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2024-12-03 11:26:59,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-03 11:27:00,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2024-12-03 11:27:00,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2
2024-12-03 11:27:00,762 [    scc.repo] DEBUG   - PR 114 dependabot[bot] 'Bump tar and fsevents'
2024-12-03 11:27:01,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None
2024-12-03 11:27:01,257 [    scc.repo] DEBUG   # ... Include label: dependencies
2024-12-03 11:27:01,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2024-12-03 11:27:02,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 11:27:02,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-03 11:27:03,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2024-12-03 11:27:03,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2
2024-12-03 11:27:03,834 [    scc.repo] DEBUG   - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2024-12-03 11:27:03,834 [    scc.repo] DEBUG ## Branches found:
2024-12-03 11:27:03,835 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-12-03 11:27:03,835 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:27:03,835 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:03,841 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 11:27:03,846 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 11:27:03,846 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 11:27:03,851 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 11:27:03,856 [     scc.git] DEBUG Already up to date.

2024-12-03 11:27:03,856 [     scc.git] DEBUG Calling 'git fetch origin pull/113/head'
2024-12-03 11:27:04,218 [     scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-03 11:27:04,218 [     scc.git] DEBUG  * branch            refs/pull/113/head -> FETCH_HEAD
2024-12-03 11:27:04,222 [     scc.git] DEBUG Calling 'git fetch origin pull/114/head'
2024-12-03 11:27:04,534 [     scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-03 11:27:04,534 [     scc.git] DEBUG  * branch            refs/pull/114/head -> FETCH_HEAD
2024-12-03 11:27:04,538 [     scc.git] DEBUG Calling 'git fetch origin pull/115/head'
2024-12-03 11:27:04,870 [     scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-03 11:27:04,870 [     scc.git] DEBUG  * branch            refs/pull/115/head -> FETCH_HEAD
2024-12-03 11:27:04,874 [     scc.git] DEBUG Calling 'git fetch origin pull/116/head'
2024-12-03 11:27:05,160 [     scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-03 11:27:05,161 [     scc.git] DEBUG  * branch            refs/pull/116/head -> FETCH_HEAD
2024-12-03 11:27:05,165 [     scc.git] DEBUG Calling 'git fetch origin pull/117/head'
2024-12-03 11:27:05,459 [     scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-03 11:27:05,459 [     scc.git] DEBUG  * branch            refs/pull/117/head -> FETCH_HEAD
2024-12-03 11:27:05,463 [     scc.git] DEBUG Calling 'git fetch origin pull/118/head'
2024-12-03 11:27:05,770 [     scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-03 11:27:05,771 [     scc.git] DEBUG  * branch            refs/pull/118/head -> FETCH_HEAD
2024-12-03 11:27:05,775 [     scc.git] DEBUG ## Unique users: []
2024-12-03 11:27:05,775 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:27:05,775 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:05,780 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2024-12-03 11:27:05,785 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:05,790 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2024-12-03 11:27:05,801 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 11:27:05,807 [     scc.git] DEBUG  package-lock.json | 12 ++++++------
2024-12-03 11:27:05,807 [     scc.git] DEBUG  1 file changed, 6 insertions(+), 6 deletions(-)
2024-12-03 11:27:05,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:27:05,955 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b'
2024-12-03 11:27:05,962 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:05,966 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b'
2024-12-03 11:27:06,131 [     scc.git] DEBUG Auto-merging package-lock.json
2024-12-03 11:27:06,132 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 11:27:06,137 [     scc.git] DEBUG  package-lock.json | 625 +++---------------------------------------------------
2024-12-03 11:27:06,137 [     scc.git] DEBUG  1 file changed, 29 insertions(+), 596 deletions(-)
2024-12-03 11:27:06,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:27:06,356 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2024-12-03 11:27:06,362 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:06,367 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2024-12-03 11:27:06,543 [     scc.git] DEBUG Auto-merging package-lock.json
2024-12-03 11:27:06,543 [     scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2024-12-03 11:27:06,543 [     scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-03 11:27:06,544 [     scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-03 11:27:06,550 [     scc.git] DEBUG Calling 'git reset --hard b429939e9a9e15e34038fdb15d6420163e3814cb'
2024-12-03 11:27:06,557 [     scc.git] DEBUG HEAD is now at b429939 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents)
2024-12-03 11:27:06,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:27:06,760 [     scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2024-12-03 11:27:06,767 [     scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2024-12-03 11:27:06,772 [     scc.git] INFO    - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#267](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/consoleText) for more details.
Possible conflicts:
  - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
    - package-lock.json
  - PR #114 dependabot[bot] 'Bump tar and fsevents'
    - package-lock.json

--conflicts

2024-12-03 11:27:06,776 [  scc.config] DEBUG Found github.token
2024-12-03 11:27:06,777 [     scc.git] DEBUG Not adding comment to issue #115, already --conflicts.
2024-12-03 11:27:06,777 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2024-12-03 11:27:06,782 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:06,787 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2024-12-03 11:27:06,855 [     scc.git] DEBUG Auto-merging package-lock.json
2024-12-03 11:27:06,867 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 11:27:06,872 [     scc.git] DEBUG  package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++-----
2024-12-03 11:27:06,872 [     scc.git] DEBUG  1 file changed, 108 insertions(+), 11 deletions(-)
2024-12-03 11:27:07,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:27:07,164 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c'
2024-12-03 11:27:07,183 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:07,188 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c'
2024-12-03 11:27:07,274 [     scc.git] DEBUG Auto-merging package-lock.json
2024-12-03 11:27:07,275 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 11:27:07,279 [     scc.git] DEBUG  package-lock.json | 6 +++---
2024-12-03 11:27:07,279 [     scc.git] DEBUG  1 file changed, 3 insertions(+), 3 deletions(-)
2024-12-03 11:27:07,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:27:07,564 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2024-12-03 11:27:07,571 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:07,575 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2024-12-03 11:27:07,594 [     scc.git] DEBUG Auto-merging package-lock.json
2024-12-03 11:27:07,594 [     scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2024-12-03 11:27:07,594 [     scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-03 11:27:07,595 [     scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-03 11:27:07,600 [     scc.git] DEBUG Calling 'git reset --hard e3a8d8ffce45989ba9cb05f4dae4aba516e55a93'
2024-12-03 11:27:07,607 [     scc.git] DEBUG HEAD is now at e3a8d8f merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6)
2024-12-03 11:27:07,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:27:07,957 [     scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2024-12-03 11:27:07,964 [     scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2024-12-03 11:27:07,969 [     scc.git] INFO    - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#267](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/consoleText) for more details.
Possible conflicts:
  - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
    - package-lock.json
  - PR #114 dependabot[bot] 'Bump tar and fsevents'
    - package-lock.json
  - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
    - package-lock.json
  - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
    - package-lock.json
  - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
    - package-lock.json

--conflicts

2024-12-03 11:27:07,973 [  scc.config] DEBUG Found github.token
2024-12-03 11:27:07,973 [     scc.git] DEBUG Adding comment to issue #118.
2024-12-03 11:27:08,755 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 201 2394
2024-12-03 11:27:08,756 [     scc.git] DEBUG Calling 'git submodule update'
2024-12-03 11:27:08,794 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:27:08,794 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:08,799 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 11:27:08,836 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 11:27:08,843 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ecab48f10> has no local changes
2024-12-03 11:27:08,843 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-gallery
Already up to date.

Merged PRs:
  - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
  - PR 114 dependabot[bot] 'Bump tar and fsevents'
  - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
  - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'

Conflicting PRs (not included):
  - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
  - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'

Generated by OMERO-plugins-push#267 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/)'
2024-12-03 11:27:08,851 [     scc.git] DEBUG [detached HEAD 7d0e18e] merge master -Dorg -Ssuccess-only
2024-12-03 11:27:08,851 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:27:08,851 [    scc.repo] DEBUG ## PRs found:
2024-12-03 11:27:09,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None
2024-12-03 11:27:09,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None
2024-12-03 11:27:10,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None
2024-12-03 11:27:10,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None
2024-12-03 11:27:11,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None
2024-12-03 11:27:11,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-12-03 11:27:12,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 11:27:12,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-03 11:27:13,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-12-03 11:27:13,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2
2024-12-03 11:27:13,737 [    scc.repo] DEBUG   - PR 471 will-moore 'Z projection disabled tooltip'
2024-12-03 11:27:14,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None
2024-12-03 11:27:14,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None
2024-12-03 11:27:15,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-12-03 11:27:15,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 11:27:16,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-03 11:27:16,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-12-03 11:27:17,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2
2024-12-03 11:27:17,177 [    scc.repo] DEBUG   - PR 465 will-moore 'Save as Figure'
2024-12-03 11:27:17,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None
2024-12-03 11:27:18,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None
2024-12-03 11:27:18,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-12-03 11:27:19,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 11:27:19,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-12-03 11:27:20,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2
2024-12-03 11:27:20,205 [    scc.repo] DEBUG   - PR 460 will-moore 'Channel min spinner fix'
2024-12-03 11:27:20,206 [    scc.repo] DEBUG ## Branches found:
2024-12-03 11:27:20,206 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-12-03 11:27:20,206 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:27:20,206 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:20,212 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 11:27:20,216 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 11:27:20,216 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 11:27:20,222 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 11:27:20,227 [     scc.git] DEBUG Already up to date.

2024-12-03 11:27:20,227 [     scc.git] DEBUG Calling 'git fetch origin pull/460/head'
2024-12-03 11:27:20,616 [     scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-12-03 11:27:20,617 [     scc.git] DEBUG  * branch            refs/pull/460/head -> FETCH_HEAD
2024-12-03 11:27:20,622 [     scc.git] DEBUG Calling 'git fetch origin pull/465/head'
2024-12-03 11:27:21,726 [     scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-12-03 11:27:21,726 [     scc.git] DEBUG  * branch            refs/pull/465/head -> FETCH_HEAD
2024-12-03 11:27:21,731 [     scc.git] DEBUG Calling 'git fetch origin pull/471/head'
2024-12-03 11:27:22,048 [     scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-12-03 11:27:22,048 [     scc.git] DEBUG  * branch            refs/pull/471/head -> FETCH_HEAD
2024-12-03 11:27:22,053 [     scc.git] DEBUG ## Unique users: []
2024-12-03 11:27:22,053 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:27:22,053 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:22,059 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-12-03 11:27:22,066 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:22,071 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-12-03 11:27:22,100 [     scc.git] DEBUG Auto-merging src/model/image_info.js
2024-12-03 11:27:22,155 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 11:27:22,159 [     scc.git] DEBUG  src/model/image_info.js       | 7 ++++---
2024-12-03 11:27:22,159 [     scc.git] DEBUG  src/settings/channel-range.js | 4 +++-
2024-12-03 11:27:22,159 [     scc.git] DEBUG  2 files changed, 7 insertions(+), 4 deletions(-)
2024-12-03 11:27:22,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:27:22,311 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd'
2024-12-03 11:27:22,320 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:22,324 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd'
2024-12-03 11:27:22,486 [     scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py
2024-12-03 11:27:22,487 [     scc.git] DEBUG Auto-merging src/app/context.js
2024-12-03 11:27:22,487 [     scc.git] DEBUG Auto-merging src/utils/constants.js
2024-12-03 11:27:22,487 [     scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js
2024-12-03 11:27:22,487 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 11:27:22,492 [     scc.git] DEBUG  plugin/omero_iviewer/views.py |  17 +++-
2024-12-03 11:27:22,492 [     scc.git] DEBUG  src/app/context.js            |   6 +-
2024-12-03 11:27:22,492 [     scc.git] DEBUG  src/app/header.html           |   5 +
2024-12-03 11:27:22,492 [     scc.git] DEBUG  src/app/header.js             |  45 ++++++++-
2024-12-03 11:27:22,492 [     scc.git] DEBUG  src/utils/constants.js        |   6 ++
2024-12-03 11:27:22,492 [     scc.git] DEBUG  src/utils/figure.js           | 217 ++++++++++++++++++++++++++++++++++++++++++
2024-12-03 11:27:22,492 [     scc.git] DEBUG  6 files changed, 290 insertions(+), 6 deletions(-)
2024-12-03 11:27:22,492 [     scc.git] DEBUG  create mode 100644 src/utils/figure.js
2024-12-03 11:27:22,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:27:22,816 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9'
2024-12-03 11:27:22,825 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:22,830 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9'
2024-12-03 11:27:22,905 [     scc.git] DEBUG Auto-merging src/controls/dimension-slider.js
2024-12-03 11:27:22,912 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 11:27:22,915 [     scc.git] DEBUG  src/controls/dimension-slider.html |  2 +-
2024-12-03 11:27:22,916 [     scc.git] DEBUG  src/controls/dimension-slider.js   | 20 ++++++++++++++++++++
2024-12-03 11:27:22,916 [     scc.git] DEBUG  2 files changed, 21 insertions(+), 1 deletion(-)
2024-12-03 11:27:23,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:27:23,214 [     scc.git] DEBUG Calling 'git submodule update'
2024-12-03 11:27:23,253 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:27:23,253 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:23,258 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 11:27:23,297 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 11:27:23,305 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ec82975e0> has no local changes
2024-12-03 11:27:23,305 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-iviewer
Excluded PRs:
  - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
  - PR 420 will-moore 'Add release process to README' (exclude comment)
  - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Already up to date.

Merged PRs:
  - PR 460 will-moore 'Channel min spinner fix'
  - PR 465 will-moore 'Save as Figure'
  - PR 471 will-moore 'Z projection disabled tooltip'

Generated by OMERO-plugins-push#267 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/)'
2024-12-03 11:27:23,412 [     scc.git] DEBUG [detached HEAD 8d0e2de] merge master -Dorg -Ssuccess-only
2024-12-03 11:27:23,413 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:27:23,413 [    scc.repo] DEBUG ## PRs found:
2024-12-03 11:27:23,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2024-12-03 11:27:24,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2024-12-03 11:27:24,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2024-12-03 11:27:25,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-12-03 11:27:25,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 11:27:26,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-12-03 11:27:26,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2024-12-03 11:27:26,567 [    scc.repo] DEBUG   - PR 74 will-moore 'mapr extension of webclient'
2024-12-03 11:27:26,567 [    scc.repo] DEBUG ## Branches found:
2024-12-03 11:27:26,567 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-12-03 11:27:26,567 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:27:26,567 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:26,573 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 11:27:26,578 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 11:27:26,578 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 11:27:26,583 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 11:27:26,589 [     scc.git] DEBUG Already up to date.

2024-12-03 11:27:26,589 [     scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2024-12-03 11:27:27,322 [     scc.git] DEBUG From https://github.com/ome/omero-mapr
2024-12-03 11:27:27,322 [     scc.git] DEBUG  * branch            refs/pull/74/head -> FETCH_HEAD
2024-12-03 11:27:27,326 [     scc.git] DEBUG ## Unique users: []
2024-12-03 11:27:27,326 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:27:27,326 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:27,332 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-12-03 11:27:27,338 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:27,342 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-12-03 11:27:27,352 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 11:27:27,355 [     scc.git] DEBUG  .../templates/webclient/base/base_container.html   | 182 +++++++++++++
2024-12-03 11:27:27,355 [     scc.git] DEBUG  .../data/includes/right_plugin.general.js.html     | 290 ---------------------
2024-12-03 11:27:27,355 [     scc.git] DEBUG  requirements.txt                                   |   2 +-
2024-12-03 11:27:27,355 [     scc.git] DEBUG  3 files changed, 183 insertions(+), 291 deletions(-)
2024-12-03 11:27:27,355 [     scc.git] DEBUG  create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2024-12-03 11:27:27,356 [     scc.git] DEBUG  delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2024-12-03 11:27:27,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:27:27,515 [     scc.git] DEBUG Calling 'git submodule update'
2024-12-03 11:27:27,552 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:27:27,553 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:27,557 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 11:27:27,593 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 11:27:27,599 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ec82a9b50> has no local changes
2024-12-03 11:27:27,600 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-mapr
Excluded PRs:
  - PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.

Merged PRs:
  - PR 74 will-moore 'mapr extension of webclient'

Generated by OMERO-plugins-push#267 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/)'
2024-12-03 11:27:27,607 [     scc.git] DEBUG [detached HEAD 295475c] merge master -Dorg -Ssuccess-only
2024-12-03 11:27:27,608 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:27:27,608 [    scc.repo] DEBUG ## PRs found:
2024-12-03 11:27:28,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2024-12-03 11:27:28,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/89 HTTP/1.1" 200 None
2024-12-03 11:27:29,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175 HTTP/1.1" 200 None
2024-12-03 11:27:29,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 11:27:30,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-03 11:27:30,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175 HTTP/1.1" 200 None
2024-12-03 11:27:31,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/dfc227486da13c78bc278fc534e59b40cbc97175?per_page=1 HTTP/1.1" 200 2
2024-12-03 11:27:31,078 [    scc.repo] DEBUG   - PR 89 jburel 'Build'
2024-12-03 11:27:31,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2024-12-03 11:27:32,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2024-12-03 11:27:32,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-12-03 11:27:33,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 11:27:33,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-12-03 11:27:34,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2024-12-03 11:27:34,003 [    scc.repo] DEBUG   - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-12-03 11:27:34,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2024-12-03 11:27:34,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2024-12-03 11:27:35,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-12-03 11:27:35,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 11:27:36,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-12-03 11:27:36,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2024-12-03 11:27:36,826 [    scc.repo] DEBUG   - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-12-03 11:27:36,826 [    scc.repo] DEBUG ## Branches found:
2024-12-03 11:27:36,826 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-12-03 11:27:36,826 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:27:36,826 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:36,832 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 11:27:36,838 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 11:27:36,839 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 11:27:36,845 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 11:27:36,851 [     scc.git] DEBUG Already up to date.

2024-12-03 11:27:36,851 [     scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2024-12-03 11:27:37,207 [     scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-12-03 11:27:37,207 [     scc.git] DEBUG  * branch            refs/pull/55/head -> FETCH_HEAD
2024-12-03 11:27:37,212 [     scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2024-12-03 11:27:37,521 [     scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-12-03 11:27:37,521 [     scc.git] DEBUG  * branch            refs/pull/64/head -> FETCH_HEAD
2024-12-03 11:27:37,526 [     scc.git] DEBUG Calling 'git fetch origin pull/89/head'
2024-12-03 11:27:37,854 [     scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-12-03 11:27:37,855 [     scc.git] DEBUG  * branch            refs/pull/89/head -> FETCH_HEAD
2024-12-03 11:27:37,860 [     scc.git] DEBUG ## Unique users: []
2024-12-03 11:27:37,860 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:27:37,860 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:37,865 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-12-03 11:27:37,872 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:37,876 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-12-03 11:27:37,910 [     scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2024-12-03 11:27:37,910 [     scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2024-12-03 11:27:37,910 [     scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-12-03 11:27:37,910 [     scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-12-03 11:27:37,910 [     scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-03 11:27:37,911 [     scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-03 11:27:37,916 [     scc.git] DEBUG Calling 'git reset --hard fc2095901f5dfd24ecd29a99092283f136de04d5'
2024-12-03 11:27:37,922 [     scc.git] DEBUG HEAD is now at fc20959 Bump version: 0.13.0 → 0.13.1.dev0
2024-12-03 11:27:38,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:27:38,084 [     scc.git] DEBUG Calling 'git merge-base fc2095901f5dfd24ecd29a99092283f136de04d5 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-12-03 11:27:38,091 [     scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..fc2095901f5dfd24ecd29a99092283f136de04d5'
2024-12-03 11:27:38,146 [     scc.git] INFO    - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#267](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/consoleText) for more details.
Possible conflicts:
  - Upstream changes
    - src/omero_metadata/cli.py
    - src/omero_metadata/populate.py

--conflicts

2024-12-03 11:27:38,151 [  scc.config] DEBUG Found github.token
2024-12-03 11:27:38,152 [     scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2024-12-03 11:27:38,152 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2024-12-03 11:27:38,158 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:38,163 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2024-12-03 11:27:38,436 [     scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-12-03 11:27:38,437 [     scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-12-03 11:27:38,437 [     scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2024-12-03 11:27:38,437 [     scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-03 11:27:38,437 [     scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-03 11:27:38,443 [     scc.git] DEBUG Calling 'git reset --hard fc2095901f5dfd24ecd29a99092283f136de04d5'
2024-12-03 11:27:38,450 [     scc.git] DEBUG HEAD is now at fc20959 Bump version: 0.13.0 → 0.13.1.dev0
2024-12-03 11:27:38,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:27:38,637 [     scc.git] DEBUG Calling 'git merge-base fc2095901f5dfd24ecd29a99092283f136de04d5 78e55539b68e351ed5ef202854718b49a37729a7'
2024-12-03 11:27:38,645 [     scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..fc2095901f5dfd24ecd29a99092283f136de04d5'
2024-12-03 11:27:38,652 [     scc.git] INFO    - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#267](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/consoleText) for more details.
Possible conflicts:
  - PR #55 kkoz 'Prevent users from creating columns with python keyword names'
    - src/omero_metadata/populate.py
  - Upstream changes
    - src/omero_metadata/populate.py

--conflicts

2024-12-03 11:27:38,657 [  scc.config] DEBUG Found github.token
2024-12-03 11:27:38,657 [     scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2024-12-03 11:27:38,657 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...dfc227486da13c78bc278fc534e59b40cbc97175'
2024-12-03 11:27:38,663 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:38,668 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 89 (Build) dfc227486da13c78bc278fc534e59b40cbc97175'
2024-12-03 11:27:38,680 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 11:27:38,683 [     scc.git] DEBUG  .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-12-03 11:27:38,683 [     scc.git] DEBUG  1 file changed, 7 insertions(+), 5 deletions(-)
2024-12-03 11:27:39,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:27:39,034 [     scc.git] DEBUG Calling 'git submodule update'
2024-12-03 11:27:39,075 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:27:39,075 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:39,081 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 11:27:39,121 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 11:27:39,127 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ec82507c0> has no local changes
2024-12-03 11:27:39,128 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-metadata
Already up to date.

Merged PRs:
  - PR 89 jburel 'Build'

Conflicting PRs (not included):
  - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
  - PR 64 will-moore 'Support images_by_name for Screen and Plate'

Generated by OMERO-plugins-push#267 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/)'
2024-12-03 11:27:39,135 [     scc.git] DEBUG [detached HEAD 999606b] merge master -Dorg -Ssuccess-only
2024-12-03 11:27:39,136 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:27:39,136 [    scc.repo] DEBUG ## PRs found:
2024-12-03 11:27:39,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2024-12-03 11:27:40,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2024-12-03 11:27:40,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2024-12-03 11:27:41,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2024-12-03 11:27:41,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2024-12-03 11:27:42,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2024-12-03 11:27:42,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2024-12-03 11:27:42,519 [    scc.repo] DEBUG ## Branches found:
2024-12-03 11:27:42,519 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-12-03 11:27:42,519 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:27:42,519 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:42,525 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 11:27:42,529 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 11:27:42,530 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 11:27:42,535 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 11:27:42,547 [     scc.git] DEBUG Updating 5d441c2..fb5ae86

2024-12-03 11:27:43,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/133 HTTP/1.1" 200 None
2024-12-03 11:27:43,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/129 HTTP/1.1" 200 None
2024-12-03 11:27:44,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/131 HTTP/1.1" 200 None
2024-12-03 11:27:45,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/128 HTTP/1.1" 200 None
2024-12-03 11:27:45,192 [     scc.git] DEBUG ## Unique users: []
2024-12-03 11:27:45,192 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:27:45,192 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:45,198 [     scc.git] DEBUG Calling 'git submodule update'
2024-12-03 11:27:45,235 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:27:45,235 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:45,240 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 11:27:45,278 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 11:27:45,285 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ec8250640> has no local changes
2024-12-03 11:27:45,285 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-parade
Excluded PRs:
  - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
  - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
  - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Updating 5d441c2..fb5ae86
Previously merged:
  - PR 133 jburel 'Build'
  - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
  - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
  - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'


Generated by OMERO-plugins-push#267 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/)'
2024-12-03 11:27:45,308 [     scc.git] DEBUG [detached HEAD 1e26f16] merge master -Dorg -Ssuccess-only
2024-12-03 11:27:45,308 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:27:45,309 [    scc.repo] DEBUG ## PRs found:
2024-12-03 11:27:45,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None
2024-12-03 11:27:46,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/15 HTTP/1.1" 200 None
2024-12-03 11:27:46,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332 HTTP/1.1" 200 None
2024-12-03 11:27:47,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 11:27:47,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-03 11:27:48,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None
2024-12-03 11:27:48,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-12-03 11:27:49,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 11:27:49,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-12-03 11:27:50,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2
2024-12-03 11:27:50,263 [    scc.repo] DEBUG   - PR 14 jburel 'use conda-forge channel'
2024-12-03 11:27:50,264 [    scc.repo] DEBUG ## Branches found:
2024-12-03 11:27:50,264 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-12-03 11:27:50,264 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:27:50,264 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:50,272 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 11:27:50,277 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 11:27:50,277 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 11:27:50,282 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 11:27:50,287 [     scc.git] DEBUG Already up to date.

2024-12-03 11:27:50,287 [     scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-12-03 11:27:50,619 [     scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools
2024-12-03 11:27:50,619 [     scc.git] DEBUG  * branch            refs/pull/14/head -> FETCH_HEAD
2024-12-03 11:27:50,624 [     scc.git] DEBUG ## Unique users: []
2024-12-03 11:27:50,625 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:27:50,625 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:50,630 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-12-03 11:27:50,636 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:50,641 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-12-03 11:27:50,650 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 11:27:50,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:27:50,795 [     scc.git] DEBUG Calling 'git submodule update'
2024-12-03 11:27:50,837 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:27:50,837 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:50,843 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 11:27:50,885 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 11:27:50,891 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ec82c48b0> has no local changes
2024-12-03 11:27:50,891 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-prometheus-tools
Excluded PRs:
  - PR 15 jburel 'Build' (status: failure)
Already up to date.

Merged PRs:
  - PR 14 jburel 'use conda-forge channel'

Generated by OMERO-plugins-push#267 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/)'
2024-12-03 11:27:50,899 [     scc.git] DEBUG [detached HEAD 7f4d328] merge master -Dorg -Ssuccess-only
2024-12-03 11:27:50,899 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:27:50,900 [    scc.repo] DEBUG ## PRs found:
2024-12-03 11:27:51,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2024-12-03 11:27:51,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/29 HTTP/1.1" 200 None
2024-12-03 11:27:52,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None
2024-12-03 11:27:52,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 11:27:53,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None
2024-12-03 11:27:53,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24?per_page=1 HTTP/1.1" 200 None
2024-12-03 11:27:54,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None
2024-12-03 11:27:54,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/status HTTP/1.1" 200 None
2024-12-03 11:27:54,962 [    scc.repo] DEBUG   - PR 29 jburel 'Build'
2024-12-03 11:27:55,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None
2024-12-03 11:27:55,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None
2024-12-03 11:27:56,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None
2024-12-03 11:27:56,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-12-03 11:27:57,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 11:27:57,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-12-03 11:27:58,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2
2024-12-03 11:27:58,315 [    scc.repo] DEBUG   - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-12-03 11:27:58,315 [    scc.repo] DEBUG ## Branches found:
2024-12-03 11:27:58,315 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-12-03 11:27:58,315 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:27:58,315 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:58,321 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 11:27:58,326 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 11:27:58,326 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 11:27:58,331 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 11:27:58,336 [     scc.git] DEBUG Already up to date.

2024-12-03 11:27:58,336 [     scc.git] DEBUG Calling 'git fetch origin pull/6/head'
2024-12-03 11:27:59,029 [     scc.git] DEBUG From https://github.com/ome/omero-rois
2024-12-03 11:27:59,029 [     scc.git] DEBUG  * branch            refs/pull/6/head -> FETCH_HEAD
2024-12-03 11:27:59,034 [     scc.git] DEBUG Calling 'git fetch origin pull/29/head'
2024-12-03 11:27:59,699 [     scc.git] DEBUG From https://github.com/ome/omero-rois
2024-12-03 11:27:59,699 [     scc.git] DEBUG  * branch            refs/pull/29/head -> FETCH_HEAD
2024-12-03 11:27:59,704 [     scc.git] DEBUG ## Unique users: []
2024-12-03 11:27:59,704 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:27:59,704 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:59,710 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61'
2024-12-03 11:27:59,716 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:59,721 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61'
2024-12-03 11:27:59,733 [     scc.git] DEBUG Auto-merging src/omero_rois/library.py
2024-12-03 11:27:59,734 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 11:27:59,736 [     scc.git] DEBUG  src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++
2024-12-03 11:27:59,736 [     scc.git] DEBUG  1 file changed, 33 insertions(+)
2024-12-03 11:27:59,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:27:59,882 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24'
2024-12-03 11:27:59,890 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:27:59,895 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Build) 92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24'
2024-12-03 11:27:59,905 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 11:27:59,908 [     scc.git] DEBUG  .github/workflows/omero_plugin.yml |  2 +-
2024-12-03 11:27:59,908 [     scc.git] DEBUG  .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-12-03 11:27:59,908 [     scc.git] DEBUG  2 files changed, 8 insertions(+), 6 deletions(-)
2024-12-03 11:28:00,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:00,268 [     scc.git] DEBUG Calling 'git submodule update'
2024-12-03 11:28:00,308 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:00,309 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:00,315 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 11:28:00,353 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 11:28:00,360 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ec82801c0> has no local changes
2024-12-03 11:28:00,360 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-rois
Excluded PRs:
  - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.

Merged PRs:
  - PR 6 dominikl 'Add method to create masks grouped by label id'
  - PR 29 jburel 'Build'

Generated by OMERO-plugins-push#267 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/)'
2024-12-03 11:28:00,368 [     scc.git] DEBUG [detached HEAD 8ef8aef] merge master -Dorg -Ssuccess-only
2024-12-03 11:28:00,369 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:00,369 [    scc.repo] DEBUG ## PRs found:
2024-12-03 11:28:00,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2024-12-03 11:28:01,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/21 HTTP/1.1" 200 None
2024-12-03 11:28:01,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1 HTTP/1.1" 200 None
2024-12-03 11:28:02,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 11:28:03,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-03 11:28:03,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1 HTTP/1.1" 200 None
2024-12-03 11:28:03,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1?per_page=1 HTTP/1.1" 200 2
2024-12-03 11:28:03,916 [    scc.repo] DEBUG   - PR 21 jburel 'Build'
2024-12-03 11:28:04,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2024-12-03 11:28:04,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2024-12-03 11:28:05,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-12-03 11:28:05,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 11:28:06,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-12-03 11:28:06,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2024-12-03 11:28:06,850 [    scc.repo] DEBUG   - PR 14 manics 'Add pre-commit (black, flake8)'
2024-12-03 11:28:06,850 [    scc.repo] DEBUG ## Branches found:
2024-12-03 11:28:06,850 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-12-03 11:28:06,851 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:06,851 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:06,857 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 11:28:06,863 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 11:28:06,863 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 11:28:06,869 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 11:28:06,875 [     scc.git] DEBUG Already up to date.

2024-12-03 11:28:06,876 [     scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-12-03 11:28:07,267 [     scc.git] DEBUG From https://github.com/ome/omero-signup
2024-12-03 11:28:07,268 [     scc.git] DEBUG  * branch            refs/pull/14/head -> FETCH_HEAD
2024-12-03 11:28:07,272 [     scc.git] DEBUG Calling 'git fetch origin pull/21/head'
2024-12-03 11:28:07,738 [     scc.git] DEBUG From https://github.com/ome/omero-signup
2024-12-03 11:28:07,738 [     scc.git] DEBUG  * branch            refs/pull/21/head -> FETCH_HEAD
2024-12-03 11:28:07,743 [     scc.git] DEBUG ## Unique users: []
2024-12-03 11:28:07,743 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:07,743 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:07,748 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-12-03 11:28:07,754 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:07,759 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-12-03 11:28:07,801 [     scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2024-12-03 11:28:07,801 [     scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2024-12-03 11:28:07,801 [     scc.git] DEBUG Auto-merging omero_signup/urls.py
2024-12-03 11:28:07,801 [     scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2024-12-03 11:28:07,801 [     scc.git] DEBUG Auto-merging omero_signup/views.py
2024-12-03 11:28:07,802 [     scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2024-12-03 11:28:07,802 [     scc.git] DEBUG Auto-merging setup.py
2024-12-03 11:28:07,802 [     scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2024-12-03 11:28:07,802 [     scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-03 11:28:07,802 [     scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-03 11:28:07,807 [     scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319'
2024-12-03 11:28:07,813 [     scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0
2024-12-03 11:28:07,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:08,000 [     scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-12-03 11:28:08,007 [     scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319'
2024-12-03 11:28:08,012 [     scc.git] INFO    - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#267](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/consoleText) for more details.
Possible conflicts:
  - Upstream changes
    - omero_signup/views.py
    - omero_signup/signup_settings.py
    - omero_signup/urls.py
    - setup.py

--conflicts

2024-12-03 11:28:08,016 [  scc.config] DEBUG Found github.token
2024-12-03 11:28:08,016 [     scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2024-12-03 11:28:08,016 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d8cd79097b8e36aef506d1589aa1bc281a0fc1b1'
2024-12-03 11:28:08,021 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:08,026 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Build) d8cd79097b8e36aef506d1589aa1bc281a0fc1b1'
2024-12-03 11:28:08,060 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 11:28:08,063 [     scc.git] DEBUG  .github/workflows/omero_plugin.yml |  2 +-
2024-12-03 11:28:08,063 [     scc.git] DEBUG  .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-12-03 11:28:08,063 [     scc.git] DEBUG  .omeroci/app-build                 | 19 +++++++++++++++++++
2024-12-03 11:28:08,063 [     scc.git] DEBUG  3 files changed, 27 insertions(+), 6 deletions(-)
2024-12-03 11:28:08,063 [     scc.git] DEBUG  create mode 100755 .omeroci/app-build
2024-12-03 11:28:08,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:08,393 [     scc.git] DEBUG Calling 'git submodule update'
2024-12-03 11:28:08,432 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:08,432 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:08,437 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 11:28:08,475 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 11:28:08,481 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ec8280a90> has no local changes
2024-12-03 11:28:08,481 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-signup
Already up to date.

Merged PRs:
  - PR 21 jburel 'Build'

Conflicting PRs (not included):
  - PR 14 manics 'Add pre-commit (black, flake8)'

Generated by OMERO-plugins-push#267 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/)'
2024-12-03 11:28:08,489 [     scc.git] DEBUG [detached HEAD 76042db] merge master -Dorg -Ssuccess-only
2024-12-03 11:28:08,489 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:08,489 [    scc.repo] DEBUG ## PRs found:
2024-12-03 11:28:08,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2024-12-03 11:28:09,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2024-12-03 11:28:09,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2024-12-03 11:28:10,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-12-03 11:28:10,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 11:28:11,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-12-03 11:28:11,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2024-12-03 11:28:11,786 [    scc.repo] DEBUG   - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-12-03 11:28:11,786 [    scc.repo] DEBUG ## Branches found:
2024-12-03 11:28:11,786 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-12-03 11:28:11,786 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:11,786 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:11,792 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 11:28:11,797 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 11:28:11,797 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 11:28:11,802 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 11:28:11,807 [     scc.git] DEBUG Already up to date.

2024-12-03 11:28:11,807 [     scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2024-12-03 11:28:12,236 [     scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2024-12-03 11:28:12,236 [     scc.git] DEBUG  * branch            refs/pull/12/head -> FETCH_HEAD
2024-12-03 11:28:12,241 [     scc.git] DEBUG ## Unique users: []
2024-12-03 11:28:12,241 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:12,241 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:12,246 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2024-12-03 11:28:12,253 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:12,257 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2024-12-03 11:28:12,300 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 11:28:12,303 [     scc.git] DEBUG  idr-compose.yml                            |  66 ++++++++++++++
2024-12-03 11:28:12,303 [     scc.git] DEBUG  idr-haproxy.yml                            |  58 +++++++++++++
2024-12-03 11:28:12,303 [     scc.git] DEBUG  idr/40-ansible.sh                          |   7 ++
2024-12-03 11:28:12,303 [     scc.git] DEBUG  idr/70-reset-password.sh                   |   1 +
2024-12-03 11:28:12,303 [     scc.git] DEBUG  idr/nginx/conf.d/default.conf              |   1 +
2024-12-03 11:28:12,303 [     scc.git] DEBUG  idr/nginx/conf.d/example_ssl.conf          |   1 +
2024-12-03 11:28:12,303 [     scc.git] DEBUG  idr/nginx/conf.d/proxy-cache.conf          |  53 +++++++++++
2024-12-03 11:28:12,304 [     scc.git] DEBUG  idr/nginx/conf.d/proxy-cachebuster.conf    | 114 ++++++++++++++++++++++++
2024-12-03 11:28:12,304 [     scc.git] DEBUG  idr/nginx/conf.d/proxy-default.conf        | 135 +++++++++++++++++++++++++++++
2024-12-03 11:28:12,304 [     scc.git] DEBUG  idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2024-12-03 11:28:12,304 [     scc.git] DEBUG  idr/nginx/conf.d/proxy-redirect.conf       |  15 ++++
2024-12-03 11:28:12,304 [     scc.git] DEBUG  idr/nginx/conf.d/proxy-upstream.conf       |  13 +++
2024-12-03 11:28:12,306 [     scc.git] DEBUG  idr/nginx/conf.d/proxy-v0.conf             |  26 ++++++
2024-12-03 11:28:12,306 [     scc.git] DEBUG  idr/nginx/conf.d/proxy-v1.conf             |  30 +++++++
2024-12-03 11:28:12,306 [     scc.git] DEBUG  idr/nginx/conf.d/proxy-v2.conf             |  30 +++++++
2024-12-03 11:28:12,306 [     scc.git] DEBUG  idr/nginx/conf.d/proxy-websockets.conf     |   6 ++
2024-12-03 11:28:12,306 [     scc.git] DEBUG  idr/nginx/nginx.conf                       |  53 +++++++++++
2024-12-03 11:28:12,306 [     scc.git] DEBUG  idr/omero/Dockerfile                       |   3 +
2024-12-03 11:28:12,306 [     scc.git] DEBUG  idr/omero/playbook.yml                     |  41 +++++++++
2024-12-03 11:28:12,306 [     scc.git] DEBUG  idr/redirect/Dockerfile                    |   6 ++
2024-12-03 11:28:12,306 [     scc.git] DEBUG  idr/web/Dockerfile                         |   5 ++
2024-12-03 11:28:12,306 [     scc.git] DEBUG  idr/web/playbook.yml                       |  45 ++++++++++
2024-12-03 11:28:12,306 [     scc.git] DEBUG  22 files changed, 824 insertions(+)
2024-12-03 11:28:12,306 [     scc.git] DEBUG  create mode 100644 idr-compose.yml
2024-12-03 11:28:12,306 [     scc.git] DEBUG  create mode 100644 idr-haproxy.yml
2024-12-03 11:28:12,306 [     scc.git] DEBUG  create mode 100755 idr/40-ansible.sh
2024-12-03 11:28:12,306 [     scc.git] DEBUG  create mode 100755 idr/70-reset-password.sh
2024-12-03 11:28:12,306 [     scc.git] DEBUG  create mode 100644 idr/nginx/conf.d/default.conf
2024-12-03 11:28:12,306 [     scc.git] DEBUG  create mode 100644 idr/nginx/conf.d/example_ssl.conf
2024-12-03 11:28:12,306 [     scc.git] DEBUG  create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2024-12-03 11:28:12,306 [     scc.git] DEBUG  create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2024-12-03 11:28:12,306 [     scc.git] DEBUG  create mode 100644 idr/nginx/conf.d/proxy-default.conf
2024-12-03 11:28:12,306 [     scc.git] DEBUG  create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2024-12-03 11:28:12,306 [     scc.git] DEBUG  create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2024-12-03 11:28:12,306 [     scc.git] DEBUG  create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2024-12-03 11:28:12,306 [     scc.git] DEBUG  create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2024-12-03 11:28:12,306 [     scc.git] DEBUG  create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2024-12-03 11:28:12,306 [     scc.git] DEBUG  create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2024-12-03 11:28:12,307 [     scc.git] DEBUG  create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2024-12-03 11:28:12,307 [     scc.git] DEBUG  create mode 100644 idr/nginx/nginx.conf
2024-12-03 11:28:12,307 [     scc.git] DEBUG  create mode 100644 idr/omero/Dockerfile
2024-12-03 11:28:12,307 [     scc.git] DEBUG  create mode 100644 idr/omero/playbook.yml
2024-12-03 11:28:12,307 [     scc.git] DEBUG  create mode 100644 idr/redirect/Dockerfile
2024-12-03 11:28:12,307 [     scc.git] DEBUG  create mode 100644 idr/web/Dockerfile
2024-12-03 11:28:12,307 [     scc.git] DEBUG  create mode 100644 idr/web/playbook.yml
2024-12-03 11:28:12,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:12,446 [     scc.git] DEBUG Calling 'git submodule update'
2024-12-03 11:28:12,484 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:12,484 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:12,489 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 11:28:12,526 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 11:28:12,532 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ec827fc70> has no local changes
2024-12-03 11:28:12,532 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: openmicroscopy/omero-test-infra
Already up to date.

Merged PRs:
  - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'

Generated by OMERO-plugins-push#267 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/)'
2024-12-03 11:28:12,542 [     scc.git] DEBUG [detached HEAD 736d1a5] merge master -Dorg -Ssuccess-only
2024-12-03 11:28:12,543 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:12,543 [    scc.repo] DEBUG ## PRs found:
2024-12-03 11:28:12,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2
2024-12-03 11:28:12,857 [    scc.repo] DEBUG ## Branches found:
2024-12-03 11:28:12,857 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-12-03 11:28:12,857 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:12,857 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:12,863 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 11:28:12,867 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 11:28:12,867 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 11:28:12,873 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 11:28:12,881 [     scc.git] DEBUG Updating aca9e9c..100f6ae

2024-12-03 11:28:13,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls/13 HTTP/1.1" 200 None
2024-12-03 11:28:13,704 [     scc.git] DEBUG ## Unique users: []
2024-12-03 11:28:13,704 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:13,705 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:13,710 [     scc.git] DEBUG Calling 'git submodule update'
2024-12-03 11:28:13,748 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:13,748 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:13,753 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 11:28:13,790 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 11:28:13,796 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ec82a86a0> has no local changes
2024-12-03 11:28:13,796 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-upload
Updating aca9e9c..100f6ae
Previously merged:
  - PR 13 jburel 'Build'


Generated by OMERO-plugins-push#267 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/)'
2024-12-03 11:28:13,804 [     scc.git] DEBUG [detached HEAD 963e76e] merge master -Dorg -Ssuccess-only
2024-12-03 11:28:13,804 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:13,804 [    scc.repo] DEBUG ## PRs found:
2024-12-03 11:28:14,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None
2024-12-03 11:28:14,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20 HTTP/1.1" 200 None
2024-12-03 11:28:15,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None
2024-12-03 11:28:15,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 11:28:16,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-03 11:28:16,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None
2024-12-03 11:28:17,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/14c890a5b62ef9937c751230251154351debb9ea?per_page=1 HTTP/1.1" 200 2
2024-12-03 11:28:17,352 [    scc.repo] DEBUG   - PR 20 jburel 'Build'
2024-12-03 11:28:17,352 [    scc.repo] DEBUG ## Branches found:
2024-12-03 11:28:17,352 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-12-03 11:28:17,353 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:17,353 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:17,358 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 11:28:17,363 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 11:28:17,363 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 11:28:17,368 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 11:28:17,373 [     scc.git] DEBUG Already up to date.

2024-12-03 11:28:17,373 [     scc.git] DEBUG Calling 'git fetch origin pull/20/head'
2024-12-03 11:28:18,007 [     scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope
2024-12-03 11:28:18,007 [     scc.git] DEBUG  * branch            refs/pull/20/head -> FETCH_HEAD
2024-12-03 11:28:18,012 [     scc.git] DEBUG ## Unique users: []
2024-12-03 11:28:18,012 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:18,012 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:18,018 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...14c890a5b62ef9937c751230251154351debb9ea'
2024-12-03 11:28:18,023 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:18,028 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 20 (Build) 14c890a5b62ef9937c751230251154351debb9ea'
2024-12-03 11:28:18,126 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 11:28:18,129 [     scc.git] DEBUG  .github/workflows/omero_plugin.yml |  2 +-
2024-12-03 11:28:18,129 [     scc.git] DEBUG  .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-12-03 11:28:18,129 [     scc.git] DEBUG  .omeroci/app-build                 | 19 +++++++++++++++++++
2024-12-03 11:28:18,129 [     scc.git] DEBUG  3 files changed, 27 insertions(+), 6 deletions(-)
2024-12-03 11:28:18,129 [     scc.git] DEBUG  create mode 100755 .omeroci/app-build
2024-12-03 11:28:18,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:18,267 [     scc.git] DEBUG Calling 'git submodule update'
2024-12-03 11:28:18,305 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:18,305 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:18,310 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 11:28:18,347 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 11:28:18,354 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ec826df70> has no local changes
2024-12-03 11:28:18,354 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-virtual-microscope
Already up to date.

Merged PRs:
  - PR 20 jburel 'Build'

Generated by OMERO-plugins-push#267 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/)'
2024-12-03 11:28:18,362 [     scc.git] DEBUG [detached HEAD 340b1fa] merge master -Dorg -Ssuccess-only
2024-12-03 11:28:18,363 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:18,363 [     scc.git] INFO  Overriding base-branch from master to main
2024-12-03 11:28:18,363 [    scc.repo] DEBUG ## PRs found:
2024-12-03 11:28:18,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2024-12-03 11:28:19,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None
2024-12-03 11:28:19,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None
2024-12-03 11:28:20,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None
2024-12-03 11:28:20,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 11:28:21,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-03 11:28:21,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/17 HTTP/1.1" 200 None
2024-12-03 11:28:22,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/17/comments HTTP/1.1" 200 None
2024-12-03 11:28:22,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95 HTTP/1.1" 200 None
2024-12-03 11:28:23,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 11:28:23,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-03 11:28:24,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2024-12-03 11:28:24,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2024-12-03 11:28:25,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2024-12-03 11:28:25,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-12-03 11:28:26,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 11:28:26,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-12-03 11:28:27,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2024-12-03 11:28:27,081 [    scc.repo] DEBUG   - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-12-03 11:28:27,082 [    scc.repo] DEBUG ## Branches found:
2024-12-03 11:28:27,082 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-12-03 11:28:27,082 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:27,082 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:27,088 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2024-12-03 11:28:27,092 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 11:28:27,092 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2024-12-03 11:28:27,098 [     scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2024-12-03 11:28:27,103 [     scc.git] DEBUG Already up to date.

2024-12-03 11:28:27,103 [     scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2024-12-03 11:28:27,407 [     scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2024-12-03 11:28:27,407 [     scc.git] DEBUG  * branch            refs/pull/10/head -> FETCH_HEAD
2024-12-03 11:28:27,412 [     scc.git] DEBUG ## Unique users: []
2024-12-03 11:28:27,412 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:27,412 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:27,417 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-12-03 11:28:27,422 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:27,427 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-12-03 11:28:27,437 [     scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2024-12-03 11:28:27,438 [     scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2024-12-03 11:28:27,438 [     scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-03 11:28:27,438 [     scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-03 11:28:27,443 [     scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-12-03 11:28:27,449 [     scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0
2024-12-03 11:28:27,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:27,594 [     scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-12-03 11:28:27,600 [     scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-12-03 11:28:27,605 [     scc.git] INFO    - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#267](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/consoleText) for more details.
Possible conflicts:
  - Upstream changes
    - omero_web_zarr/urls.py

--conflicts

2024-12-03 11:28:27,610 [  scc.config] DEBUG Found github.token
2024-12-03 11:28:27,611 [     scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2024-12-03 11:28:27,611 [     scc.git] DEBUG Calling 'git submodule update'
2024-12-03 11:28:27,649 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:27,650 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:27,655 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 11:28:27,692 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 11:28:27,698 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ec821abb0> has no local changes
2024-12-03 11:28:27,698 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-web-zarr
Excluded PRs:
  - PR 18 will-moore 'Build' (status: failure)
  - PR 17 jburel 'Build' (status: failure)
  - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.

Conflicting PRs (not included):
  - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'

Generated by OMERO-plugins-push#267 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/)'
2024-12-03 11:28:27,706 [     scc.git] DEBUG [detached HEAD df75b2f] merge master -Dorg -Ssuccess-only
2024-12-03 11:28:27,706 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:27,706 [    scc.repo] DEBUG ## PRs found:
2024-12-03 11:28:28,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2
2024-12-03 11:28:28,006 [    scc.repo] DEBUG ## Branches found:
2024-12-03 11:28:28,006 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-12-03 11:28:28,006 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:28,006 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:28,012 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 11:28:28,016 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 11:28:28,017 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 11:28:28,022 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 11:28:28,031 [     scc.git] DEBUG Updating adfa132..70b01ed

2024-12-03 11:28:28,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls/24 HTTP/1.1" 200 None
2024-12-03 11:28:28,713 [     scc.git] DEBUG ## Unique users: []
2024-12-03 11:28:28,713 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:28,713 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:28,719 [     scc.git] DEBUG Calling 'git submodule update'
2024-12-03 11:28:28,758 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:28,758 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:28,763 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 11:28:28,800 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 11:28:28,805 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ec81efb80> has no local changes
2024-12-03 11:28:28,806 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: openmicroscopy/omero-weberror
Updating adfa132..70b01ed
Previously merged:
  - PR 24 jburel 'Build'


Generated by OMERO-plugins-push#267 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/)'
2024-12-03 11:28:28,813 [     scc.git] DEBUG [detached HEAD 7993c47] merge master -Dorg -Ssuccess-only
2024-12-03 11:28:28,814 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:28,814 [    scc.repo] DEBUG ## PRs found:
2024-12-03 11:28:29,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2
2024-12-03 11:28:29,164 [    scc.repo] DEBUG ## Branches found:
2024-12-03 11:28:29,164 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-12-03 11:28:29,164 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:29,164 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:29,170 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 11:28:29,175 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 11:28:29,175 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 11:28:29,180 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 11:28:29,190 [     scc.git] DEBUG Updating 8da48e1..5bfef29

2024-12-03 11:28:29,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls/36 HTTP/1.1" 200 None
2024-12-03 11:28:29,835 [     scc.git] DEBUG ## Unique users: []
2024-12-03 11:28:29,835 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:29,835 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:29,841 [     scc.git] DEBUG Calling 'git submodule update'
2024-12-03 11:28:29,881 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:29,882 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:29,887 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 11:28:29,927 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 11:28:29,934 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ec81948b0> has no local changes
2024-12-03 11:28:29,934 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: openmicroscopy/omero-webtest
Updating 8da48e1..5bfef29
Previously merged:
  - PR 36 jburel 'Build'


Generated by OMERO-plugins-push#267 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/)'
2024-12-03 11:28:29,942 [     scc.git] DEBUG [detached HEAD e4bf9f1] merge master -Dorg -Ssuccess-only
2024-12-03 11:28:29,942 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:29,943 [    scc.repo] DEBUG ## PRs found:
2024-12-03 11:28:30,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2024-12-03 11:28:30,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2024-12-03 11:28:31,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2024-12-03 11:28:31,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-12-03 11:28:32,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 11:28:32,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-12-03 11:28:33,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2024-12-03 11:28:33,199 [    scc.repo] DEBUG   - PR 100 dominikl 'Run tests properly'
2024-12-03 11:28:33,199 [    scc.repo] DEBUG ## Branches found:
2024-12-03 11:28:33,199 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-12-03 11:28:33,199 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:33,199 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:33,205 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-03 11:28:33,210 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 11:28:33,210 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-03 11:28:33,216 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-03 11:28:33,221 [     scc.git] DEBUG Already up to date.

2024-12-03 11:28:33,221 [     scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2024-12-03 11:28:33,651 [     scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2024-12-03 11:28:33,652 [     scc.git] DEBUG  * branch            refs/pull/100/head -> FETCH_HEAD
2024-12-03 11:28:33,657 [     scc.git] DEBUG ## Unique users: []
2024-12-03 11:28:33,657 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:33,657 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:33,663 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-12-03 11:28:33,668 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:33,673 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-12-03 11:28:33,776 [     scc.git] DEBUG Auto-merging Dockerfile
2024-12-03 11:28:33,777 [     scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2024-12-03 11:28:33,777 [     scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-03 11:28:33,777 [     scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-03 11:28:33,783 [     scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-12-03 11:28:33,790 [     scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2024-12-03 11:28:33,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:33,931 [     scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-12-03 11:28:33,939 [     scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-12-03 11:28:33,945 [     scc.git] INFO    - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#267](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/consoleText) for more details.
Possible conflicts:
  - Upstream changes
    - Dockerfile

--conflicts

2024-12-03 11:28:33,950 [  scc.config] DEBUG Found github.token
2024-12-03 11:28:33,950 [     scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2024-12-03 11:28:33,951 [     scc.git] DEBUG Calling 'git submodule update'
2024-12-03 11:28:33,992 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:33,992 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:33,998 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 11:28:34,039 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 11:28:34,046 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ec81945b0> has no local changes
2024-12-03 11:28:34,047 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/rOMERO-gateway
Already up to date.

Conflicting PRs (not included):
  - PR 100 dominikl 'Run tests properly'

Generated by OMERO-plugins-push#267 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/)'
2024-12-03 11:28:34,056 [     scc.git] DEBUG [detached HEAD 8e5181e] merge master -Dorg -Ssuccess-only
2024-12-03 11:28:34,057 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:34,057 [     scc.git] INFO  Overriding base-branch from master to develop
2024-12-03 11:28:34,057 [    scc.repo] DEBUG ## PRs found:
2024-12-03 11:28:34,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-12-03 11:28:35,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-12-03 11:28:35,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2024-12-03 11:28:36,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-12-03 11:28:36,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 11:28:37,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-03 11:28:37,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-12-03 11:28:37,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-12-03 11:28:37,962 [    scc.repo] DEBUG   - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-12-03 11:28:38,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-12-03 11:28:39,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-12-03 11:28:39,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545/issues/216/comments?page=2 HTTP/1.1" 200 None
2024-12-03 11:28:40,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-12-03 11:28:40,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-12-03 11:28:40,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-12-03 11:28:41,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-12-03 11:28:42,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-12-03 11:28:42,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-03 11:28:42,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-12-03 11:28:43,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-12-03 11:28:43,354 [    scc.repo] DEBUG   - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-12-03 11:28:43,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-12-03 11:28:44,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-12-03 11:28:44,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-12-03 11:28:45,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-12-03 11:28:45,369 [    scc.repo] DEBUG ## Branches found:
2024-12-03 11:28:45,369 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-12-03 11:28:45,369 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:45,369 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:45,376 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-12-03 11:28:45,381 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-03 11:28:45,381 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-12-03 11:28:45,386 [     scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-12-03 11:28:45,393 [     scc.git] DEBUG Already up to date.

2024-12-03 11:28:45,393 [     scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-12-03 11:28:45,711 [     scc.git] DEBUG From https://github.com/ome/scripts
2024-12-03 11:28:45,712 [     scc.git] DEBUG  * branch            refs/pull/202/head -> FETCH_HEAD
2024-12-03 11:28:45,716 [     scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-12-03 11:28:46,307 [     scc.git] DEBUG From https://github.com/ome/scripts
2024-12-03 11:28:46,307 [     scc.git] DEBUG  * branch            refs/pull/223/head -> FETCH_HEAD
2024-12-03 11:28:46,312 [     scc.git] DEBUG ## Unique users: []
2024-12-03 11:28:46,312 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:46,312 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:46,318 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-12-03 11:28:46,324 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:46,329 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-12-03 11:28:46,449 [     scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-12-03 11:28:46,449 [     scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-12-03 11:28:46,449 [     scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-03 11:28:46,449 [     scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-03 11:28:46,455 [     scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-12-03 11:28:46,462 [     scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-12-03 11:28:46,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:46,684 [     scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-12-03 11:28:46,692 [     scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-12-03 11:28:46,697 [     scc.git] INFO    - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#267](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/consoleText) for more details.
Possible conflicts:
  - Upstream changes
    - omero/annotation_scripts/KeyVal_to_csv.py

--conflicts

2024-12-03 11:28:46,702 [  scc.config] DEBUG Found github.token
2024-12-03 11:28:46,702 [     scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-12-03 11:28:46,702 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-12-03 11:28:46,707 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:46,712 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-12-03 11:28:46,722 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-03 11:28:46,724 [     scc.git] DEBUG  omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-12-03 11:28:46,724 [     scc.git] DEBUG  1 file changed, 8 insertions(+), 1 deletion(-)
2024-12-03 11:28:47,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:47,065 [     scc.git] DEBUG Calling 'git submodule update'
2024-12-03 11:28:47,104 [     scc.git] DEBUG Get sha1 of %s
2024-12-03 11:28:47,104 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-03 11:28:47,109 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 11:28:47,148 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 11:28:47,154 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ec8247f10> has no local changes
2024-12-03 11:28:47,155 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/scripts
Excluded PRs:
  - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
  - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
  - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
  - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.

Merged PRs:
  - PR 223 will-moore 'don't attempt ROI stats on big images'

Conflicting PRs (not included):
  - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'

Generated by OMERO-plugins-push#267 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/)'
2024-12-03 11:28:47,163 [     scc.git] DEBUG [detached HEAD d3281fd] merge master -Dorg -Ssuccess-only
2024-12-03 11:28:47,163 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:47,163 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-03 11:28:47,236 [  scc.config] DEBUG Found submodule.minimal-omero-client.url
2024-12-03 11:28:47,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:47,464 [  scc.config] DEBUG Found submodule.minimal-omero-client.branch
2024-12-03 11:28:47,468 [  scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2024-12-03 11:28:47,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:47,860 [  scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2024-12-03 11:28:47,865 [  scc.config] DEBUG Found submodule.omero-cli-render.url
2024-12-03 11:28:48,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:48,247 [  scc.config] DEBUG Found submodule.omero-cli-render.branch
2024-12-03 11:28:48,252 [  scc.config] DEBUG Found submodule.omero-cli-zarr.url
2024-12-03 11:28:48,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:48,643 [  scc.config] DEBUG Found submodule.omero-figure.url
2024-12-03 11:28:49,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:49,074 [  scc.config] DEBUG Found submodule.omero-figure.branch
2024-12-03 11:28:49,078 [  scc.config] DEBUG Found submodule.omero-fpbioimage.url
2024-12-03 11:28:49,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:49,456 [  scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2024-12-03 11:28:49,461 [  scc.config] DEBUG Found submodule.omero-gallery.url
2024-12-03 11:28:49,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:49,849 [  scc.config] DEBUG Found submodule.omero-gallery.branch
2024-12-03 11:28:49,854 [  scc.config] DEBUG Found submodule.omero-iviewer.url
2024-12-03 11:28:50,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:50,239 [  scc.config] DEBUG Found submodule.omero-iviewer.branch
2024-12-03 11:28:50,243 [  scc.config] DEBUG Found submodule.omero-mapr.url
2024-12-03 11:28:50,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:50,640 [  scc.config] DEBUG Found submodule.omero-mapr.branch
2024-12-03 11:28:50,644 [  scc.config] DEBUG Found submodule.omero-metadata.url
2024-12-03 11:28:51,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:51,031 [  scc.config] DEBUG Found submodule.omero-metadata.branch
2024-12-03 11:28:51,036 [  scc.config] DEBUG Found submodule.omero-parade.url
2024-12-03 11:28:51,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:51,422 [  scc.config] DEBUG Found submodule.omero-parade.branch
2024-12-03 11:28:51,426 [  scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2024-12-03 11:28:51,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:51,820 [  scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2024-12-03 11:28:51,824 [  scc.config] DEBUG Found submodule.omero-rois.url
2024-12-03 11:28:52,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:52,233 [  scc.config] DEBUG Found submodule.omero-signup.url
2024-12-03 11:28:52,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:52,632 [  scc.config] DEBUG Found submodule.omero-test-infra.url
2024-12-03 11:28:53,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:53,022 [  scc.config] DEBUG Found submodule.omero-test-infra.branch
2024-12-03 11:28:53,026 [  scc.config] DEBUG Found submodule.omero-upload.url
2024-12-03 11:28:53,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:53,410 [  scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2024-12-03 11:28:53,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:53,803 [  scc.config] DEBUG Found submodule.omero-web-zarr.url
2024-12-03 11:28:54,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:54,211 [  scc.config] DEBUG Found submodule.omero-web-zarr.branch
2024-12-03 11:28:54,217 [  scc.config] DEBUG Found submodule.omero-weberror.url
2024-12-03 11:28:54,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:54,584 [  scc.config] DEBUG Found submodule.omero-weberror.branch
2024-12-03 11:28:54,589 [  scc.config] DEBUG Found submodule.omero-webtest.url
2024-12-03 11:28:54,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:54,969 [  scc.config] DEBUG Found submodule.omero-webtest.branch
2024-12-03 11:28:54,974 [  scc.config] DEBUG Found submodule.rOMERO-gateway.url
2024-12-03 11:28:55,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:55,354 [  scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2024-12-03 11:28:55,359 [  scc.config] DEBUG Found submodule.scripts.url
2024-12-03 11:28:55,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-03 11:28:55,742 [  scc.config] DEBUG Found submodule.scripts.branch
2024-12-03 11:28:55,743 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-12-03 11:28:55,819 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ecdf7aee0> has local changes
2024-12-03 11:28:55,819 [     scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-plugins
Already up to date.

Merged PRs:
  - PR 406 dependabot[bot] 'Bump omero-iviewer from `a8f380f` to `b4102d4`'
  - PR 407 dependabot[bot] 'Bump omero-gallery from `56f4435` to `2a621da`'
  - PR 408 dependabot[bot] 'Bump omero-cli-render from `173cac0` to `c0517ed`'
  - PR 409 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `0a557da`'
  - PR 411 dependabot[bot] 'Bump omero-figure from `24444fe` to `1dfb138`'

Repository: ome/minimal-omero-client
Updating 4628e82..ca8c2ea
Previously merged:
  - PR 67 jburel 'Gateway 5.10.0'
  - PR 68 jburel 'Bump action '


Repository: ome/omero-cli-duplicate
Excluded PRs:
  - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Updating 027b3e6..4777ef8
Previously merged:
  - PR 27 jburel 'Build'
  - PR 25 jburel 'review message'


Repository: ome/omero-cli-render
Excluded PRs:
  - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
  - PR 59 will-moore 'Apply settings to Plate' (status: failure)
  - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.


Repository: ome/omero-cli-zarr
Excluded PRs:
  - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Updating 9b73dd9..11d3587
Previously merged:
  - PR 165 jburel 'Build'

Merged PRs:
  - PR 147 will-moore 'Name option'

Conflicting PRs (not included):
  - PR 102 will-moore 'Zarr export tests'
  - PR 123 will-moore 'Support export of Fileset:ID'

Repository: ome/omero-figure
Excluded PRs:
  - PR 600 Rdornier 'Label on rois' (user: Rdornier)
  - PR 543 will-moore 'Plate well labels' (exclude comment)
Already up to date.

Merged PRs:
  - PR 592 will-moore 'Filter owners and groups dropdown lists'
  - PR 602 will-moore 'Changelog 7.2.0'
  - PR 603 will-moore 'Inset bugfixes'

Repository: ome/omero-fpbioimage
Updating e5b3ca3..3b6c05a
Previously merged:
  - PR 30 jburel 'Build'

Merged PRs:
  - PR 18 jburel 'default  size z value'

Repository: ome/omero-gallery
Already up to date.

Merged PRs:
  - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
  - PR 114 dependabot[bot] 'Bump tar and fsevents'
  - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
  - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'

Conflicting PRs (not included):
  - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
  - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'

Repository: ome/omero-iviewer
Excluded PRs:
  - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
  - PR 420 will-moore 'Add release process to README' (exclude comment)
  - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Already up to date.

Merged PRs:
  - PR 460 will-moore 'Channel min spinner fix'
  - PR 465 will-moore 'Save as Figure'
  - PR 471 will-moore 'Z projection disabled tooltip'

Repository: ome/omero-mapr
Excluded PRs:
  - PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.

Merged PRs:
  - PR 74 will-moore 'mapr extension of webclient'

Repository: ome/omero-metadata
Already up to date.

Merged PRs:
  - PR 89 jburel 'Build'

Conflicting PRs (not included):
  - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
  - PR 64 will-moore 'Support images_by_name for Screen and Plate'

Repository: ome/omero-parade
Excluded PRs:
  - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
  - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
  - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Updating 5d441c2..fb5ae86
Previously merged:
  - PR 133 jburel 'Build'
  - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
  - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
  - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'


Repository: ome/omero-prometheus-tools
Excluded PRs:
  - PR 15 jburel 'Build' (status: failure)
Already up to date.

Merged PRs:
  - PR 14 jburel 'use conda-forge channel'

Repository: ome/omero-rois
Excluded PRs:
  - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.

Merged PRs:
  - PR 6 dominikl 'Add method to create masks grouped by label id'
  - PR 29 jburel 'Build'

Repository: ome/omero-signup
Already up to date.

Merged PRs:
  - PR 21 jburel 'Build'

Conflicting PRs (not included):
  - PR 14 manics 'Add pre-commit (black, flake8)'

Repository: openmicroscopy/omero-test-infra
Already up to date.

Merged PRs:
  - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'

Repository: ome/omero-upload
Updating aca9e9c..100f6ae
Previously merged:
  - PR 13 jburel 'Build'


Repository: ome/omero-virtual-microscope
Already up to date.

Merged PRs:
  - PR 20 jburel 'Build'

Repository: ome/omero-web-zarr
Excluded PRs:
  - PR 18 will-moore 'Build' (status: failure)
  - PR 17 jburel 'Build' (status: failure)
  - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.

Conflicting PRs (not included):
  - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'

Repository: openmicroscopy/omero-weberror
Updating adfa132..70b01ed
Previously merged:
  - PR 24 jburel 'Build'


Repository: openmicroscopy/omero-webtest
Updating 8da48e1..5bfef29
Previously merged:
  - PR 36 jburel 'Build'


Repository: ome/rOMERO-gateway
Already up to date.

Conflicting PRs (not included):
  - PR 100 dominikl 'Run tests properly'

Repository: ome/scripts
Excluded PRs:
  - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
  - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
  - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
  - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.

Merged PRs:
  - PR 223 will-moore 'don't attempt ROI stats on big images'

Conflicting PRs (not included):
  - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'

Generated by OMERO-plugins-push#267 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/267/)'
2024-12-03 11:28:55,919 [     scc.git] DEBUG [detached HEAD ce91dc4] merge master -Dorg -Ssuccess-only
2024-12-03 11:28:55,919 [     scc.git] DEBUG  23 files changed, 44 insertions(+), 44 deletions(-)
2024-12-03 11:28:55,919 [   scc.merge] INFO  Repository: ome/omero-plugins
2024-12-03 11:28:55,920 [   scc.merge] INFO  Already up to date.
2024-12-03 11:28:55,920 [   scc.merge] INFO  
2024-12-03 11:28:55,920 [   scc.merge] INFO  Merged PRs:
2024-12-03 11:28:55,920 [   scc.merge] INFO    - PR 406 dependabot[bot] 'Bump omero-iviewer from `a8f380f` to `b4102d4`'
2024-12-03 11:28:55,920 [   scc.merge] INFO    - PR 407 dependabot[bot] 'Bump omero-gallery from `56f4435` to `2a621da`'
2024-12-03 11:28:55,920 [   scc.merge] INFO    - PR 408 dependabot[bot] 'Bump omero-cli-render from `173cac0` to `c0517ed`'
2024-12-03 11:28:55,920 [   scc.merge] INFO    - PR 409 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `0a557da`'
2024-12-03 11:28:55,920 [   scc.merge] INFO    - PR 411 dependabot[bot] 'Bump omero-figure from `24444fe` to `1dfb138`'
2024-12-03 11:28:55,920 [   scc.merge] INFO  
2024-12-03 11:28:55,920 [   scc.merge] INFO  Repository: ome/minimal-omero-client
2024-12-03 11:28:55,920 [   scc.merge] INFO  Updating 4628e82..ca8c2ea
2024-12-03 11:28:55,920 [   scc.merge] INFO  Previously merged:
2024-12-03 11:28:55,920 [   scc.merge] INFO    - PR 67 jburel 'Gateway 5.10.0'
2024-12-03 11:28:55,920 [   scc.merge] INFO    - PR 68 jburel 'Bump action '
2024-12-03 11:28:55,920 [   scc.merge] INFO  
2024-12-03 11:28:55,920 [   scc.merge] INFO  
2024-12-03 11:28:55,920 [   scc.merge] INFO  Repository: ome/omero-cli-duplicate
2024-12-03 11:28:55,921 [   scc.merge] INFO  Excluded PRs:
2024-12-03 11:28:55,921 [   scc.merge] INFO    - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2024-12-03 11:28:55,921 [   scc.merge] INFO  Updating 027b3e6..4777ef8
2024-12-03 11:28:55,921 [   scc.merge] INFO  Previously merged:
2024-12-03 11:28:55,921 [   scc.merge] INFO    - PR 27 jburel 'Build'
2024-12-03 11:28:55,921 [   scc.merge] INFO    - PR 25 jburel 'review message'
2024-12-03 11:28:55,921 [   scc.merge] INFO  
2024-12-03 11:28:55,921 [   scc.merge] INFO  
2024-12-03 11:28:55,921 [   scc.merge] INFO  Repository: ome/omero-cli-render
2024-12-03 11:28:55,921 [   scc.merge] INFO  Excluded PRs:
2024-12-03 11:28:55,921 [   scc.merge] INFO    - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
2024-12-03 11:28:55,921 [   scc.merge] INFO    - PR 59 will-moore 'Apply settings to Plate' (status: failure)
2024-12-03 11:28:55,921 [   scc.merge] INFO    - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2024-12-03 11:28:55,921 [   scc.merge] INFO  Already up to date.
2024-12-03 11:28:55,921 [   scc.merge] INFO  
2024-12-03 11:28:55,921 [   scc.merge] INFO  
2024-12-03 11:28:55,921 [   scc.merge] INFO  Repository: ome/omero-cli-zarr
2024-12-03 11:28:55,921 [   scc.merge] INFO  Excluded PRs:
2024-12-03 11:28:55,921 [   scc.merge] INFO    - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-12-03 11:28:55,921 [   scc.merge] INFO  Updating 9b73dd9..11d3587
2024-12-03 11:28:55,921 [   scc.merge] INFO  Previously merged:
2024-12-03 11:28:55,921 [   scc.merge] INFO    - PR 165 jburel 'Build'
2024-12-03 11:28:55,921 [   scc.merge] INFO  
2024-12-03 11:28:55,921 [   scc.merge] INFO  Merged PRs:
2024-12-03 11:28:55,921 [   scc.merge] INFO    - PR 147 will-moore 'Name option'
2024-12-03 11:28:55,921 [   scc.merge] INFO  
2024-12-03 11:28:55,921 [   scc.merge] INFO  Conflicting PRs (not included):
2024-12-03 11:28:55,921 [   scc.merge] INFO    - PR 102 will-moore 'Zarr export tests'
2024-12-03 11:28:55,921 [   scc.merge] INFO    - PR 123 will-moore 'Support export of Fileset:ID'
2024-12-03 11:28:55,921 [   scc.merge] INFO  
2024-12-03 11:28:55,921 [   scc.merge] INFO  Repository: ome/omero-figure
2024-12-03 11:28:55,921 [   scc.merge] INFO  Excluded PRs:
2024-12-03 11:28:55,921 [   scc.merge] INFO    - PR 600 Rdornier 'Label on rois' (user: Rdornier)
2024-12-03 11:28:55,921 [   scc.merge] INFO    - PR 543 will-moore 'Plate well labels' (exclude comment)
2024-12-03 11:28:55,921 [   scc.merge] INFO  Already up to date.
2024-12-03 11:28:55,921 [   scc.merge] INFO  
2024-12-03 11:28:55,922 [   scc.merge] INFO  Merged PRs:
2024-12-03 11:28:55,922 [   scc.merge] INFO    - PR 592 will-moore 'Filter owners and groups dropdown lists'
2024-12-03 11:28:55,922 [   scc.merge] INFO    - PR 602 will-moore 'Changelog 7.2.0'
2024-12-03 11:28:55,922 [   scc.merge] INFO    - PR 603 will-moore 'Inset bugfixes'
2024-12-03 11:28:55,922 [   scc.merge] INFO  
2024-12-03 11:28:55,922 [   scc.merge] INFO  Repository: ome/omero-fpbioimage
2024-12-03 11:28:55,922 [   scc.merge] INFO  Updating e5b3ca3..3b6c05a
2024-12-03 11:28:55,922 [   scc.merge] INFO  Previously merged:
2024-12-03 11:28:55,922 [   scc.merge] INFO    - PR 30 jburel 'Build'
2024-12-03 11:28:55,922 [   scc.merge] INFO  
2024-12-03 11:28:55,922 [   scc.merge] INFO  Merged PRs:
2024-12-03 11:28:55,922 [   scc.merge] INFO    - PR 18 jburel 'default  size z value'
2024-12-03 11:28:55,922 [   scc.merge] INFO  
2024-12-03 11:28:55,922 [   scc.merge] INFO  Repository: ome/omero-gallery
2024-12-03 11:28:55,922 [   scc.merge] INFO  Already up to date.
2024-12-03 11:28:55,922 [   scc.merge] INFO  
2024-12-03 11:28:55,922 [   scc.merge] INFO  Merged PRs:
2024-12-03 11:28:55,922 [   scc.merge] INFO    - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2024-12-03 11:28:55,922 [   scc.merge] INFO    - PR 114 dependabot[bot] 'Bump tar and fsevents'
2024-12-03 11:28:55,922 [   scc.merge] INFO    - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2024-12-03 11:28:55,922 [   scc.merge] INFO    - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2024-12-03 11:28:55,922 [   scc.merge] INFO  
2024-12-03 11:28:55,922 [   scc.merge] INFO  Conflicting PRs (not included):
2024-12-03 11:28:55,922 [   scc.merge] INFO    - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2024-12-03 11:28:55,922 [   scc.merge] INFO    - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2024-12-03 11:28:55,922 [   scc.merge] INFO  
2024-12-03 11:28:55,922 [   scc.merge] INFO  Repository: ome/omero-iviewer
2024-12-03 11:28:55,922 [   scc.merge] INFO  Excluded PRs:
2024-12-03 11:28:55,922 [   scc.merge] INFO    - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
2024-12-03 11:28:55,922 [   scc.merge] INFO    - PR 420 will-moore 'Add release process to README' (exclude comment)
2024-12-03 11:28:55,922 [   scc.merge] INFO    - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2024-12-03 11:28:55,922 [   scc.merge] INFO  Already up to date.
2024-12-03 11:28:55,922 [   scc.merge] INFO  
2024-12-03 11:28:55,922 [   scc.merge] INFO  Merged PRs:
2024-12-03 11:28:55,922 [   scc.merge] INFO    - PR 460 will-moore 'Channel min spinner fix'
2024-12-03 11:28:55,922 [   scc.merge] INFO    - PR 465 will-moore 'Save as Figure'
2024-12-03 11:28:55,922 [   scc.merge] INFO    - PR 471 will-moore 'Z projection disabled tooltip'
2024-12-03 11:28:55,923 [   scc.merge] INFO  
2024-12-03 11:28:55,923 [   scc.merge] INFO  Repository: ome/omero-mapr
2024-12-03 11:28:55,923 [   scc.merge] INFO  Excluded PRs:
2024-12-03 11:28:55,923 [   scc.merge] INFO    - PR 79 will-moore 'Right panel title' (exclude comment)
2024-12-03 11:28:55,923 [   scc.merge] INFO  Already up to date.
2024-12-03 11:28:55,923 [   scc.merge] INFO  
2024-12-03 11:28:55,923 [   scc.merge] INFO  Merged PRs:
2024-12-03 11:28:55,923 [   scc.merge] INFO    - PR 74 will-moore 'mapr extension of webclient'
2024-12-03 11:28:55,923 [   scc.merge] INFO  
2024-12-03 11:28:55,923 [   scc.merge] INFO  Repository: ome/omero-metadata
2024-12-03 11:28:55,923 [   scc.merge] INFO  Already up to date.
2024-12-03 11:28:55,923 [   scc.merge] INFO  
2024-12-03 11:28:55,923 [   scc.merge] INFO  Merged PRs:
2024-12-03 11:28:55,923 [   scc.merge] INFO    - PR 89 jburel 'Build'
2024-12-03 11:28:55,923 [   scc.merge] INFO  
2024-12-03 11:28:55,923 [   scc.merge] INFO  Conflicting PRs (not included):
2024-12-03 11:28:55,923 [   scc.merge] INFO    - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-12-03 11:28:55,923 [   scc.merge] INFO    - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-12-03 11:28:55,923 [   scc.merge] INFO  
2024-12-03 11:28:55,923 [   scc.merge] INFO  Repository: ome/omero-parade
2024-12-03 11:28:55,923 [   scc.merge] INFO  Excluded PRs:
2024-12-03 11:28:55,923 [   scc.merge] INFO    - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2024-12-03 11:28:55,923 [   scc.merge] INFO    - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2024-12-03 11:28:55,923 [   scc.merge] INFO    - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2024-12-03 11:28:55,923 [   scc.merge] INFO  Updating 5d441c2..fb5ae86
2024-12-03 11:28:55,923 [   scc.merge] INFO  Previously merged:
2024-12-03 11:28:55,923 [   scc.merge] INFO    - PR 133 jburel 'Build'
2024-12-03 11:28:55,923 [   scc.merge] INFO    - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
2024-12-03 11:28:55,923 [   scc.merge] INFO    - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
2024-12-03 11:28:55,923 [   scc.merge] INFO    - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
2024-12-03 11:28:55,923 [   scc.merge] INFO  
2024-12-03 11:28:55,923 [   scc.merge] INFO  
2024-12-03 11:28:55,923 [   scc.merge] INFO  Repository: ome/omero-prometheus-tools
2024-12-03 11:28:55,923 [   scc.merge] INFO  Excluded PRs:
2024-12-03 11:28:55,923 [   scc.merge] INFO    - PR 15 jburel 'Build' (status: failure)
2024-12-03 11:28:55,923 [   scc.merge] INFO  Already up to date.
2024-12-03 11:28:55,923 [   scc.merge] INFO  
2024-12-03 11:28:55,924 [   scc.merge] INFO  Merged PRs:
2024-12-03 11:28:55,924 [   scc.merge] INFO    - PR 14 jburel 'use conda-forge channel'
2024-12-03 11:28:55,924 [   scc.merge] INFO  
2024-12-03 11:28:55,924 [   scc.merge] INFO  Repository: ome/omero-rois
2024-12-03 11:28:55,924 [   scc.merge] INFO  Excluded PRs:
2024-12-03 11:28:55,924 [   scc.merge] INFO    - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-12-03 11:28:55,924 [   scc.merge] INFO  Already up to date.
2024-12-03 11:28:55,924 [   scc.merge] INFO  
2024-12-03 11:28:55,924 [   scc.merge] INFO  Merged PRs:
2024-12-03 11:28:55,924 [   scc.merge] INFO    - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-12-03 11:28:55,924 [   scc.merge] INFO    - PR 29 jburel 'Build'
2024-12-03 11:28:55,924 [   scc.merge] INFO  
2024-12-03 11:28:55,924 [   scc.merge] INFO  Repository: ome/omero-signup
2024-12-03 11:28:55,924 [   scc.merge] INFO  Already up to date.
2024-12-03 11:28:55,924 [   scc.merge] INFO  
2024-12-03 11:28:55,924 [   scc.merge] INFO  Merged PRs:
2024-12-03 11:28:55,924 [   scc.merge] INFO    - PR 21 jburel 'Build'
2024-12-03 11:28:55,924 [   scc.merge] INFO  
2024-12-03 11:28:55,924 [   scc.merge] INFO  Conflicting PRs (not included):
2024-12-03 11:28:55,924 [   scc.merge] INFO    - PR 14 manics 'Add pre-commit (black, flake8)'
2024-12-03 11:28:55,924 [   scc.merge] INFO  
2024-12-03 11:28:55,924 [   scc.merge] INFO  Repository: openmicroscopy/omero-test-infra
2024-12-03 11:28:55,924 [   scc.merge] INFO  Already up to date.
2024-12-03 11:28:55,924 [   scc.merge] INFO  
2024-12-03 11:28:55,924 [   scc.merge] INFO  Merged PRs:
2024-12-03 11:28:55,924 [   scc.merge] INFO    - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-12-03 11:28:55,924 [   scc.merge] INFO  
2024-12-03 11:28:55,924 [   scc.merge] INFO  Repository: ome/omero-upload
2024-12-03 11:28:55,924 [   scc.merge] INFO  Updating aca9e9c..100f6ae
2024-12-03 11:28:55,924 [   scc.merge] INFO  Previously merged:
2024-12-03 11:28:55,924 [   scc.merge] INFO    - PR 13 jburel 'Build'
2024-12-03 11:28:55,924 [   scc.merge] INFO  
2024-12-03 11:28:55,924 [   scc.merge] INFO  
2024-12-03 11:28:55,924 [   scc.merge] INFO  Repository: ome/omero-virtual-microscope
2024-12-03 11:28:55,924 [   scc.merge] INFO  Already up to date.
2024-12-03 11:28:55,924 [   scc.merge] INFO  
2024-12-03 11:28:55,924 [   scc.merge] INFO  Merged PRs:
2024-12-03 11:28:55,925 [   scc.merge] INFO    - PR 20 jburel 'Build'
2024-12-03 11:28:55,925 [   scc.merge] INFO  
2024-12-03 11:28:55,925 [   scc.merge] INFO  Repository: ome/omero-web-zarr
2024-12-03 11:28:55,925 [   scc.merge] INFO  Excluded PRs:
2024-12-03 11:28:55,925 [   scc.merge] INFO    - PR 18 will-moore 'Build' (status: failure)
2024-12-03 11:28:55,925 [   scc.merge] INFO    - PR 17 jburel 'Build' (status: failure)
2024-12-03 11:28:55,925 [   scc.merge] INFO    - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2024-12-03 11:28:55,925 [   scc.merge] INFO  Already up to date.
2024-12-03 11:28:55,925 [   scc.merge] INFO  
2024-12-03 11:28:55,925 [   scc.merge] INFO  Conflicting PRs (not included):
2024-12-03 11:28:55,925 [   scc.merge] INFO    - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-12-03 11:28:55,925 [   scc.merge] INFO  
2024-12-03 11:28:55,925 [   scc.merge] INFO  Repository: openmicroscopy/omero-weberror
2024-12-03 11:28:55,925 [   scc.merge] INFO  Updating adfa132..70b01ed
2024-12-03 11:28:55,925 [   scc.merge] INFO  Previously merged:
2024-12-03 11:28:55,925 [   scc.merge] INFO    - PR 24 jburel 'Build'
2024-12-03 11:28:55,925 [   scc.merge] INFO  
2024-12-03 11:28:55,925 [   scc.merge] INFO  
2024-12-03 11:28:55,925 [   scc.merge] INFO  Repository: openmicroscopy/omero-webtest
2024-12-03 11:28:55,925 [   scc.merge] INFO  Updating 8da48e1..5bfef29
2024-12-03 11:28:55,925 [   scc.merge] INFO  Previously merged:
2024-12-03 11:28:55,925 [   scc.merge] INFO    - PR 36 jburel 'Build'
2024-12-03 11:28:55,925 [   scc.merge] INFO  
2024-12-03 11:28:55,925 [   scc.merge] INFO  
2024-12-03 11:28:55,925 [   scc.merge] INFO  Repository: ome/rOMERO-gateway
2024-12-03 11:28:55,925 [   scc.merge] INFO  Already up to date.
2024-12-03 11:28:55,925 [   scc.merge] INFO  
2024-12-03 11:28:55,925 [   scc.merge] INFO  Conflicting PRs (not included):
2024-12-03 11:28:55,925 [   scc.merge] INFO    - PR 100 dominikl 'Run tests properly'
2024-12-03 11:28:55,925 [   scc.merge] INFO  
2024-12-03 11:28:55,925 [   scc.merge] INFO  Repository: ome/scripts
2024-12-03 11:28:55,925 [   scc.merge] INFO  Excluded PRs:
2024-12-03 11:28:55,925 [   scc.merge] INFO    - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-12-03 11:28:55,925 [   scc.merge] INFO    - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-12-03 11:28:55,925 [   scc.merge] INFO    - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-12-03 11:28:55,925 [   scc.merge] INFO    - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-12-03 11:28:55,925 [   scc.merge] INFO  Already up to date.
2024-12-03 11:28:55,926 [   scc.merge] INFO  
2024-12-03 11:28:55,926 [   scc.merge] INFO  Merged PRs:
2024-12-03 11:28:55,926 [   scc.merge] INFO    - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-12-03 11:28:55,926 [   scc.merge] INFO  
2024-12-03 11:28:55,926 [   scc.merge] INFO  Conflicting PRs (not included):
2024-12-03 11:28:55,926 [   scc.merge] INFO    - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-12-03 11:28:55,926 [   scc.merge] INFO  
2024-12-03 11:28:55,926 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-12-03 11:28:55,926 [     scc.git] DEBUG Calling 'git remote'
2024-12-03 11:28:55,931 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2024-12-03 11:28:55,931 [     scc.git] DEBUG Calling 'git remote'
2024-12-03 11:28:55,936 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:55,936 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2024-12-03 11:28:55,936 [     scc.git] DEBUG Calling 'git remote'
2024-12-03 11:28:55,941 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:55,941 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2024-12-03 11:28:55,941 [     scc.git] DEBUG Calling 'git remote'
2024-12-03 11:28:55,946 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:55,946 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2024-12-03 11:28:55,946 [     scc.git] DEBUG Calling 'git remote'
2024-12-03 11:28:55,951 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:55,951 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2024-12-03 11:28:55,951 [     scc.git] DEBUG Calling 'git remote'
2024-12-03 11:28:55,956 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:55,956 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2024-12-03 11:28:55,956 [     scc.git] DEBUG Calling 'git remote'
2024-12-03 11:28:55,961 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:55,961 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-12-03 11:28:55,961 [     scc.git] DEBUG Calling 'git remote'
2024-12-03 11:28:55,966 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:55,966 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-12-03 11:28:55,966 [     scc.git] DEBUG Calling 'git remote'
2024-12-03 11:28:55,971 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:55,971 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-12-03 11:28:55,971 [     scc.git] DEBUG Calling 'git remote'
2024-12-03 11:28:55,975 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:55,976 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-12-03 11:28:55,976 [     scc.git] DEBUG Calling 'git remote'
2024-12-03 11:28:55,980 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:55,980 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-12-03 11:28:55,980 [     scc.git] DEBUG Calling 'git remote'
2024-12-03 11:28:55,985 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:55,985 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-12-03 11:28:55,985 [     scc.git] DEBUG Calling 'git remote'
2024-12-03 11:28:55,989 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:55,990 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-12-03 11:28:55,990 [     scc.git] DEBUG Calling 'git remote'
2024-12-03 11:28:55,995 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:55,995 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-12-03 11:28:55,995 [     scc.git] DEBUG Calling 'git remote'
2024-12-03 11:28:55,999 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:56,000 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-12-03 11:28:56,000 [     scc.git] DEBUG Calling 'git remote'
2024-12-03 11:28:56,004 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:56,004 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-12-03 11:28:56,005 [     scc.git] DEBUG Calling 'git remote'
2024-12-03 11:28:56,009 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:56,009 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-12-03 11:28:56,009 [     scc.git] DEBUG Calling 'git remote'
2024-12-03 11:28:56,014 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:56,014 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-12-03 11:28:56,014 [     scc.git] DEBUG Calling 'git remote'
2024-12-03 11:28:56,019 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:56,019 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-12-03 11:28:56,019 [     scc.git] DEBUG Calling 'git remote'
2024-12-03 11:28:56,024 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:56,024 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-12-03 11:28:56,024 [     scc.git] DEBUG Calling 'git remote'
2024-12-03 11:28:56,029 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:56,029 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-12-03 11:28:56,029 [     scc.git] DEBUG Calling 'git remote'
2024-12-03 11:28:56,033 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-03 11:28:56,033 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-12-03 11:28:56,034 [     scc.git] DEBUG Calling 'git remote'
2024-12-03 11:28:56,038 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
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WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
  warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
  warnings.warn(tmpl.format(**locals()))
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.10.0 to 5.10.1-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD cca81c0] Update component versions
 1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
HEAD detached from 027b3e6
nothing to commit, working tree clean
Entering 'omero-cli-render'
HEAD detached from c0517ed
nothing to commit, working tree clean
Entering 'omero-cli-zarr'
HEAD detached from 9b73dd9
Untracked files:
  (use "git add <file>..." to include in what will be committed)
	.eggs/

nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
HEAD detached from 1dfb1389
nothing to commit, working tree clean
Entering 'omero-fpbioimage'
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Entering 'omero-gallery'
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Entering 'omero-iviewer'
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Entering 'omero-mapr'
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Entering 'omero-metadata'
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Entering 'omero-parade'
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Entering 'omero-prometheus-tools'
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Entering 'omero-rois'
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Entering 'omero-signup'
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Entering 'omero-test-infra'
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Entering 'omero-upload'
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Entering 'omero-virtual-microscope'
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Entering 'omero-web-zarr'
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Entering 'omero-weberror'
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Entering 'omero-webtest'
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Entering 'rOMERO-gateway'
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Entering 'scripts'
HEAD detached from 312afbe
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[detached HEAD 5a9a979] Update component versions
 1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2024-12-03 11:29:43,643 [github.Reque] INFO  Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2024-12-03 11:29:52,772 [github.Reque] INFO  Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2024-12-03 11:29:55,162 [github.Reque] INFO  Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-12-03 11:29:59,721 [github.Reque] INFO  Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-12-03 11:30:40,940 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS