Started by upstream project "Trigger" build number 40 originally caused by: Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/e9d96de4efbb3e39a2ce24824e54985c7c2760a6ed46c5415ea0aa1fd1e18d41/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.52.0' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 36 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + tar -zxf - + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.2 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.9.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.34.2-py3-none-any.whl.metadata (4.8 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.13.0-py3-none-any.whl.metadata (3.4 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.16.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-50.0.0-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (4.3 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.1.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.5 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.9-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (41 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.18-py3-none-any.whl.metadata (6.1 kB) Collecting certifi>=2023.5.7 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.7.22-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.9.1-py3-none-any.whl (449 kB) Using cached pyjwt-2.13.0-py3-none-any.whl (31 kB) Using cached cryptography-50.0.0-cp311-abi3-manylinux_2_34_x86_64.whl (4.7 MB) Using cached cffi-2.1.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (217 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.34.2-py3-none-any.whl (73 kB) Using cached charset_normalizer-3.4.9-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (221 kB) Using cached idna-3.18-py3-none-any.whl (65 kB) Using cached certifi-2026.7.22-py3-none-any.whl (136 kB) Using cached typing_extensions-4.16.0-py3-none-any.whl (45 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.0-py3-none-any.whl (48 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.9.1 PyYAML-6.0.3 certifi-2026.7.22 cffi-2.1.0 charset_normalizer-3.4.9 cryptography-50.0.0 future-1.0.0 idna-3.18 pycparser-3.0 pyjwt-2.13.0 pynacl-1.6.2 requests-2.34.2 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.16.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-08-01 12:03:35,937 [ scc.config] DEBUG Found github.token 2026-08-01 12:03:35,938 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-08-01 12:03:36,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:03:36,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:03:37,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-08-01 12:03:37,064 [ scc.gh] DEBUG 4923 remaining from 5000 (Reset at 12:08 2026-08-01 12:03:37,065 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-01 12:03:37,075 [ scc.git] DEBUG Check current status 2026-08-01 12:03:37,075 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-01 12:03:37,099 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-08-01 12:03:37,100 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-01 12:03:37,300 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-08-01 12:03:37,335 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-08-01 12:03:37,386 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-08-01 12:03:37,433 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-08-01 12:03:37,495 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-08-01 12:03:37,540 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-08-01 12:03:37,594 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-08-01 12:03:37,659 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d46) 2026-08-01 12:03:37,699 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-08-01 12:03:37,735 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-08-01 12:03:37,791 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-08-01 12:03:37,830 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-08-01 12:03:37,871 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-08-01 12:03:37,909 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-08-01 12:03:37,969 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-08-01 12:03:38,007 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-08-01 12:03:38,058 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-08-01 12:03:38,107 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-08-01 12:03:38,146 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-08-01 12:03:38,182 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-08-01 12:03:38,218 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-08-01 12:03:38,241 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-08-01 12:03:38,251 [ scc.config] DEBUG Found remote.origin.url 2026-08-01 12:03:38,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-08-01 12:03:39,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-01 12:03:39,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-01 12:03:39,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-01 12:03:40,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-01 12:03:40,431 [ scc.git] DEBUG Resetting... 2026-08-01 12:03:40,431 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-08-01 12:03:40,729 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-08-01 12:03:40,730 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-08-01 12:03:41,956 [ scc.git] DEBUG Check current status 2026-08-01 12:03:41,956 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-01 12:03:41,974 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-08-01 12:03:41,975 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-01 12:03:42,185 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-08-01 12:03:42,224 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-08-01 12:03:42,260 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-08-01 12:03:42,297 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-08-01 12:03:42,343 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-08-01 12:03:42,378 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-08-01 12:03:42,409 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-08-01 12:03:42,460 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d46) 2026-08-01 12:03:42,497 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-08-01 12:03:42,535 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-08-01 12:03:42,572 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-08-01 12:03:42,610 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-08-01 12:03:42,642 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-08-01 12:03:42,676 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-08-01 12:03:42,712 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-08-01 12:03:42,743 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-08-01 12:03:42,777 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-08-01 12:03:42,810 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-08-01 12:03:42,845 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-08-01 12:03:42,882 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-08-01 12:03:42,917 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-08-01 12:03:42,940 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-08-01 12:03:42,941 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-08-01 12:03:42,942 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-08-01 12:03:42,942 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-08-01 12:03:42,942 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-08-01 12:03:42,942 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-08-01 12:03:42,942 [ scc.repo] DEBUG ## PRs found: 2026-08-01 12:03:43,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-08-01 12:03:43,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-08-01 12:03:43,736 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-01 12:03:43,736 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-08-01 12:03:44,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-08-01 12:03:44,365 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-01 12:03:44,365 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-08-01 12:03:44,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-08-01 12:03:44,820 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-01 12:03:44,820 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-08-01 12:03:44,820 [ scc.repo] DEBUG ## Branches found: 2026-08-01 12:03:44,820 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:03:44,821 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:03:44,831 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-01 12:03:44,847 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-01 12:03:44,847 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-01 12:03:44,865 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-01 12:03:44,912 [ scc.git] DEBUG Already up to date. 2026-08-01 12:03:44,912 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-08-01 12:03:45,349 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-01 12:03:45,349 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-08-01 12:03:45,378 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-08-01 12:03:45,779 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-01 12:03:45,779 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-08-01 12:03:45,812 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-08-01 12:03:46,210 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-01 12:03:46,210 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-08-01 12:03:46,244 [ scc.git] DEBUG ## Unique users: [] 2026-08-01 12:03:46,244 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:03:46,244 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:03:46,257 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-08-01 12:03:46,286 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:03:46,299 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-08-01 12:03:47,070 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:03:47,123 [ scc.git] DEBUG scripts | 2 +- 2026-08-01 12:03:47,123 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-01 12:03:47,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:03:47,320 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-08-01 12:03:47,347 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:03:47,356 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-08-01 12:03:48,121 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:03:48,197 [ scc.git] DEBUG omero-figure | 2 +- 2026-08-01 12:03:48,197 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-01 12:03:48,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:03:48,398 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-08-01 12:03:48,433 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:03:48,445 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-08-01 12:03:49,307 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:03:49,376 [ scc.git] DEBUG omero-iviewer | 2 +- 2026-08-01 12:03:49,376 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-01 12:03:49,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:03:49,568 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-01 12:03:50,441 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-08-01 12:03:51,478 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-08-01 12:03:51,779 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-08-01 12:03:51,780 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:03:51,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:03:51,791 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-01 12:03:54,296 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7598711d90> has no local changes 2026-08-01 12:03:54,297 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#26 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/)' 2026-08-01 12:03:55,595 [ scc.git] DEBUG [detached HEAD c624bdf] merge master -Dorg -Snone 2026-08-01 12:03:55,596 [ scc.merge] INFO Repository: ome/omero-plugins 2026-08-01 12:03:55,596 [ scc.merge] INFO Already up to date. 2026-08-01 12:03:55,596 [ scc.merge] INFO 2026-08-01 12:03:55,596 [ scc.merge] INFO Merged PRs: 2026-08-01 12:03:55,596 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-08-01 12:03:55,596 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-08-01 12:03:55,596 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-08-01 12:03:55,596 [ scc.merge] INFO 2026-08-01 12:03:55,597 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-08-01 12:03:55,597 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' Submodule path 'omero-cli-zarr': checked out '9f844b877d8e19e42a69d7ba43f7dc086680fbec' Submodule path 'omero-figure': checked out '188872793f83c8a30a4cda1d0db1412c61401c00' Submodule path 'omero-iviewer': checked out '177e4b5ec04efe2a2d2e083159f678d8bd747db3' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-rois': checked out 'fc9ff96901ce7b92e3ba51327ba7ba64fff76959' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2026-08-01 12:04:13,885 [ scc.config] DEBUG Found github.token 2026-08-01 12:04:13,887 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-08-01 12:04:14,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:04:14,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:04:15,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-08-01 12:04:15,006 [ scc.gh] DEBUG 4920 remaining from 5000 (Reset at 12:08 2026-08-01 12:04:15,007 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-01 12:04:15,018 [ scc.git] DEBUG Check current status 2026-08-01 12:04:15,018 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-01 12:04:15,040 [ scc.git] DEBUG c624bdf merge master -Dorg -Snone 2026-08-01 12:04:15,041 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-01 12:04:15,236 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-08-01 12:04:15,271 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-08-01 12:04:15,305 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2026-08-01 12:04:15,343 [ scc.git] DEBUG +9f844b877d8e19e42a69d7ba43f7dc086680fbec omero-cli-zarr (v0.8.0-1-g9f844b8) 2026-08-01 12:04:15,388 [ scc.git] DEBUG +188872793f83c8a30a4cda1d0db1412c61401c00 omero-figure (v8.0.1.rc2-14-g18887279) 2026-08-01 12:04:15,425 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-08-01 12:04:15,459 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-08-01 12:04:15,514 [ scc.git] DEBUG +177e4b5ec04efe2a2d2e083159f678d8bd747db3 omero-iviewer (v0.18.0-1-g177e4b5e) 2026-08-01 12:04:15,548 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-08-01 12:04:15,582 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2026-08-01 12:04:15,616 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-08-01 12:04:15,653 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-08-01 12:04:15,692 [ scc.git] DEBUG +fc9ff96901ce7b92e3ba51327ba7ba64fff76959 omero-rois (v0.4.1-1-gfc9ff96) 2026-08-01 12:04:15,723 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-08-01 12:04:15,754 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2026-08-01 12:04:15,784 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-08-01 12:04:15,818 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2026-08-01 12:04:15,850 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2026-08-01 12:04:15,887 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-08-01 12:04:15,921 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-08-01 12:04:15,952 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-08-01 12:04:15,973 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 scripts (v5.10.0-1-g5b4d768) 2026-08-01 12:04:15,984 [ scc.config] DEBUG Found remote.origin.url 2026-08-01 12:04:15,984 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-08-01 12:04:15,987 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2026-08-01 12:04:16,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-08-01 12:04:16,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-01 12:04:17,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-01 12:04:17,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-01 12:04:18,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-01 12:04:18,352 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:04:18,538 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-08-01 12:04:18,538 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-01 12:04:18,551 [ scc.git] DEBUG Check current status 2026-08-01 12:04:18,551 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-01 12:04:18,572 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2026-08-01 12:04:18,573 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-01 12:04:18,701 [ scc.config] DEBUG Found remote.origin.url 2026-08-01 12:04:18,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2026-08-01 12:04:19,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-01 12:04:19,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-01 12:04:20,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-01 12:04:20,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-01 12:04:20,869 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:04:20,988 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:04:20,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-08-01 12:04:20,989 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-01 12:04:21,003 [ scc.git] DEBUG Check current status 2026-08-01 12:04:21,003 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-01 12:04:21,026 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2026-08-01 12:04:21,027 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-01 12:04:21,152 [ scc.config] DEBUG Found remote.origin.url 2026-08-01 12:04:21,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2026-08-01 12:04:21,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-01 12:04:22,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-01 12:04:22,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-01 12:04:23,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-01 12:04:23,392 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:04:23,509 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:04:23,510 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-08-01 12:04:23,510 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-01 12:04:23,522 [ scc.git] DEBUG Check current status 2026-08-01 12:04:23,522 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-01 12:04:23,541 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2026-08-01 12:04:23,542 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-01 12:04:23,656 [ scc.config] DEBUG Found remote.origin.url 2026-08-01 12:04:23,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2026-08-01 12:04:24,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-01 12:04:24,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-01 12:04:25,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-01 12:04:26,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-01 12:04:26,009 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:04:26,125 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:04:26,126 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-08-01 12:04:26,126 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-01 12:04:26,145 [ scc.git] DEBUG Check current status 2026-08-01 12:04:26,145 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-01 12:04:26,166 [ scc.git] DEBUG 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-08-01 12:04:26,167 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-01 12:04:26,292 [ scc.config] DEBUG Found remote.origin.url 2026-08-01 12:04:26,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2026-08-01 12:04:27,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-01 12:04:27,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-01 12:04:28,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-01 12:04:28,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-01 12:04:28,530 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:04:28,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:04:28,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-08-01 12:04:28,653 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-01 12:04:28,665 [ scc.git] DEBUG Check current status 2026-08-01 12:04:28,665 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-01 12:04:28,687 [ scc.git] DEBUG 18887279 Merge pull request #693 from ome/dependabot/npm_and_yarn/dompurify-3.4.9 2026-08-01 12:04:28,688 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-01 12:04:28,816 [ scc.config] DEBUG Found remote.origin.url 2026-08-01 12:04:29,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2026-08-01 12:04:29,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-01 12:04:30,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-01 12:04:30,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-01 12:04:31,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-01 12:04:31,138 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:04:31,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:04:31,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-08-01 12:04:31,251 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-01 12:04:31,265 [ scc.git] DEBUG Check current status 2026-08-01 12:04:31,265 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-01 12:04:31,286 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2026-08-01 12:04:31,288 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-01 12:04:31,413 [ scc.config] DEBUG Found remote.origin.url 2026-08-01 12:04:31,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2026-08-01 12:04:32,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-01 12:04:32,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-01 12:04:33,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-01 12:04:33,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-01 12:04:33,785 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:04:33,897 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:04:33,897 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-08-01 12:04:33,897 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-01 12:04:33,910 [ scc.git] DEBUG Check current status 2026-08-01 12:04:33,910 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-01 12:04:33,929 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2026-08-01 12:04:33,930 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-01 12:04:34,050 [ scc.config] DEBUG Found remote.origin.url 2026-08-01 12:04:34,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2026-08-01 12:04:34,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-01 12:04:35,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-01 12:04:35,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-01 12:04:36,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-01 12:04:36,205 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:04:36,328 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:04:36,328 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-08-01 12:04:36,329 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-01 12:04:36,343 [ scc.git] DEBUG Check current status 2026-08-01 12:04:36,343 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-01 12:04:36,371 [ scc.git] DEBUG 177e4b5e add dev 2026-08-01 12:04:36,373 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-01 12:04:36,500 [ scc.config] DEBUG Found remote.origin.url 2026-08-01 12:04:36,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2026-08-01 12:04:37,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-01 12:04:37,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-01 12:04:38,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-01 12:04:38,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-01 12:04:38,790 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:04:38,909 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:04:38,909 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-08-01 12:04:38,909 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-01 12:04:38,925 [ scc.git] DEBUG Check current status 2026-08-01 12:04:38,925 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-01 12:04:38,944 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2026-08-01 12:04:38,945 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-01 12:04:39,069 [ scc.config] DEBUG Found remote.origin.url 2026-08-01 12:04:39,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2026-08-01 12:04:40,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-01 12:04:40,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-01 12:04:40,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-01 12:04:41,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-01 12:04:41,388 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:04:41,503 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:04:41,504 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-08-01 12:04:41,504 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-01 12:04:41,518 [ scc.git] DEBUG Check current status 2026-08-01 12:04:41,518 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-01 12:04:41,540 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-08-01 12:04:41,541 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-01 12:04:41,671 [ scc.config] DEBUG Found remote.origin.url 2026-08-01 12:04:42,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2026-08-01 12:04:42,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-01 12:04:43,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-01 12:04:43,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-01 12:04:44,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-01 12:04:44,044 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:04:44,164 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:04:44,164 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-08-01 12:04:44,164 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-01 12:04:44,179 [ scc.git] DEBUG Check current status 2026-08-01 12:04:44,179 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-01 12:04:44,203 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2026-08-01 12:04:44,204 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-01 12:04:44,332 [ scc.config] DEBUG Found remote.origin.url 2026-08-01 12:04:44,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2026-08-01 12:04:45,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-01 12:04:45,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-01 12:04:46,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-01 12:04:46,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-01 12:04:46,560 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:04:46,689 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:04:46,690 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-08-01 12:04:46,690 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-01 12:04:46,707 [ scc.git] DEBUG Check current status 2026-08-01 12:04:46,707 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-01 12:04:46,728 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2026-08-01 12:04:46,729 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-01 12:04:46,843 [ scc.config] DEBUG Found remote.origin.url 2026-08-01 12:04:47,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2026-08-01 12:04:47,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-01 12:04:48,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-01 12:04:48,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-01 12:04:49,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-01 12:04:49,220 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:04:49,329 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:04:49,329 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-08-01 12:04:49,330 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-01 12:04:49,342 [ scc.git] DEBUG Check current status 2026-08-01 12:04:49,342 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-01 12:04:49,361 [ scc.git] DEBUG fc9ff96 Bump version: 0.4.1 → 0.4.2.dev0 2026-08-01 12:04:49,362 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-01 12:04:49,485 [ scc.config] DEBUG Found remote.origin.url 2026-08-01 12:04:49,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2026-08-01 12:04:50,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-01 12:04:50,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-01 12:04:51,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-01 12:04:51,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-01 12:04:51,638 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:04:51,764 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:04:51,765 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-08-01 12:04:51,765 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-01 12:04:51,778 [ scc.git] DEBUG Check current status 2026-08-01 12:04:51,778 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-01 12:04:51,799 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2026-08-01 12:04:51,800 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-01 12:04:51,931 [ scc.config] DEBUG Found remote.origin.url 2026-08-01 12:04:52,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2026-08-01 12:04:52,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-01 12:04:53,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-01 12:04:53,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-01 12:04:54,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-01 12:04:54,145 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:04:54,266 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:04:54,267 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-08-01 12:04:54,268 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-01 12:04:54,282 [ scc.git] DEBUG Check current status 2026-08-01 12:04:54,283 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-01 12:04:54,305 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2026-08-01 12:04:54,306 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-01 12:04:54,449 [ scc.config] DEBUG Found remote.origin.url 2026-08-01 12:04:54,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-08-01 12:04:54,654 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-08-01 12:04:54,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2026-08-01 12:04:55,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-01 12:04:56,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-01 12:04:56,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-01 12:04:57,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-01 12:04:57,105 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:04:57,237 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:04:57,238 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-08-01 12:04:57,238 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-01 12:04:57,255 [ scc.git] DEBUG Check current status 2026-08-01 12:04:57,255 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-01 12:04:57,292 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2026-08-01 12:04:57,293 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-01 12:04:57,424 [ scc.config] DEBUG Found remote.origin.url 2026-08-01 12:04:57,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2026-08-01 12:04:58,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-01 12:04:58,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-01 12:04:59,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-01 12:04:59,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-01 12:04:59,917 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:05:00,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:05:00,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-08-01 12:05:00,044 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-01 12:05:00,059 [ scc.git] DEBUG Check current status 2026-08-01 12:05:00,059 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-01 12:05:00,081 [ scc.git] DEBUG 160d894 Fix display of code 2026-08-01 12:05:00,082 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-01 12:05:00,218 [ scc.config] DEBUG Found remote.origin.url 2026-08-01 12:05:00,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2026-08-01 12:05:01,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-01 12:05:01,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-01 12:05:02,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-01 12:05:02,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-01 12:05:02,539 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:05:02,656 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:05:02,656 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-08-01 12:05:02,657 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-01 12:05:02,672 [ scc.git] DEBUG Check current status 2026-08-01 12:05:02,672 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-01 12:05:02,696 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-08-01 12:05:02,698 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-01 12:05:02,836 [ scc.config] DEBUG Found remote.origin.url 2026-08-01 12:05:02,837 [ scc.git] DEBUG Repository configuration: base-branch: main 2026-08-01 12:05:03,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2026-08-01 12:05:03,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-01 12:05:04,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-01 12:05:04,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-01 12:05:04,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-01 12:05:04,986 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:05:05,121 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:05:05,121 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-08-01 12:05:05,122 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-01 12:05:05,140 [ scc.git] DEBUG Check current status 2026-08-01 12:05:05,140 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-01 12:05:05,163 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2026-08-01 12:05:05,164 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-01 12:05:05,312 [ scc.config] DEBUG Found remote.origin.url 2026-08-01 12:05:05,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-08-01 12:05:05,512 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-08-01 12:05:05,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2026-08-01 12:05:06,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-01 12:05:06,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-01 12:05:07,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-01 12:05:07,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-01 12:05:07,835 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:05:07,962 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:05:07,962 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-08-01 12:05:07,962 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-01 12:05:07,979 [ scc.git] DEBUG Check current status 2026-08-01 12:05:07,979 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-01 12:05:08,005 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2026-08-01 12:05:08,006 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-01 12:05:08,159 [ scc.config] DEBUG Found remote.origin.url 2026-08-01 12:05:08,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-08-01 12:05:08,357 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-08-01 12:05:08,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2026-08-01 12:05:09,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-01 12:05:09,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-01 12:05:10,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-01 12:05:10,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-01 12:05:10,653 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:05:10,778 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:05:10,779 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-08-01 12:05:10,779 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-01 12:05:10,793 [ scc.git] DEBUG Check current status 2026-08-01 12:05:10,794 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-01 12:05:10,815 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2026-08-01 12:05:10,817 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-01 12:05:10,951 [ scc.config] DEBUG Found remote.origin.url 2026-08-01 12:05:11,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2026-08-01 12:05:11,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-01 12:05:12,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-01 12:05:12,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-01 12:05:13,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-01 12:05:13,302 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:05:13,417 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:05:13,418 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-08-01 12:05:13,418 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-01 12:05:13,433 [ scc.git] DEBUG Check current status 2026-08-01 12:05:13,433 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-01 12:05:13,454 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0 2026-08-01 12:05:13,455 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-01 12:05:13,587 [ scc.config] DEBUG Found remote.origin.url 2026-08-01 12:05:13,588 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-08-01 12:05:13,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-08-01 12:05:13,935 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-08-01 12:05:14,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2026-08-01 12:05:14,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-01 12:05:15,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-01 12:05:15,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-01 12:05:16,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-01 12:05:16,283 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:05:16,412 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:05:16,412 [ scc.git] DEBUG Resetting... 2026-08-01 12:05:16,412 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-08-01 12:05:16,827 [ scc.git] DEBUG HEAD is now at c624bdf merge master -Dorg -Snone 2026-08-01 12:05:16,829 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-08-01 12:05:17,322 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2026-08-01 12:05:17,772 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2026-08-01 12:05:19,054 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-08-01 12:05:20,068 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-08-01 12:05:20,376 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2026-08-01 12:05:20,862 [ scc.git] DEBUG Submodule path 'omero-rois': checked out 'bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9' 2026-08-01 12:05:21,186 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2026-08-01 12:05:21,497 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2026-08-01 12:05:21,725 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2026-08-01 12:05:22,253 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-08-01 12:05:22,275 [ scc.git] DEBUG Check current status 2026-08-01 12:05:22,275 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-01 12:05:22,300 [ scc.git] DEBUG c624bdf merge master -Dorg -Snone 2026-08-01 12:05:22,300 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-01 12:05:22,499 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-08-01 12:05:22,535 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-08-01 12:05:22,567 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-08-01 12:05:22,597 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-08-01 12:05:22,644 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2026-08-01 12:05:22,688 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-08-01 12:05:22,731 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-08-01 12:05:22,792 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798cee) 2026-08-01 12:05:22,837 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-08-01 12:05:22,873 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-08-01 12:05:22,907 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-08-01 12:05:22,942 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-08-01 12:05:22,978 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-08-01 12:05:23,011 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-08-01 12:05:23,051 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-08-01 12:05:23,086 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-08-01 12:05:23,123 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-08-01 12:05:23,159 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-08-01 12:05:23,195 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-08-01 12:05:23,231 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-08-01 12:05:23,264 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-08-01 12:05:23,287 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2026-08-01 12:05:23,288 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-08-01 12:05:23,288 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-08-01 12:05:23,288 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-08-01 12:05:23,288 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-08-01 12:05:23,288 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-08-01 12:05:23,288 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-08-01 12:05:23,288 [ scc.repo] DEBUG ## PRs found: 2026-08-01 12:05:23,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-08-01 12:05:24,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-08-01 12:05:24,076 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-01 12:05:24,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-08-01 12:05:25,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:05:25,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-08-01 12:05:26,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:05:26,372 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-08-01 12:05:26,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-08-01 12:05:26,872 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-01 12:05:27,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-08-01 12:05:28,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:05:28,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-08-01 12:05:29,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:05:29,031 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-08-01 12:05:29,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-08-01 12:05:29,523 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-01 12:05:30,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-08-01 12:05:30,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:05:31,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-08-01 12:05:31,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:05:31,753 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-08-01 12:05:31,753 [ scc.repo] DEBUG ## Branches found: 2026-08-01 12:05:31,753 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:05:31,753 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:05:31,764 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-01 12:05:31,780 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-01 12:05:31,780 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-01 12:05:31,804 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-01 12:05:31,858 [ scc.git] DEBUG Already up to date. 2026-08-01 12:05:31,858 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-08-01 12:05:32,301 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-01 12:05:32,301 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-08-01 12:05:32,328 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-08-01 12:05:32,726 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-01 12:05:32,726 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-08-01 12:05:32,752 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-08-01 12:05:33,139 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-01 12:05:33,139 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-08-01 12:05:33,192 [ scc.git] DEBUG ## Unique users: [] 2026-08-01 12:05:33,193 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:05:33,193 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:05:33,203 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-08-01 12:05:33,228 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:05:33,238 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-08-01 12:05:33,290 [ scc.git] DEBUG Already up to date. 2026-08-01 12:05:33,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:05:33,508 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-08-01 12:05:33,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:05:33,546 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-08-01 12:05:33,605 [ scc.git] DEBUG Already up to date. 2026-08-01 12:05:33,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:05:33,948 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-08-01 12:05:33,973 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:05:33,985 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-08-01 12:05:34,036 [ scc.git] DEBUG Already up to date. 2026-08-01 12:05:34,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:05:34,416 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-01 12:05:35,291 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:05:35,292 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:05:35,302 [ scc.repo] DEBUG ## PRs found: 2026-08-01 12:05:35,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2026-08-01 12:05:35,533 [ scc.repo] DEBUG ## Branches found: 2026-08-01 12:05:35,533 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-08-01 12:05:35,533 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:05:35,533 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:05:35,549 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-01 12:05:35,568 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-01 12:05:35,568 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-01 12:05:35,593 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-01 12:05:35,655 [ scc.git] DEBUG Already up to date. 2026-08-01 12:05:35,655 [ scc.git] DEBUG ## Unique users: [] 2026-08-01 12:05:35,655 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:05:35,655 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:05:35,674 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-01 12:05:35,803 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:05:35,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:05:35,818 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:05:35,941 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-01 12:05:36,003 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f15c0287fd0> has no local changes 2026-08-01 12:05:36,003 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#26 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/)' 2026-08-01 12:05:36,156 [ scc.git] DEBUG [detached HEAD e07922a] merge master -Dorg -Ssuccess-only 2026-08-01 12:05:36,158 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:05:36,158 [ scc.repo] DEBUG ## PRs found: 2026-08-01 12:05:36,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2026-08-01 12:05:36,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2026-08-01 12:05:36,989 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-01 12:05:37,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-08-01 12:05:38,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:05:38,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-01 12:05:39,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-08-01 12:05:39,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:05:39,578 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-01 12:05:40,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2026-08-01 12:05:40,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2026-08-01 12:05:40,559 [ scc.repo] DEBUG ## Branches found: 2026-08-01 12:05:40,559 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-08-01 12:05:40,560 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:05:40,560 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:05:40,576 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-01 12:05:40,594 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-01 12:05:40,594 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-01 12:05:40,618 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-01 12:05:40,683 [ scc.git] DEBUG Already up to date. 2026-08-01 12:05:40,683 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2026-08-01 12:05:41,079 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2026-08-01 12:05:41,079 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2026-08-01 12:05:41,106 [ scc.git] DEBUG ## Unique users: [] 2026-08-01 12:05:41,106 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:05:41,106 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:05:41,123 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-08-01 12:05:41,151 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:05:41,165 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-08-01 12:05:41,357 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:05:41,427 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-01 12:05:41,427 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-01 12:05:41,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:05:41,620 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-01 12:05:41,742 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:05:41,742 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:05:41,756 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:05:41,859 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-01 12:05:41,911 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f15c2b26410> has no local changes 2026-08-01 12:05:41,911 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#26 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/)' 2026-08-01 12:05:42,037 [ scc.git] DEBUG [detached HEAD 41e92e9] merge master -Dorg -Ssuccess-only 2026-08-01 12:05:42,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:05:42,039 [ scc.repo] DEBUG ## PRs found: 2026-08-01 12:05:42,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2026-08-01 12:05:42,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2026-08-01 12:05:43,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2026-08-01 12:05:43,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-08-01 12:05:44,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:05:45,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-01 12:05:45,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-08-01 12:05:45,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:05:45,971 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2026-08-01 12:05:46,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2026-08-01 12:05:46,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2026-08-01 12:05:46,946 [ scc.repo] DEBUG ## Branches found: 2026-08-01 12:05:46,946 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-08-01 12:05:46,946 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:05:46,946 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:05:46,966 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-01 12:05:46,984 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-01 12:05:46,985 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-01 12:05:47,012 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-01 12:05:47,196 [ scc.git] DEBUG Updating ce6e13c..68b7303 2026-08-01 12:05:47,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2026-08-01 12:05:48,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2026-08-01 12:05:49,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2026-08-01 12:05:50,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2026-08-01 12:05:50,428 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2026-08-01 12:05:51,143 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2026-08-01 12:05:51,143 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2026-08-01 12:05:51,171 [ scc.git] DEBUG ## Unique users: [] 2026-08-01 12:05:51,171 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:05:51,171 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:05:51,187 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-08-01 12:05:51,249 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:05:51,264 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-08-01 12:05:51,438 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2026-08-01 12:05:51,509 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:05:51,572 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2026-08-01 12:05:51,572 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2026-08-01 12:05:51,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:05:51,769 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-01 12:05:51,897 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:05:51,897 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:05:51,912 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:05:52,029 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-01 12:05:52,086 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f15c05145d0> has no local changes 2026-08-01 12:05:52,086 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#26 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/)' 2026-08-01 12:05:52,222 [ scc.git] DEBUG [detached HEAD 202ac69] merge master -Dorg -Ssuccess-only 2026-08-01 12:05:52,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:05:52,224 [ scc.repo] DEBUG ## PRs found: 2026-08-01 12:05:52,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2026-08-01 12:05:53,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/196 HTTP/1.1" 200 None 2026-08-01 12:05:53,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f?page=1 HTTP/1.1" 200 None 2026-08-01 12:05:54,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:05:54,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-01 12:05:55,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f?page=1 HTTP/1.1" 200 None 2026-08-01 12:05:55,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/eeaeaa9e3789fce6809def20cd9a43f37f61668f?per_page=1 HTTP/1.1" 200 None 2026-08-01 12:05:56,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f?page=1 HTTP/1.1" 200 None 2026-08-01 12:05:56,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f/status HTTP/1.1" 200 None 2026-08-01 12:05:56,799 [ scc.repo] DEBUG - PR 196 will-moore 'Storage options only if needed' 2026-08-01 12:05:57,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/194 HTTP/1.1" 200 None 2026-08-01 12:05:57,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b?page=1 HTTP/1.1" 200 None 2026-08-01 12:05:58,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:05:58,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-01 12:05:59,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/193 HTTP/1.1" 200 None 2026-08-01 12:05:59,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-08-01 12:06:00,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:06:01,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-01 12:06:01,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-08-01 12:06:01,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?per_page=1 HTTP/1.1" 200 None 2026-08-01 12:06:02,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-08-01 12:06:03,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/status HTTP/1.1" 200 None 2026-08-01 12:06:03,052 [ scc.repo] DEBUG - PR 193 dominikl 'Only parse import uris if stated' 2026-08-01 12:06:03,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2026-08-01 12:06:04,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2026-08-01 12:06:04,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-08-01 12:06:05,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:06:05,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-01 12:06:06,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-08-01 12:06:06,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None 2026-08-01 12:06:07,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-08-01 12:06:07,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None 2026-08-01 12:06:07,691 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-08-01 12:06:08,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2026-08-01 12:06:08,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2026-08-01 12:06:09,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2026-08-01 12:06:09,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2026-08-01 12:06:10,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-08-01 12:06:10,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:06:11,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-01 12:06:12,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-08-01 12:06:12,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f99a6a6869bf6259376adaea157f24955c9aa3ae?per_page=1 HTTP/1.1" 200 None 2026-08-01 12:06:13,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-08-01 12:06:13,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/status HTTP/1.1" 200 None 2026-08-01 12:06:13,785 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-08-01 12:06:14,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2026-08-01 12:06:14,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2026-08-01 12:06:15,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-08-01 12:06:15,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:06:16,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-01 12:06:16,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-08-01 12:06:17,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2026-08-01 12:06:17,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-08-01 12:06:18,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2026-08-01 12:06:18,529 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2026-08-01 12:06:19,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2026-08-01 12:06:19,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2026-08-01 12:06:20,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2026-08-01 12:06:20,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2026-08-01 12:06:21,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2026-08-01 12:06:21,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2026-08-01 12:06:21,727 [ scc.repo] DEBUG ## Branches found: 2026-08-01 12:06:21,727 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-08-01 12:06:21,728 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:06:21,728 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:06:21,749 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-01 12:06:21,769 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-01 12:06:21,769 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-01 12:06:21,862 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-01 12:06:22,248 [ scc.git] DEBUG Updating 11d3587..9f844b8 2026-08-01 12:06:22,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/172 HTTP/1.1" 200 None 2026-08-01 12:06:23,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/192 HTTP/1.1" 200 None 2026-08-01 12:06:24,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/186 HTTP/1.1" 200 None 2026-08-01 12:06:25,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/187 HTTP/1.1" 200 None 2026-08-01 12:06:26,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2026-08-01 12:06:27,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2026-08-01 12:06:28,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2026-08-01 12:06:29,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2026-08-01 12:06:29,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2026-08-01 12:06:30,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2026-08-01 12:06:31,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2026-08-01 12:06:32,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2026-08-01 12:06:32,609 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2026-08-01 12:06:33,520 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-08-01 12:06:33,520 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2026-08-01 12:06:33,549 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2026-08-01 12:06:34,104 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-08-01 12:06:34,104 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2026-08-01 12:06:34,129 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2026-08-01 12:06:34,600 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-08-01 12:06:34,600 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2026-08-01 12:06:34,633 [ scc.git] DEBUG Calling 'git fetch origin pull/193/head' 2026-08-01 12:06:35,046 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-08-01 12:06:35,047 [ scc.git] DEBUG * branch refs/pull/193/head -> FETCH_HEAD 2026-08-01 12:06:35,069 [ scc.git] DEBUG Calling 'git fetch origin pull/196/head' 2026-08-01 12:06:35,623 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-08-01 12:06:35,623 [ scc.git] DEBUG * branch refs/pull/196/head -> FETCH_HEAD 2026-08-01 12:06:35,649 [ scc.git] DEBUG ## Unique users: [] 2026-08-01 12:06:35,649 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:06:35,649 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:06:35,662 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-08-01 12:06:35,722 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:06:35,735 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-08-01 12:06:36,096 [ scc.git] DEBUG Auto-merging README.rst 2026-08-01 12:06:36,096 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-08-01 12:06:36,096 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py 2026-08-01 12:06:36,096 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-08-01 12:06:36,096 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-08-01 12:06:36,096 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2026-08-01 12:06:36,096 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2026-08-01 12:06:36,096 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2026-08-01 12:06:36,096 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py 2026-08-01 12:06:36,096 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-08-01 12:06:36,096 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-08-01 12:06:36,118 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-01 12:06:36,119 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-01 12:06:36,151 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-01 12:06:36,347 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-08-01 12:06:36,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:06:36,542 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-08-01 12:06:36,579 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-01 12:06:36,603 [ scc.git] INFO - PR 174 will-moore 'Skip wells' Conflicting PR. Removed from build [OMERO-plugins-push#26](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/consoleText) for more details. Possible conflicts: - Upstream changes - test/integration/clitest/test_export.py - src/omero_zarr/masks.py - src/omero_zarr/raw_pixels.py - src/omero_zarr/cli.py - src/omero_zarr/util.py --conflicts 2026-08-01 12:06:36,613 [ scc.config] DEBUG Found github.token 2026-08-01 12:06:36,613 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts. 2026-08-01 12:06:36,613 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-08-01 12:06:36,654 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:06:36,667 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-08-01 12:06:36,895 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-08-01 12:06:36,895 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-08-01 12:06:36,895 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-08-01 12:06:36,895 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-08-01 12:06:36,917 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-01 12:06:36,918 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-01 12:06:36,946 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-01 12:06:37,086 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-08-01 12:06:37,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:06:37,267 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-08-01 12:06:37,301 [ scc.git] DEBUG Calling 'git diff --name-only 9530c10ba9823fcba6b39139987bf4bcd4a60179..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-01 12:06:37,323 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#26](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/consoleText) for more details. Possible conflicts: - PR #174 will-moore 'Skip wells' - test/integration/clitest/test_export.py - src/omero_zarr/masks.py - Upstream changes - test/integration/clitest/test_export.py - src/omero_zarr/masks.py --conflicts 2026-08-01 12:06:37,337 [ scc.config] DEBUG Found github.token 2026-08-01 12:06:37,337 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2026-08-01 12:06:37,337 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-08-01 12:06:37,374 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:06:37,387 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-08-01 12:06:37,637 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-08-01 12:06:37,637 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-08-01 12:06:37,637 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2026-08-01 12:06:37,637 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_import.py 2026-08-01 12:06:37,637 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_import.py 2026-08-01 12:06:37,660 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-01 12:06:37,661 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-01 12:06:37,690 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-01 12:06:37,842 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-08-01 12:06:38,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:06:38,016 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-08-01 12:06:38,054 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-01 12:06:38,077 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#26](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/consoleText) for more details. Possible conflicts: - Upstream changes - test/integration/clitest/test_import.py - src/omero_zarr/zarr_import.py --conflicts 2026-08-01 12:06:38,092 [ scc.config] DEBUG Found github.token 2026-08-01 12:06:38,092 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2026-08-01 12:06:38,092 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-08-01 12:06:38,126 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:06:38,141 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 193 (Only parse import uris if stated) bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-08-01 12:06:38,376 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:06:38,440 [ scc.git] DEBUG src/omero_zarr/cli.py | 8 ++++++++ 2026-08-01 12:06:38,440 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 40 +++++++++++++++++++++------------------- 2026-08-01 12:06:38,440 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 19 deletions(-) 2026-08-01 12:06:38,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:06:38,775 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eeaeaa9e3789fce6809def20cd9a43f37f61668f' 2026-08-01 12:06:38,828 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:06:38,845 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 196 (Storage options only if needed) eeaeaa9e3789fce6809def20cd9a43f37f61668f' 2026-08-01 12:06:39,067 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-08-01 12:06:39,132 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:06:39,225 [ scc.git] DEBUG .pre-commit-config.yaml | 2 +- 2026-08-01 12:06:39,225 [ scc.git] DEBUG src/omero_zarr/masks.py | 10 ++++++++++ 2026-08-01 12:06:39,225 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 6 ++---- 2026-08-01 12:06:39,225 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 3 ++- 2026-08-01 12:06:39,225 [ scc.git] DEBUG test/integration/clitest/test_export.py | 2 +- 2026-08-01 12:06:39,225 [ scc.git] DEBUG 5 files changed, 16 insertions(+), 7 deletions(-) 2026-08-01 12:06:39,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:06:39,414 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-01 12:06:39,546 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:06:39,546 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:06:39,559 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:06:39,666 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-01 12:06:39,723 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f15c0216b10> has no local changes 2026-08-01 12:06:39,723 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' - PR 196 will-moore 'Storage options only if needed' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#26 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/)' 2026-08-01 12:06:39,908 [ scc.git] DEBUG [detached HEAD 6bf590f] merge master -Dorg -Ssuccess-only 2026-08-01 12:06:39,910 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:06:39,910 [ scc.repo] DEBUG ## PRs found: 2026-08-01 12:06:40,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2026-08-01 12:06:40,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/696 HTTP/1.1" 200 None 2026-08-01 12:06:40,737 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-01 12:06:41,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/abde8720db39ce43974f7b5c8d717eb52472b226?page=1 HTTP/1.1" 200 None 2026-08-01 12:06:42,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/abde8720db39ce43974f7b5c8d717eb52472b226/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:06:42,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/abde8720db39ce43974f7b5c8d717eb52472b226/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-01 12:06:43,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/abde8720db39ce43974f7b5c8d717eb52472b226?page=1 HTTP/1.1" 200 None 2026-08-01 12:06:43,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/abde8720db39ce43974f7b5c8d717eb52472b226?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:06:43,865 [ scc.repo] DEBUG - PR 696 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.12' 2026-08-01 12:06:44,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/695 HTTP/1.1" 200 None 2026-08-01 12:06:44,348 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-01 12:06:44,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6a1c677b187fbe3fefabeebba659660e1c08dad8?page=1 HTTP/1.1" 200 None 2026-08-01 12:06:45,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6a1c677b187fbe3fefabeebba659660e1c08dad8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:06:46,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6a1c677b187fbe3fefabeebba659660e1c08dad8/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-01 12:06:46,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6a1c677b187fbe3fefabeebba659660e1c08dad8?page=1 HTTP/1.1" 200 None 2026-08-01 12:06:47,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6a1c677b187fbe3fefabeebba659660e1c08dad8?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:06:47,061 [ scc.repo] DEBUG - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' 2026-08-01 12:06:47,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/692 HTTP/1.1" 200 None 2026-08-01 12:06:48,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2?page=1 HTTP/1.1" 200 None 2026-08-01 12:06:48,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:06:49,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-01 12:06:49,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2?page=1 HTTP/1.1" 200 None 2026-08-01 12:06:50,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/123f30064dc116c09098786206e54f8ec811c2c2?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:06:50,474 [ scc.repo] DEBUG - PR 692 will-moore 'colorbar lut background fix' 2026-08-01 12:06:50,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None 2026-08-01 12:06:51,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652/comments HTTP/1.1" 200 None 2026-08-01 12:06:51,501 [ scc.repo] DEBUG # ... Include label: include 2026-08-01 12:06:52,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234?page=1 HTTP/1.1" 200 None 2026-08-01 12:06:52,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:06:53,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-01 12:06:54,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234?page=1 HTTP/1.1" 200 None 2026-08-01 12:06:54,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:06:54,653 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-08-01 12:06:54,653 [ scc.repo] DEBUG ## Branches found: 2026-08-01 12:06:54,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-08-01 12:06:54,653 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:06:54,654 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:06:54,673 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-01 12:06:54,692 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-01 12:06:54,692 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-01 12:06:54,800 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-01 12:06:56,114 [ scc.git] DEBUG Updating 9cc36cde..18887279 2026-08-01 12:06:56,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/693 HTTP/1.1" 200 None 2026-08-01 12:06:57,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/691 HTTP/1.1" 200 None 2026-08-01 12:06:58,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/686 HTTP/1.1" 200 None 2026-08-01 12:06:59,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/690 HTTP/1.1" 200 None 2026-08-01 12:06:59,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/681 HTTP/1.1" 200 None 2026-08-01 12:07:00,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/688 HTTP/1.1" 200 None 2026-08-01 12:07:01,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/685 HTTP/1.1" 200 None 2026-08-01 12:07:02,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/683 HTTP/1.1" 200 None 2026-08-01 12:07:03,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/680 HTTP/1.1" 200 None 2026-08-01 12:07:03,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/684 HTTP/1.1" 200 None 2026-08-01 12:07:04,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/682 HTTP/1.1" 200 None 2026-08-01 12:07:05,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/679 HTTP/1.1" 200 None 2026-08-01 12:07:06,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/677 HTTP/1.1" 200 None 2026-08-01 12:07:07,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/666 HTTP/1.1" 200 None 2026-08-01 12:07:08,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/676 HTTP/1.1" 200 None 2026-08-01 12:07:08,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/669 HTTP/1.1" 200 None 2026-08-01 12:07:09,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/662 HTTP/1.1" 200 None 2026-08-01 12:07:10,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/663 HTTP/1.1" 200 None 2026-08-01 12:07:11,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/674 HTTP/1.1" 200 None 2026-08-01 12:07:12,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/675 HTTP/1.1" 200 None 2026-08-01 12:07:13,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/671 HTTP/1.1" 200 None 2026-08-01 12:07:14,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/672 HTTP/1.1" 200 None 2026-08-01 12:07:15,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/667 HTTP/1.1" 200 None 2026-08-01 12:07:15,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/665 HTTP/1.1" 200 None 2026-08-01 12:07:16,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/656 HTTP/1.1" 200 None 2026-08-01 12:07:17,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/670 HTTP/1.1" 200 None 2026-08-01 12:07:18,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/664 HTTP/1.1" 200 None 2026-08-01 12:07:19,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/654 HTTP/1.1" 200 None 2026-08-01 12:07:20,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/648 HTTP/1.1" 200 None 2026-08-01 12:07:21,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/661 HTTP/1.1" 200 None 2026-08-01 12:07:22,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None 2026-08-01 12:07:22,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None 2026-08-01 12:07:23,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None 2026-08-01 12:07:24,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None 2026-08-01 12:07:25,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2026-08-01 12:07:26,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2026-08-01 12:07:27,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2026-08-01 12:07:28,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2026-08-01 12:07:29,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2026-08-01 12:07:30,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2026-08-01 12:07:30,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2026-08-01 12:07:31,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2026-08-01 12:07:32,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2026-08-01 12:07:33,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2026-08-01 12:07:34,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2026-08-01 12:07:34,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2026-08-01 12:07:35,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2026-08-01 12:07:36,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2026-08-01 12:07:37,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2026-08-01 12:07:38,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2026-08-01 12:07:38,672 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head' 2026-08-01 12:07:39,293 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-08-01 12:07:39,293 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD 2026-08-01 12:07:39,323 [ scc.git] DEBUG Calling 'git fetch origin pull/692/head' 2026-08-01 12:07:39,796 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-08-01 12:07:39,796 [ scc.git] DEBUG * branch refs/pull/692/head -> FETCH_HEAD 2026-08-01 12:07:39,822 [ scc.git] DEBUG Calling 'git fetch origin pull/695/head' 2026-08-01 12:07:40,249 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-08-01 12:07:40,249 [ scc.git] DEBUG * branch refs/pull/695/head -> FETCH_HEAD 2026-08-01 12:07:40,278 [ scc.git] DEBUG Calling 'git fetch origin pull/696/head' 2026-08-01 12:07:40,710 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-08-01 12:07:40,710 [ scc.git] DEBUG * branch refs/pull/696/head -> FETCH_HEAD 2026-08-01 12:07:40,736 [ scc.git] DEBUG ## Unique users: [] 2026-08-01 12:07:40,736 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:07:40,736 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:07:40,751 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-08-01 12:07:40,814 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:07:40,829 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-08-01 12:07:41,288 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-08-01 12:07:41,288 [ scc.git] DEBUG Auto-merging src/index.html 2026-08-01 12:07:41,288 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-08-01 12:07:41,356 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:07:41,429 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++- 2026-08-01 12:07:41,429 [ scc.git] DEBUG src/index.html | 11 ++ 2026-08-01 12:07:41,429 [ scc.git] DEBUG src/js/views/figure_view.js | 1 + 2026-08-01 12:07:41,429 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-) 2026-08-01 12:07:41,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:07:41,626 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...123f30064dc116c09098786206e54f8ec811c2c2' 2026-08-01 12:07:41,678 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:07:41,691 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 692 (colorbar lut background fix) 123f30064dc116c09098786206e54f8ec811c2c2' 2026-08-01 12:07:41,950 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:07:42,029 [ scc.git] DEBUG src/js/views/panel_view.js | 5 +++++ 2026-08-01 12:07:42,029 [ scc.git] DEBUG src/templates/colorbar.template.html | 2 +- 2026-08-01 12:07:42,029 [ scc.git] DEBUG 2 files changed, 6 insertions(+), 1 deletion(-) 2026-08-01 12:07:42,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:07:42,224 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a1c677b187fbe3fefabeebba659660e1c08dad8' 2026-08-01 12:07:42,300 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:07:42,316 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 695 (Bump immutable from 5.1.6 to 5.1.9) 6a1c677b187fbe3fefabeebba659660e1c08dad8' 2026-08-01 12:07:42,657 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:07:42,730 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-08-01 12:07:42,730 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-08-01 12:07:43,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:07:43,058 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...abde8720db39ce43974f7b5c8d717eb52472b226' 2026-08-01 12:07:43,133 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:07:43,149 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 696 (Bump dompurify from 3.4.9 to 3.4.12) abde8720db39ce43974f7b5c8d717eb52472b226' 2026-08-01 12:07:43,418 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-01 12:07:43,491 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:07:43,580 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2026-08-01 12:07:43,580 [ scc.git] DEBUG package.json | 2 +- 2026-08-01 12:07:43,580 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2026-08-01 12:07:43,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:07:43,756 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-01 12:07:43,883 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:07:43,883 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:07:43,898 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:07:44,018 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-01 12:07:44,164 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f15c02507d0> has no local changes 2026-08-01 12:07:44,164 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Updating 9cc36cde..18887279 Previously merged: - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' - PR 691 dependabot[bot] 'Bump esbuild and vite' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 692 will-moore 'colorbar lut background fix' - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' - PR 696 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.12' Generated by OMERO-plugins-push#26 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/)' 2026-08-01 12:07:44,344 [ scc.git] DEBUG [detached HEAD e4f232a3] merge master -Dorg -Ssuccess-only 2026-08-01 12:07:44,345 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:07:44,345 [ scc.repo] DEBUG ## PRs found: 2026-08-01 12:07:44,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2026-08-01 12:07:45,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2026-08-01 12:07:45,155 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-01 12:07:46,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-08-01 12:07:46,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:07:47,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-01 12:07:47,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-08-01 12:07:48,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:07:48,164 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-01 12:07:48,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2026-08-01 12:07:49,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2026-08-01 12:07:49,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-08-01 12:07:50,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:07:50,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-08-01 12:07:51,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:07:51,298 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2026-08-01 12:07:51,298 [ scc.repo] DEBUG ## Branches found: 2026-08-01 12:07:51,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-08-01 12:07:51,299 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:07:51,299 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:07:51,324 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-01 12:07:51,348 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-01 12:07:51,348 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-01 12:07:51,377 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-01 12:07:51,456 [ scc.git] DEBUG Already up to date. 2026-08-01 12:07:51,456 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2026-08-01 12:07:51,910 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-08-01 12:07:51,910 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2026-08-01 12:07:51,935 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2026-08-01 12:07:52,341 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-08-01 12:07:52,341 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2026-08-01 12:07:52,362 [ scc.git] DEBUG ## Unique users: [] 2026-08-01 12:07:52,362 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:07:52,362 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:07:52,381 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-08-01 12:07:52,415 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:07:52,433 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-08-01 12:07:52,590 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2026-08-01 12:07:52,675 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:07:52,739 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2026-08-01 12:07:52,739 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2026-08-01 12:07:52,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:07:52,932 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-08-01 12:07:52,961 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:07:52,977 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-08-01 12:07:53,175 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:07:53,240 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-01 12:07:53,240 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-01 12:07:53,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:07:53,447 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-01 12:07:53,589 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:07:53,589 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:07:53,601 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:07:53,720 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-01 12:07:53,787 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f15c0228750> has no local changes 2026-08-01 12:07:53,787 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#26 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/)' 2026-08-01 12:07:53,958 [ scc.git] DEBUG [detached HEAD 84a49b0] merge master -Dorg -Ssuccess-only 2026-08-01 12:07:53,960 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:07:53,960 [ scc.repo] DEBUG ## PRs found: 2026-08-01 12:07:54,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2026-08-01 12:07:54,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2026-08-01 12:07:55,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2026-08-01 12:07:56,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2026-08-01 12:07:56,072 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-01 12:07:56,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-08-01 12:07:57,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:07:57,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-08-01 12:07:58,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:07:58,239 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-08-01 12:07:58,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2026-08-01 12:07:59,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2026-08-01 12:07:59,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2026-08-01 12:07:59,740 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-01 12:08:00,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-08-01 12:08:00,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:08:01,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-08-01 12:08:01,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:08:01,857 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-08-01 12:08:02,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2026-08-01 12:08:02,351 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-01 12:08:02,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-08-01 12:08:03,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:08:03,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-08-01 12:08:04,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:08:04,381 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-08-01 12:08:04,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2026-08-01 12:08:04,919 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-01 12:08:05,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-08-01 12:08:06,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:08:06,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-08-01 12:08:07,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:08:07,147 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-08-01 12:08:07,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2026-08-01 12:08:08,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2026-08-01 12:08:08,112 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-01 12:08:08,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-08-01 12:08:09,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:08:09,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-08-01 12:08:10,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:08:10,161 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-08-01 12:08:10,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2026-08-01 12:08:10,661 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-01 12:08:11,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-08-01 12:08:11,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:08:12,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-08-01 12:08:12,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:08:12,809 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-08-01 12:08:13,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2026-08-01 12:08:13,270 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-01 12:08:13,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-08-01 12:08:14,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:08:14,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-08-01 12:08:15,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:08:15,308 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-08-01 12:08:15,308 [ scc.repo] DEBUG ## Branches found: 2026-08-01 12:08:15,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-08-01 12:08:15,309 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:08:15,309 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:08:15,331 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-01 12:08:15,354 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-01 12:08:15,354 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-01 12:08:15,380 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-01 12:08:15,447 [ scc.git] DEBUG Already up to date. 2026-08-01 12:08:15,447 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2026-08-01 12:08:15,867 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-01 12:08:15,867 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2026-08-01 12:08:15,896 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2026-08-01 12:08:16,321 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-01 12:08:16,321 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2026-08-01 12:08:16,346 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2026-08-01 12:08:16,742 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-01 12:08:16,742 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2026-08-01 12:08:16,767 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2026-08-01 12:08:17,164 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-01 12:08:17,164 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2026-08-01 12:08:17,191 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2026-08-01 12:08:17,590 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-01 12:08:17,590 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2026-08-01 12:08:17,616 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2026-08-01 12:08:18,006 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-01 12:08:18,006 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2026-08-01 12:08:18,029 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2026-08-01 12:08:18,440 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-01 12:08:18,440 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2026-08-01 12:08:18,463 [ scc.git] DEBUG ## Unique users: [] 2026-08-01 12:08:18,463 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:08:18,463 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:08:18,477 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-08-01 12:08:18,501 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:08:18,515 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-08-01 12:08:18,719 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:08:18,787 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-08-01 12:08:18,787 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-08-01 12:08:18,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:08:18,975 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-08-01 12:08:19,009 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:08:19,026 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-08-01 12:08:19,209 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-01 12:08:19,286 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:08:19,355 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2026-08-01 12:08:19,355 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2026-08-01 12:08:19,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:08:19,547 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-08-01 12:08:19,583 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:08:19,598 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-08-01 12:08:19,810 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-01 12:08:19,810 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-08-01 12:08:19,837 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-01 12:08:19,839 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-01 12:08:19,875 [ scc.git] DEBUG Calling 'git reset --hard e1a5bfbc4791262b62e3575dd11f0e6f873b08d0' 2026-08-01 12:08:20,042 [ scc.git] DEBUG HEAD is now at e1a5bfb merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2026-08-01 12:08:20,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:08:20,240 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-08-01 12:08:20,268 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-08-01 12:08:20,289 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#26](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2026-08-01 12:08:20,303 [ scc.config] DEBUG Found github.token 2026-08-01 12:08:20,303 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2026-08-01 12:08:20,303 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-08-01 12:08:20,332 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:08:20,347 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-08-01 12:08:20,533 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-01 12:08:20,610 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:08:20,688 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2026-08-01 12:08:20,688 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2026-08-01 12:08:20,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:08:20,867 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-08-01 12:08:20,902 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:08:20,918 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-08-01 12:08:21,076 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-01 12:08:21,152 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:08:21,229 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-08-01 12:08:21,229 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-08-01 12:08:21,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:08:21,424 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-08-01 12:08:21,463 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:08:21,479 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-08-01 12:08:21,686 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-01 12:08:21,686 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-08-01 12:08:21,708 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-01 12:08:21,709 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-01 12:08:21,742 [ scc.git] DEBUG Calling 'git reset --hard 984fa424304e2a92b11d284fd65d400a914cdbaf' 2026-08-01 12:08:21,893 [ scc.git] DEBUG HEAD is now at 984fa42 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-08-01 12:08:22,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:08:22,084 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-08-01 12:08:22,111 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-08-01 12:08:22,136 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#26](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2026-08-01 12:08:22,150 [ scc.config] DEBUG Found github.token 2026-08-01 12:08:22,150 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2026-08-01 12:08:22,150 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-08-01 12:08:22,179 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:08:22,192 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-08-01 12:08:22,369 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-01 12:08:22,369 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-08-01 12:08:22,392 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-01 12:08:22,393 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-01 12:08:22,427 [ scc.git] DEBUG Calling 'git reset --hard 984fa424304e2a92b11d284fd65d400a914cdbaf' 2026-08-01 12:08:22,577 [ scc.git] DEBUG HEAD is now at 984fa42 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-08-01 12:08:22,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:08:22,920 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-08-01 12:08:22,947 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-08-01 12:08:22,971 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#26](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2026-08-01 12:08:22,983 [ scc.config] DEBUG Found github.token 2026-08-01 12:08:22,983 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2026-08-01 12:08:22,983 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-01 12:08:23,110 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:08:23,110 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:08:23,124 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:08:23,233 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-01 12:08:23,306 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f15c00b8c50> has no local changes 2026-08-01 12:08:23,306 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#26 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/)' 2026-08-01 12:08:23,463 [ scc.git] DEBUG [detached HEAD 5b9f2fb] merge master -Dorg -Ssuccess-only 2026-08-01 12:08:23,465 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:08:23,465 [ scc.repo] DEBUG ## PRs found: 2026-08-01 12:08:23,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2026-08-01 12:08:24,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/546 HTTP/1.1" 200 None 2026-08-01 12:08:25,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78?page=1 HTTP/1.1" 200 None 2026-08-01 12:08:25,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:08:26,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-01 12:08:26,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78?page=1 HTTP/1.1" 200 None 2026-08-01 12:08:27,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/cf1523e8c6e3d91d8b862eb49a5b679caa796c78?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:08:27,240 [ scc.repo] DEBUG - PR 546 will-moore 'Use POST data for saveImgRdef params' 2026-08-01 12:08:27,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/532 HTTP/1.1" 200 None 2026-08-01 12:08:28,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/532/comments HTTP/1.1" 200 None 2026-08-01 12:08:28,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?page=1 HTTP/1.1" 200 None 2026-08-01 12:08:29,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:08:29,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-01 12:08:30,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?page=1 HTTP/1.1" 200 None 2026-08-01 12:08:30,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:08:30,910 [ scc.repo] DEBUG - PR 532 will-moore 'Zarr layers' 2026-08-01 12:08:31,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2026-08-01 12:08:31,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2026-08-01 12:08:32,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-08-01 12:08:32,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:08:33,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-08-01 12:08:33,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:08:33,871 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2026-08-01 12:08:33,871 [ scc.repo] DEBUG ## Branches found: 2026-08-01 12:08:33,871 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-08-01 12:08:33,872 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:08:33,872 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:08:33,892 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-01 12:08:33,923 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-01 12:08:33,923 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-01 12:08:34,076 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-01 12:08:34,847 [ scc.git] DEBUG Updating 7a798cee..177e4b5e 2026-08-01 12:08:35,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/541 HTTP/1.1" 200 None 2026-08-01 12:08:36,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/556 HTTP/1.1" 200 None 2026-08-01 12:08:37,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/554 HTTP/1.1" 200 None 2026-08-01 12:08:38,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/553 HTTP/1.1" 200 None 2026-08-01 12:08:38,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/552 HTTP/1.1" 200 None 2026-08-01 12:08:39,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/551 HTTP/1.1" 200 None 2026-08-01 12:08:40,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/550 HTTP/1.1" 200 None 2026-08-01 12:08:41,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/549 HTTP/1.1" 200 None 2026-08-01 12:08:42,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/548 HTTP/1.1" 200 None 2026-08-01 12:08:43,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/547 HTTP/1.1" 200 None 2026-08-01 12:08:44,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/540 HTTP/1.1" 200 None 2026-08-01 12:08:44,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/539 HTTP/1.1" 200 None 2026-08-01 12:08:45,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/537 HTTP/1.1" 200 None 2026-08-01 12:08:46,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/535 HTTP/1.1" 200 None 2026-08-01 12:08:47,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/527 HTTP/1.1" 200 None 2026-08-01 12:08:48,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/534 HTTP/1.1" 200 None 2026-08-01 12:08:48,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/533 HTTP/1.1" 200 None 2026-08-01 12:08:49,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/530 HTTP/1.1" 200 None 2026-08-01 12:08:50,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/528 HTTP/1.1" 200 None 2026-08-01 12:08:51,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/529 HTTP/1.1" 200 None 2026-08-01 12:08:52,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/526 HTTP/1.1" 200 None 2026-08-01 12:08:53,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/525 HTTP/1.1" 200 None 2026-08-01 12:08:53,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/524 HTTP/1.1" 200 None 2026-08-01 12:08:54,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/523 HTTP/1.1" 200 None 2026-08-01 12:08:55,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/522 HTTP/1.1" 200 None 2026-08-01 12:08:56,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/521 HTTP/1.1" 200 None 2026-08-01 12:08:57,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/520 HTTP/1.1" 200 None 2026-08-01 12:08:58,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/519 HTTP/1.1" 200 None 2026-08-01 12:08:58,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/518 HTTP/1.1" 200 None 2026-08-01 12:08:59,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/514 HTTP/1.1" 200 None 2026-08-01 12:09:00,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/513 HTTP/1.1" 200 None 2026-08-01 12:09:01,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/512 HTTP/1.1" 200 None 2026-08-01 12:09:02,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/465 HTTP/1.1" 200 None 2026-08-01 12:09:03,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/517 HTTP/1.1" 200 None 2026-08-01 12:09:04,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/516 HTTP/1.1" 200 None 2026-08-01 12:09:05,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2026-08-01 12:09:06,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2026-08-01 12:09:06,145 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2026-08-01 12:09:06,734 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-08-01 12:09:06,734 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2026-08-01 12:09:06,765 [ scc.git] DEBUG Calling 'git fetch origin pull/532/head' 2026-08-01 12:09:07,251 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-08-01 12:09:07,251 [ scc.git] DEBUG * branch refs/pull/532/head -> FETCH_HEAD 2026-08-01 12:09:07,282 [ scc.git] DEBUG Calling 'git fetch origin pull/546/head' 2026-08-01 12:09:07,763 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-08-01 12:09:07,764 [ scc.git] DEBUG * branch refs/pull/546/head -> FETCH_HEAD 2026-08-01 12:09:07,792 [ scc.git] DEBUG ## Unique users: [] 2026-08-01 12:09:07,792 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:09:07,792 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:09:07,810 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2026-08-01 12:09:07,873 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:09:07,888 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2026-08-01 12:09:08,193 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2026-08-01 12:09:08,268 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:09:08,342 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2026-08-01 12:09:08,342 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2026-08-01 12:09:08,343 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2026-08-01 12:09:08,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:09:08,537 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-08-01 12:09:08,594 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:09:08,610 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 532 (Zarr layers) fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-08-01 12:09:09,388 [ scc.git] DEBUG Auto-merging css/app.css 2026-08-01 12:09:09,388 [ scc.git] DEBUG CONFLICT (content): Merge conflict in css/app.css 2026-08-01 12:09:09,388 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-01 12:09:09,388 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-08-01 12:09:09,388 [ scc.git] DEBUG Auto-merging package.json 2026-08-01 12:09:09,388 [ scc.git] DEBUG Auto-merging src/app/context.js 2026-08-01 12:09:09,388 [ scc.git] DEBUG Auto-merging src/model/image_config.js 2026-08-01 12:09:09,388 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2026-08-01 12:09:09,388 [ scc.git] DEBUG Auto-merging src/viewers/viewer/source/Image.js 2026-08-01 12:09:09,388 [ scc.git] DEBUG Auto-merging webpack.dev.config.js 2026-08-01 12:09:09,410 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-01 12:09:09,413 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-01 12:09:09,501 [ scc.git] DEBUG Calling 'git reset --hard cc80f295055fabb922a4c36457b3fde4e8dfa18f' 2026-08-01 12:09:09,873 [ scc.git] DEBUG HEAD is now at cc80f295 merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 2026-08-01 12:09:10,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:09:10,069 [ scc.git] DEBUG Calling 'git merge-base 177e4b5ec04efe2a2d2e083159f678d8bd747db3 fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-08-01 12:09:10,117 [ scc.git] DEBUG Calling 'git diff --name-only 0b7eaf71f7e3f5c7289fab4bf857094bdadce1e4..177e4b5ec04efe2a2d2e083159f678d8bd747db3' 2026-08-01 12:09:10,164 [ scc.git] INFO - PR 532 will-moore 'Zarr layers' Conflicting PR. Removed from build [OMERO-plugins-push#26](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/consoleText) for more details. Possible conflicts: - Upstream changes - package-lock.json - css/app.css --conflicts 2026-08-01 12:09:10,178 [ scc.config] DEBUG Found github.token 2026-08-01 12:09:10,178 [ scc.git] DEBUG Not adding comment to issue #532, already --conflicts. 2026-08-01 12:09:10,178 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf1523e8c6e3d91d8b862eb49a5b679caa796c78' 2026-08-01 12:09:10,237 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:09:10,251 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 546 (Use POST data for saveImgRdef params) cf1523e8c6e3d91d8b862eb49a5b679caa796c78' 2026-08-01 12:09:10,473 [ scc.git] DEBUG Auto-merging src/model/image_config.js 2026-08-01 12:09:10,553 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:09:10,627 [ scc.git] DEBUG src/model/image_config.js | 7 ++++--- 2026-08-01 12:09:10,627 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 3 deletions(-) 2026-08-01 12:09:10,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:09:10,833 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-01 12:09:10,970 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:09:10,970 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:09:10,984 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:09:11,093 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-01 12:09:11,188 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f15c022c310> has no local changes 2026-08-01 12:09:11,188 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7a798cee..177e4b5e Previously merged: - PR 541 will-moore 'Only add channel to tile request string if active' - PR 556 dependabot[bot] 'Bump webpack-dev-server from 5.2.6 to 6.0.0' - PR 554 dependabot[bot] 'Bump http-proxy-middleware from 2.0.9 to 2.0.10' - PR 553 dependabot[bot] 'Bump postcss from 8.5.10 to 8.5.25' - PR 552 dependabot[bot] 'Bump tmp from 0.2.6 to 0.2.7' - PR 551 dependabot[bot] 'Bump body-parser from 1.20.5 to 1.20.6' - PR 550 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.6' - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.4 to 1.10.0' - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' - PR 535 dependabot[bot] 'Bump tmp and eslint' - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' - PR 529 will-moore 'Image id and roi id initial params' - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 471 will-moore 'Z projection disabled tooltip' - PR 546 will-moore 'Use POST data for saveImgRdef params' Conflicting PRs (not included): - PR 532 will-moore 'Zarr layers' Generated by OMERO-plugins-push#26 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/)' 2026-08-01 12:09:11,336 [ scc.git] DEBUG [detached HEAD c000d7a5] merge master -Dorg -Ssuccess-only 2026-08-01 12:09:11,338 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:09:11,338 [ scc.repo] DEBUG ## PRs found: 2026-08-01 12:09:11,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2026-08-01 12:09:12,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2026-08-01 12:09:12,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2026-08-01 12:09:12,832 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-01 12:09:13,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-08-01 12:09:14,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:09:14,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-01 12:09:15,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-08-01 12:09:15,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:09:15,660 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-01 12:09:16,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2026-08-01 12:09:16,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-08-01 12:09:17,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:09:17,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-08-01 12:09:18,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:09:18,312 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-01 12:09:18,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2026-08-01 12:09:19,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2026-08-01 12:09:19,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322?page=1 HTTP/1.1" 200 None 2026-08-01 12:09:20,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:09:21,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322?page=1 HTTP/1.1" 200 None 2026-08-01 12:09:21,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:09:21,586 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2026-08-01 12:09:21,586 [ scc.repo] DEBUG ## Branches found: 2026-08-01 12:09:21,586 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-08-01 12:09:21,587 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:09:21,587 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:09:21,606 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-01 12:09:21,626 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-01 12:09:21,626 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-01 12:09:21,649 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-01 12:09:21,715 [ scc.git] DEBUG Already up to date. 2026-08-01 12:09:21,715 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-08-01 12:09:22,123 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-08-01 12:09:22,123 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-08-01 12:09:22,148 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2026-08-01 12:09:22,607 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-08-01 12:09:22,607 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2026-08-01 12:09:22,627 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2026-08-01 12:09:23,007 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-08-01 12:09:23,007 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2026-08-01 12:09:23,031 [ scc.git] DEBUG ## Unique users: [] 2026-08-01 12:09:23,031 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:09:23,031 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:09:23,047 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-08-01 12:09:23,074 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:09:23,088 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-08-01 12:09:23,330 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:09:23,405 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2026-08-01 12:09:23,405 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2026-08-01 12:09:23,405 [ scc.git] DEBUG requirements.txt | 2 +- 2026-08-01 12:09:23,406 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2026-08-01 12:09:23,406 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2026-08-01 12:09:23,406 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2026-08-01 12:09:23,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:09:23,592 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-08-01 12:09:23,635 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:09:23,649 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-08-01 12:09:23,868 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:09:23,937 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-01 12:09:23,937 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-01 12:09:24,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:09:24,123 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-08-01 12:09:24,162 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:09:24,179 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-08-01 12:09:24,390 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-08-01 12:09:24,390 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-08-01 12:09:24,415 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-01 12:09:24,417 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-01 12:09:24,445 [ scc.git] DEBUG Calling 'git reset --hard 6f98a47444ba12e4137b02c83a7209076895182a' 2026-08-01 12:09:24,598 [ scc.git] DEBUG HEAD is now at 6f98a47 merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2026-08-01 12:09:24,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:09:24,920 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-08-01 12:09:24,958 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2026-08-01 12:09:24,979 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#26](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2026-08-01 12:09:24,989 [ scc.config] DEBUG Found github.token 2026-08-01 12:09:24,989 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2026-08-01 12:09:24,990 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-01 12:09:25,105 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:09:25,105 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:09:25,123 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:09:25,233 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-01 12:09:25,302 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f15c00d4f50> has no local changes 2026-08-01 12:09:25,302 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#26 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/)' 2026-08-01 12:09:25,531 [ scc.git] DEBUG [detached HEAD e41e17e] merge master -Dorg -Ssuccess-only 2026-08-01 12:09:25,533 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:09:25,533 [ scc.repo] DEBUG ## PRs found: 2026-08-01 12:09:25,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2026-08-01 12:09:26,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None 2026-08-01 12:09:27,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None 2026-08-01 12:09:27,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-08-01 12:09:28,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:09:28,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-08-01 12:09:29,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:09:29,113 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-08-01 12:09:29,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2026-08-01 12:09:30,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2026-08-01 12:09:30,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-08-01 12:09:31,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:09:31,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-08-01 12:09:32,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:09:32,152 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-08-01 12:09:32,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2026-08-01 12:09:33,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2026-08-01 12:09:33,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-08-01 12:09:34,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:09:34,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-08-01 12:09:35,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:09:35,186 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-08-01 12:09:35,186 [ scc.repo] DEBUG ## Branches found: 2026-08-01 12:09:35,186 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-08-01 12:09:35,187 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:09:35,187 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:09:35,205 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-01 12:09:35,226 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-01 12:09:35,226 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-01 12:09:35,251 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-01 12:09:35,402 [ scc.git] DEBUG Updating 3cd120c..55060a2 2026-08-01 12:09:36,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2026-08-01 12:09:36,131 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2026-08-01 12:09:36,753 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-08-01 12:09:36,753 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2026-08-01 12:09:36,789 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2026-08-01 12:09:37,407 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-08-01 12:09:37,407 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2026-08-01 12:09:37,433 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head' 2026-08-01 12:09:37,834 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-08-01 12:09:37,834 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD 2026-08-01 12:09:37,859 [ scc.git] DEBUG ## Unique users: [] 2026-08-01 12:09:37,859 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:09:37,859 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:09:37,874 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-08-01 12:09:37,921 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:09:37,938 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-08-01 12:09:38,187 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2026-08-01 12:09:38,187 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2026-08-01 12:09:38,187 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-08-01 12:09:38,187 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-08-01 12:09:38,211 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-01 12:09:38,212 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-01 12:09:38,241 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-08-01 12:09:38,388 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-08-01 12:09:38,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:09:38,568 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-08-01 12:09:38,602 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2026-08-01 12:09:38,623 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#26](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2026-08-01 12:09:38,634 [ scc.config] DEBUG Found github.token 2026-08-01 12:09:38,635 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2026-08-01 12:09:38,635 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2026-08-01 12:09:38,679 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:09:38,691 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2026-08-01 12:09:38,912 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-08-01 12:09:38,912 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-08-01 12:09:38,912 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2026-08-01 12:09:38,932 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-01 12:09:38,934 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-01 12:09:38,964 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-08-01 12:09:39,096 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-08-01 12:09:39,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:09:39,279 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2026-08-01 12:09:39,315 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2026-08-01 12:09:39,337 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#26](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2026-08-01 12:09:39,349 [ scc.config] DEBUG Found github.token 2026-08-01 12:09:39,349 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2026-08-01 12:09:39,349 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-08-01 12:09:39,375 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:09:39,388 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-08-01 12:09:39,573 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:09:39,632 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++- 2026-08-01 12:09:39,632 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-) 2026-08-01 12:09:39,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:09:39,803 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-01 12:09:39,926 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:09:39,926 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:09:39,941 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:09:40,042 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-01 12:09:40,101 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f15c0099510> has no local changes 2026-08-01 12:09:40,101 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#26 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/)' 2026-08-01 12:09:40,241 [ scc.git] DEBUG [detached HEAD dfe1b08] merge master -Dorg -Ssuccess-only 2026-08-01 12:09:40,243 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:09:40,243 [ scc.repo] DEBUG ## PRs found: 2026-08-01 12:09:40,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2026-08-01 12:09:41,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2026-08-01 12:09:41,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-08-01 12:09:42,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:09:42,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-08-01 12:09:43,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:09:43,405 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-01 12:09:43,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2026-08-01 12:09:43,869 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-01 12:09:44,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-08-01 12:09:45,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:09:45,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-08-01 12:09:46,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:09:46,121 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-08-01 12:09:46,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2026-08-01 12:09:46,611 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-01 12:09:47,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-08-01 12:09:47,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:09:48,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-08-01 12:09:48,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:09:48,834 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-08-01 12:09:49,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2026-08-01 12:09:49,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2026-08-01 12:09:50,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2026-08-01 12:09:50,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2026-08-01 12:09:51,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2026-08-01 12:09:52,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2026-08-01 12:09:52,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2026-08-01 12:09:52,558 [ scc.repo] DEBUG ## Branches found: 2026-08-01 12:09:52,558 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-08-01 12:09:52,558 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:09:52,558 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:09:52,575 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-01 12:09:52,595 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-01 12:09:52,595 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-01 12:09:52,618 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-01 12:09:52,676 [ scc.git] DEBUG Already up to date. 2026-08-01 12:09:52,676 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2026-08-01 12:09:53,076 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-08-01 12:09:53,077 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2026-08-01 12:09:53,100 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2026-08-01 12:09:53,494 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-08-01 12:09:53,495 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2026-08-01 12:09:53,519 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2026-08-01 12:09:53,952 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-08-01 12:09:53,952 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2026-08-01 12:09:53,978 [ scc.git] DEBUG ## Unique users: [] 2026-08-01 12:09:53,978 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:09:53,978 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:09:53,994 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2026-08-01 12:09:54,020 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:09:54,035 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2026-08-01 12:09:54,267 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:09:54,332 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2026-08-01 12:09:54,333 [ scc.git] DEBUG package.json | 2 +- 2026-08-01 12:09:54,333 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2026-08-01 12:09:54,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:09:54,511 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2026-08-01 12:09:54,544 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:09:54,558 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2026-08-01 12:09:54,743 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-01 12:09:54,743 [ scc.git] DEBUG Auto-merging package.json 2026-08-01 12:09:54,821 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:09:54,890 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2026-08-01 12:09:54,890 [ scc.git] DEBUG package.json | 2 +- 2026-08-01 12:09:54,890 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-08-01 12:09:55,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:09:55,076 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-08-01 12:09:55,117 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:09:55,132 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-08-01 12:09:55,347 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:09:55,414 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-01 12:09:55,414 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-01 12:09:55,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:09:55,629 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-01 12:09:55,739 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:09:55,739 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:09:55,752 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:09:55,851 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-01 12:09:55,914 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f15c0327410> has no local changes 2026-08-01 12:09:55,915 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#26 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/)' 2026-08-01 12:09:56,046 [ scc.git] DEBUG [detached HEAD 78fb742] merge master -Dorg -Ssuccess-only 2026-08-01 12:09:56,048 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:09:56,048 [ scc.repo] DEBUG ## PRs found: 2026-08-01 12:09:56,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2026-08-01 12:09:56,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2026-08-01 12:09:56,799 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-01 12:09:57,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-08-01 12:09:58,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:09:58,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-01 12:09:59,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-08-01 12:09:59,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:09:59,492 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-01 12:09:59,492 [ scc.repo] DEBUG ## Branches found: 2026-08-01 12:09:59,492 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-08-01 12:09:59,493 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:09:59,493 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:09:59,508 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-01 12:09:59,524 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-01 12:09:59,524 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-01 12:09:59,542 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-01 12:09:59,592 [ scc.git] DEBUG Already up to date. 2026-08-01 12:09:59,592 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2026-08-01 12:10:00,001 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2026-08-01 12:10:00,001 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2026-08-01 12:10:00,024 [ scc.git] DEBUG ## Unique users: [] 2026-08-01 12:10:00,025 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:00,025 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:00,038 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2026-08-01 12:10:00,063 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:00,076 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2026-08-01 12:10:00,250 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:10:00,309 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-01 12:10:00,309 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-01 12:10:00,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:10:00,497 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-01 12:10:00,610 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:00,610 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:00,624 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:10:00,725 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-01 12:10:00,777 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f15c011a650> has no local changes 2026-08-01 12:10:00,777 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#26 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/)' 2026-08-01 12:10:00,904 [ scc.git] DEBUG [detached HEAD 6027be2] merge master -Dorg -Ssuccess-only 2026-08-01 12:10:00,906 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:10:00,906 [ scc.repo] DEBUG ## PRs found: 2026-08-01 12:10:01,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2026-08-01 12:10:02,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2026-08-01 12:10:02,025 [ scc.repo] DEBUG ## Branches found: 2026-08-01 12:10:02,025 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-08-01 12:10:02,026 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:02,026 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:02,043 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-01 12:10:02,059 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-01 12:10:02,059 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-01 12:10:02,089 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-01 12:10:02,304 [ scc.git] DEBUG Updating bdfeb5e..fc9ff96 2026-08-01 12:10:02,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/36 HTTP/1.1" 200 None 2026-08-01 12:10:03,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/35 HTTP/1.1" 200 None 2026-08-01 12:10:03,989 [ scc.git] DEBUG ## Unique users: [] 2026-08-01 12:10:03,989 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:03,990 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:04,010 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-01 12:10:04,128 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:04,128 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:04,142 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:10:04,258 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-01 12:10:04,329 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f15c0324c50> has no local changes 2026-08-01 12:10:04,329 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Generated by OMERO-plugins-push#26 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/)' 2026-08-01 12:10:04,467 [ scc.git] DEBUG [detached HEAD 77a43ee] merge master -Dorg -Ssuccess-only 2026-08-01 12:10:04,469 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:10:04,469 [ scc.repo] DEBUG ## PRs found: 2026-08-01 12:10:04,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2026-08-01 12:10:05,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2026-08-01 12:10:05,315 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-01 12:10:06,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-08-01 12:10:06,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:10:07,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-01 12:10:07,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-08-01 12:10:08,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:10:08,093 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-01 12:10:08,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2026-08-01 12:10:09,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2026-08-01 12:10:09,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-08-01 12:10:10,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:10:10,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-08-01 12:10:11,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:10:11,299 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2026-08-01 12:10:11,300 [ scc.repo] DEBUG ## Branches found: 2026-08-01 12:10:11,300 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-08-01 12:10:11,300 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:11,300 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:11,321 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-01 12:10:11,340 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-01 12:10:11,341 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-01 12:10:11,365 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-01 12:10:11,428 [ scc.git] DEBUG Already up to date. 2026-08-01 12:10:11,428 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-08-01 12:10:12,049 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-08-01 12:10:12,049 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-08-01 12:10:12,074 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-08-01 12:10:12,475 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-08-01 12:10:12,475 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-08-01 12:10:12,498 [ scc.git] DEBUG ## Unique users: [] 2026-08-01 12:10:12,498 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:12,498 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:12,513 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-08-01 12:10:12,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:12,563 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-08-01 12:10:12,806 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2026-08-01 12:10:12,806 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2026-08-01 12:10:12,806 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2026-08-01 12:10:12,806 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2026-08-01 12:10:12,806 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2026-08-01 12:10:12,806 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2026-08-01 12:10:12,806 [ scc.git] DEBUG Auto-merging setup.py 2026-08-01 12:10:12,807 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2026-08-01 12:10:12,830 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-01 12:10:12,831 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-01 12:10:12,871 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2026-08-01 12:10:13,046 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2026-08-01 12:10:13,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:10:13,226 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-08-01 12:10:13,253 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2026-08-01 12:10:13,279 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#26](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - setup.py - omero_signup/views.py - omero_signup/signup_settings.py --conflicts 2026-08-01 12:10:13,292 [ scc.config] DEBUG Found github.token 2026-08-01 12:10:13,292 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2026-08-01 12:10:13,292 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-08-01 12:10:13,316 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:13,330 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-08-01 12:10:13,505 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:10:13,570 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-01 12:10:13,570 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-01 12:10:13,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:10:13,757 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-01 12:10:13,866 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:13,866 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:13,879 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:10:13,980 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-01 12:10:14,036 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f15c01566d0> has no local changes 2026-08-01 12:10:14,036 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#26 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/)' 2026-08-01 12:10:14,175 [ scc.git] DEBUG [detached HEAD 1137e38] merge master -Dorg -Ssuccess-only 2026-08-01 12:10:14,177 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:10:14,177 [ scc.repo] DEBUG ## PRs found: 2026-08-01 12:10:14,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2026-08-01 12:10:15,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2026-08-01 12:10:15,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2026-08-01 12:10:16,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2026-08-01 12:10:16,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-08-01 12:10:17,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:10:17,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-08-01 12:10:18,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/c18c080227e97899382d3464baa7c7885a621623?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:10:18,358 [ scc.repo] DEBUG - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-08-01 12:10:18,359 [ scc.repo] DEBUG ## Branches found: 2026-08-01 12:10:18,359 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-08-01 12:10:18,359 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:18,359 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:18,381 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-01 12:10:18,403 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-01 12:10:18,403 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-01 12:10:18,429 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-01 12:10:18,597 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2026-08-01 12:10:19,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2026-08-01 12:10:19,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2026-08-01 12:10:20,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2026-08-01 12:10:20,846 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-08-01 12:10:21,313 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2026-08-01 12:10:21,313 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-08-01 12:10:21,335 [ scc.git] DEBUG ## Unique users: [] 2026-08-01 12:10:21,335 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:21,335 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:21,349 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c18c080227e97899382d3464baa7c7885a621623' 2026-08-01 12:10:21,391 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:21,407 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (Add 'ms' target for ./docker) c18c080227e97899382d3464baa7c7885a621623' 2026-08-01 12:10:21,628 [ scc.git] DEBUG Auto-merging .github/workflows/main.yml 2026-08-01 12:10:21,724 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:10:21,814 [ scc.git] DEBUG .github/workflows/main.yml | 8 ++++++++ 2026-08-01 12:10:21,814 [ scc.git] DEBUG docker | 22 ++++++++++++++++++++++ 2026-08-01 12:10:21,814 [ scc.git] DEBUG ms/compose.yml | 11 +++++++++++ 2026-08-01 12:10:21,814 [ scc.git] DEBUG ms/example/Dockerfile | 13 +++++++++++++ 2026-08-01 12:10:21,815 [ scc.git] DEBUG ms/test | 2 ++ 2026-08-01 12:10:21,815 [ scc.git] DEBUG 5 files changed, 56 insertions(+) 2026-08-01 12:10:21,815 [ scc.git] DEBUG create mode 100644 ms/compose.yml 2026-08-01 12:10:21,815 [ scc.git] DEBUG create mode 100644 ms/example/Dockerfile 2026-08-01 12:10:21,815 [ scc.git] DEBUG create mode 100755 ms/test 2026-08-01 12:10:22,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:10:22,033 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-01 12:10:22,146 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:22,146 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:22,160 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:10:22,262 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-01 12:10:22,338 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f15c0325e50> has no local changes 2026-08-01 12:10:22,338 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Generated by OMERO-plugins-push#26 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/)' 2026-08-01 12:10:22,464 [ scc.git] DEBUG [detached HEAD 0bd406b] merge master -Dorg -Ssuccess-only 2026-08-01 12:10:22,466 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:10:22,466 [ scc.repo] DEBUG ## PRs found: 2026-08-01 12:10:22,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2026-08-01 12:10:23,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2026-08-01 12:10:23,422 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-01 12:10:24,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-08-01 12:10:24,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:10:25,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-01 12:10:25,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-08-01 12:10:26,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:10:26,361 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-01 12:10:26,361 [ scc.repo] DEBUG ## Branches found: 2026-08-01 12:10:26,361 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-08-01 12:10:26,362 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:26,362 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:26,383 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-01 12:10:26,404 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-01 12:10:26,405 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-01 12:10:26,428 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-01 12:10:26,489 [ scc.git] DEBUG Already up to date. 2026-08-01 12:10:26,489 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-08-01 12:10:26,900 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2026-08-01 12:10:26,900 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-08-01 12:10:26,923 [ scc.git] DEBUG ## Unique users: [] 2026-08-01 12:10:26,923 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:26,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:26,936 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-08-01 12:10:26,964 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:26,977 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-08-01 12:10:27,150 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:10:27,205 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-01 12:10:27,205 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-01 12:10:27,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:10:27,396 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-01 12:10:27,514 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:27,514 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:27,526 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:10:27,630 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-01 12:10:27,680 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f159c706850> has no local changes 2026-08-01 12:10:27,681 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#26 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/)' 2026-08-01 12:10:27,857 [ scc.git] DEBUG [detached HEAD 560132d] merge master -Dorg -Ssuccess-only 2026-08-01 12:10:27,859 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:10:27,859 [ scc.repo] DEBUG ## PRs found: 2026-08-01 12:10:28,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2026-08-01 12:10:28,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2026-08-01 12:10:28,620 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-01 12:10:29,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-08-01 12:10:29,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:10:30,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-01 12:10:30,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-08-01 12:10:31,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:10:31,354 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-01 12:10:31,354 [ scc.repo] DEBUG ## Branches found: 2026-08-01 12:10:31,355 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-08-01 12:10:31,355 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:31,355 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:31,376 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-01 12:10:31,396 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-01 12:10:31,396 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-01 12:10:31,421 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-01 12:10:31,598 [ scc.git] DEBUG Updating deab817..160d894 2026-08-01 12:10:32,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2026-08-01 12:10:32,292 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-08-01 12:10:32,687 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2026-08-01 12:10:32,687 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-08-01 12:10:32,708 [ scc.git] DEBUG ## Unique users: [] 2026-08-01 12:10:32,708 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:32,708 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:32,722 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-08-01 12:10:32,744 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:32,756 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-08-01 12:10:32,926 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:10:32,995 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-01 12:10:32,995 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-01 12:10:33,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:10:33,190 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-01 12:10:33,319 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:33,319 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:33,334 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:10:33,467 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-01 12:10:33,529 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f15c0185ad0> has no local changes 2026-08-01 12:10:33,529 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#26 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/)' 2026-08-01 12:10:33,727 [ scc.git] DEBUG [detached HEAD 0647036] merge master -Dorg -Ssuccess-only 2026-08-01 12:10:33,729 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:10:33,729 [ scc.git] INFO Overriding base-branch from master to main 2026-08-01 12:10:33,729 [ scc.repo] DEBUG ## PRs found: 2026-08-01 12:10:34,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2026-08-01 12:10:34,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2026-08-01 12:10:35,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2026-08-01 12:10:35,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-08-01 12:10:36,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:10:36,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-01 12:10:37,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-08-01 12:10:37,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:10:37,637 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2026-08-01 12:10:38,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2026-08-01 12:10:38,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2026-08-01 12:10:39,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2026-08-01 12:10:39,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-08-01 12:10:40,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:10:40,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-08-01 12:10:41,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:10:41,381 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-08-01 12:10:41,381 [ scc.repo] DEBUG ## Branches found: 2026-08-01 12:10:41,381 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-08-01 12:10:41,382 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:41,382 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:41,404 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2026-08-01 12:10:41,426 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-01 12:10:41,426 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2026-08-01 12:10:41,454 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2026-08-01 12:10:41,599 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2026-08-01 12:10:42,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2026-08-01 12:10:43,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2026-08-01 12:10:43,143 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2026-08-01 12:10:43,630 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-08-01 12:10:43,631 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2026-08-01 12:10:43,653 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2026-08-01 12:10:44,300 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-08-01 12:10:44,300 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2026-08-01 12:10:44,325 [ scc.git] DEBUG ## Unique users: [] 2026-08-01 12:10:44,325 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:44,325 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:44,338 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-08-01 12:10:44,369 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:44,381 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-08-01 12:10:44,600 [ scc.git] DEBUG Auto-merging README.rst 2026-08-01 12:10:44,600 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2026-08-01 12:10:44,600 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2026-08-01 12:10:44,600 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-08-01 12:10:44,628 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-01 12:10:44,629 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-01 12:10:44,670 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-08-01 12:10:44,819 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-08-01 12:10:45,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:10:45,161 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-08-01 12:10:45,190 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-08-01 12:10:45,215 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#26](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2026-08-01 12:10:45,227 [ scc.config] DEBUG Found github.token 2026-08-01 12:10:45,228 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2026-08-01 12:10:45,228 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-08-01 12:10:45,278 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:45,292 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-08-01 12:10:45,512 [ scc.git] DEBUG Auto-merging README.rst 2026-08-01 12:10:45,512 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-08-01 12:10:45,585 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:10:45,668 [ scc.git] DEBUG README.rst | 3 + 2026-08-01 12:10:45,669 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2026-08-01 12:10:45,669 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2026-08-01 12:10:45,669 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2026-08-01 12:10:45,669 [ scc.git] DEBUG setup.py | 5 +- 2026-08-01 12:10:45,669 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2026-08-01 12:10:45,669 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2026-08-01 12:10:45,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:10:45,861 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-01 12:10:45,995 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:45,995 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:46,012 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:10:46,125 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-01 12:10:46,197 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f15c016fd10> has no local changes 2026-08-01 12:10:46,197 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#26 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/)' 2026-08-01 12:10:46,363 [ scc.git] DEBUG [detached HEAD ce3deef] merge master -Dorg -Ssuccess-only 2026-08-01 12:10:46,364 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:10:46,364 [ scc.repo] DEBUG ## PRs found: 2026-08-01 12:10:46,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2026-08-01 12:10:47,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2026-08-01 12:10:47,147 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-01 12:10:47,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-08-01 12:10:48,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:10:48,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-01 12:10:49,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-08-01 12:10:50,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:10:50,163 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-01 12:10:50,164 [ scc.repo] DEBUG ## Branches found: 2026-08-01 12:10:50,164 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-08-01 12:10:50,164 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:50,164 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:50,186 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-01 12:10:50,207 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-01 12:10:50,207 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-01 12:10:50,232 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-01 12:10:50,295 [ scc.git] DEBUG Already up to date. 2026-08-01 12:10:50,296 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2026-08-01 12:10:50,719 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2026-08-01 12:10:50,719 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2026-08-01 12:10:50,742 [ scc.git] DEBUG ## Unique users: [] 2026-08-01 12:10:50,742 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:50,742 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:50,756 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-08-01 12:10:50,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:50,792 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-08-01 12:10:50,977 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:10:51,044 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-01 12:10:51,044 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-01 12:10:51,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:10:51,402 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-01 12:10:51,536 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:51,536 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:51,560 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:10:51,681 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-01 12:10:51,733 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f15c00feb50> has no local changes 2026-08-01 12:10:51,733 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#26 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/)' 2026-08-01 12:10:51,875 [ scc.git] DEBUG [detached HEAD 1913a91] merge master -Dorg -Ssuccess-only 2026-08-01 12:10:51,877 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:10:51,877 [ scc.repo] DEBUG ## PRs found: 2026-08-01 12:10:52,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2026-08-01 12:10:52,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2026-08-01 12:10:52,646 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-01 12:10:53,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-08-01 12:10:53,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:10:54,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-01 12:10:54,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-08-01 12:10:55,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:10:55,367 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-01 12:10:55,367 [ scc.repo] DEBUG ## Branches found: 2026-08-01 12:10:55,368 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-08-01 12:10:55,368 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:55,368 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:55,389 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-01 12:10:55,411 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-01 12:10:55,411 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-01 12:10:55,436 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-01 12:10:55,509 [ scc.git] DEBUG Already up to date. 2026-08-01 12:10:55,509 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2026-08-01 12:10:55,919 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2026-08-01 12:10:55,919 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2026-08-01 12:10:55,949 [ scc.git] DEBUG ## Unique users: [] 2026-08-01 12:10:55,949 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:55,949 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:55,965 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-08-01 12:10:55,987 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:55,999 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-08-01 12:10:56,194 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:10:56,256 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-01 12:10:56,256 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-01 12:10:56,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:10:56,522 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-01 12:10:56,653 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:56,653 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:56,669 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:10:56,789 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-01 12:10:56,847 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f15c0326d10> has no local changes 2026-08-01 12:10:56,847 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#26 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/)' 2026-08-01 12:10:56,998 [ scc.git] DEBUG [detached HEAD c915608] merge master -Dorg -Ssuccess-only 2026-08-01 12:10:57,000 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:10:57,000 [ scc.repo] DEBUG ## PRs found: 2026-08-01 12:10:57,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2026-08-01 12:10:57,223 [ scc.repo] DEBUG ## Branches found: 2026-08-01 12:10:57,223 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-08-01 12:10:57,223 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:57,223 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:57,242 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-01 12:10:57,265 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-01 12:10:57,266 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-01 12:10:57,291 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-01 12:10:57,353 [ scc.git] DEBUG Already up to date. 2026-08-01 12:10:57,353 [ scc.git] DEBUG ## Unique users: [] 2026-08-01 12:10:57,353 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:57,353 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:57,372 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-01 12:10:57,491 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:10:57,491 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:10:57,508 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:10:57,611 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-01 12:10:57,710 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f159c73e890> has no local changes 2026-08-01 12:10:57,710 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#26 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/)' 2026-08-01 12:10:57,855 [ scc.git] DEBUG [detached HEAD 4329419] merge master -Dorg -Ssuccess-only 2026-08-01 12:10:57,857 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:10:57,857 [ scc.git] INFO Overriding base-branch from master to develop 2026-08-01 12:10:57,857 [ scc.repo] DEBUG ## PRs found: 2026-08-01 12:10:58,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2026-08-01 12:10:58,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/232 HTTP/1.1" 200 None 2026-08-01 12:10:59,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None 2026-08-01 12:10:59,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-01 12:11:00,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-01 12:11:00,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None 2026-08-01 12:11:01,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/e190baa635f40826befc84321719243092ee849f?per_page=1 HTTP/1.1" 200 2 2026-08-01 12:11:01,104 [ scc.repo] DEBUG - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' 2026-08-01 12:11:01,104 [ scc.repo] DEBUG ## Branches found: 2026-08-01 12:11:01,104 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-08-01 12:11:01,105 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:11:01,105 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:11:01,123 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-08-01 12:11:01,146 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-01 12:11:01,146 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-08-01 12:11:01,184 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-08-01 12:11:01,489 [ scc.git] DEBUG Updating 4b4c755..5b4d768 2026-08-01 12:11:01,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-08-01 12:11:02,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-08-01 12:11:03,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-08-01 12:11:04,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-08-01 12:11:05,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2026-08-01 12:11:05,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2026-08-01 12:11:06,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2026-08-01 12:11:06,839 [ scc.git] DEBUG Calling 'git fetch origin pull/232/head' 2026-08-01 12:11:07,384 [ scc.git] DEBUG From https://github.com/ome/scripts 2026-08-01 12:11:07,384 [ scc.git] DEBUG * branch refs/pull/232/head -> FETCH_HEAD 2026-08-01 12:11:07,410 [ scc.git] DEBUG ## Unique users: [] 2026-08-01 12:11:07,410 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:11:07,410 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:11:07,427 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e190baa635f40826befc84321719243092ee849f' 2026-08-01 12:11:07,468 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:11:07,484 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 232 (Add Auto header detection to `Populate_Metadata.py`) e190baa635f40826befc84321719243092ee849f' 2026-08-01 12:11:07,727 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-01 12:11:07,796 [ scc.git] DEBUG omero/import_scripts/Populate_Metadata.py | 26 ++++++++++++++++++++++++-- 2026-08-01 12:11:07,796 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2026-08-01 12:11:07,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:11:07,985 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-01 12:11:08,115 [ scc.git] DEBUG Get sha1 of %s 2026-08-01 12:11:08,115 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-01 12:11:08,130 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:11:08,253 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-01 12:11:08,325 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f159c726050> has no local changes 2026-08-01 12:11:08,325 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' Generated by OMERO-plugins-push#26 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/)' 2026-08-01 12:11:08,476 [ scc.git] DEBUG [detached HEAD 8078afc] merge master -Dorg -Ssuccess-only 2026-08-01 12:11:08,478 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:11:08,478 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-01 12:11:08,716 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2026-08-01 12:11:08,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:11:08,947 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2026-08-01 12:11:08,955 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2026-08-01 12:11:09,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:11:09,378 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2026-08-01 12:11:09,386 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2026-08-01 12:11:09,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:11:09,809 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2026-08-01 12:11:09,818 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2026-08-01 12:11:10,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:11:10,253 [ scc.config] DEBUG Found submodule.omero-figure.url 2026-08-01 12:11:10,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:11:10,676 [ scc.config] DEBUG Found submodule.omero-figure.branch 2026-08-01 12:11:10,685 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2026-08-01 12:11:11,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:11:11,265 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2026-08-01 12:11:11,274 [ scc.config] DEBUG Found submodule.omero-gallery.url 2026-08-01 12:11:11,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:11:11,706 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2026-08-01 12:11:11,714 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2026-08-01 12:11:12,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:11:12,137 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2026-08-01 12:11:12,146 [ scc.config] DEBUG Found submodule.omero-mapr.url 2026-08-01 12:11:12,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:11:12,575 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2026-08-01 12:11:12,583 [ scc.config] DEBUG Found submodule.omero-metadata.url 2026-08-01 12:11:12,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:11:13,008 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2026-08-01 12:11:13,015 [ scc.config] DEBUG Found submodule.omero-parade.url 2026-08-01 12:11:13,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:11:13,448 [ scc.config] DEBUG Found submodule.omero-parade.branch 2026-08-01 12:11:13,455 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2026-08-01 12:11:13,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:11:13,878 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2026-08-01 12:11:13,887 [ scc.config] DEBUG Found submodule.omero-rois.url 2026-08-01 12:11:14,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:11:14,325 [ scc.config] DEBUG Found submodule.omero-signup.url 2026-08-01 12:11:14,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:11:14,767 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2026-08-01 12:11:15,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:11:15,198 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2026-08-01 12:11:15,208 [ scc.config] DEBUG Found submodule.omero-upload.url 2026-08-01 12:11:15,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:11:15,638 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2026-08-01 12:11:16,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:11:16,069 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2026-08-01 12:11:16,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:11:16,498 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2026-08-01 12:11:16,507 [ scc.config] DEBUG Found submodule.omero-weberror.url 2026-08-01 12:11:17,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:11:17,087 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2026-08-01 12:11:17,096 [ scc.config] DEBUG Found submodule.omero-webtest.url 2026-08-01 12:11:17,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:11:17,516 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2026-08-01 12:11:17,525 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2026-08-01 12:11:17,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:11:17,946 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2026-08-01 12:11:17,955 [ scc.config] DEBUG Found submodule.scripts.url 2026-08-01 12:11:18,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-01 12:11:18,380 [ scc.config] DEBUG Found submodule.scripts.branch 2026-08-01 12:11:18,381 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-01 12:11:20,337 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f15c1179ed0> has local changes 2026-08-01 12:11:20,337 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' - PR 196 will-moore 'Storage options only if needed' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Updating 9cc36cde..18887279 Previously merged: - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' - PR 691 dependabot[bot] 'Bump esbuild and vite' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 692 will-moore 'colorbar lut background fix' - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' - PR 696 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.12' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7a798cee..177e4b5e Previously merged: - PR 541 will-moore 'Only add channel to tile request string if active' - PR 556 dependabot[bot] 'Bump webpack-dev-server from 5.2.6 to 6.0.0' - PR 554 dependabot[bot] 'Bump http-proxy-middleware from 2.0.9 to 2.0.10' - PR 553 dependabot[bot] 'Bump postcss from 8.5.10 to 8.5.25' - PR 552 dependabot[bot] 'Bump tmp from 0.2.6 to 0.2.7' - PR 551 dependabot[bot] 'Bump body-parser from 1.20.5 to 1.20.6' - PR 550 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.6' - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.4 to 1.10.0' - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' - PR 535 dependabot[bot] 'Bump tmp and eslint' - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' - PR 529 will-moore 'Image id and roi id initial params' - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 471 will-moore 'Z projection disabled tooltip' - PR 546 will-moore 'Use POST data for saveImgRdef params' Conflicting PRs (not included): - PR 532 will-moore 'Zarr layers' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' Generated by OMERO-plugins-push#26 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/26/)' 2026-08-01 12:11:20,898 [ scc.git] DEBUG [detached HEAD 24817f7] merge master -Dorg -Ssuccess-only 2026-08-01 12:11:20,898 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2026-08-01 12:11:20,900 [ scc.merge] INFO Repository: ome/omero-plugins 2026-08-01 12:11:20,900 [ scc.merge] INFO Already up to date. 2026-08-01 12:11:20,900 [ scc.merge] INFO 2026-08-01 12:11:20,900 [ scc.merge] INFO Merged PRs: 2026-08-01 12:11:20,900 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-08-01 12:11:20,900 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-08-01 12:11:20,900 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-08-01 12:11:20,900 [ scc.merge] INFO 2026-08-01 12:11:20,900 [ scc.merge] INFO Repository: ome/minimal-omero-client 2026-08-01 12:11:20,900 [ scc.merge] INFO Already up to date. 2026-08-01 12:11:20,900 [ scc.merge] INFO 2026-08-01 12:11:20,900 [ scc.merge] INFO 2026-08-01 12:11:20,900 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2026-08-01 12:11:20,900 [ scc.merge] INFO Excluded PRs: 2026-08-01 12:11:20,900 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2026-08-01 12:11:20,900 [ scc.merge] INFO Already up to date. 2026-08-01 12:11:20,900 [ scc.merge] INFO 2026-08-01 12:11:20,900 [ scc.merge] INFO Merged PRs: 2026-08-01 12:11:20,900 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-01 12:11:20,900 [ scc.merge] INFO 2026-08-01 12:11:20,900 [ scc.merge] INFO Repository: ome/omero-cli-render 2026-08-01 12:11:20,900 [ scc.merge] INFO Excluded PRs: 2026-08-01 12:11:20,900 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2026-08-01 12:11:20,900 [ scc.merge] INFO Updating ce6e13c..68b7303 2026-08-01 12:11:20,900 [ scc.merge] INFO Previously merged: 2026-08-01 12:11:20,900 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2026-08-01 12:11:20,900 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2026-08-01 12:11:20,900 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2026-08-01 12:11:20,900 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2026-08-01 12:11:20,900 [ scc.merge] INFO 2026-08-01 12:11:20,900 [ scc.merge] INFO Merged PRs: 2026-08-01 12:11:20,900 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2026-08-01 12:11:20,900 [ scc.merge] INFO 2026-08-01 12:11:20,900 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2026-08-01 12:11:20,900 [ scc.merge] INFO Excluded PRs: 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' (exclude comment) 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2026-08-01 12:11:20,901 [ scc.merge] INFO Updating 11d3587..9f844b8 2026-08-01 12:11:20,901 [ scc.merge] INFO Previously merged: 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 192 jburel 'Set Omero pixel size' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-01 12:11:20,901 [ scc.merge] INFO 2026-08-01 12:11:20,901 [ scc.merge] INFO Merged PRs: 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 193 dominikl 'Only parse import uris if stated' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 196 will-moore 'Storage options only if needed' 2026-08-01 12:11:20,901 [ scc.merge] INFO 2026-08-01 12:11:20,901 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-08-01 12:11:20,901 [ scc.merge] INFO 2026-08-01 12:11:20,901 [ scc.merge] INFO Repository: ome/omero-figure 2026-08-01 12:11:20,901 [ scc.merge] INFO Updating 9cc36cde..18887279 2026-08-01 12:11:20,901 [ scc.merge] INFO Previously merged: 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 691 dependabot[bot] 'Bump esbuild and vite' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 685 will-moore 'Fix static files links for release build' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 683 will-moore 'Add touch support for clicking on single panel' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 680 will-moore 'Use --pre install for export script in README' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 666 will-moore 'Standalone app' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 676 dependabot[bot] 'Bump picomatch' 2026-08-01 12:11:20,901 [ scc.merge] INFO - PR 669 will-moore 'Standalone python script' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 662 will-moore 'Export script handles OME-zarr images' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 663 will-moore 'Zarr' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 667 Tom-TBT 'Label suggestion interface' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 664 Nirkan 'Handle many channels ' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-01 12:11:20,902 [ scc.merge] INFO 2026-08-01 12:11:20,902 [ scc.merge] INFO Merged PRs: 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 692 will-moore 'colorbar lut background fix' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 696 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.12' 2026-08-01 12:11:20,902 [ scc.merge] INFO 2026-08-01 12:11:20,902 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2026-08-01 12:11:20,902 [ scc.merge] INFO Already up to date. 2026-08-01 12:11:20,902 [ scc.merge] INFO 2026-08-01 12:11:20,902 [ scc.merge] INFO Merged PRs: 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2026-08-01 12:11:20,902 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-01 12:11:20,902 [ scc.merge] INFO 2026-08-01 12:11:20,902 [ scc.merge] INFO Repository: ome/omero-gallery 2026-08-01 12:11:20,902 [ scc.merge] INFO Already up to date. 2026-08-01 12:11:20,902 [ scc.merge] INFO 2026-08-01 12:11:20,902 [ scc.merge] INFO Merged PRs: 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-08-01 12:11:20,903 [ scc.merge] INFO 2026-08-01 12:11:20,903 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-08-01 12:11:20,903 [ scc.merge] INFO 2026-08-01 12:11:20,903 [ scc.merge] INFO Repository: ome/omero-iviewer 2026-08-01 12:11:20,903 [ scc.merge] INFO Excluded PRs: 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2026-08-01 12:11:20,903 [ scc.merge] INFO Updating 7a798cee..177e4b5e 2026-08-01 12:11:20,903 [ scc.merge] INFO Previously merged: 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 541 will-moore 'Only add channel to tile request string if active' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 556 dependabot[bot] 'Bump webpack-dev-server from 5.2.6 to 6.0.0' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 554 dependabot[bot] 'Bump http-proxy-middleware from 2.0.9 to 2.0.10' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 553 dependabot[bot] 'Bump postcss from 8.5.10 to 8.5.25' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 552 dependabot[bot] 'Bump tmp from 0.2.6 to 0.2.7' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 551 dependabot[bot] 'Bump body-parser from 1.20.5 to 1.20.6' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 550 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.6' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.4 to 1.10.0' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 535 dependabot[bot] 'Bump tmp and eslint' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 529 will-moore 'Image id and roi id initial params' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 517 will-moore 'Fix roi link permissions' 2026-08-01 12:11:20,903 [ scc.merge] INFO - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' 2026-08-01 12:11:20,904 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2026-08-01 12:11:20,904 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-01 12:11:20,904 [ scc.merge] INFO 2026-08-01 12:11:20,904 [ scc.merge] INFO Merged PRs: 2026-08-01 12:11:20,904 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2026-08-01 12:11:20,904 [ scc.merge] INFO - PR 546 will-moore 'Use POST data for saveImgRdef params' 2026-08-01 12:11:20,904 [ scc.merge] INFO 2026-08-01 12:11:20,904 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-01 12:11:20,904 [ scc.merge] INFO - PR 532 will-moore 'Zarr layers' 2026-08-01 12:11:20,904 [ scc.merge] INFO 2026-08-01 12:11:20,904 [ scc.merge] INFO Repository: ome/omero-mapr 2026-08-01 12:11:20,904 [ scc.merge] INFO Excluded PRs: 2026-08-01 12:11:20,904 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2026-08-01 12:11:20,904 [ scc.merge] INFO Already up to date. 2026-08-01 12:11:20,904 [ scc.merge] INFO 2026-08-01 12:11:20,904 [ scc.merge] INFO Merged PRs: 2026-08-01 12:11:20,904 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2026-08-01 12:11:20,904 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-01 12:11:20,904 [ scc.merge] INFO 2026-08-01 12:11:20,904 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-01 12:11:20,904 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-01 12:11:20,904 [ scc.merge] INFO 2026-08-01 12:11:20,904 [ scc.merge] INFO Repository: ome/omero-metadata 2026-08-01 12:11:20,904 [ scc.merge] INFO Updating 3cd120c..55060a2 2026-08-01 12:11:20,904 [ scc.merge] INFO Previously merged: 2026-08-01 12:11:20,904 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-01 12:11:20,904 [ scc.merge] INFO 2026-08-01 12:11:20,904 [ scc.merge] INFO Merged PRs: 2026-08-01 12:11:20,904 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-08-01 12:11:20,904 [ scc.merge] INFO 2026-08-01 12:11:20,904 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-01 12:11:20,904 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-08-01 12:11:20,904 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-08-01 12:11:20,904 [ scc.merge] INFO 2026-08-01 12:11:20,904 [ scc.merge] INFO Repository: ome/omero-parade 2026-08-01 12:11:20,904 [ scc.merge] INFO Excluded PRs: 2026-08-01 12:11:20,904 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2026-08-01 12:11:20,904 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2026-08-01 12:11:20,904 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2026-08-01 12:11:20,904 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2026-08-01 12:11:20,904 [ scc.merge] INFO Already up to date. 2026-08-01 12:11:20,904 [ scc.merge] INFO 2026-08-01 12:11:20,904 [ scc.merge] INFO Merged PRs: 2026-08-01 12:11:20,904 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-08-01 12:11:20,904 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-08-01 12:11:20,904 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-01 12:11:20,904 [ scc.merge] INFO 2026-08-01 12:11:20,904 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2026-08-01 12:11:20,904 [ scc.merge] INFO Already up to date. 2026-08-01 12:11:20,904 [ scc.merge] INFO 2026-08-01 12:11:20,904 [ scc.merge] INFO Merged PRs: 2026-08-01 12:11:20,905 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-01 12:11:20,905 [ scc.merge] INFO 2026-08-01 12:11:20,905 [ scc.merge] INFO Repository: ome/omero-rois 2026-08-01 12:11:20,905 [ scc.merge] INFO Excluded PRs: 2026-08-01 12:11:20,905 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-08-01 12:11:20,905 [ scc.merge] INFO Updating bdfeb5e..fc9ff96 2026-08-01 12:11:20,905 [ scc.merge] INFO Previously merged: 2026-08-01 12:11:20,905 [ scc.merge] INFO - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' 2026-08-01 12:11:20,905 [ scc.merge] INFO - PR 35 will-moore 'Add roi to array functions' 2026-08-01 12:11:20,905 [ scc.merge] INFO 2026-08-01 12:11:20,905 [ scc.merge] INFO 2026-08-01 12:11:20,905 [ scc.merge] INFO Repository: ome/omero-signup 2026-08-01 12:11:20,905 [ scc.merge] INFO Already up to date. 2026-08-01 12:11:20,905 [ scc.merge] INFO 2026-08-01 12:11:20,905 [ scc.merge] INFO Merged PRs: 2026-08-01 12:11:20,905 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-01 12:11:20,905 [ scc.merge] INFO 2026-08-01 12:11:20,905 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-01 12:11:20,905 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2026-08-01 12:11:20,905 [ scc.merge] INFO 2026-08-01 12:11:20,905 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2026-08-01 12:11:20,905 [ scc.merge] INFO Excluded PRs: 2026-08-01 12:11:20,905 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2026-08-01 12:11:20,905 [ scc.merge] INFO Updating cda3ec6..c8a0015 2026-08-01 12:11:20,905 [ scc.merge] INFO Previously merged: 2026-08-01 12:11:20,905 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2026-08-01 12:11:20,905 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2026-08-01 12:11:20,905 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2026-08-01 12:11:20,905 [ scc.merge] INFO 2026-08-01 12:11:20,905 [ scc.merge] INFO Merged PRs: 2026-08-01 12:11:20,905 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-08-01 12:11:20,905 [ scc.merge] INFO 2026-08-01 12:11:20,905 [ scc.merge] INFO Repository: ome/omero-upload 2026-08-01 12:11:20,905 [ scc.merge] INFO Already up to date. 2026-08-01 12:11:20,905 [ scc.merge] INFO 2026-08-01 12:11:20,905 [ scc.merge] INFO Merged PRs: 2026-08-01 12:11:20,905 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-01 12:11:20,905 [ scc.merge] INFO 2026-08-01 12:11:20,905 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2026-08-01 12:11:20,905 [ scc.merge] INFO Updating deab817..160d894 2026-08-01 12:11:20,905 [ scc.merge] INFO Previously merged: 2026-08-01 12:11:20,905 [ scc.merge] INFO - PR 20 jburel 'Build' 2026-08-01 12:11:20,905 [ scc.merge] INFO 2026-08-01 12:11:20,905 [ scc.merge] INFO Merged PRs: 2026-08-01 12:11:20,905 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-01 12:11:20,905 [ scc.merge] INFO 2026-08-01 12:11:20,905 [ scc.merge] INFO Repository: ome/omero-web-zarr 2026-08-01 12:11:20,905 [ scc.merge] INFO Excluded PRs: 2026-08-01 12:11:20,905 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2026-08-01 12:11:20,905 [ scc.merge] INFO Updating 8f3c313..4e1e685 2026-08-01 12:11:20,905 [ scc.merge] INFO Previously merged: 2026-08-01 12:11:20,906 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2026-08-01 12:11:20,906 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2026-08-01 12:11:20,906 [ scc.merge] INFO 2026-08-01 12:11:20,906 [ scc.merge] INFO Merged PRs: 2026-08-01 12:11:20,906 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2026-08-01 12:11:20,906 [ scc.merge] INFO 2026-08-01 12:11:20,906 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-01 12:11:20,906 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-08-01 12:11:20,906 [ scc.merge] INFO 2026-08-01 12:11:20,906 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2026-08-01 12:11:20,906 [ scc.merge] INFO Already up to date. 2026-08-01 12:11:20,906 [ scc.merge] INFO 2026-08-01 12:11:20,906 [ scc.merge] INFO Merged PRs: 2026-08-01 12:11:20,906 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-01 12:11:20,906 [ scc.merge] INFO 2026-08-01 12:11:20,906 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2026-08-01 12:11:20,906 [ scc.merge] INFO Already up to date. 2026-08-01 12:11:20,906 [ scc.merge] INFO 2026-08-01 12:11:20,906 [ scc.merge] INFO Merged PRs: 2026-08-01 12:11:20,906 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-01 12:11:20,906 [ scc.merge] INFO 2026-08-01 12:11:20,906 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2026-08-01 12:11:20,906 [ scc.merge] INFO Already up to date. 2026-08-01 12:11:20,906 [ scc.merge] INFO 2026-08-01 12:11:20,906 [ scc.merge] INFO 2026-08-01 12:11:20,906 [ scc.merge] INFO Repository: ome/scripts 2026-08-01 12:11:20,906 [ scc.merge] INFO Updating 4b4c755..5b4d768 2026-08-01 12:11:20,906 [ scc.merge] INFO Previously merged: 2026-08-01 12:11:20,906 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-08-01 12:11:20,906 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-08-01 12:11:20,906 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-08-01 12:11:20,906 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-08-01 12:11:20,906 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2026-08-01 12:11:20,906 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2026-08-01 12:11:20,906 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2026-08-01 12:11:20,906 [ scc.merge] INFO 2026-08-01 12:11:20,906 [ scc.merge] INFO Merged PRs: 2026-08-01 12:11:20,906 [ scc.merge] INFO - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' 2026-08-01 12:11:20,906 [ scc.merge] INFO 2026-08-01 12:11:20,906 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-08-01 12:11:20,906 [ scc.git] DEBUG Calling 'git remote' 2026-08-01 12:11:20,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-08-01 12:11:20,920 [ scc.git] DEBUG Calling 'git remote' 2026-08-01 12:11:20,937 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:11:20,937 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-08-01 12:11:20,937 [ scc.git] DEBUG Calling 'git remote' 2026-08-01 12:11:20,954 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:11:20,954 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-08-01 12:11:20,954 [ scc.git] DEBUG Calling 'git remote' 2026-08-01 12:11:20,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:11:20,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-08-01 12:11:20,969 [ scc.git] DEBUG Calling 'git remote' 2026-08-01 12:11:20,985 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:11:20,985 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-08-01 12:11:20,985 [ scc.git] DEBUG Calling 'git remote' 2026-08-01 12:11:21,000 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:11:21,001 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-08-01 12:11:21,001 [ scc.git] DEBUG Calling 'git remote' 2026-08-01 12:11:21,017 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:11:21,017 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-08-01 12:11:21,017 [ scc.git] DEBUG Calling 'git remote' 2026-08-01 12:11:21,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:11:21,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-08-01 12:11:21,033 [ scc.git] DEBUG Calling 'git remote' 2026-08-01 12:11:21,049 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:11:21,049 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-08-01 12:11:21,049 [ scc.git] DEBUG Calling 'git remote' 2026-08-01 12:11:21,064 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:11:21,064 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-08-01 12:11:21,064 [ scc.git] DEBUG Calling 'git remote' 2026-08-01 12:11:21,080 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:11:21,080 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-08-01 12:11:21,081 [ scc.git] DEBUG Calling 'git remote' 2026-08-01 12:11:21,097 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:11:21,097 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-08-01 12:11:21,097 [ scc.git] DEBUG Calling 'git remote' 2026-08-01 12:11:21,113 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:11:21,113 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-08-01 12:11:21,114 [ scc.git] DEBUG Calling 'git remote' 2026-08-01 12:11:21,128 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:11:21,129 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-08-01 12:11:21,129 [ scc.git] DEBUG Calling 'git remote' 2026-08-01 12:11:21,143 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:11:21,143 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-08-01 12:11:21,143 [ scc.git] DEBUG Calling 'git remote' 2026-08-01 12:11:21,159 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:11:21,159 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-08-01 12:11:21,159 [ scc.git] DEBUG Calling 'git remote' 2026-08-01 12:11:21,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:11:21,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-08-01 12:11:21,176 [ scc.git] DEBUG Calling 'git remote' 2026-08-01 12:11:21,191 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:11:21,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-08-01 12:11:21,192 [ scc.git] DEBUG Calling 'git remote' 2026-08-01 12:11:21,206 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:11:21,206 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-08-01 12:11:21,206 [ scc.git] DEBUG Calling 'git remote' 2026-08-01 12:11:21,222 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:11:21,222 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-08-01 12:11:21,222 [ scc.git] DEBUG Calling 'git remote' 2026-08-01 12:11:21,237 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:11:21,237 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-08-01 12:11:21,237 [ scc.git] DEBUG Calling 'git remote' 2026-08-01 12:11:21,252 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-01 12:11:21,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-08-01 12:11:21,253 [ scc.git] DEBUG Calling 'git remote' 2026-08-01 12:11:21,268 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '8.0.1.rc2' to '8.0.1rc2' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '8.0.1.rc2' to '8.0.1rc2' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.11.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 9b99ffd] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798cee nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD da618c4] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-08-01 12:12:29,900 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-08-01 12:12:40,249 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-08-01 12:12:43,032 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-08-01 12:12:48,378 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-08-01 12:13:40,267 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS