule.omero-figure.branch 2026-01-19 00:42:35,921 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2026-01-19 00:42:36,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:36,320 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2026-01-19 00:42:36,322 [ scc.config] DEBUG Found submodule.omero-gallery.url 2026-01-19 00:42:36,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:36,716 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2026-01-19 00:42:36,718 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2026-01-19 00:42:37,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:37,130 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2026-01-19 00:42:37,132 [ scc.config] DEBUG Found submodule.omero-mapr.url 2026-01-19 00:42:37,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:37,527 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2026-01-19 00:42:37,528 [ scc.config] DEBUG Found submodule.omero-metadata.url 2026-01-19 00:42:37,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:37,923 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2026-01-19 00:42:37,925 [ scc.config] DEBUG Found submodule.omero-parade.url 2026-01-19 00:42:38,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:38,325 [ scc.config] DEBUG Found submodule.omero-parade.branch 2026-01-19 00:42:38,327 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2026-01-19 00:42:38,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:38,727 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2026-01-19 00:42:38,729 [ scc.config] DEBUG Found submodule.omero-rois.url 2026-01-19 00:42:39,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:39,130 [ scc.config] DEBUG Found submodule.omero-signup.url 2026-01-19 00:42:39,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:39,517 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2026-01-19 00:42:39,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:39,914 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2026-01-19 00:42:39,917 [ scc.config] DEBUG Found submodule.omero-upload.url 2026-01-19 00:42:40,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:40,305 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2026-01-19 00:42:40,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:40,765 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2026-01-19 00:42:41,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:41,166 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2026-01-19 00:42:41,168 [ scc.config] DEBUG Found submodule.omero-weberror.url 2026-01-19 00:42:41,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:41,557 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2026-01-19 00:42:41,559 [ scc.config] DEBUG Found submodule.omero-webtest.url 2026-01-19 00:42:41,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:41,959 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2026-01-19 00:42:41,961 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2026-01-19 00:42:42,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:42,354 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2026-01-19 00:42:42,355 [ scc.config] DEBUG Found submodule.scripts.url 2026-01-19 00:42:42,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-01-19 00:42:42,743 [ scc.config] DEBUG Found submodule.scripts.branch 2026-01-19 00:42:42,743 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-01-19 00:42:42,818 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcc44ba1190> has local changes 2026-01-19 00:42:42,818 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..37ea700 Previously merged: - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 174 will-moore 'Skip wells' - PR 181 will-moore 'Add labels support for import' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' Conflicting PRs (not included): - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Excluded PRs: - PR 662 will-moore 'Export script runnable OMERO' (stage: draft) - PR 619 will-moore 'OME-Zarr support' (stage: draft) Updating 9cc36cde..ddcf816a Previously merged: - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 659 will-moore 'Fix ability of export script to be installed and run without reportlab' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..5e2de43 Previously merged: - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 513 jburel 'Bump Python version' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) Updating 4b4c755..fb91f15 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#24 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/24/)' 2026-01-19 00:42:42,829 [ scc.git] DEBUG [detached HEAD 0b9fe19] merge master -Dorg -Ssuccess-only 2026-01-19 00:42:42,829 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2026-01-19 00:42:42,829 [ scc.merge] INFO Repository: ome/omero-plugins 2026-01-19 00:42:42,829 [ scc.merge] INFO Already up to date. 2026-01-19 00:42:42,829 [ scc.merge] INFO 2026-01-19 00:42:42,829 [ scc.merge] INFO Merged PRs: 2026-01-19 00:42:42,829 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-01-19 00:42:42,829 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-01-19 00:42:42,829 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-01-19 00:42:42,829 [ scc.merge] INFO 2026-01-19 00:42:42,829 [ scc.merge] INFO Repository: ome/minimal-omero-client 2026-01-19 00:42:42,829 [ scc.merge] INFO Already up to date. 2026-01-19 00:42:42,829 [ scc.merge] INFO 2026-01-19 00:42:42,829 [ scc.merge] INFO 2026-01-19 00:42:42,829 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2026-01-19 00:42:42,829 [ scc.merge] INFO Excluded PRs: 2026-01-19 00:42:42,829 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2026-01-19 00:42:42,829 [ scc.merge] INFO Already up to date. 2026-01-19 00:42:42,829 [ scc.merge] INFO 2026-01-19 00:42:42,829 [ scc.merge] INFO Merged PRs: 2026-01-19 00:42:42,829 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-19 00:42:42,829 [ scc.merge] INFO 2026-01-19 00:42:42,830 [ scc.merge] INFO Repository: ome/omero-cli-render 2026-01-19 00:42:42,830 [ scc.merge] INFO Excluded PRs: 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2026-01-19 00:42:42,830 [ scc.merge] INFO Updating ce6e13c..68b7303 2026-01-19 00:42:42,830 [ scc.merge] INFO Previously merged: 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2026-01-19 00:42:42,830 [ scc.merge] INFO 2026-01-19 00:42:42,830 [ scc.merge] INFO Merged PRs: 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2026-01-19 00:42:42,830 [ scc.merge] INFO 2026-01-19 00:42:42,830 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2026-01-19 00:42:42,830 [ scc.merge] INFO Excluded PRs: 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure) 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2026-01-19 00:42:42,830 [ scc.merge] INFO Updating 11d3587..37ea700 2026-01-19 00:42:42,830 [ scc.merge] INFO Previously merged: 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-01-19 00:42:42,830 [ scc.merge] INFO 2026-01-19 00:42:42,830 [ scc.merge] INFO Merged PRs: 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option' 2026-01-19 00:42:42,830 [ scc.merge] INFO 2026-01-19 00:42:42,830 [ scc.merge] INFO Conflicting PRs (not included): 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-01-19 00:42:42,830 [ scc.merge] INFO 2026-01-19 00:42:42,830 [ scc.merge] INFO Repository: ome/omero-figure 2026-01-19 00:42:42,830 [ scc.merge] INFO Excluded PRs: 2026-01-19 00:42:42,830 [ scc.merge] INFO - PR 662 will-moore 'Export script runnable OMERO' (stage: draft) 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft) 2026-01-19 00:42:42,831 [ scc.merge] INFO Updating 9cc36cde..ddcf816a 2026-01-19 00:42:42,831 [ scc.merge] INFO Previously merged: 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-01-19 00:42:42,831 [ scc.merge] INFO 2026-01-19 00:42:42,831 [ scc.merge] INFO Merged PRs: 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 659 will-moore 'Fix ability of export script to be installed and run without reportlab' 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-01-19 00:42:42,831 [ scc.merge] INFO 2026-01-19 00:42:42,831 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2026-01-19 00:42:42,831 [ scc.merge] INFO Already up to date. 2026-01-19 00:42:42,831 [ scc.merge] INFO 2026-01-19 00:42:42,831 [ scc.merge] INFO Merged PRs: 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2026-01-19 00:42:42,831 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-19 00:42:42,831 [ scc.merge] INFO 2026-01-19 00:42:42,831 [ scc.merge] INFO Repository: ome/omero-gallery 2026-01-19 00:42:42,831 [ scc.merge] INFO Already up to date. 2026-01-19 00:42:42,831 [ scc.merge] INFO 2026-01-19 00:42:42,831 [ scc.merge] INFO Merged PRs: 2026-01-19 00:42:42,832 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-01-19 00:42:42,832 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-01-19 00:42:42,832 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-01-19 00:42:42,832 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-01-19 00:42:42,832 [ scc.merge] INFO 2026-01-19 00:42:42,832 [ scc.merge] INFO Conflicting PRs (not included): 2026-01-19 00:42:42,832 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-01-19 00:42:42,832 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-01-19 00:42:42,832 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-01-19 00:42:42,832 [ scc.merge] INFO 2026-01-19 00:42:42,832 [ scc.merge] INFO Repository: ome/omero-iviewer 2026-01-19 00:42:42,832 [ scc.merge] INFO Excluded PRs: 2026-01-19 00:42:42,832 [ scc.merge] INFO - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) 2026-01-19 00:42:42,832 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft) 2026-01-19 00:42:42,832 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) 2026-01-19 00:42:42,832 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2026-01-19 00:42:42,832 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2026-01-19 00:42:42,832 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2026-01-19 00:42:42,832 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure) 2026-01-19 00:42:42,832 [ scc.merge] INFO Updating 7a798ce..5e2de43 2026-01-19 00:42:42,832 [ scc.merge] INFO Previously merged: 2026-01-19 00:42:42,832 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2026-01-19 00:42:42,832 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-01-19 00:42:42,832 [ scc.merge] INFO 2026-01-19 00:42:42,832 [ scc.merge] INFO Merged PRs: 2026-01-19 00:42:42,832 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2026-01-19 00:42:42,832 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2026-01-19 00:42:42,832 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2026-01-19 00:42:42,832 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2026-01-19 00:42:42,832 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-01-19 00:42:42,832 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2026-01-19 00:42:42,832 [ scc.merge] INFO 2026-01-19 00:42:42,832 [ scc.merge] INFO Conflicting PRs (not included): 2026-01-19 00:42:42,832 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2026-01-19 00:42:42,832 [ scc.merge] INFO 2026-01-19 00:42:42,832 [ scc.merge] INFO Repository: ome/omero-mapr 2026-01-19 00:42:42,832 [ scc.merge] INFO Excluded PRs: 2026-01-19 00:42:42,832 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2026-01-19 00:42:42,832 [ scc.merge] INFO Already up to date. 2026-01-19 00:42:42,832 [ scc.merge] INFO 2026-01-19 00:42:42,832 [ scc.merge] INFO Merged PRs: 2026-01-19 00:42:42,832 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2026-01-19 00:42:42,832 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-01-19 00:42:42,832 [ scc.merge] INFO 2026-01-19 00:42:42,832 [ scc.merge] INFO Conflicting PRs (not included): 2026-01-19 00:42:42,833 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-19 00:42:42,833 [ scc.merge] INFO 2026-01-19 00:42:42,833 [ scc.merge] INFO Repository: ome/omero-metadata 2026-01-19 00:42:42,833 [ scc.merge] INFO Updating 3cd120c..55060a2 2026-01-19 00:42:42,833 [ scc.merge] INFO Previously merged: 2026-01-19 00:42:42,833 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-01-19 00:42:42,833 [ scc.merge] INFO 2026-01-19 00:42:42,833 [ scc.merge] INFO Merged PRs: 2026-01-19 00:42:42,833 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-01-19 00:42:42,833 [ scc.merge] INFO 2026-01-19 00:42:42,833 [ scc.merge] INFO Conflicting PRs (not included): 2026-01-19 00:42:42,833 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-01-19 00:42:42,833 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-01-19 00:42:42,833 [ scc.merge] INFO 2026-01-19 00:42:42,833 [ scc.merge] INFO Repository: ome/omero-parade 2026-01-19 00:42:42,833 [ scc.merge] INFO Excluded PRs: 2026-01-19 00:42:42,833 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2026-01-19 00:42:42,833 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2026-01-19 00:42:42,833 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2026-01-19 00:42:42,833 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2026-01-19 00:42:42,833 [ scc.merge] INFO Already up to date. 2026-01-19 00:42:42,833 [ scc.merge] INFO 2026-01-19 00:42:42,833 [ scc.merge] INFO Merged PRs: 2026-01-19 00:42:42,833 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-01-19 00:42:42,833 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-01-19 00:42:42,833 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-01-19 00:42:42,833 [ scc.merge] INFO 2026-01-19 00:42:42,833 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2026-01-19 00:42:42,833 [ scc.merge] INFO Already up to date. 2026-01-19 00:42:42,833 [ scc.merge] INFO 2026-01-19 00:42:42,833 [ scc.merge] INFO Merged PRs: 2026-01-19 00:42:42,833 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-19 00:42:42,833 [ scc.merge] INFO 2026-01-19 00:42:42,833 [ scc.merge] INFO Repository: ome/omero-rois 2026-01-19 00:42:42,833 [ scc.merge] INFO Excluded PRs: 2026-01-19 00:42:42,833 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-01-19 00:42:42,833 [ scc.merge] INFO Already up to date. 2026-01-19 00:42:42,833 [ scc.merge] INFO 2026-01-19 00:42:42,833 [ scc.merge] INFO Merged PRs: 2026-01-19 00:42:42,833 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions' 2026-01-19 00:42:42,833 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-19 00:42:42,833 [ scc.merge] INFO 2026-01-19 00:42:42,833 [ scc.merge] INFO Repository: ome/omero-signup 2026-01-19 00:42:42,833 [ scc.merge] INFO Already up to date. 2026-01-19 00:42:42,833 [ scc.merge] INFO 2026-01-19 00:42:42,833 [ scc.merge] INFO Merged PRs: 2026-01-19 00:42:42,834 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-19 00:42:42,834 [ scc.merge] INFO 2026-01-19 00:42:42,834 [ scc.merge] INFO Conflicting PRs (not included): 2026-01-19 00:42:42,834 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2026-01-19 00:42:42,834 [ scc.merge] INFO 2026-01-19 00:42:42,834 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2026-01-19 00:42:42,834 [ scc.merge] INFO Excluded PRs: 2026-01-19 00:42:42,834 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2026-01-19 00:42:42,834 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2026-01-19 00:42:42,834 [ scc.merge] INFO Updating cda3ec6..c8a0015 2026-01-19 00:42:42,834 [ scc.merge] INFO Previously merged: 2026-01-19 00:42:42,834 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2026-01-19 00:42:42,834 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2026-01-19 00:42:42,834 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2026-01-19 00:42:42,834 [ scc.merge] INFO 2026-01-19 00:42:42,834 [ scc.merge] INFO 2026-01-19 00:42:42,834 [ scc.merge] INFO Repository: ome/omero-upload 2026-01-19 00:42:42,834 [ scc.merge] INFO Already up to date. 2026-01-19 00:42:42,834 [ scc.merge] INFO 2026-01-19 00:42:42,834 [ scc.merge] INFO Merged PRs: 2026-01-19 00:42:42,834 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-19 00:42:42,834 [ scc.merge] INFO 2026-01-19 00:42:42,834 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2026-01-19 00:42:42,834 [ scc.merge] INFO Updating deab817..160d894 2026-01-19 00:42:42,834 [ scc.merge] INFO Previously merged: 2026-01-19 00:42:42,834 [ scc.merge] INFO - PR 20 jburel 'Build' 2026-01-19 00:42:42,834 [ scc.merge] INFO 2026-01-19 00:42:42,834 [ scc.merge] INFO Merged PRs: 2026-01-19 00:42:42,834 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-19 00:42:42,834 [ scc.merge] INFO 2026-01-19 00:42:42,834 [ scc.merge] INFO Repository: ome/omero-web-zarr 2026-01-19 00:42:42,834 [ scc.merge] INFO Excluded PRs: 2026-01-19 00:42:42,834 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2026-01-19 00:42:42,834 [ scc.merge] INFO Updating 8f3c313..4e1e685 2026-01-19 00:42:42,834 [ scc.merge] INFO Previously merged: 2026-01-19 00:42:42,834 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2026-01-19 00:42:42,834 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2026-01-19 00:42:42,834 [ scc.merge] INFO 2026-01-19 00:42:42,834 [ scc.merge] INFO Merged PRs: 2026-01-19 00:42:42,834 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2026-01-19 00:42:42,834 [ scc.merge] INFO 2026-01-19 00:42:42,834 [ scc.merge] INFO Conflicting PRs (not included): 2026-01-19 00:42:42,834 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-01-19 00:42:42,834 [ scc.merge] INFO 2026-01-19 00:42:42,834 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2026-01-19 00:42:42,834 [ scc.merge] INFO Already up to date. 2026-01-19 00:42:42,835 [ scc.merge] INFO 2026-01-19 00:42:42,835 [ scc.merge] INFO Merged PRs: 2026-01-19 00:42:42,835 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-19 00:42:42,835 [ scc.merge] INFO 2026-01-19 00:42:42,835 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2026-01-19 00:42:42,835 [ scc.merge] INFO Already up to date. 2026-01-19 00:42:42,835 [ scc.merge] INFO 2026-01-19 00:42:42,835 [ scc.merge] INFO Merged PRs: 2026-01-19 00:42:42,835 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-01-19 00:42:42,835 [ scc.merge] INFO 2026-01-19 00:42:42,835 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2026-01-19 00:42:42,835 [ scc.merge] INFO Already up to date. 2026-01-19 00:42:42,835 [ scc.merge] INFO 2026-01-19 00:42:42,835 [ scc.merge] INFO 2026-01-19 00:42:42,835 [ scc.merge] INFO Repository: ome/scripts 2026-01-19 00:42:42,835 [ scc.merge] INFO Excluded PRs: 2026-01-19 00:42:42,835 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2026-01-19 00:42:42,835 [ scc.merge] INFO Updating 4b4c755..fb91f15 2026-01-19 00:42:42,835 [ scc.merge] INFO Previously merged: 2026-01-19 00:42:42,835 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-01-19 00:42:42,835 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-01-19 00:42:42,835 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-01-19 00:42:42,835 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-01-19 00:42:42,835 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2026-01-19 00:42:42,835 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2026-01-19 00:42:42,835 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2026-01-19 00:42:42,835 [ scc.merge] INFO 2026-01-19 00:42:42,835 [ scc.merge] INFO 2026-01-19 00:42:42,835 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-01-19 00:42:42,835 [ scc.git] DEBUG Calling 'git remote' 2026-01-19 00:42:42,837 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-01-19 00:42:42,837 [ scc.git] DEBUG Calling 'git remote' 2026-01-19 00:42:42,839 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:42,839 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-01-19 00:42:42,839 [ scc.git] DEBUG Calling 'git remote' 2026-01-19 00:42:42,842 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:42,842 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-01-19 00:42:42,842 [ scc.git] DEBUG Calling 'git remote' 2026-01-19 00:42:42,844 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:42,844 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-01-19 00:42:42,844 [ scc.git] DEBUG Calling 'git remote' 2026-01-19 00:42:42,846 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:42,846 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-01-19 00:42:42,846 [ scc.git] DEBUG Calling 'git remote' 2026-01-19 00:42:42,849 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:42,849 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-01-19 00:42:42,849 [ scc.git] DEBUG Calling 'git remote' 2026-01-19 00:42:42,851 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:42,851 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-01-19 00:42:42,851 [ scc.git] DEBUG Calling 'git remote' 2026-01-19 00:42:42,853 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:42,853 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-01-19 00:42:42,853 [ scc.git] DEBUG Calling 'git remote' 2026-01-19 00:42:42,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:42,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-01-19 00:42:42,855 [ scc.git] DEBUG Calling 'git remote' 2026-01-19 00:42:42,857 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:42,857 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-01-19 00:42:42,857 [ scc.git] DEBUG Calling 'git remote' 2026-01-19 00:42:42,859 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:42,859 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-01-19 00:42:42,859 [ scc.git] DEBUG Calling 'git remote' 2026-01-19 00:42:42,861 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:42,861 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-01-19 00:42:42,861 [ scc.git] DEBUG Calling 'git remote' 2026-01-19 00:42:42,864 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:42,864 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-01-19 00:42:42,864 [ scc.git] DEBUG Calling 'git remote' 2026-01-19 00:42:42,866 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:42,866 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-01-19 00:42:42,866 [ scc.git] DEBUG Calling 'git remote' 2026-01-19 00:42:42,868 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:42,868 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-01-19 00:42:42,868 [ scc.git] DEBUG Calling 'git remote' 2026-01-19 00:42:42,870 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:42,870 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-01-19 00:42:42,870 [ scc.git] DEBUG Calling 'git remote' 2026-01-19 00:42:42,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:42,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-01-19 00:42:42,872 [ scc.git] DEBUG Calling 'git remote' 2026-01-19 00:42:42,874 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:42,874 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-01-19 00:42:42,874 [ scc.git] DEBUG Calling 'git remote' 2026-01-19 00:42:42,876 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:42,876 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-01-19 00:42:42,876 [ scc.git] DEBUG Calling 'git remote' 2026-01-19 00:42:42,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:42,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-01-19 00:42:42,878 [ scc.git] DEBUG Calling 'git remote' 2026-01-19 00:42:42,880 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:42,880 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-01-19 00:42:42,880 [ scc.git] DEBUG Calling 'git remote' 2026-01-19 00:42:42,882 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-01-19 00:42:42,882 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-01-19 00:42:42,882 [ scc.git] DEBUG Calling 'git remote' 2026-01-19 00:42:42,884 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.5-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 4067921] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD 9688608] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-01-19 00:43:29,344 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-01-19 00:43:38,712 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-01-19 00:43:41,168 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-01-19 00:43:45,991 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-01-19 00:44:26,706 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS