Skipping 144 KB..
Full LogTestTestTestTestTestTestTestTestTestTestTestTestTest
2024-11-25 00:45:41,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2024-11-25 00:45:41,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2
2024-11-25 00:45:41,803 [ scc.repo] DEBUG - PR 18 jburel 'default size z value'
2024-11-25 00:45:41,803 [ scc.repo] DEBUG ## Branches found:
2024-11-25 00:45:41,803 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2024-11-25 00:45:41,803 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:45:41,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:45:41,809 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-25 00:45:41,813 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-25 00:45:41,814 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-25 00:45:41,819 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-25 00:45:41,830 [ scc.git] DEBUG Updating e5b3ca3..3b6c05a
2024-11-25 00:45:42,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls/30 HTTP/1.1" 200 None
2024-11-25 00:45:42,383 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head'
2024-11-25 00:45:42,745 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2024-11-25 00:45:42,746 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD
2024-11-25 00:45:42,750 [ scc.git] DEBUG ## Unique users: []
2024-11-25 00:45:42,750 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:45:42,751 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:45:42,756 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337'
2024-11-25 00:45:42,762 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:45:42,768 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337'
2024-11-25 00:45:42,832 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py
2024-11-25 00:45:42,833 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-25 00:45:42,836 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++
2024-11-25 00:45:42,836 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-11-25 00:45:42,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:45:42,988 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-25 00:45:43,029 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:45:43,029 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:45:43,035 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-25 00:45:43,075 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-25 00:45:43,082 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4165712d90> has no local changes
2024-11-25 00:45:43,083 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-fpbioimage
Updating e5b3ca3..3b6c05a
Previously merged:
- PR 30 jburel 'Build'
Merged PRs:
- PR 18 jburel 'default size z value'
Generated by OMERO-plugins-push#257 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/)'
2024-11-25 00:45:43,091 [ scc.git] DEBUG [detached HEAD ed9d87c] merge master -Dorg -Ssuccess-only
2024-11-25 00:45:43,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:45:43,092 [ scc.repo] DEBUG ## PRs found:
2024-11-25 00:45:43,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None
2024-11-25 00:45:43,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/112 HTTP/1.1" 200 None
2024-11-25 00:45:44,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/54df1054c2422d028a55d54c0a412c2568656a42 HTTP/1.1" 200 None
2024-11-25 00:45:44,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/54df1054c2422d028a55d54c0a412c2568656a42/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-25 00:45:45,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/54df1054c2422d028a55d54c0a412c2568656a42/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-25 00:45:45,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/54df1054c2422d028a55d54c0a412c2568656a42 HTTP/1.1" 200 None
2024-11-25 00:45:46,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/54df1054c2422d028a55d54c0a412c2568656a42?per_page=1 HTTP/1.1" 200 2
2024-11-25 00:45:46,376 [ scc.repo] DEBUG - PR 112 jburel 'Build'
2024-11-25 00:45:46,376 [ scc.repo] DEBUG ## Branches found:
2024-11-25 00:45:46,376 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-11-25 00:45:46,376 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:45:46,376 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:45:46,383 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-25 00:45:46,389 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-25 00:45:46,389 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-25 00:45:46,395 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-25 00:45:46,402 [ scc.git] DEBUG Already up to date.
2024-11-25 00:45:46,402 [ scc.git] DEBUG Calling 'git fetch origin pull/112/head'
2024-11-25 00:45:47,196 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-11-25 00:45:47,196 [ scc.git] DEBUG * branch refs/pull/112/head -> FETCH_HEAD
2024-11-25 00:45:47,201 [ scc.git] DEBUG ## Unique users: []
2024-11-25 00:45:47,201 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:45:47,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:45:47,207 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...54df1054c2422d028a55d54c0a412c2568656a42'
2024-11-25 00:45:47,213 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:45:47,218 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 112 (Build) 54df1054c2422d028a55d54c0a412c2568656a42'
2024-11-25 00:45:47,237 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-25 00:45:47,240 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +-
2024-11-25 00:45:47,240 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-11-25 00:45:47,241 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++
2024-11-25 00:45:47,241 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-)
2024-11-25 00:45:47,241 [ scc.git] DEBUG create mode 100755 .omeroci/app-build
2024-11-25 00:45:47,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:45:47,382 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-25 00:45:47,422 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:45:47,422 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:45:47,427 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-25 00:45:47,466 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-25 00:45:47,472 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4165747eb0> has no local changes
2024-11-25 00:45:47,473 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 112 jburel 'Build'
Generated by OMERO-plugins-push#257 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/)'
2024-11-25 00:45:47,482 [ scc.git] DEBUG [detached HEAD 29d27eb] merge master -Dorg -Ssuccess-only
2024-11-25 00:45:47,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:45:47,482 [ scc.repo] DEBUG ## PRs found:
2024-11-25 00:45:47,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None
2024-11-25 00:45:48,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None
2024-11-25 00:45:48,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None
2024-11-25 00:45:49,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/496 HTTP/1.1" 200 None
2024-11-25 00:45:49,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/496/comments HTTP/1.1" 200 None
2024-11-25 00:45:50,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2be10ae76782b80eec916a57ba8656bf0a476b24 HTTP/1.1" 200 None
2024-11-25 00:45:50,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2be10ae76782b80eec916a57ba8656bf0a476b24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-25 00:45:51,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2be10ae76782b80eec916a57ba8656bf0a476b24/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-25 00:45:51,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2be10ae76782b80eec916a57ba8656bf0a476b24 HTTP/1.1" 200 None
2024-11-25 00:45:52,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/2be10ae76782b80eec916a57ba8656bf0a476b24?per_page=1 HTTP/1.1" 200 2
2024-11-25 00:45:52,115 [ scc.repo] DEBUG - PR 496 will-moore 'Add changelog 0.15.0'
2024-11-25 00:45:52,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/488 HTTP/1.1" 200 None
2024-11-25 00:45:53,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/488/comments HTTP/1.1" 200 None
2024-11-25 00:45:53,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/46876715237b60135f18444520e68ee442dd0461 HTTP/1.1" 200 None
2024-11-25 00:45:54,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/46876715237b60135f18444520e68ee442dd0461/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-25 00:45:54,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/46876715237b60135f18444520e68ee442dd0461/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-25 00:45:55,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/46876715237b60135f18444520e68ee442dd0461 HTTP/1.1" 200 None
2024-11-25 00:45:55,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/46876715237b60135f18444520e68ee442dd0461?per_page=1 HTTP/1.1" 200 2
2024-11-25 00:45:55,405 [ scc.repo] DEBUG - PR 488 will-moore 'Mobile layout'
2024-11-25 00:45:55,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None
2024-11-25 00:45:56,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None
2024-11-25 00:45:56,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-11-25 00:45:57,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-25 00:45:57,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-25 00:45:58,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-11-25 00:45:58,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2
2024-11-25 00:45:58,661 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip'
2024-11-25 00:45:59,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None
2024-11-25 00:45:59,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None
2024-11-25 00:46:00,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-11-25 00:46:00,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-25 00:46:01,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-25 00:46:01,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-11-25 00:46:01,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2
2024-11-25 00:46:01,997 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure'
2024-11-25 00:46:02,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None
2024-11-25 00:46:02,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None
2024-11-25 00:46:03,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-11-25 00:46:03,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-25 00:46:04,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-11-25 00:46:04,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2
2024-11-25 00:46:04,896 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix'
2024-11-25 00:46:04,897 [ scc.repo] DEBUG ## Branches found:
2024-11-25 00:46:04,897 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-11-25 00:46:04,897 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:46:04,897 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:04,904 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-25 00:46:04,909 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-25 00:46:04,909 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-25 00:46:04,919 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-25 00:46:04,925 [ scc.git] DEBUG Already up to date.
2024-11-25 00:46:04,926 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head'
2024-11-25 00:46:05,548 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-11-25 00:46:05,548 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD
2024-11-25 00:46:05,553 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head'
2024-11-25 00:46:07,447 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-11-25 00:46:07,447 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD
2024-11-25 00:46:07,452 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head'
2024-11-25 00:46:07,850 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-11-25 00:46:07,850 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD
2024-11-25 00:46:07,854 [ scc.git] DEBUG Calling 'git fetch origin pull/488/head'
2024-11-25 00:46:09,853 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-11-25 00:46:09,853 [ scc.git] DEBUG * branch refs/pull/488/head -> FETCH_HEAD
2024-11-25 00:46:09,856 [ scc.git] DEBUG Calling 'git fetch origin pull/496/head'
2024-11-25 00:46:10,429 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-11-25 00:46:10,430 [ scc.git] DEBUG * branch refs/pull/496/head -> FETCH_HEAD
2024-11-25 00:46:10,435 [ scc.git] DEBUG ## Unique users: []
2024-11-25 00:46:10,435 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:46:10,435 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:10,443 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-11-25 00:46:10,451 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:10,456 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-11-25 00:46:10,507 [ scc.git] DEBUG Auto-merging src/model/image_info.js
2024-11-25 00:46:10,507 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-25 00:46:10,511 [ scc.git] DEBUG src/model/image_info.js | 7 ++++---
2024-11-25 00:46:10,511 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++-
2024-11-25 00:46:10,511 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-)
2024-11-25 00:46:10,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:46:10,663 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd'
2024-11-25 00:46:10,673 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:10,679 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd'
2024-11-25 00:46:10,753 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py
2024-11-25 00:46:10,753 [ scc.git] DEBUG Auto-merging src/app/context.js
2024-11-25 00:46:10,753 [ scc.git] DEBUG Auto-merging src/utils/constants.js
2024-11-25 00:46:10,753 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js
2024-11-25 00:46:10,761 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-25 00:46:10,766 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++-
2024-11-25 00:46:10,766 [ scc.git] DEBUG src/app/context.js | 6 +-
2024-11-25 00:46:10,766 [ scc.git] DEBUG src/app/header.html | 5 +
2024-11-25 00:46:10,766 [ scc.git] DEBUG src/app/header.js | 45 ++++++++-
2024-11-25 00:46:10,766 [ scc.git] DEBUG src/utils/constants.js | 6 ++
2024-11-25 00:46:10,766 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++
2024-11-25 00:46:10,766 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-)
2024-11-25 00:46:10,766 [ scc.git] DEBUG create mode 100644 src/utils/figure.js
2024-11-25 00:46:11,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:46:11,053 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9'
2024-11-25 00:46:11,061 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:11,066 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9'
2024-11-25 00:46:11,364 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js
2024-11-25 00:46:11,366 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-25 00:46:11,369 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +-
2024-11-25 00:46:11,369 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++
2024-11-25 00:46:11,369 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-)
2024-11-25 00:46:11,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:46:11,518 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...46876715237b60135f18444520e68ee442dd0461'
2024-11-25 00:46:11,528 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:11,534 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 488 (Mobile layout) 46876715237b60135f18444520e68ee442dd0461'
2024-11-25 00:46:11,706 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-25 00:46:11,711 [ scc.git] DEBUG css/app.css | 109 ++++++++++++++++++++++++-------
2024-11-25 00:46:11,711 [ scc.git] DEBUG src/app/index.html | 4 +-
2024-11-25 00:46:11,711 [ scc.git] DEBUG src/app/thumbnail-slider.html | 6 +-
2024-11-25 00:46:11,711 [ scc.git] DEBUG src/app/thumbnail-slider.js | 18 ++---
2024-11-25 00:46:11,711 [ scc.git] DEBUG src/index-dev.html | 1 +
2024-11-25 00:46:11,711 [ scc.git] DEBUG src/index.html | 1 +
2024-11-25 00:46:11,711 [ scc.git] DEBUG src/utils/ui.js | 148 ++++++++++++++----------------------------
2024-11-25 00:46:11,712 [ scc.git] DEBUG src/viewers/ol3-viewer.js | 4 --
2024-11-25 00:46:11,712 [ scc.git] DEBUG 8 files changed, 151 insertions(+), 140 deletions(-)
2024-11-25 00:46:11,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:46:11,907 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2be10ae76782b80eec916a57ba8656bf0a476b24'
2024-11-25 00:46:11,916 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:11,922 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 496 (Add changelog 0.15.0) 2be10ae76782b80eec916a57ba8656bf0a476b24'
2024-11-25 00:46:12,030 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-25 00:46:12,033 [ scc.git] DEBUG CHANGELOG.md | 9 +++++++++
2024-11-25 00:46:12,033 [ scc.git] DEBUG 1 file changed, 9 insertions(+)
2024-11-25 00:46:12,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:46:12,295 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-25 00:46:12,339 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:46:12,339 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:12,347 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-25 00:46:12,385 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-25 00:46:12,392 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4164698580> has no local changes
2024-11-25 00:46:12,393 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-iviewer
Excluded PRs:
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Already up to date.
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 488 will-moore 'Mobile layout'
- PR 496 will-moore 'Add changelog 0.15.0'
Generated by OMERO-plugins-push#257 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/)'
2024-11-25 00:46:12,409 [ scc.git] DEBUG [detached HEAD afc5723] merge master -Dorg -Ssuccess-only
2024-11-25 00:46:12,410 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:46:12,410 [ scc.repo] DEBUG ## PRs found:
2024-11-25 00:46:13,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2024-11-25 00:46:13,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/93 HTTP/1.1" 200 None
2024-11-25 00:46:14,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/93/comments HTTP/1.1" 200 None
2024-11-25 00:46:14,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/8bf7fcc622131bba16a86c21bf4076a1468b33e5 HTTP/1.1" 200 None
2024-11-25 00:46:15,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/8bf7fcc622131bba16a86c21bf4076a1468b33e5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-25 00:46:15,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/8bf7fcc622131bba16a86c21bf4076a1468b33e5/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-25 00:46:16,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/8bf7fcc622131bba16a86c21bf4076a1468b33e5 HTTP/1.1" 200 None
2024-11-25 00:46:16,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/8bf7fcc622131bba16a86c21bf4076a1468b33e5?per_page=1 HTTP/1.1" 200 2
2024-11-25 00:46:16,604 [ scc.repo] DEBUG - PR 93 will-moore 'changelog 0.5.3'
2024-11-25 00:46:17,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2024-11-25 00:46:17,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2024-11-25 00:46:18,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-11-25 00:46:18,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-25 00:46:19,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-11-25 00:46:19,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2024-11-25 00:46:19,436 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2024-11-25 00:46:19,437 [ scc.repo] DEBUG ## Branches found:
2024-11-25 00:46:19,437 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-11-25 00:46:19,437 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:46:19,437 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:19,444 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-25 00:46:19,451 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-25 00:46:19,451 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-25 00:46:19,458 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-25 00:46:19,465 [ scc.git] DEBUG Already up to date.
2024-11-25 00:46:19,465 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2024-11-25 00:46:19,846 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2024-11-25 00:46:19,846 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2024-11-25 00:46:19,850 [ scc.git] DEBUG Calling 'git fetch origin pull/93/head'
2024-11-25 00:46:20,254 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2024-11-25 00:46:20,254 [ scc.git] DEBUG * branch refs/pull/93/head -> FETCH_HEAD
2024-11-25 00:46:20,259 [ scc.git] DEBUG ## Unique users: []
2024-11-25 00:46:20,259 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:46:20,259 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:20,265 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-11-25 00:46:20,272 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:20,277 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-11-25 00:46:20,289 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-25 00:46:20,292 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2024-11-25 00:46:20,292 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2024-11-25 00:46:20,292 [ scc.git] DEBUG requirements.txt | 2 +-
2024-11-25 00:46:20,292 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2024-11-25 00:46:20,292 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2024-11-25 00:46:20,292 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2024-11-25 00:46:20,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:46:20,445 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8bf7fcc622131bba16a86c21bf4076a1468b33e5'
2024-11-25 00:46:20,453 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:20,458 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 93 (changelog 0.5.3) 8bf7fcc622131bba16a86c21bf4076a1468b33e5'
2024-11-25 00:46:20,473 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-25 00:46:20,475 [ scc.git] DEBUG CHANGELOG.md | 12 ++++++++++++
2024-11-25 00:46:20,475 [ scc.git] DEBUG 1 file changed, 12 insertions(+)
2024-11-25 00:46:20,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:46:20,841 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-25 00:46:20,885 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:46:20,886 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:20,893 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-25 00:46:20,934 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-25 00:46:20,941 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41646aa6a0> has no local changes
2024-11-25 00:46:20,941 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 93 will-moore 'changelog 0.5.3'
Generated by OMERO-plugins-push#257 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/)'
2024-11-25 00:46:20,952 [ scc.git] DEBUG [detached HEAD 97a92ca] merge master -Dorg -Ssuccess-only
2024-11-25 00:46:20,953 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:46:20,953 [ scc.repo] DEBUG ## PRs found:
2024-11-25 00:46:21,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2024-11-25 00:46:21,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/89 HTTP/1.1" 200 None
2024-11-25 00:46:22,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175 HTTP/1.1" 200 None
2024-11-25 00:46:22,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-25 00:46:23,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-25 00:46:23,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175 HTTP/1.1" 200 None
2024-11-25 00:46:24,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/dfc227486da13c78bc278fc534e59b40cbc97175?per_page=1 HTTP/1.1" 200 2
2024-11-25 00:46:24,073 [ scc.repo] DEBUG - PR 89 jburel 'Build'
2024-11-25 00:46:24,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2024-11-25 00:46:25,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2024-11-25 00:46:25,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-11-25 00:46:26,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-25 00:46:26,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-11-25 00:46:26,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2024-11-25 00:46:26,970 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-11-25 00:46:27,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2024-11-25 00:46:27,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2024-11-25 00:46:28,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-11-25 00:46:28,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-25 00:46:29,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-11-25 00:46:29,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2024-11-25 00:46:29,767 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-11-25 00:46:29,767 [ scc.repo] DEBUG ## Branches found:
2024-11-25 00:46:29,767 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-11-25 00:46:29,767 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:46:29,767 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:29,773 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-25 00:46:29,780 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-25 00:46:29,780 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-25 00:46:29,786 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-25 00:46:29,793 [ scc.git] DEBUG Already up to date.
2024-11-25 00:46:29,794 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2024-11-25 00:46:30,498 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-11-25 00:46:30,499 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2024-11-25 00:46:30,504 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2024-11-25 00:46:31,082 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-11-25 00:46:31,083 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2024-11-25 00:46:31,088 [ scc.git] DEBUG Calling 'git fetch origin pull/89/head'
2024-11-25 00:46:31,623 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-11-25 00:46:31,623 [ scc.git] DEBUG * branch refs/pull/89/head -> FETCH_HEAD
2024-11-25 00:46:31,629 [ scc.git] DEBUG ## Unique users: []
2024-11-25 00:46:31,629 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:46:31,629 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:31,634 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-11-25 00:46:31,641 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:31,647 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-11-25 00:46:31,923 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2024-11-25 00:46:31,924 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2024-11-25 00:46:31,924 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-11-25 00:46:31,924 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-11-25 00:46:31,924 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-11-25 00:46:31,925 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-11-25 00:46:31,931 [ scc.git] DEBUG Calling 'git reset --hard fc2095901f5dfd24ecd29a99092283f136de04d5'
2024-11-25 00:46:31,939 [ scc.git] DEBUG HEAD is now at fc20959 Bump version: 0.13.0 → 0.13.1.dev0
2024-11-25 00:46:32,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:46:32,081 [ scc.git] DEBUG Calling 'git merge-base fc2095901f5dfd24ecd29a99092283f136de04d5 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-11-25 00:46:32,090 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..fc2095901f5dfd24ecd29a99092283f136de04d5'
2024-11-25 00:46:32,339 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#257](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/populate.py
- src/omero_metadata/cli.py
--conflicts
2024-11-25 00:46:32,345 [ scc.config] DEBUG Found github.token
2024-11-25 00:46:32,346 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2024-11-25 00:46:32,346 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2024-11-25 00:46:32,353 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:32,359 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2024-11-25 00:46:32,401 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-11-25 00:46:32,401 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-11-25 00:46:32,401 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2024-11-25 00:46:32,401 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-11-25 00:46:32,402 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-11-25 00:46:32,408 [ scc.git] DEBUG Calling 'git reset --hard fc2095901f5dfd24ecd29a99092283f136de04d5'
2024-11-25 00:46:32,416 [ scc.git] DEBUG HEAD is now at fc20959 Bump version: 0.13.0 → 0.13.1.dev0
2024-11-25 00:46:32,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:46:32,559 [ scc.git] DEBUG Calling 'git merge-base fc2095901f5dfd24ecd29a99092283f136de04d5 78e55539b68e351ed5ef202854718b49a37729a7'
2024-11-25 00:46:32,567 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..fc2095901f5dfd24ecd29a99092283f136de04d5'
2024-11-25 00:46:32,572 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#257](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2024-11-25 00:46:32,578 [ scc.config] DEBUG Found github.token
2024-11-25 00:46:32,578 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2024-11-25 00:46:32,578 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dfc227486da13c78bc278fc534e59b40cbc97175'
2024-11-25 00:46:32,584 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:32,590 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 89 (Build) dfc227486da13c78bc278fc534e59b40cbc97175'
2024-11-25 00:46:32,612 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-25 00:46:32,615 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-11-25 00:46:32,615 [ scc.git] DEBUG 1 file changed, 7 insertions(+), 5 deletions(-)
2024-11-25 00:46:32,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:46:32,958 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-25 00:46:33,000 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:46:33,000 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:33,006 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-25 00:46:33,044 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-25 00:46:33,053 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4164651730> has no local changes
2024-11-25 00:46:33,053 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Already up to date.
Merged PRs:
- PR 89 jburel 'Build'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#257 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/)'
2024-11-25 00:46:33,062 [ scc.git] DEBUG [detached HEAD 75d3d84] merge master -Dorg -Ssuccess-only
2024-11-25 00:46:33,063 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:46:33,063 [ scc.repo] DEBUG ## PRs found:
2024-11-25 00:46:33,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2024-11-25 00:46:33,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2024-11-25 00:46:34,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2024-11-25 00:46:34,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2024-11-25 00:46:35,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2024-11-25 00:46:35,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2024-11-25 00:46:36,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2024-11-25 00:46:36,358 [ scc.repo] DEBUG ## Branches found:
2024-11-25 00:46:36,358 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-11-25 00:46:36,358 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:46:36,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:36,364 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-25 00:46:36,369 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-25 00:46:36,369 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-25 00:46:36,374 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-25 00:46:36,387 [ scc.git] DEBUG Updating 5d441c2..fb5ae86
2024-11-25 00:46:36,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/133 HTTP/1.1" 200 None
2024-11-25 00:46:37,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/129 HTTP/1.1" 200 None
2024-11-25 00:46:38,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/131 HTTP/1.1" 200 None
2024-11-25 00:46:38,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/128 HTTP/1.1" 200 None
2024-11-25 00:46:38,718 [ scc.git] DEBUG ## Unique users: []
2024-11-25 00:46:38,718 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:46:38,718 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:38,724 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-25 00:46:38,766 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:46:38,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:38,773 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-25 00:46:38,815 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-25 00:46:38,823 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4164651610> has no local changes
2024-11-25 00:46:38,824 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Updating 5d441c2..fb5ae86
Previously merged:
- PR 133 jburel 'Build'
- PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
- PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
- PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
Generated by OMERO-plugins-push#257 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/)'
2024-11-25 00:46:38,833 [ scc.git] DEBUG [detached HEAD 968c0ed] merge master -Dorg -Ssuccess-only
2024-11-25 00:46:38,833 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:46:38,834 [ scc.repo] DEBUG ## PRs found:
2024-11-25 00:46:39,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None
2024-11-25 00:46:39,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/15 HTTP/1.1" 200 None
2024-11-25 00:46:40,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332 HTTP/1.1" 200 None
2024-11-25 00:46:40,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-25 00:46:41,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-25 00:46:41,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None
2024-11-25 00:46:42,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-11-25 00:46:42,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-25 00:46:43,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-11-25 00:46:43,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2
2024-11-25 00:46:43,422 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel'
2024-11-25 00:46:43,422 [ scc.repo] DEBUG ## Branches found:
2024-11-25 00:46:43,422 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-11-25 00:46:43,422 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:46:43,422 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:43,430 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-25 00:46:43,435 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-25 00:46:43,435 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-25 00:46:43,440 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-25 00:46:43,446 [ scc.git] DEBUG Already up to date.
2024-11-25 00:46:43,446 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-11-25 00:46:43,766 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools
2024-11-25 00:46:43,767 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2024-11-25 00:46:43,771 [ scc.git] DEBUG ## Unique users: []
2024-11-25 00:46:43,771 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:46:43,772 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:43,779 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-11-25 00:46:43,784 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:43,789 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-11-25 00:46:43,798 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-25 00:46:43,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:46:43,951 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-25 00:46:43,992 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:46:43,992 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:43,998 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-25 00:46:44,036 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-25 00:46:44,043 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4164696c70> has no local changes
2024-11-25 00:46:44,043 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Excluded PRs:
- PR 15 jburel 'Build' (status: failure)
Already up to date.
Merged PRs:
- PR 14 jburel 'use conda-forge channel'
Generated by OMERO-plugins-push#257 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/)'
2024-11-25 00:46:44,051 [ scc.git] DEBUG [detached HEAD f84f407] merge master -Dorg -Ssuccess-only
2024-11-25 00:46:44,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:46:44,052 [ scc.repo] DEBUG ## PRs found:
2024-11-25 00:46:44,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2024-11-25 00:46:44,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/29 HTTP/1.1" 200 None
2024-11-25 00:46:45,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None
2024-11-25 00:46:45,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-25 00:46:46,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None
2024-11-25 00:46:46,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24?per_page=1 HTTP/1.1" 200 None
2024-11-25 00:46:47,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None
2024-11-25 00:46:47,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/status HTTP/1.1" 200 None
2024-11-25 00:46:47,745 [ scc.repo] DEBUG - PR 29 jburel 'Build'
2024-11-25 00:46:48,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None
2024-11-25 00:46:48,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None
2024-11-25 00:46:49,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None
2024-11-25 00:46:49,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-11-25 00:46:50,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-25 00:46:50,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-11-25 00:46:50,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2
2024-11-25 00:46:50,882 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-11-25 00:46:50,882 [ scc.repo] DEBUG ## Branches found:
2024-11-25 00:46:50,882 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-11-25 00:46:50,882 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:46:50,882 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:50,888 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-25 00:46:50,893 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-25 00:46:50,893 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-25 00:46:50,898 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-25 00:46:50,904 [ scc.git] DEBUG Already up to date.
2024-11-25 00:46:50,904 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head'
2024-11-25 00:46:51,373 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2024-11-25 00:46:51,373 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD
2024-11-25 00:46:51,378 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head'
2024-11-25 00:46:51,994 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2024-11-25 00:46:51,994 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD
2024-11-25 00:46:51,999 [ scc.git] DEBUG ## Unique users: []
2024-11-25 00:46:51,999 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:46:51,999 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:52,005 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61'
2024-11-25 00:46:52,012 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:52,017 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61'
2024-11-25 00:46:52,029 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py
2024-11-25 00:46:52,029 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-25 00:46:52,032 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++
2024-11-25 00:46:52,032 [ scc.git] DEBUG 1 file changed, 33 insertions(+)
2024-11-25 00:46:52,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:46:52,176 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24'
2024-11-25 00:46:52,183 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:52,189 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Build) 92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24'
2024-11-25 00:46:52,300 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-25 00:46:52,303 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +-
2024-11-25 00:46:52,303 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-11-25 00:46:52,303 [ scc.git] DEBUG 2 files changed, 8 insertions(+), 6 deletions(-)
2024-11-25 00:46:52,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:46:52,568 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-25 00:46:52,621 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:46:52,621 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:52,628 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-25 00:46:52,672 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-25 00:46:52,681 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41646bcca0> has no local changes
2024-11-25 00:46:52,681 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 6 dominikl 'Add method to create masks grouped by label id'
- PR 29 jburel 'Build'
Generated by OMERO-plugins-push#257 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/)'
2024-11-25 00:46:52,692 [ scc.git] DEBUG [detached HEAD 90c0073] merge master -Dorg -Ssuccess-only
2024-11-25 00:46:52,693 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:46:52,693 [ scc.repo] DEBUG ## PRs found:
2024-11-25 00:46:53,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2024-11-25 00:46:53,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/21 HTTP/1.1" 200 None
2024-11-25 00:46:54,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1 HTTP/1.1" 200 None
2024-11-25 00:46:54,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-25 00:46:55,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-25 00:46:55,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1 HTTP/1.1" 200 None
2024-11-25 00:46:56,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1?per_page=1 HTTP/1.1" 200 2
2024-11-25 00:46:56,151 [ scc.repo] DEBUG - PR 21 jburel 'Build'
2024-11-25 00:46:56,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2024-11-25 00:46:57,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2024-11-25 00:46:57,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-11-25 00:46:58,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-25 00:46:58,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-11-25 00:46:59,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2024-11-25 00:46:59,047 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2024-11-25 00:46:59,047 [ scc.repo] DEBUG ## Branches found:
2024-11-25 00:46:59,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-11-25 00:46:59,048 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:46:59,048 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:46:59,054 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-25 00:46:59,060 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-25 00:46:59,060 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-25 00:46:59,066 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-25 00:46:59,072 [ scc.git] DEBUG Already up to date.
2024-11-25 00:46:59,072 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-11-25 00:46:59,446 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2024-11-25 00:46:59,447 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2024-11-25 00:46:59,451 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head'
2024-11-25 00:47:00,504 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2024-11-25 00:47:00,504 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD
2024-11-25 00:47:00,511 [ scc.git] DEBUG ## Unique users: []
2024-11-25 00:47:00,511 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:47:00,511 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:00,518 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-11-25 00:47:00,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:00,529 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-11-25 00:47:00,588 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2024-11-25 00:47:00,588 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2024-11-25 00:47:00,588 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2024-11-25 00:47:00,588 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2024-11-25 00:47:00,588 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2024-11-25 00:47:00,588 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2024-11-25 00:47:00,588 [ scc.git] DEBUG Auto-merging setup.py
2024-11-25 00:47:00,588 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2024-11-25 00:47:00,588 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-11-25 00:47:00,589 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-11-25 00:47:00,595 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319'
2024-11-25 00:47:00,602 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0
2024-11-25 00:47:00,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:00,747 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-11-25 00:47:00,753 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319'
2024-11-25 00:47:00,759 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#257](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_signup/urls.py
- omero_signup/signup_settings.py
- omero_signup/views.py
- setup.py
--conflicts
2024-11-25 00:47:00,765 [ scc.config] DEBUG Found github.token
2024-11-25 00:47:00,765 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2024-11-25 00:47:00,765 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8cd79097b8e36aef506d1589aa1bc281a0fc1b1'
2024-11-25 00:47:00,772 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:00,777 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Build) d8cd79097b8e36aef506d1589aa1bc281a0fc1b1'
2024-11-25 00:47:00,792 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-25 00:47:00,795 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +-
2024-11-25 00:47:00,795 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-11-25 00:47:00,795 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++
2024-11-25 00:47:00,795 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-)
2024-11-25 00:47:00,795 [ scc.git] DEBUG create mode 100755 .omeroci/app-build
2024-11-25 00:47:01,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:01,132 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-25 00:47:01,179 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:47:01,179 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:01,185 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-25 00:47:01,226 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-25 00:47:01,233 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41646b5a60> has no local changes
2024-11-25 00:47:01,233 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 21 jburel 'Build'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#257 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/)'
2024-11-25 00:47:01,241 [ scc.git] DEBUG [detached HEAD 6d65697] merge master -Dorg -Ssuccess-only
2024-11-25 00:47:01,241 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:01,241 [ scc.repo] DEBUG ## PRs found:
2024-11-25 00:47:01,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2024-11-25 00:47:02,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2024-11-25 00:47:02,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2024-11-25 00:47:03,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-11-25 00:47:03,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-25 00:47:04,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-11-25 00:47:04,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2024-11-25 00:47:04,434 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-11-25 00:47:04,434 [ scc.repo] DEBUG ## Branches found:
2024-11-25 00:47:04,434 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-11-25 00:47:04,434 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:47:04,434 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:04,440 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-25 00:47:04,445 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-25 00:47:04,445 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-25 00:47:04,450 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-25 00:47:04,455 [ scc.git] DEBUG Already up to date.
2024-11-25 00:47:04,456 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2024-11-25 00:47:04,818 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2024-11-25 00:47:04,818 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD
2024-11-25 00:47:04,823 [ scc.git] DEBUG ## Unique users: []
2024-11-25 00:47:04,823 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:47:04,823 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:04,829 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2024-11-25 00:47:04,837 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:04,842 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2024-11-25 00:47:04,887 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-25 00:47:04,890 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++
2024-11-25 00:47:04,890 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++
2024-11-25 00:47:04,890 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++
2024-11-25 00:47:04,890 [ scc.git] DEBUG idr/70-reset-password.sh | 1 +
2024-11-25 00:47:04,890 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 +
2024-11-25 00:47:04,890 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 +
2024-11-25 00:47:04,890 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++
2024-11-25 00:47:04,890 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++
2024-11-25 00:47:04,890 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++
2024-11-25 00:47:04,890 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2024-11-25 00:47:04,890 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++
2024-11-25 00:47:04,890 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++
2024-11-25 00:47:04,892 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++
2024-11-25 00:47:04,892 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++
2024-11-25 00:47:04,892 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++
2024-11-25 00:47:04,892 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++
2024-11-25 00:47:04,892 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++
2024-11-25 00:47:04,893 [ scc.git] DEBUG idr/omero/Dockerfile | 3 +
2024-11-25 00:47:04,893 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++
2024-11-25 00:47:04,893 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++
2024-11-25 00:47:04,893 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++
2024-11-25 00:47:04,893 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++
2024-11-25 00:47:04,893 [ scc.git] DEBUG 22 files changed, 824 insertions(+)
2024-11-25 00:47:04,893 [ scc.git] DEBUG create mode 100644 idr-compose.yml
2024-11-25 00:47:04,893 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml
2024-11-25 00:47:04,893 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh
2024-11-25 00:47:04,893 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh
2024-11-25 00:47:04,893 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf
2024-11-25 00:47:04,893 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf
2024-11-25 00:47:04,893 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2024-11-25 00:47:04,893 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2024-11-25 00:47:04,893 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf
2024-11-25 00:47:04,893 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2024-11-25 00:47:04,893 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2024-11-25 00:47:04,893 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2024-11-25 00:47:04,893 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2024-11-25 00:47:04,893 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2024-11-25 00:47:04,893 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2024-11-25 00:47:04,893 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2024-11-25 00:47:04,893 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf
2024-11-25 00:47:04,893 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile
2024-11-25 00:47:04,893 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml
2024-11-25 00:47:04,893 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile
2024-11-25 00:47:04,893 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile
2024-11-25 00:47:04,893 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml
2024-11-25 00:47:05,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:05,022 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-25 00:47:05,064 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:47:05,064 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:05,070 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-25 00:47:05,110 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-25 00:47:05,118 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f416461cbe0> has no local changes
2024-11-25 00:47:05,118 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
Generated by OMERO-plugins-push#257 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/)'
2024-11-25 00:47:05,127 [ scc.git] DEBUG [detached HEAD c4097a7] merge master -Dorg -Ssuccess-only
2024-11-25 00:47:05,128 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:05,128 [ scc.repo] DEBUG ## PRs found:
2024-11-25 00:47:05,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2
2024-11-25 00:47:05,436 [ scc.repo] DEBUG ## Branches found:
2024-11-25 00:47:05,436 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-11-25 00:47:05,437 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:47:05,437 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:05,442 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-25 00:47:05,447 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-25 00:47:05,447 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-25 00:47:05,453 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-25 00:47:05,463 [ scc.git] DEBUG Updating aca9e9c..100f6ae
2024-11-25 00:47:06,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls/13 HTTP/1.1" 200 None
2024-11-25 00:47:06,031 [ scc.git] DEBUG ## Unique users: []
2024-11-25 00:47:06,031 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:47:06,031 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:06,038 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-25 00:47:06,076 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:47:06,076 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:06,082 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-25 00:47:06,121 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-25 00:47:06,128 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41656ddf10> has no local changes
2024-11-25 00:47:06,128 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Updating aca9e9c..100f6ae
Previously merged:
- PR 13 jburel 'Build'
Generated by OMERO-plugins-push#257 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/)'
2024-11-25 00:47:06,138 [ scc.git] DEBUG [detached HEAD 2fdfb42] merge master -Dorg -Ssuccess-only
2024-11-25 00:47:06,138 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:06,138 [ scc.repo] DEBUG ## PRs found:
2024-11-25 00:47:06,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None
2024-11-25 00:47:06,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20 HTTP/1.1" 200 None
2024-11-25 00:47:07,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/7c51ced716d1ddf611131f23665ef14f262047fe HTTP/1.1" 200 None
2024-11-25 00:47:08,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/7c51ced716d1ddf611131f23665ef14f262047fe/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-25 00:47:08,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/7c51ced716d1ddf611131f23665ef14f262047fe/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-25 00:47:08,558 [ scc.repo] DEBUG ## Branches found:
2024-11-25 00:47:08,558 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-11-25 00:47:08,558 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:47:08,558 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:08,564 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-25 00:47:08,569 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-25 00:47:08,569 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-25 00:47:08,575 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-25 00:47:08,581 [ scc.git] DEBUG Already up to date.
2024-11-25 00:47:08,581 [ scc.git] DEBUG ## Unique users: []
2024-11-25 00:47:08,581 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:47:08,581 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:08,586 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-25 00:47:08,627 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:47:08,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:08,633 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-25 00:47:08,674 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-25 00:47:08,680 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f416466cf10> has no local changes
2024-11-25 00:47:08,680 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Excluded PRs:
- PR 20 jburel 'Build' (status: failure)
Already up to date.
Generated by OMERO-plugins-push#257 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/)'
2024-11-25 00:47:08,688 [ scc.git] DEBUG [detached HEAD fe9f29d] merge master -Dorg -Ssuccess-only
2024-11-25 00:47:08,689 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:08,689 [ scc.git] INFO Overriding base-branch from master to main
2024-11-25 00:47:08,689 [ scc.repo] DEBUG ## PRs found:
2024-11-25 00:47:09,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2024-11-25 00:47:09,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/17 HTTP/1.1" 200 None
2024-11-25 00:47:10,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95 HTTP/1.1" 200 None
2024-11-25 00:47:10,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-25 00:47:11,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-25 00:47:11,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2024-11-25 00:47:11,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2024-11-25 00:47:12,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2024-11-25 00:47:12,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-11-25 00:47:13,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-25 00:47:13,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-11-25 00:47:14,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2024-11-25 00:47:14,248 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-11-25 00:47:14,249 [ scc.repo] DEBUG ## Branches found:
2024-11-25 00:47:14,249 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-11-25 00:47:14,249 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:47:14,249 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:14,256 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2024-11-25 00:47:14,262 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-25 00:47:14,262 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2024-11-25 00:47:14,268 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2024-11-25 00:47:14,274 [ scc.git] DEBUG Already up to date.
2024-11-25 00:47:14,275 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2024-11-25 00:47:14,744 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2024-11-25 00:47:14,744 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2024-11-25 00:47:14,749 [ scc.git] DEBUG ## Unique users: []
2024-11-25 00:47:14,750 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:47:14,750 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:14,756 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-11-25 00:47:14,761 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:14,766 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-11-25 00:47:14,827 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2024-11-25 00:47:14,827 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2024-11-25 00:47:14,827 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-11-25 00:47:14,828 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-11-25 00:47:14,834 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-11-25 00:47:14,840 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0
2024-11-25 00:47:14,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:14,974 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-11-25 00:47:14,981 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-11-25 00:47:14,987 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#257](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2024-11-25 00:47:14,993 [ scc.config] DEBUG Found github.token
2024-11-25 00:47:14,993 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2024-11-25 00:47:14,994 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-25 00:47:15,035 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:47:15,036 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:15,043 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-25 00:47:15,085 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-25 00:47:15,092 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4164689e50> has no local changes
2024-11-25 00:47:15,092 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 17 jburel 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#257 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/)'
2024-11-25 00:47:15,101 [ scc.git] DEBUG [detached HEAD 7bb10d7] merge master -Dorg -Ssuccess-only
2024-11-25 00:47:15,101 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:15,101 [ scc.repo] DEBUG ## PRs found:
2024-11-25 00:47:15,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2
2024-11-25 00:47:15,405 [ scc.repo] DEBUG ## Branches found:
2024-11-25 00:47:15,405 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-11-25 00:47:15,405 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:47:15,405 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:15,411 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-25 00:47:15,416 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-25 00:47:15,416 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-25 00:47:15,423 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-25 00:47:15,434 [ scc.git] DEBUG Updating adfa132..70b01ed
2024-11-25 00:47:16,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls/24 HTTP/1.1" 200 None
2024-11-25 00:47:16,065 [ scc.git] DEBUG ## Unique users: []
2024-11-25 00:47:16,066 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:47:16,066 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:16,071 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-25 00:47:16,120 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:47:16,121 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:16,126 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-25 00:47:16,166 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-25 00:47:16,173 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41645f3f70> has no local changes
2024-11-25 00:47:16,173 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Updating adfa132..70b01ed
Previously merged:
- PR 24 jburel 'Build'
Generated by OMERO-plugins-push#257 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/)'
2024-11-25 00:47:16,182 [ scc.git] DEBUG [detached HEAD 2a47b84] merge master -Dorg -Ssuccess-only
2024-11-25 00:47:16,182 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:16,182 [ scc.repo] DEBUG ## PRs found:
2024-11-25 00:47:16,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2
2024-11-25 00:47:16,494 [ scc.repo] DEBUG ## Branches found:
2024-11-25 00:47:16,494 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-11-25 00:47:16,494 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:47:16,494 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:16,500 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-25 00:47:16,506 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-25 00:47:16,506 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-25 00:47:16,513 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-25 00:47:16,524 [ scc.git] DEBUG Updating 8da48e1..5bfef29
2024-11-25 00:47:17,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls/36 HTTP/1.1" 200 None
2024-11-25 00:47:17,132 [ scc.git] DEBUG ## Unique users: []
2024-11-25 00:47:17,132 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:47:17,132 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:17,139 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-25 00:47:17,182 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:47:17,182 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:17,189 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-25 00:47:17,230 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-25 00:47:17,236 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4164624ee0> has no local changes
2024-11-25 00:47:17,236 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Updating 8da48e1..5bfef29
Previously merged:
- PR 36 jburel 'Build'
Generated by OMERO-plugins-push#257 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/)'
2024-11-25 00:47:17,244 [ scc.git] DEBUG [detached HEAD fcc51d1] merge master -Dorg -Ssuccess-only
2024-11-25 00:47:17,245 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:17,245 [ scc.repo] DEBUG ## PRs found:
2024-11-25 00:47:17,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2024-11-25 00:47:18,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2024-11-25 00:47:18,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2024-11-25 00:47:19,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-11-25 00:47:20,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-25 00:47:20,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-11-25 00:47:20,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2024-11-25 00:47:20,852 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2024-11-25 00:47:20,853 [ scc.repo] DEBUG ## Branches found:
2024-11-25 00:47:20,853 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-11-25 00:47:20,853 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:47:20,853 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:20,859 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-25 00:47:20,864 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-25 00:47:20,864 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-25 00:47:20,869 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-25 00:47:20,875 [ scc.git] DEBUG Already up to date.
2024-11-25 00:47:20,875 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2024-11-25 00:47:21,273 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2024-11-25 00:47:21,273 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2024-11-25 00:47:21,278 [ scc.git] DEBUG ## Unique users: []
2024-11-25 00:47:21,278 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:47:21,278 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:21,284 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-11-25 00:47:21,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:21,294 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-11-25 00:47:21,408 [ scc.git] DEBUG Auto-merging Dockerfile
2024-11-25 00:47:21,408 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2024-11-25 00:47:21,408 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-11-25 00:47:21,409 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-11-25 00:47:21,416 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-11-25 00:47:21,424 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2024-11-25 00:47:21,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:21,596 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-11-25 00:47:21,603 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-11-25 00:47:21,609 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#257](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2024-11-25 00:47:21,615 [ scc.config] DEBUG Found github.token
2024-11-25 00:47:21,615 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2024-11-25 00:47:21,615 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-25 00:47:21,657 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:47:21,657 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:21,664 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-25 00:47:21,707 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-25 00:47:21,714 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41645997f0> has no local changes
2024-11-25 00:47:21,715 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#257 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/)'
2024-11-25 00:47:21,724 [ scc.git] DEBUG [detached HEAD 1c68bdd] merge master -Dorg -Ssuccess-only
2024-11-25 00:47:21,724 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:21,724 [ scc.git] INFO Overriding base-branch from master to develop
2024-11-25 00:47:21,724 [ scc.repo] DEBUG ## PRs found:
2024-11-25 00:47:22,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-11-25 00:47:22,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-11-25 00:47:23,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2024-11-25 00:47:23,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-11-25 00:47:24,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-25 00:47:24,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-25 00:47:24,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-11-25 00:47:25,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-11-25 00:47:25,383 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-11-25 00:47:25,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-11-25 00:47:26,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-11-25 00:47:26,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545/issues/216/comments?page=2 HTTP/1.1" 200 None
2024-11-25 00:47:27,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-11-25 00:47:27,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-11-25 00:47:28,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-11-25 00:47:28,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-11-25 00:47:29,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-11-25 00:47:29,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-25 00:47:29,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-11-25 00:47:30,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-11-25 00:47:30,346 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-11-25 00:47:30,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-11-25 00:47:31,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-11-25 00:47:31,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-11-25 00:47:32,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-11-25 00:47:32,289 [ scc.repo] DEBUG ## Branches found:
2024-11-25 00:47:32,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-11-25 00:47:32,289 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:47:32,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:32,295 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-11-25 00:47:32,301 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-25 00:47:32,301 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-11-25 00:47:32,307 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-11-25 00:47:32,314 [ scc.git] DEBUG Already up to date.
2024-11-25 00:47:32,314 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-11-25 00:47:32,959 [ scc.git] DEBUG From https://github.com/ome/scripts
2024-11-25 00:47:32,959 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-11-25 00:47:32,964 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-11-25 00:47:33,553 [ scc.git] DEBUG From https://github.com/ome/scripts
2024-11-25 00:47:33,554 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-11-25 00:47:33,558 [ scc.git] DEBUG ## Unique users: []
2024-11-25 00:47:33,559 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:47:33,559 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:33,565 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-11-25 00:47:33,573 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:33,579 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-11-25 00:47:33,658 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-11-25 00:47:33,659 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-11-25 00:47:33,659 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-11-25 00:47:33,659 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-11-25 00:47:33,666 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-11-25 00:47:33,672 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-11-25 00:47:33,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:33,806 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-11-25 00:47:33,813 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-11-25 00:47:33,819 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#257](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-11-25 00:47:33,825 [ scc.config] DEBUG Found github.token
2024-11-25 00:47:33,825 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-11-25 00:47:33,826 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-11-25 00:47:33,831 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:33,837 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-11-25 00:47:33,863 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-25 00:47:33,866 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-11-25 00:47:33,866 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-11-25 00:47:34,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:34,183 [ scc.git] DEBUG Calling 'git submodule update'
2024-11-25 00:47:34,230 [ scc.git] DEBUG Get sha1 of %s
2024-11-25 00:47:34,230 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-25 00:47:34,237 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-25 00:47:34,281 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-25 00:47:34,288 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41645fccd0> has no local changes
2024-11-25 00:47:34,288 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#257 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/)'
2024-11-25 00:47:34,296 [ scc.git] DEBUG [detached HEAD 68530f7] merge master -Dorg -Ssuccess-only
2024-11-25 00:47:34,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:34,296 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-25 00:47:34,379 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2024-11-25 00:47:34,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:34,580 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2024-11-25 00:47:34,587 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2024-11-25 00:47:34,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:34,956 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2024-11-25 00:47:34,962 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2024-11-25 00:47:35,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:35,339 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2024-11-25 00:47:35,344 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2024-11-25 00:47:35,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:35,732 [ scc.config] DEBUG Found submodule.omero-figure.url
2024-11-25 00:47:36,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:36,126 [ scc.config] DEBUG Found submodule.omero-figure.branch
2024-11-25 00:47:36,131 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2024-11-25 00:47:36,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:36,519 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2024-11-25 00:47:36,524 [ scc.config] DEBUG Found submodule.omero-gallery.url
2024-11-25 00:47:36,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:36,905 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2024-11-25 00:47:36,910 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2024-11-25 00:47:37,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:37,294 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2024-11-25 00:47:37,299 [ scc.config] DEBUG Found submodule.omero-mapr.url
2024-11-25 00:47:37,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:37,675 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2024-11-25 00:47:37,681 [ scc.config] DEBUG Found submodule.omero-metadata.url
2024-11-25 00:47:38,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:38,062 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2024-11-25 00:47:38,068 [ scc.config] DEBUG Found submodule.omero-parade.url
2024-11-25 00:47:38,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:38,447 [ scc.config] DEBUG Found submodule.omero-parade.branch
2024-11-25 00:47:38,452 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2024-11-25 00:47:38,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:38,836 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2024-11-25 00:47:38,842 [ scc.config] DEBUG Found submodule.omero-rois.url
2024-11-25 00:47:39,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:39,230 [ scc.config] DEBUG Found submodule.omero-signup.url
2024-11-25 00:47:39,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:39,637 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2024-11-25 00:47:40,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:40,018 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2024-11-25 00:47:40,023 [ scc.config] DEBUG Found submodule.omero-upload.url
2024-11-25 00:47:40,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:40,401 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2024-11-25 00:47:40,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:40,792 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2024-11-25 00:47:41,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:41,170 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2024-11-25 00:47:41,175 [ scc.config] DEBUG Found submodule.omero-weberror.url
2024-11-25 00:47:41,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:41,555 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2024-11-25 00:47:41,560 [ scc.config] DEBUG Found submodule.omero-webtest.url
2024-11-25 00:47:41,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:41,942 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2024-11-25 00:47:41,948 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2024-11-25 00:47:42,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:42,373 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2024-11-25 00:47:42,379 [ scc.config] DEBUG Found submodule.scripts.url
2024-11-25 00:47:42,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-25 00:47:42,761 [ scc.config] DEBUG Found submodule.scripts.branch
2024-11-25 00:47:42,761 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-11-25 00:47:42,848 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4166ca1220> has local changes
2024-11-25 00:47:42,848 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 400 dependabot[bot] 'Bump omero-figure from `24444fe` to `e0b0d1a`'
- PR 401 dependabot[bot] 'Bump omero-iviewer from `a8f380f` to `387b490`'
- PR 402 dependabot[bot] 'Bump omero-cli-render from `173cac0` to `369753f`'
- PR 403 dependabot[bot] 'Bump omero-gallery from `56f4435` to `acd798d`'
- PR 404 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `c45d76c`'
Repository: ome/minimal-omero-client
Already up to date.
Merged PRs:
- PR 66 jburel 'Gateway 5 9 2'
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Updating 027b3e6..4777ef8
Previously merged:
- PR 27 jburel 'Build'
- PR 25 jburel 'review message'
Repository: ome/omero-cli-render
Excluded PRs:
- PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
- PR 59 will-moore 'Apply settings to Plate' (status: failure)
- PR 54 dominikl 'Change rendering settings spec' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
- PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft)
Already up to date.
Merged PRs:
- PR 67 sbesson 'omero render set: clarify help around settings for disabled channels'
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Updating 9b73dd9..11d3587
Previously merged:
- PR 165 jburel 'Build'
Merged PRs:
- PR 147 will-moore 'Name option'
Conflicting PRs (not included):
- PR 102 will-moore 'Zarr export tests'
- PR 123 will-moore 'Support export of Fileset:ID'
Repository: ome/omero-figure
Excluded PRs:
- PR 600 Rdornier 'Label on rois' (user: Rdornier)
- PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Already up to date.
Merged PRs:
- PR 578 Rdornier 'Image outline'
- PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality'
- PR 592 will-moore 'Filter owners and groups dropdown lists'
- PR 596 Tom-TBT 'Dynamic lut for figure'
- PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled'
- PR 599 Tom-TBT 'Patch label text selection and cue for dragging'
Conflicting PRs (not included):
- PR 595 Rdornier 'Rotate image panel by 90°'
Repository: ome/omero-fpbioimage
Updating e5b3ca3..3b6c05a
Previously merged:
- PR 30 jburel 'Build'
Merged PRs:
- PR 18 jburel 'default size z value'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 112 jburel 'Build'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Already up to date.
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 488 will-moore 'Mobile layout'
- PR 496 will-moore 'Add changelog 0.15.0'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 93 will-moore 'changelog 0.5.3'
Repository: ome/omero-metadata
Already up to date.
Merged PRs:
- PR 89 jburel 'Build'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Updating 5d441c2..fb5ae86
Previously merged:
- PR 133 jburel 'Build'
- PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
- PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
- PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
Repository: ome/omero-prometheus-tools
Excluded PRs:
- PR 15 jburel 'Build' (status: failure)
Already up to date.
Merged PRs:
- PR 14 jburel 'use conda-forge channel'
Repository: ome/omero-rois
Excluded PRs:
- PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 6 dominikl 'Add method to create masks grouped by label id'
- PR 29 jburel 'Build'
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 21 jburel 'Build'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
Repository: ome/omero-upload
Updating aca9e9c..100f6ae
Previously merged:
- PR 13 jburel 'Build'
Repository: ome/omero-virtual-microscope
Excluded PRs:
- PR 20 jburel 'Build' (status: failure)
Already up to date.
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 17 jburel 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Updating adfa132..70b01ed
Previously merged:
- PR 24 jburel 'Build'
Repository: openmicroscopy/omero-webtest
Updating 8da48e1..5bfef29
Previously merged:
- PR 36 jburel 'Build'
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#257 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/257/)'
2024-11-25 00:47:42,865 [ scc.git] DEBUG [detached HEAD 4d828b2] merge master -Dorg -Ssuccess-only
2024-11-25 00:47:42,865 [ scc.merge] INFO Repository: ome/omero-plugins
2024-11-25 00:47:42,865 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2024-11-25 00:47:42,865 [ scc.merge] INFO Already up to date.
2024-11-25 00:47:42,865 [ scc.merge] INFO
2024-11-25 00:47:42,865 [ scc.merge] INFO Merged PRs:
2024-11-25 00:47:42,865 [ scc.merge] INFO - PR 400 dependabot[bot] 'Bump omero-figure from `24444fe` to `e0b0d1a`'
2024-11-25 00:47:42,866 [ scc.merge] INFO - PR 401 dependabot[bot] 'Bump omero-iviewer from `a8f380f` to `387b490`'
2024-11-25 00:47:42,866 [ scc.merge] INFO - PR 402 dependabot[bot] 'Bump omero-cli-render from `173cac0` to `369753f`'
2024-11-25 00:47:42,866 [ scc.merge] INFO - PR 403 dependabot[bot] 'Bump omero-gallery from `56f4435` to `acd798d`'
2024-11-25 00:47:42,866 [ scc.merge] INFO - PR 404 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `c45d76c`'
2024-11-25 00:47:42,866 [ scc.merge] INFO
2024-11-25 00:47:42,866 [ scc.merge] INFO Repository: ome/minimal-omero-client
2024-11-25 00:47:42,866 [ scc.merge] INFO Already up to date.
2024-11-25 00:47:42,866 [ scc.merge] INFO
2024-11-25 00:47:42,866 [ scc.merge] INFO Merged PRs:
2024-11-25 00:47:42,866 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2'
2024-11-25 00:47:42,866 [ scc.merge] INFO
2024-11-25 00:47:42,866 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2024-11-25 00:47:42,866 [ scc.merge] INFO Excluded PRs:
2024-11-25 00:47:42,866 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2024-11-25 00:47:42,866 [ scc.merge] INFO Updating 027b3e6..4777ef8
2024-11-25 00:47:42,866 [ scc.merge] INFO Previously merged:
2024-11-25 00:47:42,866 [ scc.merge] INFO - PR 27 jburel 'Build'
2024-11-25 00:47:42,866 [ scc.merge] INFO - PR 25 jburel 'review message'
2024-11-25 00:47:42,866 [ scc.merge] INFO
2024-11-25 00:47:42,866 [ scc.merge] INFO
2024-11-25 00:47:42,866 [ scc.merge] INFO Repository: ome/omero-cli-render
2024-11-25 00:47:42,866 [ scc.merge] INFO Excluded PRs:
2024-11-25 00:47:42,866 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
2024-11-25 00:47:42,866 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' (status: failure)
2024-11-25 00:47:42,866 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft)
2024-11-25 00:47:42,866 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2024-11-25 00:47:42,866 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft)
2024-11-25 00:47:42,866 [ scc.merge] INFO Already up to date.
2024-11-25 00:47:42,866 [ scc.merge] INFO
2024-11-25 00:47:42,866 [ scc.merge] INFO Merged PRs:
2024-11-25 00:47:42,866 [ scc.merge] INFO - PR 67 sbesson 'omero render set: clarify help around settings for disabled channels'
2024-11-25 00:47:42,866 [ scc.merge] INFO
2024-11-25 00:47:42,866 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2024-11-25 00:47:42,866 [ scc.merge] INFO Excluded PRs:
2024-11-25 00:47:42,866 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-11-25 00:47:42,866 [ scc.merge] INFO Updating 9b73dd9..11d3587
2024-11-25 00:47:42,867 [ scc.merge] INFO Previously merged:
2024-11-25 00:47:42,867 [ scc.merge] INFO - PR 165 jburel 'Build'
2024-11-25 00:47:42,867 [ scc.merge] INFO
2024-11-25 00:47:42,867 [ scc.merge] INFO Merged PRs:
2024-11-25 00:47:42,867 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2024-11-25 00:47:42,867 [ scc.merge] INFO
2024-11-25 00:47:42,867 [ scc.merge] INFO Conflicting PRs (not included):
2024-11-25 00:47:42,867 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests'
2024-11-25 00:47:42,867 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID'
2024-11-25 00:47:42,867 [ scc.merge] INFO
2024-11-25 00:47:42,867 [ scc.merge] INFO Repository: ome/omero-figure
2024-11-25 00:47:42,867 [ scc.merge] INFO Excluded PRs:
2024-11-25 00:47:42,867 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' (user: Rdornier)
2024-11-25 00:47:42,867 [ scc.merge] INFO - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier)
2024-11-25 00:47:42,867 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment)
2024-11-25 00:47:42,867 [ scc.merge] INFO Already up to date.
2024-11-25 00:47:42,867 [ scc.merge] INFO
2024-11-25 00:47:42,867 [ scc.merge] INFO Merged PRs:
2024-11-25 00:47:42,867 [ scc.merge] INFO - PR 578 Rdornier 'Image outline'
2024-11-25 00:47:42,867 [ scc.merge] INFO - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality'
2024-11-25 00:47:42,867 [ scc.merge] INFO - PR 592 will-moore 'Filter owners and groups dropdown lists'
2024-11-25 00:47:42,867 [ scc.merge] INFO - PR 596 Tom-TBT 'Dynamic lut for figure'
2024-11-25 00:47:42,867 [ scc.merge] INFO - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled'
2024-11-25 00:47:42,867 [ scc.merge] INFO - PR 599 Tom-TBT 'Patch label text selection and cue for dragging'
2024-11-25 00:47:42,867 [ scc.merge] INFO
2024-11-25 00:47:42,867 [ scc.merge] INFO Conflicting PRs (not included):
2024-11-25 00:47:42,867 [ scc.merge] INFO - PR 595 Rdornier 'Rotate image panel by 90°'
2024-11-25 00:47:42,867 [ scc.merge] INFO
2024-11-25 00:47:42,867 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2024-11-25 00:47:42,867 [ scc.merge] INFO Updating e5b3ca3..3b6c05a
2024-11-25 00:47:42,867 [ scc.merge] INFO Previously merged:
2024-11-25 00:47:42,867 [ scc.merge] INFO - PR 30 jburel 'Build'
2024-11-25 00:47:42,867 [ scc.merge] INFO
2024-11-25 00:47:42,867 [ scc.merge] INFO Merged PRs:
2024-11-25 00:47:42,867 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2024-11-25 00:47:42,867 [ scc.merge] INFO
2024-11-25 00:47:42,868 [ scc.merge] INFO Repository: ome/omero-gallery
2024-11-25 00:47:42,868 [ scc.merge] INFO Already up to date.
2024-11-25 00:47:42,868 [ scc.merge] INFO
2024-11-25 00:47:42,868 [ scc.merge] INFO Merged PRs:
2024-11-25 00:47:42,868 [ scc.merge] INFO - PR 112 jburel 'Build'
2024-11-25 00:47:42,868 [ scc.merge] INFO
2024-11-25 00:47:42,868 [ scc.merge] INFO Repository: ome/omero-iviewer
2024-11-25 00:47:42,868 [ scc.merge] INFO Excluded PRs:
2024-11-25 00:47:42,868 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
2024-11-25 00:47:42,868 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2024-11-25 00:47:42,868 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2024-11-25 00:47:42,868 [ scc.merge] INFO Already up to date.
2024-11-25 00:47:42,868 [ scc.merge] INFO
2024-11-25 00:47:42,868 [ scc.merge] INFO Merged PRs:
2024-11-25 00:47:42,868 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2024-11-25 00:47:42,868 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2024-11-25 00:47:42,868 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2024-11-25 00:47:42,868 [ scc.merge] INFO - PR 488 will-moore 'Mobile layout'
2024-11-25 00:47:42,868 [ scc.merge] INFO - PR 496 will-moore 'Add changelog 0.15.0'
2024-11-25 00:47:42,868 [ scc.merge] INFO
2024-11-25 00:47:42,868 [ scc.merge] INFO Repository: ome/omero-mapr
2024-11-25 00:47:42,868 [ scc.merge] INFO Excluded PRs:
2024-11-25 00:47:42,868 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2024-11-25 00:47:42,868 [ scc.merge] INFO Already up to date.
2024-11-25 00:47:42,868 [ scc.merge] INFO
2024-11-25 00:47:42,868 [ scc.merge] INFO Merged PRs:
2024-11-25 00:47:42,868 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2024-11-25 00:47:42,868 [ scc.merge] INFO - PR 93 will-moore 'changelog 0.5.3'
2024-11-25 00:47:42,868 [ scc.merge] INFO
2024-11-25 00:47:42,868 [ scc.merge] INFO Repository: ome/omero-metadata
2024-11-25 00:47:42,868 [ scc.merge] INFO Already up to date.
2024-11-25 00:47:42,868 [ scc.merge] INFO
2024-11-25 00:47:42,868 [ scc.merge] INFO Merged PRs:
2024-11-25 00:47:42,868 [ scc.merge] INFO - PR 89 jburel 'Build'
2024-11-25 00:47:42,868 [ scc.merge] INFO
2024-11-25 00:47:42,868 [ scc.merge] INFO Conflicting PRs (not included):
2024-11-25 00:47:42,868 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-11-25 00:47:42,869 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-11-25 00:47:42,869 [ scc.merge] INFO
2024-11-25 00:47:42,869 [ scc.merge] INFO Repository: ome/omero-parade
2024-11-25 00:47:42,869 [ scc.merge] INFO Excluded PRs:
2024-11-25 00:47:42,869 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2024-11-25 00:47:42,869 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2024-11-25 00:47:42,869 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2024-11-25 00:47:42,869 [ scc.merge] INFO Updating 5d441c2..fb5ae86
2024-11-25 00:47:42,869 [ scc.merge] INFO Previously merged:
2024-11-25 00:47:42,869 [ scc.merge] INFO - PR 133 jburel 'Build'
2024-11-25 00:47:42,869 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
2024-11-25 00:47:42,869 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
2024-11-25 00:47:42,869 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
2024-11-25 00:47:42,869 [ scc.merge] INFO
2024-11-25 00:47:42,869 [ scc.merge] INFO
2024-11-25 00:47:42,869 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2024-11-25 00:47:42,869 [ scc.merge] INFO Excluded PRs:
2024-11-25 00:47:42,869 [ scc.merge] INFO - PR 15 jburel 'Build' (status: failure)
2024-11-25 00:47:42,869 [ scc.merge] INFO Already up to date.
2024-11-25 00:47:42,869 [ scc.merge] INFO
2024-11-25 00:47:42,869 [ scc.merge] INFO Merged PRs:
2024-11-25 00:47:42,869 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel'
2024-11-25 00:47:42,869 [ scc.merge] INFO
2024-11-25 00:47:42,869 [ scc.merge] INFO Repository: ome/omero-rois
2024-11-25 00:47:42,869 [ scc.merge] INFO Excluded PRs:
2024-11-25 00:47:42,869 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-11-25 00:47:42,869 [ scc.merge] INFO Already up to date.
2024-11-25 00:47:42,869 [ scc.merge] INFO
2024-11-25 00:47:42,869 [ scc.merge] INFO Merged PRs:
2024-11-25 00:47:42,869 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-11-25 00:47:42,869 [ scc.merge] INFO - PR 29 jburel 'Build'
2024-11-25 00:47:42,869 [ scc.merge] INFO
2024-11-25 00:47:42,869 [ scc.merge] INFO Repository: ome/omero-signup
2024-11-25 00:47:42,869 [ scc.merge] INFO Already up to date.
2024-11-25 00:47:42,869 [ scc.merge] INFO
2024-11-25 00:47:42,869 [ scc.merge] INFO Merged PRs:
2024-11-25 00:47:42,869 [ scc.merge] INFO - PR 21 jburel 'Build'
2024-11-25 00:47:42,869 [ scc.merge] INFO
2024-11-25 00:47:42,870 [ scc.merge] INFO Conflicting PRs (not included):
2024-11-25 00:47:42,870 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2024-11-25 00:47:42,870 [ scc.merge] INFO
2024-11-25 00:47:42,870 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2024-11-25 00:47:42,870 [ scc.merge] INFO Already up to date.
2024-11-25 00:47:42,870 [ scc.merge] INFO
2024-11-25 00:47:42,870 [ scc.merge] INFO Merged PRs:
2024-11-25 00:47:42,870 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-11-25 00:47:42,870 [ scc.merge] INFO
2024-11-25 00:47:42,870 [ scc.merge] INFO Repository: ome/omero-upload
2024-11-25 00:47:42,870 [ scc.merge] INFO Updating aca9e9c..100f6ae
2024-11-25 00:47:42,870 [ scc.merge] INFO Previously merged:
2024-11-25 00:47:42,870 [ scc.merge] INFO - PR 13 jburel 'Build'
2024-11-25 00:47:42,870 [ scc.merge] INFO
2024-11-25 00:47:42,870 [ scc.merge] INFO
2024-11-25 00:47:42,870 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2024-11-25 00:47:42,870 [ scc.merge] INFO Excluded PRs:
2024-11-25 00:47:42,870 [ scc.merge] INFO - PR 20 jburel 'Build' (status: failure)
2024-11-25 00:47:42,870 [ scc.merge] INFO Already up to date.
2024-11-25 00:47:42,870 [ scc.merge] INFO
2024-11-25 00:47:42,870 [ scc.merge] INFO
2024-11-25 00:47:42,870 [ scc.merge] INFO Repository: ome/omero-web-zarr
2024-11-25 00:47:42,870 [ scc.merge] INFO Excluded PRs:
2024-11-25 00:47:42,870 [ scc.merge] INFO - PR 17 jburel 'Build' (status: failure)
2024-11-25 00:47:42,870 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2024-11-25 00:47:42,870 [ scc.merge] INFO Already up to date.
2024-11-25 00:47:42,870 [ scc.merge] INFO
2024-11-25 00:47:42,870 [ scc.merge] INFO Conflicting PRs (not included):
2024-11-25 00:47:42,870 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-11-25 00:47:42,870 [ scc.merge] INFO
2024-11-25 00:47:42,870 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2024-11-25 00:47:42,870 [ scc.merge] INFO Updating adfa132..70b01ed
2024-11-25 00:47:42,870 [ scc.merge] INFO Previously merged:
2024-11-25 00:47:42,870 [ scc.merge] INFO - PR 24 jburel 'Build'
2024-11-25 00:47:42,870 [ scc.merge] INFO
2024-11-25 00:47:42,870 [ scc.merge] INFO
2024-11-25 00:47:42,871 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2024-11-25 00:47:42,871 [ scc.merge] INFO Updating 8da48e1..5bfef29
2024-11-25 00:47:42,871 [ scc.merge] INFO Previously merged:
2024-11-25 00:47:42,871 [ scc.merge] INFO - PR 36 jburel 'Build'
2024-11-25 00:47:42,871 [ scc.merge] INFO
2024-11-25 00:47:42,871 [ scc.merge] INFO
2024-11-25 00:47:42,871 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2024-11-25 00:47:42,871 [ scc.merge] INFO Already up to date.
2024-11-25 00:47:42,871 [ scc.merge] INFO
2024-11-25 00:47:42,871 [ scc.merge] INFO Conflicting PRs (not included):
2024-11-25 00:47:42,871 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2024-11-25 00:47:42,871 [ scc.merge] INFO
2024-11-25 00:47:42,871 [ scc.merge] INFO Repository: ome/scripts
2024-11-25 00:47:42,871 [ scc.merge] INFO Excluded PRs:
2024-11-25 00:47:42,871 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-11-25 00:47:42,871 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-11-25 00:47:42,871 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-11-25 00:47:42,871 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-11-25 00:47:42,871 [ scc.merge] INFO Already up to date.
2024-11-25 00:47:42,871 [ scc.merge] INFO
2024-11-25 00:47:42,871 [ scc.merge] INFO Merged PRs:
2024-11-25 00:47:42,871 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-11-25 00:47:42,871 [ scc.merge] INFO
2024-11-25 00:47:42,871 [ scc.merge] INFO Conflicting PRs (not included):
2024-11-25 00:47:42,871 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-11-25 00:47:42,871 [ scc.merge] INFO
2024-11-25 00:47:42,871 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-11-25 00:47:42,871 [ scc.git] DEBUG Calling 'git remote'
2024-11-25 00:47:42,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2024-11-25 00:47:42,878 [ scc.git] DEBUG Calling 'git remote'
2024-11-25 00:47:42,884 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:42,884 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2024-11-25 00:47:42,884 [ scc.git] DEBUG Calling 'git remote'
2024-11-25 00:47:42,890 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:42,890 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2024-11-25 00:47:42,890 [ scc.git] DEBUG Calling 'git remote'
2024-11-25 00:47:42,895 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:42,895 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2024-11-25 00:47:42,895 [ scc.git] DEBUG Calling 'git remote'
2024-11-25 00:47:42,900 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:42,900 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2024-11-25 00:47:42,900 [ scc.git] DEBUG Calling 'git remote'
2024-11-25 00:47:42,905 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:42,906 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2024-11-25 00:47:42,906 [ scc.git] DEBUG Calling 'git remote'
2024-11-25 00:47:42,911 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:42,912 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-11-25 00:47:42,912 [ scc.git] DEBUG Calling 'git remote'
2024-11-25 00:47:42,917 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:42,918 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-11-25 00:47:42,918 [ scc.git] DEBUG Calling 'git remote'
2024-11-25 00:47:42,923 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:42,923 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-11-25 00:47:42,923 [ scc.git] DEBUG Calling 'git remote'
2024-11-25 00:47:42,928 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:42,928 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-11-25 00:47:42,928 [ scc.git] DEBUG Calling 'git remote'
2024-11-25 00:47:42,941 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:42,942 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-11-25 00:47:42,942 [ scc.git] DEBUG Calling 'git remote'
2024-11-25 00:47:42,953 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:42,953 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-11-25 00:47:42,954 [ scc.git] DEBUG Calling 'git remote'
2024-11-25 00:47:42,959 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:42,960 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-11-25 00:47:42,960 [ scc.git] DEBUG Calling 'git remote'
2024-11-25 00:47:42,965 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:42,965 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-11-25 00:47:42,965 [ scc.git] DEBUG Calling 'git remote'
2024-11-25 00:47:42,971 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:42,971 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-11-25 00:47:42,972 [ scc.git] DEBUG Calling 'git remote'
2024-11-25 00:47:42,977 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:42,977 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-11-25 00:47:42,977 [ scc.git] DEBUG Calling 'git remote'
2024-11-25 00:47:42,983 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:42,983 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-11-25 00:47:42,983 [ scc.git] DEBUG Calling 'git remote'
2024-11-25 00:47:42,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:42,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-11-25 00:47:42,989 [ scc.git] DEBUG Calling 'git remote'
2024-11-25 00:47:42,994 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:42,994 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-11-25 00:47:42,995 [ scc.git] DEBUG Calling 'git remote'
2024-11-25 00:47:43,000 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:43,000 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-11-25 00:47:43,000 [ scc.git] DEBUG Calling 'git remote'
2024-11-25 00:47:43,005 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:43,005 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-11-25 00:47:43,005 [ scc.git] DEBUG Calling 'git remote'
2024-11-25 00:47:43,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-11-25 00:47:43,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-11-25 00:47:43,010 [ scc.git] DEBUG Calling 'git remote'
2024-11-25 00:47:43,015 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: The wheel package is not available.
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WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.9.2 to 5.10.1-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD 6fef9de] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
HEAD detached from 027b3e6
nothing to commit, working tree clean
Entering 'omero-cli-render'
HEAD detached from 369753f
nothing to commit, working tree clean
Entering 'omero-cli-zarr'
HEAD detached from 9b73dd9
Untracked files:
(use "git add <file>..." to include in what will be committed)
.eggs/
nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
HEAD detached from e0b0d1ae
nothing to commit, working tree clean
Entering 'omero-fpbioimage'
HEAD detached from e5b3ca3
nothing to commit, working tree clean
Entering 'omero-gallery'
HEAD detached from acd798d
nothing to commit, working tree clean
Entering 'omero-iviewer'
HEAD detached from 387b490
nothing to commit, working tree clean
Entering 'omero-mapr'
HEAD detached from c45d76c
nothing to commit, working tree clean
Entering 'omero-metadata'
HEAD detached from fc20959
nothing to commit, working tree clean
Entering 'omero-parade'
HEAD detached from 5d441c2
nothing to commit, working tree clean
Entering 'omero-prometheus-tools'
HEAD detached from 18bccb6
nothing to commit, working tree clean
Entering 'omero-rois'
HEAD detached from 5c752d5
nothing to commit, working tree clean
Entering 'omero-signup'
HEAD detached from c8610db
nothing to commit, working tree clean
Entering 'omero-test-infra'
HEAD detached from cda3ec6
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Entering 'omero-upload'
HEAD detached from aca9e9c
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Entering 'omero-virtual-microscope'
HEAD detached from deab817
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Entering 'omero-web-zarr'
HEAD detached from 67bb245
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Entering 'omero-weberror'
HEAD detached from adfa132
nothing to commit, working tree clean
Entering 'omero-webtest'
HEAD detached from 8da48e1
nothing to commit, working tree clean
Entering 'rOMERO-gateway'
HEAD detached from 7b5d64d
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Entering 'scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
[detached HEAD d14d071] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2024-11-25 00:48:29,810 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2024-11-25 00:48:38,912 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2024-11-25 00:48:41,283 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-11-25 00:48:45,890 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-11-25 00:49:24,523 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS
![[Jenkins]](/jenkins/static/f6f303f9/images/svgs/logo.svg){kind=logo}
