Console Output
Skipping 104 KB..
Full Loge mode 100644 Dockerfile
2024-04-11 00:43:04,688 [ scc.git] DEBUG delete mode 100644 Gruntfile.js
2024-04-11 00:43:04,688 [ scc.git] DEBUG create mode 100755 deploy_build.sh
2024-04-11 00:43:04,688 [ scc.git] DEBUG delete mode 100644 docs/demo/index.html
2024-04-11 00:43:04,688 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/backbone-1.0.0.js
2024-04-11 00:43:04,688 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/backbone.mousetrap/README.md
2024-04-11 00:43:04,689 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/bootstrap-3.0.0/css/bootstrap.css
2024-04-11 00:43:04,689 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/bootstrap-3.0.0/css/bootstrap.min.css
2024-04-11 00:43:04,689 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/bootstrap-3.0.0/fonts/glyphicons-halflings-regular.eot
2024-04-11 00:43:04,689 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/bootstrap-3.0.0/fonts/glyphicons-halflings-regular.svg
2024-04-11 00:43:04,689 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/bootstrap-3.0.0/fonts/glyphicons-halflings-regular.ttf
2024-04-11 00:43:04,689 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/bootstrap-3.0.0/fonts/glyphicons-halflings-regular.woff
2024-04-11 00:43:04,689 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/bootstrap-3.0.0/js/bootstrap.js
2024-04-11 00:43:04,689 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/bootstrap-3.0.0/js/bootstrap.min.js
2024-04-11 00:43:04,689 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/bootstrap-colorpicker/css/bootstrap-colorpicker.css
2024-04-11 00:43:04,689 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/bootstrap-colorpicker/css/bootstrap-colorpicker.min.css
2024-04-11 00:43:04,689 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/bootstrap-colorpicker/img/bootstrap-colorpicker/alpha-horizontal.png
2024-04-11 00:43:04,689 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/bootstrap-colorpicker/img/bootstrap-colorpicker/alpha.png
2024-04-11 00:43:04,689 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/bootstrap-colorpicker/img/bootstrap-colorpicker/hue.png
2024-04-11 00:43:04,689 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/bootstrap-colorpicker/img/bootstrap-colorpicker/saturation.png
2024-04-11 00:43:04,689 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/bootstrap-colorpicker/js/bootstrap-colorpicker.js
2024-04-11 00:43:04,689 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/bootstrap-colorpicker/js/bootstrap-colorpicker.min.js
2024-04-11 00:43:04,689 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/jquery-1.11.1/jquery.min.js
2024-04-11 00:43:04,689 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/jquery-ui-1.10.4/css/jquery.ui.base.css
2024-04-11 00:43:04,689 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/jquery-ui-1.10.4/css/jquery.ui.slider.css
2024-04-11 00:43:04,689 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/jquery-ui-1.10.4/jquery-ui.min.js
2024-04-11 00:43:04,689 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/json2.js
2024-04-11 00:43:04,690 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/markdown-browser-0.6.0-beta1/markdown.js
2024-04-11 00:43:04,690 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/markdown-browser-0.6.0-beta1/markdown.min.js
2024-04-11 00:43:04,690 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/mousetrap-1.5.3/mousetrap.min.js
2024-04-11 00:43:04,690 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/raphael-2.1.2/raphael-min.js
2024-04-11 00:43:04,690 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/raphael-2.1.2/raphael.js
2024-04-11 00:43:04,690 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/raphael-2.1.2/scaleraphael.js
2024-04-11 00:43:04,690 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/underscore-1.13.1-umd-min.js
2024-04-11 00:43:04,690 [ scc.git] DEBUG delete mode 100644 omero_figure/templates/figure/index.html
2024-04-11 00:43:04,690 [ scc.git] DEBUG delete mode 100644 spec/ViewportViewSpec.js
2024-04-11 00:43:04,690 [ scc.git] DEBUG delete mode 100644 spec/images/testImage.png
2024-04-11 00:43:04,690 [ scc.git] DEBUG delete mode 100644 spec/javascripts/PanelSpec.js
2024-04-11 00:43:04,690 [ scc.git] DEBUG delete mode 100644 spec/javascripts/ViewportViewSpec.js
2024-04-11 00:43:04,690 [ scc.git] DEBUG delete mode 100644 spec/javascripts/fixtures/previewTab.html
2024-04-11 00:43:04,690 [ scc.git] DEBUG create mode 100644 src/.env
2024-04-11 00:43:04,690 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/css/figure.css (70%)
2024-04-11 00:43:04,690 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/arrow-icon-16.png (100%)
2024-04-11 00:43:04,690 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/button-down-grey.png (100%)
2024-04-11 00:43:04,690 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/button-down.png (100%)
2024-04-11 00:43:04,690 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/button-flat.png (100%)
2024-04-11 00:43:04,690 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/button-up.png (100%)
2024-04-11 00:43:04,690 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/crop20.png (100%)
2024-04-11 00:43:04,691 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/cursor-icon-16.png (100%)
2024-04-11 00:43:04,691 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/ellipse-icon-16.png (100%)
2024-04-11 00:43:04,691 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/gradient.png (100%)
2024-04-11 00:43:04,691 [ scc.git] DEBUG rename omero_figure/static/figure/3rdparty/bootstrap-colorpicker/img/bootstrap-colorpicker/hue-horizontal.png => src/images/hue.png (100%)
2024-04-11 00:43:04,691 [ scc.git] DEBUG mode change 100755 => 100644
2024-04-11 00:43:04,691 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/line-icon-16.png (100%)
2024-04-11 00:43:04,691 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/luts_10.png (100%)
2024-04-11 00:43:04,691 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/markdown_dark32x20.png (100%)
2024-04-11 00:43:04,691 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/markdown_light32x20.png (100%)
2024-04-11 00:43:04,691 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/polygon-icon-16.png (100%)
2024-04-11 00:43:04,691 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/polyline-icon-16.png (100%)
2024-04-11 00:43:04,691 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/projection20.png (100%)
2024-04-11 00:43:04,691 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/square-outline-icon-16.png (100%)
2024-04-11 00:43:04,691 [ scc.git] DEBUG create mode 100644 src/index.html
2024-04-11 00:43:04,691 [ scc.git] DEBUG delete mode 100644 src/js/app.js
2024-04-11 00:43:04,691 [ scc.git] DEBUG create mode 100644 src/js/main.js
2024-04-11 00:43:04,691 [ scc.git] DEBUG create mode 100644 src/js/shapeEditorTest.js
2024-04-11 00:43:04,691 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/ellipse.js
2024-04-11 00:43:04,691 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/line.js
2024-04-11 00:43:04,691 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/polygon.js
2024-04-11 00:43:04,691 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/rect.js
2024-04-11 00:43:04,692 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/shape_manager.js
2024-04-11 00:43:04,692 [ scc.git] DEBUG rename {omero_figure/static/figure/3rdparty/backbone.mousetrap => src/js/views}/backbone.mousetrap.js (76%)
2024-04-11 00:43:04,692 [ scc.git] DEBUG mode change 100755 => 100644
2024-04-11 00:43:04,692 [ scc.git] DEBUG rename omero_figure/static/figure/3rdparty/ome.csrf.js => src/js/views/util.csrf.js (84%)
2024-04-11 00:43:04,692 [ scc.git] DEBUG create mode 100644 src/js/views/zt_sliders_view.js
2024-04-11 00:43:04,692 [ scc.git] DEBUG create mode 100644 src/scss/styles.scss
2024-04-11 00:43:04,692 [ scc.git] DEBUG create mode 100644 src/shapeEditorTest.html
2024-04-11 00:43:04,692 [ scc.git] DEBUG create mode 100644 src/templates/channel_slider.template.html
2024-04-11 00:43:04,692 [ scc.git] DEBUG delete mode 100644 src/templates/channel_slider_template.html
2024-04-11 00:43:04,692 [ scc.git] DEBUG rename src/templates/{figure_panel_template.html => figure_panel.template.html} (77%)
2024-04-11 00:43:04,692 [ scc.git] DEBUG rename src/templates/files/{figure_file_item.html => figure_file_item.template.html} (100%)
2024-04-11 00:43:04,692 [ scc.git] DEBUG rename src/templates/{image_display_options_template.html => image_display_options.template.html} (54%)
2024-04-11 00:43:04,692 [ scc.git] DEBUG rename src/templates/{info_panel_template.html => info_panel.template.html} (90%)
2024-04-11 00:43:04,692 [ scc.git] DEBUG rename src/templates/labels/{label_template.html => label.template.html} (100%)
2024-04-11 00:43:04,692 [ scc.git] DEBUG rename src/templates/labels/{label_right_vertical_template.html => label_right_vertical.template.html} (100%)
2024-04-11 00:43:04,692 [ scc.git] DEBUG rename src/templates/labels/{label_table_template.html => label_table.template.html} (100%)
2024-04-11 00:43:04,692 [ scc.git] DEBUG rename src/templates/labels/{label_vertical_template.html => label_vertical.template.html} (100%)
2024-04-11 00:43:04,692 [ scc.git] DEBUG rename src/templates/{labels_form_template.html => labels_form.template.html} (89%)
2024-04-11 00:43:04,692 [ scc.git] DEBUG create mode 100644 src/templates/labels_form_inner.template.html
2024-04-11 00:43:04,692 [ scc.git] DEBUG delete mode 100644 src/templates/labels_form_inner_template.html
2024-04-11 00:43:04,692 [ scc.git] DEBUG rename src/templates/{lut_picker.html => lut_picker.template.html} (64%)
2024-04-11 00:43:04,692 [ scc.git] DEBUG rename src/templates/modal_dialogs/{crop_modal_roi.html => crop_modal_roi.template.html} (100%)
2024-04-11 00:43:04,693 [ scc.git] DEBUG rename src/templates/modal_dialogs/{paper_setup_modal_template.html => paper_setup_modal.template.html} (54%)
2024-04-11 00:43:04,693 [ scc.git] DEBUG rename src/templates/modal_dialogs/{preview_Id_change_template.html => preview_id_change.template.html} (52%)
2024-04-11 00:43:04,693 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_modal_roi.html => roi_modal_roi.template.html} (94%)
2024-04-11 00:43:04,693 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_modal_shape.html => roi_modal_shape.template.html} (100%)
2024-04-11 00:43:04,693 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_zt_buttons.html => roi_zt_buttons.template.html} (62%)
2024-04-11 00:43:04,693 [ scc.git] DEBUG create mode 100644 src/templates/rois_form.template.html
2024-04-11 00:43:04,693 [ scc.git] DEBUG delete mode 100644 src/templates/rois_form_template.html
2024-04-11 00:43:04,693 [ scc.git] DEBUG create mode 100644 src/templates/scalebar_form.template.html
2024-04-11 00:43:04,693 [ scc.git] DEBUG delete mode 100644 src/templates/scalebar_form_template.html
2024-04-11 00:43:04,693 [ scc.git] DEBUG rename src/templates/{scalebar_panel_template.html => scalebar_panel.template.html} (100%)
2024-04-11 00:43:04,693 [ scc.git] DEBUG rename src/templates/shapes/{shape_toolbar_template.html => shape_toolbar.template.html} (60%)
2024-04-11 00:43:04,693 [ scc.git] DEBUG create mode 100644 src/templates/viewport.template.html
2024-04-11 00:43:04,693 [ scc.git] DEBUG rename src/templates/{viewport_inner_template.html => viewport_inner.template.html} (100%)
2024-04-11 00:43:04,693 [ scc.git] DEBUG delete mode 100644 src/templates/viewport_template.html
2024-04-11 00:43:04,693 [ scc.git] DEBUG rename src/templates/{xywh_panel_template.html => xywh_panel.template.html} (64%)
2024-04-11 00:43:04,693 [ scc.git] DEBUG rename src/templates/{zoom_crop_template.html => zoom_crop.template.html} (54%)
2024-04-11 00:43:04,693 [ scc.git] DEBUG create mode 100644 vite.config.js
2024-04-11 00:43:04,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:43:04,827 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...32b0ccd55ce3c95dabcf8ebf817b032e4b864438'
2024-04-11 00:43:04,837 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:04,842 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 548 (Fix cropping of panel labels and float usage for shape labels) 32b0ccd55ce3c95dabcf8ebf817b032e4b864438'
2024-04-11 00:43:04,876 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-04-11 00:43:04,880 [ scc.git] DEBUG omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py | 6 +++---
2024-04-11 00:43:04,880 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-)
2024-04-11 00:43:05,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:43:05,241 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5c3378fc77523b5998227b3a1b0a8a5b6dfdef74'
2024-04-11 00:43:05,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:05,255 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 550 (Don't update zoom to undefined on setId) 5c3378fc77523b5998227b3a1b0a8a5b6dfdef74'
2024-04-11 00:43:05,283 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js
2024-04-11 00:43:05,284 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-04-11 00:43:05,287 [ scc.git] DEBUG src/js/models/panel_model.js | 1 -
2024-04-11 00:43:05,287 [ scc.git] DEBUG 1 file changed, 1 deletion(-)
2024-04-11 00:43:05,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:43:05,639 [ scc.git] DEBUG Calling 'git submodule update'
2024-04-11 00:43:05,697 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:43:05,697 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:05,704 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-04-11 00:43:05,743 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-04-11 00:43:05,751 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fddac28abe0> has no local changes
2024-04-11 00:43:05,751 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-figure
Excluded PRs:
- PR 549 will-moore 'Inset feature' (stage: draft)
- PR 543 will-moore 'Plate well labels' (stage: draft)
Already up to date.
Merged PRs:
- PR 477 will-moore 'Vite'
- PR 548 will-moore 'Fix cropping of panel labels and float usage for shape labels'
- PR 550 will-moore 'Don't update zoom to undefined on setId'
Generated by OMERO-plugins-push#28 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/)'
2024-04-11 00:43:05,762 [ scc.git] DEBUG [detached HEAD 0d0094ed] merge master -Dorg -Ssuccess-only
2024-04-11 00:43:05,762 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:43:05,762 [ scc.repo] DEBUG ## PRs found:
2024-04-11 00:43:06,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None
2024-04-11 00:43:06,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None
2024-04-11 00:43:07,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None
2024-04-11 00:43:07,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2024-04-11 00:43:08,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-04-11 00:43:08,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2024-04-11 00:43:08,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2
2024-04-11 00:43:08,893 [ scc.repo] DEBUG - PR 18 jburel 'default size z value'
2024-04-11 00:43:08,893 [ scc.repo] DEBUG ## Branches found:
2024-04-11 00:43:08,893 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2024-04-11 00:43:08,894 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:43:08,894 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:08,942 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-04-11 00:43:08,948 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-04-11 00:43:08,948 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-04-11 00:43:08,954 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-04-11 00:43:08,960 [ scc.git] DEBUG Already up to date.
2024-04-11 00:43:08,960 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head'
2024-04-11 00:43:09,387 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2024-04-11 00:43:09,388 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD
2024-04-11 00:43:09,392 [ scc.git] DEBUG ## Unique users: []
2024-04-11 00:43:09,392 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:43:09,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:09,398 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337'
2024-04-11 00:43:09,405 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:09,409 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337'
2024-04-11 00:43:09,446 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py
2024-04-11 00:43:09,447 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-04-11 00:43:09,450 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++
2024-04-11 00:43:09,450 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-04-11 00:43:09,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:43:09,619 [ scc.git] DEBUG Calling 'git submodule update'
2024-04-11 00:43:09,674 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:43:09,674 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:09,680 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-04-11 00:43:09,721 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-04-11 00:43:09,727 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fddac1f7550> has no local changes
2024-04-11 00:43:09,727 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
Generated by OMERO-plugins-push#28 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/)'
2024-04-11 00:43:09,735 [ scc.git] DEBUG [detached HEAD 5107d63] merge master -Dorg -Ssuccess-only
2024-04-11 00:43:09,735 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:43:09,736 [ scc.repo] DEBUG ## PRs found:
2024-04-11 00:43:10,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None
2024-04-11 00:43:10,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None
2024-04-11 00:43:10,610 [ scc.repo] DEBUG # ... Include label: dependencies
2024-04-11 00:43:11,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None
2024-04-11 00:43:11,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-04-11 00:43:12,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-04-11 00:43:12,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None
2024-04-11 00:43:13,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2
2024-04-11 00:43:13,031 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'
2024-04-11 00:43:13,031 [ scc.repo] DEBUG ## Branches found:
2024-04-11 00:43:13,031 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-04-11 00:43:13,031 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:43:13,031 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:13,037 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-04-11 00:43:13,043 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-04-11 00:43:13,043 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-04-11 00:43:13,048 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-04-11 00:43:13,054 [ scc.git] DEBUG Already up to date.
2024-04-11 00:43:13,054 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head'
2024-04-11 00:43:13,461 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-04-11 00:43:13,462 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD
2024-04-11 00:43:13,467 [ scc.git] DEBUG ## Unique users: []
2024-04-11 00:43:13,467 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:43:13,467 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:13,473 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893'
2024-04-11 00:43:13,478 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:13,483 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893'
2024-04-11 00:43:13,494 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-04-11 00:43:13,499 [ scc.git] DEBUG package-lock.json | 18 ++++++------------
2024-04-11 00:43:13,499 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-)
2024-04-11 00:43:13,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:43:13,662 [ scc.git] DEBUG Calling 'git submodule update'
2024-04-11 00:43:13,706 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:43:13,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:13,712 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-04-11 00:43:13,755 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-04-11 00:43:13,764 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fddac1e59d0> has no local changes
2024-04-11 00:43:13,764 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'
Generated by OMERO-plugins-push#28 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/)'
2024-04-11 00:43:13,775 [ scc.git] DEBUG [detached HEAD cc8769d] merge master -Dorg -Ssuccess-only
2024-04-11 00:43:13,776 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:43:13,776 [ scc.repo] DEBUG ## PRs found:
2024-04-11 00:43:14,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None
2024-04-11 00:43:14,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None
2024-04-11 00:43:15,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None
2024-04-11 00:43:15,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/efda99710532f9743896717e88f0e68ca23ec3b2 HTTP/1.1" 200 None
2024-04-11 00:43:16,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/efda99710532f9743896717e88f0e68ca23ec3b2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-04-11 00:43:16,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/efda99710532f9743896717e88f0e68ca23ec3b2/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-04-11 00:43:17,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/efda99710532f9743896717e88f0e68ca23ec3b2 HTTP/1.1" 200 None
2024-04-11 00:43:17,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/efda99710532f9743896717e88f0e68ca23ec3b2?per_page=1 HTTP/1.1" 200 2
2024-04-11 00:43:17,473 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure'
2024-04-11 00:43:17,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/464 HTTP/1.1" 200 None
2024-04-11 00:43:18,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/464/comments HTTP/1.1" 200 None
2024-04-11 00:43:18,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/97542d9b749f93d4902f7dce703bbf2a04316a98 HTTP/1.1" 200 None
2024-04-11 00:43:19,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/97542d9b749f93d4902f7dce703bbf2a04316a98/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-04-11 00:43:19,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/97542d9b749f93d4902f7dce703bbf2a04316a98/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-04-11 00:43:20,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/97542d9b749f93d4902f7dce703bbf2a04316a98 HTTP/1.1" 200 None
2024-04-11 00:43:20,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/97542d9b749f93d4902f7dce703bbf2a04316a98?per_page=1 HTTP/1.1" 200 2
2024-04-11 00:43:20,795 [ scc.repo] DEBUG - PR 464 will-moore 'Tile load error warning'
2024-04-11 00:43:21,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None
2024-04-11 00:43:21,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None
2024-04-11 00:43:22,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-04-11 00:43:22,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-04-11 00:43:23,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-04-11 00:43:23,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2
2024-04-11 00:43:23,523 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix'
2024-04-11 00:43:23,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/456 HTTP/1.1" 200 None
2024-04-11 00:43:24,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/456/comments HTTP/1.1" 200 None
2024-04-11 00:43:24,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745 HTTP/1.1" 200 None
2024-04-11 00:43:25,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-04-11 00:43:25,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-04-11 00:43:26,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745 HTTP/1.1" 200 None
2024-04-11 00:43:26,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745?per_page=1 HTTP/1.1" 200 2
2024-04-11 00:43:26,819 [ scc.repo] DEBUG - PR 456 will-moore 'Don't use tiles for non-big movies'
2024-04-11 00:43:26,819 [ scc.repo] DEBUG ## Branches found:
2024-04-11 00:43:26,820 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-04-11 00:43:26,820 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:43:26,820 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:26,826 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-04-11 00:43:26,831 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-04-11 00:43:26,832 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-04-11 00:43:26,837 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-04-11 00:43:26,862 [ scc.git] DEBUG Updating a232ed0..9d8d147
2024-04-11 00:43:27,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/468 HTTP/1.1" 200 None
2024-04-11 00:43:27,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/467 HTTP/1.1" 200 None
2024-04-11 00:43:27,939 [ scc.git] DEBUG Calling 'git fetch origin pull/456/head'
2024-04-11 00:43:28,458 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-04-11 00:43:28,458 [ scc.git] DEBUG * branch refs/pull/456/head -> FETCH_HEAD
2024-04-11 00:43:28,464 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head'
2024-04-11 00:43:28,883 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-04-11 00:43:28,884 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD
2024-04-11 00:43:28,890 [ scc.git] DEBUG Calling 'git fetch origin pull/464/head'
2024-04-11 00:43:29,404 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-04-11 00:43:29,404 [ scc.git] DEBUG * branch refs/pull/464/head -> FETCH_HEAD
2024-04-11 00:43:29,409 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head'
2024-04-11 00:43:30,223 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-04-11 00:43:30,223 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD
2024-04-11 00:43:30,230 [ scc.git] DEBUG ## Unique users: []
2024-04-11 00:43:30,230 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:43:30,230 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:30,237 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2954dd294c5d9f89b64ca4cedcc76dd0c9a32745'
2024-04-11 00:43:30,243 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:30,249 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 456 (Don't use tiles for non-big movies) 2954dd294c5d9f89b64ca4cedcc76dd0c9a32745'
2024-04-11 00:43:30,289 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-04-11 00:43:30,292 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 5 +++--
2024-04-11 00:43:30,292 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 2 deletions(-)
2024-04-11 00:43:30,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:43:30,463 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-04-11 00:43:30,472 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:30,478 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-04-11 00:43:30,491 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-04-11 00:43:30,495 [ scc.git] DEBUG src/model/image_info.js | 7 ++++---
2024-04-11 00:43:30,495 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++-
2024-04-11 00:43:30,495 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-)
2024-04-11 00:43:30,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:43:30,875 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...97542d9b749f93d4902f7dce703bbf2a04316a98'
2024-04-11 00:43:30,882 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:30,889 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 464 (Tile load error warning) 97542d9b749f93d4902f7dce703bbf2a04316a98'
2024-04-11 00:43:30,907 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-04-11 00:43:30,913 [ scc.git] DEBUG css/app.css | 22 ++++++++++++++++++++++
2024-04-11 00:43:30,913 [ scc.git] DEBUG src/events/events.js | 2 ++
2024-04-11 00:43:30,913 [ scc.git] DEBUG src/index-dev.html | 6 +++---
2024-04-11 00:43:30,913 [ scc.git] DEBUG src/viewers/ol3-viewer.html | 2 +-
2024-04-11 00:43:30,913 [ scc.git] DEBUG src/viewers/ol3-viewer.js | 4 +++-
2024-04-11 00:43:30,913 [ scc.git] DEBUG src/viewers/viewer/Viewer.js | 39 +++++++++++++++++++++++++++++++++++++--
2024-04-11 00:43:30,913 [ scc.git] DEBUG 6 files changed, 68 insertions(+), 7 deletions(-)
2024-04-11 00:43:31,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:43:31,278 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...efda99710532f9743896717e88f0e68ca23ec3b2'
2024-04-11 00:43:31,286 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:31,293 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) efda99710532f9743896717e88f0e68ca23ec3b2'
2024-04-11 00:43:31,374 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js
2024-04-11 00:43:31,374 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-04-11 00:43:31,379 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++-
2024-04-11 00:43:31,379 [ scc.git] DEBUG src/app/context.js | 6 +-
2024-04-11 00:43:31,379 [ scc.git] DEBUG src/app/header.html | 5 +
2024-04-11 00:43:31,379 [ scc.git] DEBUG src/app/header.js | 46 ++++++++-
2024-04-11 00:43:31,379 [ scc.git] DEBUG src/utils/constants.js | 6 ++
2024-04-11 00:43:31,379 [ scc.git] DEBUG src/utils/figure.js | 210 ++++++++++++++++++++++++++++++++++++++++++
2024-04-11 00:43:31,379 [ scc.git] DEBUG 6 files changed, 284 insertions(+), 6 deletions(-)
2024-04-11 00:43:31,379 [ scc.git] DEBUG create mode 100644 src/utils/figure.js
2024-04-11 00:43:31,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:43:31,709 [ scc.git] DEBUG Calling 'git submodule update'
2024-04-11 00:43:31,755 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:43:31,755 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:31,762 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-04-11 00:43:31,804 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-04-11 00:43:31,812 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fddac19e5b0> has no local changes
2024-04-11 00:43:31,812 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-iviewer
Excluded PRs:
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Updating a232ed0..9d8d147
Previously merged:
- PR 468 dependabot[bot] 'Bump express from 4.18.2 to 4.19.2'
- PR 467 dependabot[bot] 'Bump webpack-dev-middleware from 5.3.3 to 5.3.4'
Merged PRs:
- PR 456 will-moore 'Don't use tiles for non-big movies'
- PR 460 will-moore 'Channel min spinner fix'
- PR 464 will-moore 'Tile load error warning'
- PR 465 will-moore 'Save as Figure'
Generated by OMERO-plugins-push#28 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/)'
2024-04-11 00:43:31,824 [ scc.git] DEBUG [detached HEAD af12e55] merge master -Dorg -Ssuccess-only
2024-04-11 00:43:31,824 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:43:31,824 [ scc.repo] DEBUG ## PRs found:
2024-04-11 00:43:32,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2024-04-11 00:43:32,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2024-04-11 00:43:33,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2024-04-11 00:43:33,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-04-11 00:43:34,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-04-11 00:43:34,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-04-11 00:43:35,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-04-11 00:43:35,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2024-04-11 00:43:35,618 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2024-04-11 00:43:35,618 [ scc.repo] DEBUG ## Branches found:
2024-04-11 00:43:35,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-04-11 00:43:35,619 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:43:35,619 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:35,629 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-04-11 00:43:35,638 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-04-11 00:43:35,639 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-04-11 00:43:35,647 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-04-11 00:43:35,655 [ scc.git] DEBUG Already up to date.
2024-04-11 00:43:35,655 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2024-04-11 00:43:36,052 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2024-04-11 00:43:36,053 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2024-04-11 00:43:36,058 [ scc.git] DEBUG ## Unique users: []
2024-04-11 00:43:36,058 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:43:36,058 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:36,064 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-04-11 00:43:36,070 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:36,074 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-04-11 00:43:36,084 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-04-11 00:43:36,087 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2024-04-11 00:43:36,087 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2024-04-11 00:43:36,087 [ scc.git] DEBUG requirements.txt | 2 +-
2024-04-11 00:43:36,087 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2024-04-11 00:43:36,087 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2024-04-11 00:43:36,087 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2024-04-11 00:43:36,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:43:36,258 [ scc.git] DEBUG Calling 'git submodule update'
2024-04-11 00:43:36,301 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:43:36,302 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:36,309 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-04-11 00:43:36,368 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-04-11 00:43:36,376 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fddac2404f0> has no local changes
2024-04-11 00:43:36,377 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
Generated by OMERO-plugins-push#28 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/)'
2024-04-11 00:43:36,387 [ scc.git] DEBUG [detached HEAD 38a3cf8] merge master -Dorg -Ssuccess-only
2024-04-11 00:43:36,387 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:43:36,388 [ scc.repo] DEBUG ## PRs found:
2024-04-11 00:43:36,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2024-04-11 00:43:37,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2024-04-11 00:43:37,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2024-04-11 00:43:38,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-04-11 00:43:38,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-04-11 00:43:39,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-04-11 00:43:39,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2024-04-11 00:43:39,717 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-04-11 00:43:40,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2024-04-11 00:43:40,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2024-04-11 00:43:41,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-04-11 00:43:41,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-04-11 00:43:42,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-04-11 00:43:42,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2024-04-11 00:43:42,484 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-04-11 00:43:42,484 [ scc.repo] DEBUG ## Branches found:
2024-04-11 00:43:42,484 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-04-11 00:43:42,485 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:43:42,485 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:42,493 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-04-11 00:43:42,500 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-04-11 00:43:42,501 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-04-11 00:43:42,510 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-04-11 00:43:42,518 [ scc.git] DEBUG Already up to date.
2024-04-11 00:43:42,518 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2024-04-11 00:43:43,025 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-04-11 00:43:43,025 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2024-04-11 00:43:43,030 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2024-04-11 00:43:43,570 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-04-11 00:43:43,570 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2024-04-11 00:43:43,575 [ scc.git] DEBUG ## Unique users: []
2024-04-11 00:43:43,575 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:43:43,575 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:43,582 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-04-11 00:43:43,590 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:43,595 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-04-11 00:43:43,651 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2024-04-11 00:43:43,652 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2024-04-11 00:43:43,652 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-04-11 00:43:43,652 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-04-11 00:43:43,652 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-04-11 00:43:43,653 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-04-11 00:43:43,659 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-04-11 00:43:43,667 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging
2024-04-11 00:43:43,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:43:43,829 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-04-11 00:43:43,837 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-04-11 00:43:43,843 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#28](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/cli.py
- src/omero_metadata/populate.py
--conflicts
2024-04-11 00:43:43,848 [ scc.config] DEBUG Found github.token
2024-04-11 00:43:43,848 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2024-04-11 00:43:43,848 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2024-04-11 00:43:43,856 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:43,862 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2024-04-11 00:43:43,914 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-04-11 00:43:43,914 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-04-11 00:43:43,914 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2024-04-11 00:43:43,914 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-04-11 00:43:43,915 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-04-11 00:43:43,922 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-04-11 00:43:43,930 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging
2024-04-11 00:43:44,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:43:44,238 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7'
2024-04-11 00:43:44,253 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-04-11 00:43:44,268 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#28](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2024-04-11 00:43:44,281 [ scc.config] DEBUG Found github.token
2024-04-11 00:43:44,281 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2024-04-11 00:43:44,281 [ scc.git] DEBUG Calling 'git submodule update'
2024-04-11 00:43:44,334 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:43:44,334 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:44,341 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-04-11 00:43:44,383 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-04-11 00:43:44,394 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fddac19e550> has no local changes
2024-04-11 00:43:44,394 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Already up to date.
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#28 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/)'
2024-04-11 00:43:44,403 [ scc.git] DEBUG [detached HEAD 32ea6cf] merge master -Dorg -Ssuccess-only
2024-04-11 00:43:44,403 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:43:44,403 [ scc.repo] DEBUG ## PRs found:
2024-04-11 00:43:44,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2024-04-11 00:43:45,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None
2024-04-11 00:43:45,253 [ scc.repo] DEBUG # ... Include label: dependencies
2024-04-11 00:43:45,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None
2024-04-11 00:43:46,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-04-11 00:43:46,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-04-11 00:43:47,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None
2024-04-11 00:43:47,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2
2024-04-11 00:43:47,682 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
2024-04-11 00:43:48,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None
2024-04-11 00:43:48,141 [ scc.repo] DEBUG # ... Include label: dependencies
2024-04-11 00:43:48,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None
2024-04-11 00:43:49,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-04-11 00:43:49,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-04-11 00:43:50,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None
2024-04-11 00:43:50,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2
2024-04-11 00:43:50,665 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
2024-04-11 00:43:51,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None
2024-04-11 00:43:51,145 [ scc.repo] DEBUG # ... Include label: dependencies
2024-04-11 00:43:51,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None
2024-04-11 00:43:52,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-04-11 00:43:52,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-04-11 00:43:53,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None
2024-04-11 00:43:53,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2
2024-04-11 00:43:53,612 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
2024-04-11 00:43:54,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2024-04-11 00:43:54,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2024-04-11 00:43:55,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2024-04-11 00:43:55,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2024-04-11 00:43:55,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2024-04-11 00:43:56,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2024-04-11 00:43:56,487 [ scc.repo] DEBUG ## Branches found:
2024-04-11 00:43:56,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-04-11 00:43:56,487 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:43:56,487 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:56,529 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-04-11 00:43:56,536 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-04-11 00:43:56,536 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-04-11 00:43:56,542 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-04-11 00:43:56,549 [ scc.git] DEBUG Already up to date.
2024-04-11 00:43:56,550 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head'
2024-04-11 00:43:56,928 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2024-04-11 00:43:56,929 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD
2024-04-11 00:43:56,933 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head'
2024-04-11 00:43:57,329 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2024-04-11 00:43:57,329 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD
2024-04-11 00:43:57,336 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head'
2024-04-11 00:43:57,743 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2024-04-11 00:43:57,743 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD
2024-04-11 00:43:57,749 [ scc.git] DEBUG ## Unique users: []
2024-04-11 00:43:57,749 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:43:57,749 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:57,756 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680'
2024-04-11 00:43:57,762 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:57,768 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680'
2024-04-11 00:43:57,783 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-04-11 00:43:57,786 [ scc.git] DEBUG package-lock.json | 12 ++++++++----
2024-04-11 00:43:57,787 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-)
2024-04-11 00:43:57,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:43:57,952 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec'
2024-04-11 00:43:57,959 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:57,964 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec'
2024-04-11 00:43:58,041 [ scc.git] DEBUG Auto-merging package-lock.json
2024-04-11 00:43:58,042 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-04-11 00:43:58,045 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++---------------------------
2024-04-11 00:43:58,045 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-)
2024-04-11 00:43:58,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:43:58,360 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f'
2024-04-11 00:43:58,366 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:58,373 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f'
2024-04-11 00:43:58,406 [ scc.git] DEBUG Auto-merging package-lock.json
2024-04-11 00:43:58,407 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-04-11 00:43:58,411 [ scc.git] DEBUG package-lock.json | 8 ++++----
2024-04-11 00:43:58,411 [ scc.git] DEBUG package.json | 2 +-
2024-04-11 00:43:58,411 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-)
2024-04-11 00:43:58,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:43:58,777 [ scc.git] DEBUG Calling 'git submodule update'
2024-04-11 00:43:58,820 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:43:58,821 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:43:58,827 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-04-11 00:43:58,876 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-04-11 00:43:58,884 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fddac1d8fd0> has no local changes
2024-04-11 00:43:58,884 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
- PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
- PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
Generated by OMERO-plugins-push#28 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/)'
2024-04-11 00:43:58,894 [ scc.git] DEBUG [detached HEAD cf640ba] merge master -Dorg -Ssuccess-only
2024-04-11 00:43:58,894 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:43:58,895 [ scc.repo] DEBUG ## PRs found:
2024-04-11 00:43:59,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None
2024-04-11 00:43:59,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None
2024-04-11 00:44:00,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-04-11 00:44:00,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-04-11 00:44:01,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-04-11 00:44:01,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2
2024-04-11 00:44:01,669 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel'
2024-04-11 00:44:01,670 [ scc.repo] DEBUG ## Branches found:
2024-04-11 00:44:01,670 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-04-11 00:44:01,670 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:01,670 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:01,677 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-04-11 00:44:01,683 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-04-11 00:44:01,683 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-04-11 00:44:01,689 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-04-11 00:44:01,697 [ scc.git] DEBUG Already up to date.
2024-04-11 00:44:01,697 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-04-11 00:44:02,091 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools
2024-04-11 00:44:02,092 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2024-04-11 00:44:02,097 [ scc.git] DEBUG ## Unique users: []
2024-04-11 00:44:02,097 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:02,098 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:02,103 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-04-11 00:44:02,109 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:02,115 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-04-11 00:44:02,125 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-04-11 00:44:02,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:02,297 [ scc.git] DEBUG Calling 'git submodule update'
2024-04-11 00:44:02,338 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:02,339 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:02,345 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-04-11 00:44:02,395 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-04-11 00:44:02,402 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fddac169340> has no local changes
2024-04-11 00:44:02,402 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 14 jburel 'use conda-forge channel'
Generated by OMERO-plugins-push#28 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/)'
2024-04-11 00:44:02,411 [ scc.git] DEBUG [detached HEAD 93deaf8] merge master -Dorg -Ssuccess-only
2024-04-11 00:44:02,411 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:02,411 [ scc.repo] DEBUG ## PRs found:
2024-04-11 00:44:02,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2024-04-11 00:44:03,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None
2024-04-11 00:44:03,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None
2024-04-11 00:44:04,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None
2024-04-11 00:44:04,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-04-11 00:44:05,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-04-11 00:44:05,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-04-11 00:44:06,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2
2024-04-11 00:44:06,076 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-04-11 00:44:06,076 [ scc.repo] DEBUG ## Branches found:
2024-04-11 00:44:06,076 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-04-11 00:44:06,076 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:06,076 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:06,083 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-04-11 00:44:06,090 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-04-11 00:44:06,091 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-04-11 00:44:06,098 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-04-11 00:44:06,105 [ scc.git] DEBUG Already up to date.
2024-04-11 00:44:06,105 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head'
2024-04-11 00:44:06,653 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2024-04-11 00:44:06,653 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD
2024-04-11 00:44:06,659 [ scc.git] DEBUG ## Unique users: []
2024-04-11 00:44:06,660 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:06,660 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:06,667 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61'
2024-04-11 00:44:06,674 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:06,679 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61'
2024-04-11 00:44:06,691 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py
2024-04-11 00:44:06,691 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-04-11 00:44:06,694 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++
2024-04-11 00:44:06,694 [ scc.git] DEBUG 1 file changed, 33 insertions(+)
2024-04-11 00:44:06,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:06,856 [ scc.git] DEBUG Calling 'git submodule update'
2024-04-11 00:44:06,899 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:06,899 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:06,905 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-04-11 00:44:06,950 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-04-11 00:44:06,956 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fddac1975b0> has no local changes
2024-04-11 00:44:06,957 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 6 dominikl 'Add method to create masks grouped by label id'
Generated by OMERO-plugins-push#28 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/)'
2024-04-11 00:44:06,966 [ scc.git] DEBUG [detached HEAD 0b56865] merge master -Dorg -Ssuccess-only
2024-04-11 00:44:06,966 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:06,967 [ scc.repo] DEBUG ## PRs found:
2024-04-11 00:44:07,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2024-04-11 00:44:07,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2024-04-11 00:44:08,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2024-04-11 00:44:08,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-04-11 00:44:09,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-04-11 00:44:09,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-04-11 00:44:10,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2024-04-11 00:44:10,147 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2024-04-11 00:44:10,147 [ scc.repo] DEBUG ## Branches found:
2024-04-11 00:44:10,147 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-04-11 00:44:10,147 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:10,147 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:10,153 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-04-11 00:44:10,159 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-04-11 00:44:10,160 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-04-11 00:44:10,166 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-04-11 00:44:10,173 [ scc.git] DEBUG Already up to date.
2024-04-11 00:44:10,173 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-04-11 00:44:10,626 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2024-04-11 00:44:10,626 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2024-04-11 00:44:10,632 [ scc.git] DEBUG ## Unique users: []
2024-04-11 00:44:10,632 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:10,632 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:10,638 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-04-11 00:44:10,644 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:10,650 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-04-11 00:44:10,743 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2024-04-11 00:44:10,744 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2024-04-11 00:44:10,744 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2024-04-11 00:44:10,744 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2024-04-11 00:44:10,744 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2024-04-11 00:44:10,744 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2024-04-11 00:44:10,744 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-04-11 00:44:10,744 [ scc.git] DEBUG Auto-merging setup.py
2024-04-11 00:44:10,744 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2024-04-11 00:44:10,745 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-04-11 00:44:10,752 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319'
2024-04-11 00:44:10,765 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0
2024-04-11 00:44:10,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:10,930 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-04-11 00:44:10,938 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319'
2024-04-11 00:44:10,950 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#28](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_signup/views.py
- setup.py
- omero_signup/urls.py
- omero_signup/signup_settings.py
--conflicts
2024-04-11 00:44:10,958 [ scc.config] DEBUG Found github.token
2024-04-11 00:44:10,959 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2024-04-11 00:44:10,959 [ scc.git] DEBUG Calling 'git submodule update'
2024-04-11 00:44:11,006 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:11,007 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:11,013 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-04-11 00:44:11,052 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-04-11 00:44:11,059 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fddac1e5e80> has no local changes
2024-04-11 00:44:11,059 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#28 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/)'
2024-04-11 00:44:11,069 [ scc.git] DEBUG [detached HEAD 08bd6f2] merge master -Dorg -Ssuccess-only
2024-04-11 00:44:11,069 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:11,069 [ scc.repo] DEBUG ## PRs found:
2024-04-11 00:44:11,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2024-04-11 00:44:11,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2024-04-11 00:44:12,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2024-04-11 00:44:12,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-04-11 00:44:13,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-04-11 00:44:13,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-04-11 00:44:14,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2024-04-11 00:44:14,192 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-04-11 00:44:14,192 [ scc.repo] DEBUG ## Branches found:
2024-04-11 00:44:14,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-04-11 00:44:14,193 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:14,193 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:14,203 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-04-11 00:44:14,211 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-04-11 00:44:14,212 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-04-11 00:44:14,220 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-04-11 00:44:14,229 [ scc.git] DEBUG Already up to date.
2024-04-11 00:44:14,230 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2024-04-11 00:44:14,693 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2024-04-11 00:44:14,693 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD
2024-04-11 00:44:14,699 [ scc.git] DEBUG ## Unique users: []
2024-04-11 00:44:14,699 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:14,700 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:14,708 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2024-04-11 00:44:14,717 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:14,727 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2024-04-11 00:44:14,766 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-04-11 00:44:14,770 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++
2024-04-11 00:44:14,771 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++
2024-04-11 00:44:14,771 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++
2024-04-11 00:44:14,771 [ scc.git] DEBUG idr/70-reset-password.sh | 1 +
2024-04-11 00:44:14,771 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 +
2024-04-11 00:44:14,771 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 +
2024-04-11 00:44:14,771 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++
2024-04-11 00:44:14,771 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++
2024-04-11 00:44:14,771 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++
2024-04-11 00:44:14,771 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2024-04-11 00:44:14,771 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++
2024-04-11 00:44:14,771 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++
2024-04-11 00:44:14,771 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++
2024-04-11 00:44:14,771 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++
2024-04-11 00:44:14,771 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++
2024-04-11 00:44:14,771 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++
2024-04-11 00:44:14,771 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++
2024-04-11 00:44:14,773 [ scc.git] DEBUG idr/omero/Dockerfile | 3 +
2024-04-11 00:44:14,773 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++
2024-04-11 00:44:14,773 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++
2024-04-11 00:44:14,774 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++
2024-04-11 00:44:14,774 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++
2024-04-11 00:44:14,774 [ scc.git] DEBUG 22 files changed, 824 insertions(+)
2024-04-11 00:44:14,775 [ scc.git] DEBUG create mode 100644 idr-compose.yml
2024-04-11 00:44:14,775 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml
2024-04-11 00:44:14,775 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh
2024-04-11 00:44:14,775 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh
2024-04-11 00:44:14,775 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf
2024-04-11 00:44:14,775 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf
2024-04-11 00:44:14,775 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2024-04-11 00:44:14,775 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2024-04-11 00:44:14,775 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf
2024-04-11 00:44:14,775 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2024-04-11 00:44:14,775 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2024-04-11 00:44:14,775 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2024-04-11 00:44:14,776 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2024-04-11 00:44:14,776 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2024-04-11 00:44:14,776 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2024-04-11 00:44:14,776 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2024-04-11 00:44:14,776 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf
2024-04-11 00:44:14,776 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile
2024-04-11 00:44:14,776 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml
2024-04-11 00:44:14,776 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile
2024-04-11 00:44:14,776 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile
2024-04-11 00:44:14,776 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml
2024-04-11 00:44:14,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:14,952 [ scc.git] DEBUG Calling 'git submodule update'
2024-04-11 00:44:14,995 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:14,995 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:15,002 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-04-11 00:44:15,043 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-04-11 00:44:15,050 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fddac1d8df0> has no local changes
2024-04-11 00:44:15,051 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
Generated by OMERO-plugins-push#28 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/)'
2024-04-11 00:44:15,060 [ scc.git] DEBUG [detached HEAD df20015] merge master -Dorg -Ssuccess-only
2024-04-11 00:44:15,061 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:15,061 [ scc.repo] DEBUG ## PRs found:
2024-04-11 00:44:15,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2
2024-04-11 00:44:15,385 [ scc.repo] DEBUG ## Branches found:
2024-04-11 00:44:15,385 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-04-11 00:44:15,385 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:15,385 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:15,394 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-04-11 00:44:15,401 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-04-11 00:44:15,402 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-04-11 00:44:15,410 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-04-11 00:44:15,421 [ scc.git] DEBUG Already up to date.
2024-04-11 00:44:15,421 [ scc.git] DEBUG ## Unique users: []
2024-04-11 00:44:15,421 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:15,421 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:15,432 [ scc.git] DEBUG Calling 'git submodule update'
2024-04-11 00:44:15,485 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:15,485 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:15,493 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-04-11 00:44:15,546 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-04-11 00:44:15,554 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fddac1d0fa0> has no local changes
2024-04-11 00:44:15,555 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Already up to date.
Generated by OMERO-plugins-push#28 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/)'
2024-04-11 00:44:15,566 [ scc.git] DEBUG [detached HEAD 58b3d35] merge master -Dorg -Ssuccess-only
2024-04-11 00:44:15,566 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:15,566 [ scc.repo] DEBUG ## PRs found:
2024-04-11 00:44:15,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2
2024-04-11 00:44:15,830 [ scc.repo] DEBUG ## Branches found:
2024-04-11 00:44:15,830 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-04-11 00:44:15,830 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:15,830 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:15,839 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-04-11 00:44:15,847 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-04-11 00:44:15,847 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-04-11 00:44:15,855 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-04-11 00:44:15,863 [ scc.git] DEBUG Already up to date.
2024-04-11 00:44:15,863 [ scc.git] DEBUG ## Unique users: []
2024-04-11 00:44:15,863 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:15,863 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:15,870 [ scc.git] DEBUG Calling 'git submodule update'
2024-04-11 00:44:15,925 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:15,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:15,934 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-04-11 00:44:15,993 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-04-11 00:44:16,004 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fddac18ccd0> has no local changes
2024-04-11 00:44:16,005 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Already up to date.
Generated by OMERO-plugins-push#28 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/)'
2024-04-11 00:44:16,018 [ scc.git] DEBUG [detached HEAD 00b9358] merge master -Dorg -Ssuccess-only
2024-04-11 00:44:16,019 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:16,019 [ scc.git] INFO Overriding base-branch from master to main
2024-04-11 00:44:16,019 [ scc.repo] DEBUG ## PRs found:
2024-04-11 00:44:16,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2024-04-11 00:44:16,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2024-04-11 00:44:17,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2024-04-11 00:44:17,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2024-04-11 00:44:18,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-04-11 00:44:18,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-04-11 00:44:19,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-04-11 00:44:19,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-04-11 00:44:20,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2024-04-11 00:44:20,166 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-04-11 00:44:20,166 [ scc.repo] DEBUG ## Branches found:
2024-04-11 00:44:20,167 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-04-11 00:44:20,167 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:20,167 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:20,173 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2024-04-11 00:44:20,178 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-04-11 00:44:20,179 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2024-04-11 00:44:20,185 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2024-04-11 00:44:20,191 [ scc.git] DEBUG Already up to date.
2024-04-11 00:44:20,192 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2024-04-11 00:44:20,629 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2024-04-11 00:44:20,629 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2024-04-11 00:44:20,634 [ scc.git] DEBUG ## Unique users: []
2024-04-11 00:44:20,634 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:20,634 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:20,640 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-04-11 00:44:20,647 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:20,653 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-04-11 00:44:20,675 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2024-04-11 00:44:20,675 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2024-04-11 00:44:20,675 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-04-11 00:44:20,675 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-04-11 00:44:20,682 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-04-11 00:44:20,690 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0
2024-04-11 00:44:20,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:20,854 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-04-11 00:44:20,861 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-04-11 00:44:20,868 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#28](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2024-04-11 00:44:20,874 [ scc.config] DEBUG Found github.token
2024-04-11 00:44:20,875 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2024-04-11 00:44:20,875 [ scc.git] DEBUG Calling 'git submodule update'
2024-04-11 00:44:20,919 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:20,919 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:20,926 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-04-11 00:44:20,973 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-04-11 00:44:20,981 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fddac160430> has no local changes
2024-04-11 00:44:20,982 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#28 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/)'
2024-04-11 00:44:20,993 [ scc.git] DEBUG [detached HEAD ecb27de] merge master -Dorg -Ssuccess-only
2024-04-11 00:44:20,994 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:20,994 [ scc.repo] DEBUG ## PRs found:
2024-04-11 00:44:21,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2
2024-04-11 00:44:21,295 [ scc.repo] DEBUG ## Branches found:
2024-04-11 00:44:21,295 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-04-11 00:44:21,295 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:21,295 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:21,301 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-04-11 00:44:21,307 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-04-11 00:44:21,307 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-04-11 00:44:21,314 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-04-11 00:44:21,320 [ scc.git] DEBUG Already up to date.
2024-04-11 00:44:21,321 [ scc.git] DEBUG ## Unique users: []
2024-04-11 00:44:21,321 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:21,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:21,326 [ scc.git] DEBUG Calling 'git submodule update'
2024-04-11 00:44:21,371 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:21,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:21,377 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-04-11 00:44:21,419 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-04-11 00:44:21,426 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fddac18bc10> has no local changes
2024-04-11 00:44:21,426 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Already up to date.
Generated by OMERO-plugins-push#28 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/)'
2024-04-11 00:44:21,436 [ scc.git] DEBUG [detached HEAD b110d58] merge master -Dorg -Ssuccess-only
2024-04-11 00:44:21,436 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:21,437 [ scc.repo] DEBUG ## PRs found:
2024-04-11 00:44:21,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2
2024-04-11 00:44:21,720 [ scc.repo] DEBUG ## Branches found:
2024-04-11 00:44:21,720 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-04-11 00:44:21,721 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:21,721 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:21,726 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-04-11 00:44:21,732 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-04-11 00:44:21,732 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-04-11 00:44:21,738 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-04-11 00:44:21,744 [ scc.git] DEBUG Already up to date.
2024-04-11 00:44:21,744 [ scc.git] DEBUG ## Unique users: []
2024-04-11 00:44:21,744 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:21,745 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:21,750 [ scc.git] DEBUG Calling 'git submodule update'
2024-04-11 00:44:21,792 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:21,793 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:21,799 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-04-11 00:44:21,840 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-04-11 00:44:21,848 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fddac0f7280> has no local changes
2024-04-11 00:44:21,849 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Already up to date.
Generated by OMERO-plugins-push#28 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/)'
2024-04-11 00:44:21,860 [ scc.git] DEBUG [detached HEAD 6cad62b] merge master -Dorg -Ssuccess-only
2024-04-11 00:44:21,860 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:21,861 [ scc.repo] DEBUG ## PRs found:
2024-04-11 00:44:22,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2024-04-11 00:44:22,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2024-04-11 00:44:23,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2024-04-11 00:44:23,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-04-11 00:44:24,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-04-11 00:44:24,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-04-11 00:44:25,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2024-04-11 00:44:25,119 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2024-04-11 00:44:25,119 [ scc.repo] DEBUG ## Branches found:
2024-04-11 00:44:25,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-04-11 00:44:25,120 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:25,120 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:25,126 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-04-11 00:44:25,132 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-04-11 00:44:25,132 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-04-11 00:44:25,139 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-04-11 00:44:25,146 [ scc.git] DEBUG Already up to date.
2024-04-11 00:44:25,146 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2024-04-11 00:44:25,583 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2024-04-11 00:44:25,583 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2024-04-11 00:44:25,590 [ scc.git] DEBUG ## Unique users: []
2024-04-11 00:44:25,590 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:25,590 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:25,596 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-04-11 00:44:25,604 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:25,610 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-04-11 00:44:25,633 [ scc.git] DEBUG Auto-merging Dockerfile
2024-04-11 00:44:25,634 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2024-04-11 00:44:25,634 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-04-11 00:44:25,634 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-04-11 00:44:25,641 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-04-11 00:44:25,651 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2024-04-11 00:44:25,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:25,847 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-04-11 00:44:25,856 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-04-11 00:44:25,863 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#28](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2024-04-11 00:44:25,870 [ scc.config] DEBUG Found github.token
2024-04-11 00:44:25,871 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2024-04-11 00:44:25,871 [ scc.git] DEBUG Calling 'git submodule update'
2024-04-11 00:44:25,912 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:25,912 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:25,918 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-04-11 00:44:25,960 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-04-11 00:44:25,968 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fddac0febe0> has no local changes
2024-04-11 00:44:25,968 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#28 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/)'
2024-04-11 00:44:25,978 [ scc.git] DEBUG [detached HEAD 177b357] merge master -Dorg -Ssuccess-only
2024-04-11 00:44:25,979 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:25,979 [ scc.git] INFO Overriding base-branch from master to develop
2024-04-11 00:44:25,979 [ scc.repo] DEBUG ## PRs found:
2024-04-11 00:44:26,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-04-11 00:44:26,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-04-11 00:44:27,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-04-11 00:44:27,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-04-11 00:44:28,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-04-11 00:44:28,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-04-11 00:44:29,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-04-11 00:44:29,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-04-11 00:44:30,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-04-11 00:44:30,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-04-11 00:44:31,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-04-11 00:44:31,179 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-04-11 00:44:31,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-04-11 00:44:32,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-04-11 00:44:32,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-04-11 00:44:33,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-04-11 00:44:33,175 [ scc.repo] DEBUG ## Branches found:
2024-04-11 00:44:33,175 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-04-11 00:44:33,175 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:33,175 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:33,182 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-04-11 00:44:33,189 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-04-11 00:44:33,190 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-04-11 00:44:33,197 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-04-11 00:44:33,204 [ scc.git] DEBUG Already up to date.
2024-04-11 00:44:33,204 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-04-11 00:44:33,622 [ scc.git] DEBUG From https://github.com/ome/scripts
2024-04-11 00:44:33,623 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-04-11 00:44:33,628 [ scc.git] DEBUG ## Unique users: []
2024-04-11 00:44:33,628 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:33,629 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:33,637 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-04-11 00:44:33,647 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:33,655 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-04-11 00:44:33,699 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-04-11 00:44:33,700 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-04-11 00:44:33,700 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-04-11 00:44:33,700 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-04-11 00:44:33,708 [ scc.git] DEBUG Calling 'git reset --hard 2078ac72dbf11f2733e685000a274eff81c2ac2d'
2024-04-11 00:44:33,716 [ scc.git] DEBUG HEAD is now at 2078ac7 Bump version: 5.8.0 → 5.8.1.dev0
2024-04-11 00:44:33,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:33,889 [ scc.git] DEBUG Calling 'git merge-base 2078ac72dbf11f2733e685000a274eff81c2ac2d 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-04-11 00:44:33,897 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..2078ac72dbf11f2733e685000a274eff81c2ac2d'
2024-04-11 00:44:33,912 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#28](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-04-11 00:44:33,918 [ scc.config] DEBUG Found github.token
2024-04-11 00:44:33,918 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-04-11 00:44:33,919 [ scc.git] DEBUG Calling 'git submodule update'
2024-04-11 00:44:33,968 [ scc.git] DEBUG Get sha1 of %s
2024-04-11 00:44:33,969 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-04-11 00:44:33,980 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-04-11 00:44:34,025 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-04-11 00:44:34,034 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fddac0f7d60> has no local changes
2024-04-11 00:44:34,034 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#28 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/)'
2024-04-11 00:44:34,050 [ scc.git] DEBUG [detached HEAD b671a2e] merge master -Dorg -Ssuccess-only
2024-04-11 00:44:34,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:34,051 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-04-11 00:44:34,143 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2024-04-11 00:44:34,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:34,319 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2024-04-11 00:44:34,327 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2024-04-11 00:44:34,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:34,734 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2024-04-11 00:44:34,740 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2024-04-11 00:44:35,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:35,151 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2024-04-11 00:44:35,157 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2024-04-11 00:44:35,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:35,575 [ scc.config] DEBUG Found submodule.omero-figure.url
2024-04-11 00:44:35,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:35,984 [ scc.config] DEBUG Found submodule.omero-figure.branch
2024-04-11 00:44:35,991 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2024-04-11 00:44:36,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:36,404 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2024-04-11 00:44:36,412 [ scc.config] DEBUG Found submodule.omero-gallery.url
2024-04-11 00:44:36,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:36,809 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2024-04-11 00:44:36,815 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2024-04-11 00:44:37,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:37,227 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2024-04-11 00:44:37,232 [ scc.config] DEBUG Found submodule.omero-mapr.url
2024-04-11 00:44:37,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:37,639 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2024-04-11 00:44:37,646 [ scc.config] DEBUG Found submodule.omero-metadata.url
2024-04-11 00:44:38,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:38,056 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2024-04-11 00:44:38,062 [ scc.config] DEBUG Found submodule.omero-parade.url
2024-04-11 00:44:38,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:38,473 [ scc.config] DEBUG Found submodule.omero-parade.branch
2024-04-11 00:44:38,478 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2024-04-11 00:44:38,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:38,891 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2024-04-11 00:44:38,898 [ scc.config] DEBUG Found submodule.omero-rois.url
2024-04-11 00:44:39,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:39,317 [ scc.config] DEBUG Found submodule.omero-signup.url
2024-04-11 00:44:39,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:39,731 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2024-04-11 00:44:40,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:40,127 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2024-04-11 00:44:40,132 [ scc.config] DEBUG Found submodule.omero-upload.url
2024-04-11 00:44:40,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:40,549 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2024-04-11 00:44:40,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:40,952 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2024-04-11 00:44:41,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:41,365 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2024-04-11 00:44:41,371 [ scc.config] DEBUG Found submodule.omero-weberror.url
2024-04-11 00:44:41,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:41,777 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2024-04-11 00:44:41,783 [ scc.config] DEBUG Found submodule.omero-webtest.url
2024-04-11 00:44:42,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:42,201 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2024-04-11 00:44:42,211 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2024-04-11 00:44:42,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:42,616 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2024-04-11 00:44:42,622 [ scc.config] DEBUG Found submodule.scripts.url
2024-04-11 00:44:43,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-04-11 00:44:43,025 [ scc.config] DEBUG Found submodule.scripts.branch
2024-04-11 00:44:43,026 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-04-11 00:44:43,118 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fddad385ac0> has local changes
2024-04-11 00:44:43,118 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 359 dependabot[bot] 'Bump omero-figure from `3b7ccfa` to `852b510`'
Repository: ome/minimal-omero-client
Already up to date.
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Merged PRs:
- PR 25 jburel 'review message'
Repository: ome/omero-cli-render
Excluded PRs:
- PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
- PR 54 dominikl 'Change rendering settings spec' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
- PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft)
Already up to date.
Merged PRs:
- PR 147 will-moore 'Name option'
Conflicting PRs (not included):
- PR 102 will-moore 'Zarr export tests'
- PR 123 will-moore 'Support export of Fileset:ID'
Repository: ome/omero-figure
Excluded PRs:
- PR 549 will-moore 'Inset feature' (stage: draft)
- PR 543 will-moore 'Plate well labels' (stage: draft)
Already up to date.
Merged PRs:
- PR 477 will-moore 'Vite'
- PR 548 will-moore 'Fix cropping of panel labels and float usage for shape labels'
- PR 550 will-moore 'Don't update zoom to undefined on setId'
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Updating a232ed0..9d8d147
Previously merged:
- PR 468 dependabot[bot] 'Bump express from 4.18.2 to 4.19.2'
- PR 467 dependabot[bot] 'Bump webpack-dev-middleware from 5.3.3 to 5.3.4'
Merged PRs:
- PR 456 will-moore 'Don't use tiles for non-big movies'
- PR 460 will-moore 'Channel min spinner fix'
- PR 464 will-moore 'Tile load error warning'
- PR 465 will-moore 'Save as Figure'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
Repository: ome/omero-metadata
Already up to date.
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
- PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
- PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 14 jburel 'use conda-forge channel'
Repository: ome/omero-rois
Excluded PRs:
- PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 6 dominikl 'Add method to create masks grouped by label id'
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
Repository: ome/omero-upload
Already up to date.
Repository: ome/omero-virtual-microscope
Already up to date.
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Already up to date.
Repository: openmicroscopy/omero-webtest
Already up to date.
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#28 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/28/)'
2024-04-11 00:44:43,133 [ scc.git] DEBUG [detached HEAD eed769d] merge master -Dorg -Ssuccess-only
2024-04-11 00:44:43,133 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2024-04-11 00:44:43,134 [ scc.merge] INFO Repository: ome/omero-plugins
2024-04-11 00:44:43,134 [ scc.merge] INFO Already up to date.
2024-04-11 00:44:43,134 [ scc.merge] INFO
2024-04-11 00:44:43,134 [ scc.merge] INFO Merged PRs:
2024-04-11 00:44:43,134 [ scc.merge] INFO - PR 359 dependabot[bot] 'Bump omero-figure from `3b7ccfa` to `852b510`'
2024-04-11 00:44:43,134 [ scc.merge] INFO
2024-04-11 00:44:43,134 [ scc.merge] INFO Repository: ome/minimal-omero-client
2024-04-11 00:44:43,134 [ scc.merge] INFO Already up to date.
2024-04-11 00:44:43,134 [ scc.merge] INFO
2024-04-11 00:44:43,134 [ scc.merge] INFO
2024-04-11 00:44:43,134 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2024-04-11 00:44:43,134 [ scc.merge] INFO Excluded PRs:
2024-04-11 00:44:43,134 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2024-04-11 00:44:43,134 [ scc.merge] INFO Already up to date.
2024-04-11 00:44:43,134 [ scc.merge] INFO
2024-04-11 00:44:43,134 [ scc.merge] INFO Merged PRs:
2024-04-11 00:44:43,134 [ scc.merge] INFO - PR 25 jburel 'review message'
2024-04-11 00:44:43,135 [ scc.merge] INFO
2024-04-11 00:44:43,135 [ scc.merge] INFO Repository: ome/omero-cli-render
2024-04-11 00:44:43,135 [ scc.merge] INFO Excluded PRs:
2024-04-11 00:44:43,135 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
2024-04-11 00:44:43,135 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft)
2024-04-11 00:44:43,135 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2024-04-11 00:44:43,135 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft)
2024-04-11 00:44:43,135 [ scc.merge] INFO Already up to date.
2024-04-11 00:44:43,135 [ scc.merge] INFO
2024-04-11 00:44:43,135 [ scc.merge] INFO Merged PRs:
2024-04-11 00:44:43,135 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate'
2024-04-11 00:44:43,135 [ scc.merge] INFO
2024-04-11 00:44:43,135 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2024-04-11 00:44:43,135 [ scc.merge] INFO Excluded PRs:
2024-04-11 00:44:43,135 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-04-11 00:44:43,135 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft)
2024-04-11 00:44:43,135 [ scc.merge] INFO Already up to date.
2024-04-11 00:44:43,135 [ scc.merge] INFO
2024-04-11 00:44:43,135 [ scc.merge] INFO Merged PRs:
2024-04-11 00:44:43,135 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2024-04-11 00:44:43,136 [ scc.merge] INFO
2024-04-11 00:44:43,136 [ scc.merge] INFO Conflicting PRs (not included):
2024-04-11 00:44:43,136 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests'
2024-04-11 00:44:43,136 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID'
2024-04-11 00:44:43,136 [ scc.merge] INFO
2024-04-11 00:44:43,136 [ scc.merge] INFO Repository: ome/omero-figure
2024-04-11 00:44:43,136 [ scc.merge] INFO Excluded PRs:
2024-04-11 00:44:43,136 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' (stage: draft)
2024-04-11 00:44:43,136 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (stage: draft)
2024-04-11 00:44:43,136 [ scc.merge] INFO Already up to date.
2024-04-11 00:44:43,136 [ scc.merge] INFO
2024-04-11 00:44:43,136 [ scc.merge] INFO Merged PRs:
2024-04-11 00:44:43,136 [ scc.merge] INFO - PR 477 will-moore 'Vite'
2024-04-11 00:44:43,136 [ scc.merge] INFO - PR 548 will-moore 'Fix cropping of panel labels and float usage for shape labels'
2024-04-11 00:44:43,136 [ scc.merge] INFO - PR 550 will-moore 'Don't update zoom to undefined on setId'
2024-04-11 00:44:43,136 [ scc.merge] INFO
2024-04-11 00:44:43,136 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2024-04-11 00:44:43,136 [ scc.merge] INFO Already up to date.
2024-04-11 00:44:43,136 [ scc.merge] INFO
2024-04-11 00:44:43,136 [ scc.merge] INFO Merged PRs:
2024-04-11 00:44:43,136 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2024-04-11 00:44:43,136 [ scc.merge] INFO
2024-04-11 00:44:43,137 [ scc.merge] INFO Repository: ome/omero-gallery
2024-04-11 00:44:43,137 [ scc.merge] INFO Already up to date.
2024-04-11 00:44:43,137 [ scc.merge] INFO
2024-04-11 00:44:43,137 [ scc.merge] INFO Merged PRs:
2024-04-11 00:44:43,137 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'
2024-04-11 00:44:43,137 [ scc.merge] INFO
2024-04-11 00:44:43,137 [ scc.merge] INFO Repository: ome/omero-iviewer
2024-04-11 00:44:43,137 [ scc.merge] INFO Excluded PRs:
2024-04-11 00:44:43,137 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2024-04-11 00:44:43,137 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2024-04-11 00:44:43,137 [ scc.merge] INFO Updating a232ed0..9d8d147
2024-04-11 00:44:43,137 [ scc.merge] INFO Previously merged:
2024-04-11 00:44:43,137 [ scc.merge] INFO - PR 468 dependabot[bot] 'Bump express from 4.18.2 to 4.19.2'
2024-04-11 00:44:43,137 [ scc.merge] INFO - PR 467 dependabot[bot] 'Bump webpack-dev-middleware from 5.3.3 to 5.3.4'
2024-04-11 00:44:43,137 [ scc.merge] INFO
2024-04-11 00:44:43,137 [ scc.merge] INFO Merged PRs:
2024-04-11 00:44:43,137 [ scc.merge] INFO - PR 456 will-moore 'Don't use tiles for non-big movies'
2024-04-11 00:44:43,137 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2024-04-11 00:44:43,137 [ scc.merge] INFO - PR 464 will-moore 'Tile load error warning'
2024-04-11 00:44:43,137 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2024-04-11 00:44:43,137 [ scc.merge] INFO
2024-04-11 00:44:43,138 [ scc.merge] INFO Repository: ome/omero-mapr
2024-04-11 00:44:43,138 [ scc.merge] INFO Excluded PRs:
2024-04-11 00:44:43,138 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2024-04-11 00:44:43,138 [ scc.merge] INFO Already up to date.
2024-04-11 00:44:43,138 [ scc.merge] INFO
2024-04-11 00:44:43,138 [ scc.merge] INFO Merged PRs:
2024-04-11 00:44:43,138 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2024-04-11 00:44:43,138 [ scc.merge] INFO
2024-04-11 00:44:43,138 [ scc.merge] INFO Repository: ome/omero-metadata
2024-04-11 00:44:43,138 [ scc.merge] INFO Already up to date.
2024-04-11 00:44:43,138 [ scc.merge] INFO
2024-04-11 00:44:43,138 [ scc.merge] INFO Conflicting PRs (not included):
2024-04-11 00:44:43,138 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-04-11 00:44:43,138 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-04-11 00:44:43,138 [ scc.merge] INFO
2024-04-11 00:44:43,138 [ scc.merge] INFO Repository: ome/omero-parade
2024-04-11 00:44:43,138 [ scc.merge] INFO Excluded PRs:
2024-04-11 00:44:43,138 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2024-04-11 00:44:43,138 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2024-04-11 00:44:43,138 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2024-04-11 00:44:43,138 [ scc.merge] INFO Already up to date.
2024-04-11 00:44:43,138 [ scc.merge] INFO
2024-04-11 00:44:43,139 [ scc.merge] INFO Merged PRs:
2024-04-11 00:44:43,139 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
2024-04-11 00:44:43,139 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
2024-04-11 00:44:43,139 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
2024-04-11 00:44:43,139 [ scc.merge] INFO
2024-04-11 00:44:43,139 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2024-04-11 00:44:43,139 [ scc.merge] INFO Already up to date.
2024-04-11 00:44:43,139 [ scc.merge] INFO
2024-04-11 00:44:43,139 [ scc.merge] INFO Merged PRs:
2024-04-11 00:44:43,139 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel'
2024-04-11 00:44:43,139 [ scc.merge] INFO
2024-04-11 00:44:43,139 [ scc.merge] INFO Repository: ome/omero-rois
2024-04-11 00:44:43,139 [ scc.merge] INFO Excluded PRs:
2024-04-11 00:44:43,139 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-04-11 00:44:43,139 [ scc.merge] INFO Already up to date.
2024-04-11 00:44:43,139 [ scc.merge] INFO
2024-04-11 00:44:43,139 [ scc.merge] INFO Merged PRs:
2024-04-11 00:44:43,139 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-04-11 00:44:43,139 [ scc.merge] INFO
2024-04-11 00:44:43,139 [ scc.merge] INFO Repository: ome/omero-signup
2024-04-11 00:44:43,139 [ scc.merge] INFO Already up to date.
2024-04-11 00:44:43,140 [ scc.merge] INFO
2024-04-11 00:44:43,140 [ scc.merge] INFO Conflicting PRs (not included):
2024-04-11 00:44:43,140 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2024-04-11 00:44:43,140 [ scc.merge] INFO
2024-04-11 00:44:43,140 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2024-04-11 00:44:43,140 [ scc.merge] INFO Already up to date.
2024-04-11 00:44:43,140 [ scc.merge] INFO
2024-04-11 00:44:43,140 [ scc.merge] INFO Merged PRs:
2024-04-11 00:44:43,140 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-04-11 00:44:43,140 [ scc.merge] INFO
2024-04-11 00:44:43,140 [ scc.merge] INFO Repository: ome/omero-upload
2024-04-11 00:44:43,140 [ scc.merge] INFO Already up to date.
2024-04-11 00:44:43,140 [ scc.merge] INFO
2024-04-11 00:44:43,140 [ scc.merge] INFO
2024-04-11 00:44:43,140 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2024-04-11 00:44:43,140 [ scc.merge] INFO Already up to date.
2024-04-11 00:44:43,140 [ scc.merge] INFO
2024-04-11 00:44:43,140 [ scc.merge] INFO
2024-04-11 00:44:43,140 [ scc.merge] INFO Repository: ome/omero-web-zarr
2024-04-11 00:44:43,140 [ scc.merge] INFO Excluded PRs:
2024-04-11 00:44:43,140 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2024-04-11 00:44:43,140 [ scc.merge] INFO Already up to date.
2024-04-11 00:44:43,141 [ scc.merge] INFO
2024-04-11 00:44:43,141 [ scc.merge] INFO Conflicting PRs (not included):
2024-04-11 00:44:43,141 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-04-11 00:44:43,141 [ scc.merge] INFO
2024-04-11 00:44:43,141 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2024-04-11 00:44:43,141 [ scc.merge] INFO Already up to date.
2024-04-11 00:44:43,141 [ scc.merge] INFO
2024-04-11 00:44:43,141 [ scc.merge] INFO
2024-04-11 00:44:43,141 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2024-04-11 00:44:43,141 [ scc.merge] INFO Already up to date.
2024-04-11 00:44:43,141 [ scc.merge] INFO
2024-04-11 00:44:43,141 [ scc.merge] INFO
2024-04-11 00:44:43,141 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2024-04-11 00:44:43,141 [ scc.merge] INFO Already up to date.
2024-04-11 00:44:43,141 [ scc.merge] INFO
2024-04-11 00:44:43,141 [ scc.merge] INFO Conflicting PRs (not included):
2024-04-11 00:44:43,141 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2024-04-11 00:44:43,141 [ scc.merge] INFO
2024-04-11 00:44:43,141 [ scc.merge] INFO Repository: ome/scripts
2024-04-11 00:44:43,141 [ scc.merge] INFO Excluded PRs:
2024-04-11 00:44:43,141 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-04-11 00:44:43,142 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-04-11 00:44:43,142 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-04-11 00:44:43,142 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-04-11 00:44:43,142 [ scc.merge] INFO Already up to date.
2024-04-11 00:44:43,142 [ scc.merge] INFO
2024-04-11 00:44:43,142 [ scc.merge] INFO Conflicting PRs (not included):
2024-04-11 00:44:43,142 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-04-11 00:44:43,142 [ scc.merge] INFO
2024-04-11 00:44:43,142 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-04-11 00:44:43,142 [ scc.git] DEBUG Calling 'git remote'
2024-04-11 00:44:43,149 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2024-04-11 00:44:43,149 [ scc.git] DEBUG Calling 'git remote'
2024-04-11 00:44:43,155 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:43,155 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2024-04-11 00:44:43,155 [ scc.git] DEBUG Calling 'git remote'
2024-04-11 00:44:43,161 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:43,161 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2024-04-11 00:44:43,161 [ scc.git] DEBUG Calling 'git remote'
2024-04-11 00:44:43,166 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:43,166 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2024-04-11 00:44:43,167 [ scc.git] DEBUG Calling 'git remote'
2024-04-11 00:44:43,172 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:43,172 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2024-04-11 00:44:43,172 [ scc.git] DEBUG Calling 'git remote'
2024-04-11 00:44:43,177 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:43,177 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2024-04-11 00:44:43,177 [ scc.git] DEBUG Calling 'git remote'
2024-04-11 00:44:43,182 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:43,182 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-04-11 00:44:43,182 [ scc.git] DEBUG Calling 'git remote'
2024-04-11 00:44:43,187 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:43,188 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-04-11 00:44:43,188 [ scc.git] DEBUG Calling 'git remote'
2024-04-11 00:44:43,193 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:43,193 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-04-11 00:44:43,193 [ scc.git] DEBUG Calling 'git remote'
2024-04-11 00:44:43,198 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:43,198 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-04-11 00:44:43,198 [ scc.git] DEBUG Calling 'git remote'
2024-04-11 00:44:43,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:43,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-04-11 00:44:43,203 [ scc.git] DEBUG Calling 'git remote'
2024-04-11 00:44:43,208 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:43,209 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-04-11 00:44:43,209 [ scc.git] DEBUG Calling 'git remote'
2024-04-11 00:44:43,214 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:43,214 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-04-11 00:44:43,214 [ scc.git] DEBUG Calling 'git remote'
2024-04-11 00:44:43,218 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:43,219 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-04-11 00:44:43,219 [ scc.git] DEBUG Calling 'git remote'
2024-04-11 00:44:43,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:43,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-04-11 00:44:43,224 [ scc.git] DEBUG Calling 'git remote'
2024-04-11 00:44:43,230 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:43,230 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-04-11 00:44:43,230 [ scc.git] DEBUG Calling 'git remote'
2024-04-11 00:44:43,235 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:43,236 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-04-11 00:44:43,236 [ scc.git] DEBUG Calling 'git remote'
2024-04-11 00:44:43,240 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:43,241 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-04-11 00:44:43,241 [ scc.git] DEBUG Calling 'git remote'
2024-04-11 00:44:43,246 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:43,246 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-04-11 00:44:43,246 [ scc.git] DEBUG Calling 'git remote'
2024-04-11 00:44:43,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:43,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-04-11 00:44:43,251 [ scc.git] DEBUG Calling 'git remote'
2024-04-11 00:44:43,255 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:43,256 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-04-11 00:44:43,256 [ scc.git] DEBUG Calling 'git remote'
2024-04-11 00:44:43,260 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-04-11 00:44:43,260 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-04-11 00:44:43,261 [ scc.git] DEBUG Calling 'git remote'
2024-04-11 00:44:43,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: The wheel package is not available.
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WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.8.2 to 5.9.1-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD b3d809b] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
HEAD detached from 027b3e6
nothing to commit, working tree clean
Entering 'omero-cli-render'
HEAD detached from 53e3f42
nothing to commit, working tree clean
Entering 'omero-cli-zarr'
HEAD detached from 2ca566b
Untracked files:
(use "git add <file>..." to include in what will be committed)
.eggs/
nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
HEAD detached from 852b5109
nothing to commit, working tree clean
Entering 'omero-fpbioimage'
HEAD detached from e5b3ca3
nothing to commit, working tree clean
Entering 'omero-gallery'
HEAD detached from 56f4435
nothing to commit, working tree clean
Entering 'omero-iviewer'
HEAD detached from a232ed0
nothing to commit, working tree clean
Entering 'omero-mapr'
HEAD detached from 9631b15
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Entering 'omero-metadata'
HEAD detached from e2fc5ec
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Entering 'omero-parade'
HEAD detached from 5d441c2
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Entering 'omero-prometheus-tools'
HEAD detached from 18bccb6
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Entering 'omero-rois'
HEAD detached from 5c752d5
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Entering 'omero-signup'
HEAD detached from c8610db
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Entering 'omero-test-infra'
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Entering 'omero-upload'
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Entering 'omero-virtual-microscope'
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Entering 'omero-web-zarr'
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Entering 'omero-weberror'
HEAD detached from adfa132
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Entering 'omero-webtest'
HEAD detached from 8da48e1
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Entering 'rOMERO-gateway'
HEAD detached from 7b5d64d
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Entering 'scripts'
HEAD detached from 2078ac7
nothing to commit, working tree clean
[detached HEAD 555dc73] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2024-04-11 00:45:31,217 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2024-04-11 00:45:40,164 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2024-04-11 00:45:42,609 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-04-11 00:45:47,204 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-04-11 00:46:34,892 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
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