Skipping 224 KB..
Full LogTestTestTestTestTestTestTestTestTestTestTestTestTest
2025-04-20 01:08:44,000 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:08:44,000 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:08:44,002 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-20 01:08:44,040 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-20 01:08:44,047 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f36783a5b90> has no local changes
2025-04-20 01:08:44,047 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-iviewer
Excluded PRs:
- PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
- PR 227 will-moore 'Vectortile investigation' (status: failure)
Already up to date.
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Generated by OMERO-plugins-push#393 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/)'
2025-04-20 01:08:44,054 [ scc.git] DEBUG [detached HEAD a4b8286] merge master -Dorg -Ssuccess-only
2025-04-20 01:08:44,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:08:44,054 [ scc.repo] DEBUG ## PRs found:
2025-04-20 01:08:44,213 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:44,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2025-04-20 01:08:44,804 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:45,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None
2025-04-20 01:08:45,269 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:45,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None
2025-04-20 01:08:45,776 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:45,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-20 01:08:46,224 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:46,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None
2025-04-20 01:08:46,788 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:46,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2
2025-04-20 01:08:46,965 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-04-20 01:08:47,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:47,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2025-04-20 01:08:47,724 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:48,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2025-04-20 01:08:48,283 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:48,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-04-20 01:08:48,793 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:49,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-20 01:08:49,328 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:49,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-04-20 01:08:49,841 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:50,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2025-04-20 01:08:50,018 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2025-04-20 01:08:50,018 [ scc.repo] DEBUG ## Branches found:
2025-04-20 01:08:50,018 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-04-20 01:08:50,018 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:08:50,018 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:08:50,021 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-04-20 01:08:50,023 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-20 01:08:50,023 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-04-20 01:08:50,026 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-04-20 01:08:50,029 [ scc.git] DEBUG Already up to date.
2025-04-20 01:08:50,029 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2025-04-20 01:08:50,339 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-04-20 01:08:50,339 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2025-04-20 01:08:50,344 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head'
2025-04-20 01:08:50,616 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-04-20 01:08:50,616 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD
2025-04-20 01:08:50,620 [ scc.git] DEBUG ## Unique users: []
2025-04-20 01:08:50,620 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:08:50,620 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:08:50,622 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-04-20 01:08:50,626 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:08:50,628 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-04-20 01:08:50,637 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-04-20 01:08:50,640 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2025-04-20 01:08:50,640 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2025-04-20 01:08:50,640 [ scc.git] DEBUG requirements.txt | 2 +-
2025-04-20 01:08:50,641 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2025-04-20 01:08:50,641 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2025-04-20 01:08:50,641 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2025-04-20 01:08:50,642 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:50,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:08:50,804 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-04-20 01:08:50,808 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:08:50,810 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-04-20 01:08:50,819 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-04-20 01:08:50,822 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-04-20 01:08:50,822 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-04-20 01:08:51,055 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:51,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:08:51,225 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-20 01:08:51,264 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:08:51,264 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:08:51,266 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-20 01:08:51,303 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-20 01:08:51,307 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f36789e8c10> has no local changes
2025-04-20 01:08:51,307 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Generated by OMERO-plugins-push#393 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/)'
2025-04-20 01:08:51,313 [ scc.git] DEBUG [detached HEAD c6084b1] merge master -Dorg -Ssuccess-only
2025-04-20 01:08:51,314 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:08:51,314 [ scc.repo] DEBUG ## PRs found:
2025-04-20 01:08:51,476 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:51,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2025-04-20 01:08:52,007 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:52,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2025-04-20 01:08:52,479 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:52,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2025-04-20 01:08:53,045 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:53,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-04-20 01:08:53,589 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:53,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-20 01:08:54,065 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:54,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-04-20 01:08:54,514 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:54,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2025-04-20 01:08:54,725 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-04-20 01:08:54,976 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:55,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2025-04-20 01:08:55,456 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:55,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2025-04-20 01:08:55,939 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:56,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-04-20 01:08:56,478 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:56,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-20 01:08:56,951 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:57,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-04-20 01:08:57,468 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:57,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2025-04-20 01:08:57,672 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-04-20 01:08:57,672 [ scc.repo] DEBUG ## Branches found:
2025-04-20 01:08:57,672 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-04-20 01:08:57,672 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:08:57,672 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:08:57,675 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-04-20 01:08:57,677 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-20 01:08:57,677 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-04-20 01:08:57,680 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-04-20 01:08:57,688 [ scc.git] DEBUG Updating 3cd120c..55060a2
2025-04-20 01:08:57,923 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:58,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None
2025-04-20 01:08:58,368 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2025-04-20 01:08:58,645 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-04-20 01:08:58,645 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2025-04-20 01:08:58,649 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2025-04-20 01:08:58,912 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-04-20 01:08:58,912 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2025-04-20 01:08:58,916 [ scc.git] DEBUG ## Unique users: []
2025-04-20 01:08:58,916 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:08:58,916 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:08:58,918 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-04-20 01:08:58,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:08:58,925 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-04-20 01:08:58,938 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2025-04-20 01:08:58,938 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2025-04-20 01:08:58,939 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-04-20 01:08:58,939 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-04-20 01:08:58,939 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-04-20 01:08:58,939 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-04-20 01:08:58,942 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-04-20 01:08:58,946 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-04-20 01:08:58,948 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:59,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:08:59,106 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-04-20 01:08:59,110 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501'
2025-04-20 01:08:59,114 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#393](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/populate.py
- src/omero_metadata/cli.py
--conflicts
2025-04-20 01:08:59,116 [ scc.config] DEBUG Found github.token
2025-04-20 01:08:59,116 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2025-04-20 01:08:59,116 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2025-04-20 01:08:59,120 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:08:59,122 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2025-04-20 01:08:59,137 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-04-20 01:08:59,137 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-04-20 01:08:59,137 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2025-04-20 01:08:59,137 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-04-20 01:08:59,137 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-04-20 01:08:59,140 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-04-20 01:08:59,145 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-04-20 01:08:59,357 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:08:59,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:08:59,518 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7'
2025-04-20 01:08:59,522 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501'
2025-04-20 01:08:59,525 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#393](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2025-04-20 01:08:59,527 [ scc.config] DEBUG Found github.token
2025-04-20 01:08:59,527 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2025-04-20 01:08:59,527 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-20 01:08:59,564 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:08:59,564 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:08:59,566 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-20 01:08:59,603 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-20 01:08:59,607 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f36783a7e10> has no local changes
2025-04-20 01:08:59,608 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#393 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/)'
2025-04-20 01:08:59,615 [ scc.git] DEBUG [detached HEAD 95d86b5] merge master -Dorg -Ssuccess-only
2025-04-20 01:08:59,615 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:08:59,615 [ scc.repo] DEBUG ## PRs found:
2025-04-20 01:08:59,768 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:00,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2025-04-20 01:09:00,391 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:00,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None
2025-04-20 01:09:00,900 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:01,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-04-20 01:09:01,426 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:01,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-20 01:09:01,905 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:02,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-04-20 01:09:02,391 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:02,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-04-20 01:09:02,848 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:03,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2
2025-04-20 01:09:03,051 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-04-20 01:09:03,302 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:03,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None
2025-04-20 01:09:03,589 [ scc.repo] DEBUG # ... Include label: dependencies
2025-04-20 01:09:03,840 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:04,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-04-20 01:09:04,417 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:04,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-20 01:09:04,927 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:05,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-04-20 01:09:05,479 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:05,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-04-20 01:09:05,959 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:06,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2
2025-04-20 01:09:06,139 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-04-20 01:09:06,390 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:07,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None
2025-04-20 01:09:07,399 [ scc.repo] DEBUG # ... Include label: dependencies
2025-04-20 01:09:07,650 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:07,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-04-20 01:09:08,209 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:08,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-20 01:09:08,720 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:09,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-04-20 01:09:09,252 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:09,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-04-20 01:09:09,785 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:09,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2
2025-04-20 01:09:09,953 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-04-20 01:09:10,204 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:10,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None
2025-04-20 01:09:10,686 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:10,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2025-04-20 01:09:11,172 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:11,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2025-04-20 01:09:11,656 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:11,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2025-04-20 01:09:12,149 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:12,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2025-04-20 01:09:12,652 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:12,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2025-04-20 01:09:13,130 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:13,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2025-04-20 01:09:13,385 [ scc.repo] DEBUG ## Branches found:
2025-04-20 01:09:13,385 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-04-20 01:09:13,386 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:13,386 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:13,388 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-04-20 01:09:13,391 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-20 01:09:13,391 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-04-20 01:09:13,394 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-04-20 01:09:13,397 [ scc.git] DEBUG Already up to date.
2025-04-20 01:09:13,397 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head'
2025-04-20 01:09:13,705 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-04-20 01:09:13,705 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD
2025-04-20 01:09:13,709 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head'
2025-04-20 01:09:14,004 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-04-20 01:09:14,004 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD
2025-04-20 01:09:14,008 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head'
2025-04-20 01:09:14,261 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-04-20 01:09:14,261 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD
2025-04-20 01:09:14,265 [ scc.git] DEBUG ## Unique users: []
2025-04-20 01:09:14,265 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:14,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:14,267 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0'
2025-04-20 01:09:14,270 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:14,272 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0'
2025-04-20 01:09:14,280 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-04-20 01:09:14,284 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++----------------------------
2025-04-20 01:09:14,284 [ scc.git] DEBUG package.json | 2 +-
2025-04-20 01:09:14,284 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-)
2025-04-20 01:09:14,285 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:14,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:09:14,451 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80'
2025-04-20 01:09:14,454 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:14,456 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80'
2025-04-20 01:09:14,466 [ scc.git] DEBUG Auto-merging package-lock.json
2025-04-20 01:09:14,466 [ scc.git] DEBUG Auto-merging package.json
2025-04-20 01:09:14,467 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-04-20 01:09:14,470 [ scc.git] DEBUG package-lock.json | 18 ++++++++++--------
2025-04-20 01:09:14,470 [ scc.git] DEBUG package.json | 2 +-
2025-04-20 01:09:14,470 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-)
2025-04-20 01:09:14,702 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:14,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:09:14,858 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-04-20 01:09:14,861 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:14,863 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-04-20 01:09:14,871 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-04-20 01:09:14,874 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-04-20 01:09:14,874 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-04-20 01:09:15,108 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:15,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:09:15,272 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-20 01:09:15,310 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:15,310 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:15,312 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-20 01:09:15,349 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-20 01:09:15,353 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f36783b6b50> has no local changes
2025-04-20 01:09:15,353 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Generated by OMERO-plugins-push#393 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/)'
2025-04-20 01:09:15,359 [ scc.git] DEBUG [detached HEAD a003af0] merge master -Dorg -Ssuccess-only
2025-04-20 01:09:15,359 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:09:15,360 [ scc.repo] DEBUG ## PRs found:
2025-04-20 01:09:15,523 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:15,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 2
2025-04-20 01:09:15,713 [ scc.repo] DEBUG ## Branches found:
2025-04-20 01:09:15,713 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-04-20 01:09:15,713 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:15,713 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:15,715 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-04-20 01:09:15,717 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-20 01:09:15,718 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-04-20 01:09:15,720 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-04-20 01:09:15,723 [ scc.git] DEBUG Already up to date.
2025-04-20 01:09:15,723 [ scc.git] DEBUG ## Unique users: []
2025-04-20 01:09:15,723 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:15,723 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:15,726 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-20 01:09:15,763 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:15,763 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:15,765 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-20 01:09:15,803 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-20 01:09:15,806 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3675206810> has no local changes
2025-04-20 01:09:15,806 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Already up to date.
Generated by OMERO-plugins-push#393 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/)'
2025-04-20 01:09:15,812 [ scc.git] DEBUG [detached HEAD 550d1ce] merge master -Dorg -Ssuccess-only
2025-04-20 01:09:15,812 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:09:15,812 [ scc.repo] DEBUG ## PRs found:
2025-04-20 01:09:15,964 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:16,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2025-04-20 01:09:16,474 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:16,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None
2025-04-20 01:09:16,969 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:17,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None
2025-04-20 01:09:17,456 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:17,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None
2025-04-20 01:09:17,677 [ scc.repo] DEBUG ## Branches found:
2025-04-20 01:09:17,677 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-04-20 01:09:17,677 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:17,677 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:17,679 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-04-20 01:09:17,681 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-20 01:09:17,682 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-04-20 01:09:17,684 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-04-20 01:09:17,687 [ scc.git] DEBUG Already up to date.
2025-04-20 01:09:17,687 [ scc.git] DEBUG ## Unique users: []
2025-04-20 01:09:17,687 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:17,687 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:17,690 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-20 01:09:17,727 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:17,727 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:17,729 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-20 01:09:17,765 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-20 01:09:17,768 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f36751f5d10> has no local changes
2025-04-20 01:09:17,768 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 33 jo-mueller 'Add roi to array functions' (user: jo-mueller)
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Generated by OMERO-plugins-push#393 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/)'
2025-04-20 01:09:17,774 [ scc.git] DEBUG [detached HEAD a149b9e] merge master -Dorg -Ssuccess-only
2025-04-20 01:09:17,775 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:09:17,775 [ scc.repo] DEBUG ## PRs found:
2025-04-20 01:09:17,927 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:18,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2025-04-20 01:09:18,510 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:18,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2025-04-20 01:09:18,982 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:19,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2025-04-20 01:09:19,445 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:19,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-04-20 01:09:19,985 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:20,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-20 01:09:20,461 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:20,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-04-20 01:09:20,944 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:21,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2025-04-20 01:09:21,129 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2025-04-20 01:09:21,129 [ scc.repo] DEBUG ## Branches found:
2025-04-20 01:09:21,130 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-04-20 01:09:21,130 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:21,130 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:21,132 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-04-20 01:09:21,134 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-20 01:09:21,135 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-04-20 01:09:21,137 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-04-20 01:09:21,140 [ scc.git] DEBUG Already up to date.
2025-04-20 01:09:21,140 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2025-04-20 01:09:21,413 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2025-04-20 01:09:21,413 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2025-04-20 01:09:21,417 [ scc.git] DEBUG ## Unique users: []
2025-04-20 01:09:21,417 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:21,417 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:21,419 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-04-20 01:09:21,422 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:21,424 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-04-20 01:09:21,433 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2025-04-20 01:09:21,433 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2025-04-20 01:09:21,433 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2025-04-20 01:09:21,433 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2025-04-20 01:09:21,433 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2025-04-20 01:09:21,433 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2025-04-20 01:09:21,433 [ scc.git] DEBUG Auto-merging setup.py
2025-04-20 01:09:21,433 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2025-04-20 01:09:21,434 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-04-20 01:09:21,434 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-04-20 01:09:21,437 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e'
2025-04-20 01:09:21,441 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build
2025-04-20 01:09:21,442 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:21,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:09:21,601 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-04-20 01:09:21,604 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e'
2025-04-20 01:09:21,607 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#393](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_signup/signup_settings.py
- setup.py
- omero_signup/views.py
- omero_signup/urls.py
--conflicts
2025-04-20 01:09:21,609 [ scc.config] DEBUG Found github.token
2025-04-20 01:09:21,609 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2025-04-20 01:09:21,609 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-20 01:09:21,646 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:21,646 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:21,648 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-20 01:09:21,686 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-20 01:09:21,690 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f36785db6d0> has no local changes
2025-04-20 01:09:21,690 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#393 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/)'
2025-04-20 01:09:21,696 [ scc.git] DEBUG [detached HEAD 86cd371] merge master -Dorg -Ssuccess-only
2025-04-20 01:09:21,696 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:09:21,696 [ scc.repo] DEBUG ## PRs found:
2025-04-20 01:09:21,852 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:22,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2025-04-20 01:09:22,372 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:22,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/76 HTTP/1.1" 200 None
2025-04-20 01:09:22,838 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:23,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None
2025-04-20 01:09:23,368 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:23,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-20 01:09:23,892 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:24,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-04-20 01:09:24,372 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:24,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None
2025-04-20 01:09:24,826 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:24,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6?per_page=1 HTTP/1.1" 200 2
2025-04-20 01:09:25,000 [ scc.repo] DEBUG - PR 76 will-moore 'Run cli deps'
2025-04-20 01:09:25,251 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:25,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None
2025-04-20 01:09:25,739 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:25,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None
2025-04-20 01:09:26,245 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:26,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None
2025-04-20 01:09:26,756 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:27,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-20 01:09:27,289 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:27,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-04-20 01:09:27,775 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:28,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None
2025-04-20 01:09:28,263 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:28,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None
2025-04-20 01:09:28,722 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:28,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2025-04-20 01:09:29,207 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:29,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2025-04-20 01:09:29,653 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:30,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2025-04-20 01:09:30,263 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:30,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-20 01:09:30,710 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:30,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2025-04-20 01:09:31,170 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:31,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2025-04-20 01:09:31,375 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2025-04-20 01:09:31,375 [ scc.repo] DEBUG ## Branches found:
2025-04-20 01:09:31,375 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-04-20 01:09:31,376 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:31,376 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:31,378 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-04-20 01:09:31,381 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-20 01:09:31,381 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-04-20 01:09:31,384 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-04-20 01:09:31,387 [ scc.git] DEBUG Already up to date.
2025-04-20 01:09:31,387 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2025-04-20 01:09:31,686 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-04-20 01:09:31,686 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD
2025-04-20 01:09:31,690 [ scc.git] DEBUG Calling 'git fetch origin pull/76/head'
2025-04-20 01:09:31,948 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-04-20 01:09:31,948 [ scc.git] DEBUG * branch refs/pull/76/head -> FETCH_HEAD
2025-04-20 01:09:31,952 [ scc.git] DEBUG ## Unique users: []
2025-04-20 01:09:31,953 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:31,953 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:31,955 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2025-04-20 01:09:31,959 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:31,961 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2025-04-20 01:09:31,974 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-04-20 01:09:31,977 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++
2025-04-20 01:09:31,977 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++
2025-04-20 01:09:31,977 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++
2025-04-20 01:09:31,977 [ scc.git] DEBUG idr/70-reset-password.sh | 1 +
2025-04-20 01:09:31,978 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 +
2025-04-20 01:09:31,978 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 +
2025-04-20 01:09:31,979 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:31,979 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++
2025-04-20 01:09:31,979 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++
2025-04-20 01:09:31,979 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++
2025-04-20 01:09:31,979 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2025-04-20 01:09:31,979 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++
2025-04-20 01:09:31,979 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++
2025-04-20 01:09:31,979 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++
2025-04-20 01:09:31,979 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++
2025-04-20 01:09:31,979 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++
2025-04-20 01:09:31,979 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++
2025-04-20 01:09:31,979 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++
2025-04-20 01:09:31,979 [ scc.git] DEBUG idr/omero/Dockerfile | 3 +
2025-04-20 01:09:31,979 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++
2025-04-20 01:09:31,979 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++
2025-04-20 01:09:31,979 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++
2025-04-20 01:09:31,979 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++
2025-04-20 01:09:31,979 [ scc.git] DEBUG 22 files changed, 824 insertions(+)
2025-04-20 01:09:31,979 [ scc.git] DEBUG create mode 100644 idr-compose.yml
2025-04-20 01:09:31,979 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml
2025-04-20 01:09:31,979 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh
2025-04-20 01:09:31,979 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh
2025-04-20 01:09:31,979 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf
2025-04-20 01:09:31,979 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf
2025-04-20 01:09:31,979 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2025-04-20 01:09:31,979 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2025-04-20 01:09:31,979 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf
2025-04-20 01:09:31,979 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2025-04-20 01:09:31,979 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2025-04-20 01:09:31,980 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2025-04-20 01:09:31,980 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2025-04-20 01:09:31,980 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2025-04-20 01:09:31,980 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2025-04-20 01:09:31,980 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2025-04-20 01:09:31,980 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf
2025-04-20 01:09:31,980 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile
2025-04-20 01:09:31,980 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml
2025-04-20 01:09:31,980 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile
2025-04-20 01:09:31,980 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile
2025-04-20 01:09:31,980 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml
2025-04-20 01:09:32,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:09:32,140 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6'
2025-04-20 01:09:32,144 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:32,146 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 76 (Run cli deps) bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6'
2025-04-20 01:09:32,155 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-04-20 01:09:32,158 [ scc.git] DEBUG docker | 1 +
2025-04-20 01:09:32,158 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2025-04-20 01:09:32,391 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:32,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:09:32,551 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-20 01:09:32,590 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:32,590 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:32,592 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-20 01:09:32,630 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-20 01:09:32,634 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f36751e9850> has no local changes
2025-04-20 01:09:32,634 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
- PR 76 will-moore 'Run cli deps'
Generated by OMERO-plugins-push#393 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/)'
2025-04-20 01:09:32,640 [ scc.git] DEBUG [detached HEAD d3f0e66] merge master -Dorg -Ssuccess-only
2025-04-20 01:09:32,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:09:32,641 [ scc.repo] DEBUG ## PRs found:
2025-04-20 01:09:32,802 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:32,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2
2025-04-20 01:09:32,994 [ scc.repo] DEBUG ## Branches found:
2025-04-20 01:09:32,994 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-04-20 01:09:32,994 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:32,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:32,996 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-04-20 01:09:32,999 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-20 01:09:32,999 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-04-20 01:09:33,002 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-04-20 01:09:33,005 [ scc.git] DEBUG Already up to date.
2025-04-20 01:09:33,005 [ scc.git] DEBUG ## Unique users: []
2025-04-20 01:09:33,005 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:33,005 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:33,007 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-20 01:09:33,044 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:33,044 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:33,046 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-20 01:09:33,083 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-20 01:09:33,087 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3678407290> has no local changes
2025-04-20 01:09:33,087 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Already up to date.
Generated by OMERO-plugins-push#393 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/)'
2025-04-20 01:09:33,093 [ scc.git] DEBUG [detached HEAD d84157c] merge master -Dorg -Ssuccess-only
2025-04-20 01:09:33,093 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:09:33,093 [ scc.repo] DEBUG ## PRs found:
2025-04-20 01:09:33,245 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:33,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None
2025-04-20 01:09:33,764 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:34,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20 HTTP/1.1" 200 None
2025-04-20 01:09:34,254 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:34,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20/comments HTTP/1.1" 200 None
2025-04-20 01:09:34,703 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:34,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None
2025-04-20 01:09:35,242 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:35,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-20 01:09:35,757 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:35,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-04-20 01:09:36,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:36,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None
2025-04-20 01:09:36,653 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:36,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/14c890a5b62ef9937c751230251154351debb9ea?per_page=1 HTTP/1.1" 200 2
2025-04-20 01:09:36,845 [ scc.repo] DEBUG - PR 20 jburel 'Build'
2025-04-20 01:09:36,845 [ scc.repo] DEBUG ## Branches found:
2025-04-20 01:09:36,845 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-04-20 01:09:36,845 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:36,845 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:36,847 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-04-20 01:09:36,850 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-20 01:09:36,850 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-04-20 01:09:36,853 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-04-20 01:09:36,856 [ scc.git] DEBUG Already up to date.
2025-04-20 01:09:36,856 [ scc.git] DEBUG Calling 'git fetch origin pull/20/head'
2025-04-20 01:09:37,141 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope
2025-04-20 01:09:37,141 [ scc.git] DEBUG * branch refs/pull/20/head -> FETCH_HEAD
2025-04-20 01:09:37,145 [ scc.git] DEBUG ## Unique users: []
2025-04-20 01:09:37,145 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:37,145 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:37,147 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14c890a5b62ef9937c751230251154351debb9ea'
2025-04-20 01:09:37,150 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:37,152 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 20 (Build) 14c890a5b62ef9937c751230251154351debb9ea'
2025-04-20 01:09:37,160 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-04-20 01:09:37,163 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +-
2025-04-20 01:09:37,163 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2025-04-20 01:09:37,163 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++
2025-04-20 01:09:37,163 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-)
2025-04-20 01:09:37,163 [ scc.git] DEBUG create mode 100755 .omeroci/app-build
2025-04-20 01:09:37,164 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:37,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:09:37,321 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-20 01:09:37,358 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:37,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:37,360 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-20 01:09:37,396 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-20 01:09:37,400 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3675231dd0> has no local changes
2025-04-20 01:09:37,400 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Already up to date.
Merged PRs:
- PR 20 jburel 'Build'
Generated by OMERO-plugins-push#393 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/)'
2025-04-20 01:09:37,406 [ scc.git] DEBUG [detached HEAD 3d014a4] merge master -Dorg -Ssuccess-only
2025-04-20 01:09:37,406 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:09:37,406 [ scc.git] INFO Overriding base-branch from master to main
2025-04-20 01:09:37,407 [ scc.repo] DEBUG ## PRs found:
2025-04-20 01:09:37,572 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:37,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2025-04-20 01:09:38,094 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:38,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None
2025-04-20 01:09:38,578 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:38,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None
2025-04-20 01:09:39,077 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:39,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None
2025-04-20 01:09:39,611 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:39,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-20 01:09:40,097 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:40,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-04-20 01:09:40,588 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:40,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2025-04-20 01:09:41,136 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:41,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2025-04-20 01:09:41,634 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:41,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2025-04-20 01:09:42,143 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:42,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-04-20 01:09:42,675 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:42,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-20 01:09:43,133 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:43,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-04-20 01:09:43,672 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:43,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2025-04-20 01:09:43,874 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-04-20 01:09:43,875 [ scc.repo] DEBUG ## Branches found:
2025-04-20 01:09:43,875 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-04-20 01:09:43,875 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:43,875 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:43,877 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2025-04-20 01:09:43,880 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-20 01:09:43,880 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2025-04-20 01:09:43,883 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2025-04-20 01:09:43,886 [ scc.git] DEBUG Already up to date.
2025-04-20 01:09:43,886 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2025-04-20 01:09:44,196 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2025-04-20 01:09:44,196 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2025-04-20 01:09:44,200 [ scc.git] DEBUG ## Unique users: []
2025-04-20 01:09:44,200 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:44,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:44,203 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-04-20 01:09:44,206 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:44,208 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-04-20 01:09:44,216 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2025-04-20 01:09:44,216 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2025-04-20 01:09:44,216 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-04-20 01:09:44,216 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-04-20 01:09:44,219 [ scc.git] DEBUG Calling 'git reset --hard 8f3c31388de8a7c44f18a6f0e20ea41d35fae041'
2025-04-20 01:09:44,223 [ scc.git] DEBUG HEAD is now at 8f3c313 Merge pull request #17 from jburel/build
2025-04-20 01:09:44,224 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:44,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:09:44,395 [ scc.git] DEBUG Calling 'git merge-base 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-04-20 01:09:44,398 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..8f3c31388de8a7c44f18a6f0e20ea41d35fae041'
2025-04-20 01:09:44,401 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#393](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2025-04-20 01:09:44,403 [ scc.config] DEBUG Found github.token
2025-04-20 01:09:44,403 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2025-04-20 01:09:44,403 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-20 01:09:44,440 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:44,440 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:44,442 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-20 01:09:44,479 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-20 01:09:44,482 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3675223650> has no local changes
2025-04-20 01:09:44,483 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#393 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/)'
2025-04-20 01:09:44,489 [ scc.git] DEBUG [detached HEAD b792685] merge master -Dorg -Ssuccess-only
2025-04-20 01:09:44,489 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:09:44,489 [ scc.repo] DEBUG ## PRs found:
2025-04-20 01:09:44,646 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:44,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2
2025-04-20 01:09:44,826 [ scc.repo] DEBUG ## Branches found:
2025-04-20 01:09:44,826 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-04-20 01:09:44,826 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:44,826 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:44,828 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-04-20 01:09:44,830 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-20 01:09:44,830 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-04-20 01:09:44,833 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-04-20 01:09:44,836 [ scc.git] DEBUG Already up to date.
2025-04-20 01:09:44,836 [ scc.git] DEBUG ## Unique users: []
2025-04-20 01:09:44,836 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:44,836 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:44,838 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-20 01:09:44,875 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:44,875 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:44,877 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-20 01:09:44,915 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-20 01:09:44,918 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f367525e750> has no local changes
2025-04-20 01:09:44,918 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Already up to date.
Generated by OMERO-plugins-push#393 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/)'
2025-04-20 01:09:44,924 [ scc.git] DEBUG [detached HEAD 1ae6baa] merge master -Dorg -Ssuccess-only
2025-04-20 01:09:44,924 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:09:44,924 [ scc.repo] DEBUG ## PRs found:
2025-04-20 01:09:45,077 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:45,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2
2025-04-20 01:09:45,262 [ scc.repo] DEBUG ## Branches found:
2025-04-20 01:09:45,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-04-20 01:09:45,262 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:45,262 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:45,264 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-04-20 01:09:45,267 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-20 01:09:45,267 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-04-20 01:09:45,270 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-04-20 01:09:45,273 [ scc.git] DEBUG Already up to date.
2025-04-20 01:09:45,273 [ scc.git] DEBUG ## Unique users: []
2025-04-20 01:09:45,273 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:45,273 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:45,275 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-20 01:09:45,312 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:45,313 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:45,315 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-20 01:09:45,351 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-20 01:09:45,354 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f367525aa90> has no local changes
2025-04-20 01:09:45,354 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Already up to date.
Generated by OMERO-plugins-push#393 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/)'
2025-04-20 01:09:45,360 [ scc.git] DEBUG [detached HEAD fef1cbd] merge master -Dorg -Ssuccess-only
2025-04-20 01:09:45,361 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:09:45,361 [ scc.repo] DEBUG ## PRs found:
2025-04-20 01:09:45,513 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:45,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2025-04-20 01:09:46,012 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:46,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2025-04-20 01:09:46,480 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:46,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2025-04-20 01:09:46,941 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:47,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-04-20 01:09:47,481 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:47,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-20 01:09:47,931 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:48,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-04-20 01:09:48,459 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:48,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2025-04-20 01:09:48,642 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2025-04-20 01:09:48,642 [ scc.repo] DEBUG ## Branches found:
2025-04-20 01:09:48,642 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-04-20 01:09:48,642 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:48,642 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:48,645 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-04-20 01:09:48,647 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-20 01:09:48,648 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-04-20 01:09:48,650 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-04-20 01:09:48,653 [ scc.git] DEBUG Already up to date.
2025-04-20 01:09:48,653 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2025-04-20 01:09:48,928 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2025-04-20 01:09:48,928 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2025-04-20 01:09:48,932 [ scc.git] DEBUG ## Unique users: []
2025-04-20 01:09:48,932 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:48,932 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:48,934 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-04-20 01:09:48,937 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:48,939 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-04-20 01:09:48,947 [ scc.git] DEBUG Auto-merging Dockerfile
2025-04-20 01:09:48,948 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2025-04-20 01:09:48,948 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-04-20 01:09:48,948 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-04-20 01:09:48,951 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-04-20 01:09:48,956 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2025-04-20 01:09:48,957 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:49,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:09:49,114 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-04-20 01:09:49,116 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-04-20 01:09:49,119 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#393](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2025-04-20 01:09:49,121 [ scc.config] DEBUG Found github.token
2025-04-20 01:09:49,121 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2025-04-20 01:09:49,121 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-20 01:09:49,160 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:49,160 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:49,162 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-20 01:09:49,200 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-20 01:09:49,203 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f36752ab190> has no local changes
2025-04-20 01:09:49,204 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#393 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/)'
2025-04-20 01:09:49,210 [ scc.git] DEBUG [detached HEAD 0634bcc] merge master -Dorg -Ssuccess-only
2025-04-20 01:09:49,210 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:09:49,210 [ scc.git] INFO Overriding base-branch from master to develop
2025-04-20 01:09:49,210 [ scc.repo] DEBUG ## PRs found:
2025-04-20 01:09:49,365 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:49,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2025-04-20 01:09:49,927 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:50,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2025-04-20 01:09:50,413 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:50,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2025-04-20 01:09:50,889 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:51,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-04-20 01:09:51,401 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:51,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-20 01:09:51,870 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:52,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-04-20 01:09:52,368 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:52,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-04-20 01:09:52,810 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:52,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2025-04-20 01:09:52,993 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-04-20 01:09:53,244 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:53,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2025-04-20 01:09:53,719 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:53,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2025-04-20 01:09:54,198 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:54,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-04-20 01:09:54,704 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:54,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-04-20 01:09:55,159 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:55,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-04-20 01:09:55,599 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:55,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2025-04-20 01:09:55,778 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-04-20 01:09:56,029 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:56,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2025-04-20 01:09:56,506 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:56,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2025-04-20 01:09:57,011 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:57,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2025-04-20 01:09:57,491 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:57,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2025-04-20 01:09:57,799 [ scc.repo] DEBUG ## Branches found:
2025-04-20 01:09:57,799 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-04-20 01:09:57,799 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:57,799 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:57,801 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2025-04-20 01:09:57,804 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-04-20 01:09:57,804 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2025-04-20 01:09:57,807 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2025-04-20 01:09:57,814 [ scc.git] DEBUG Updating 4b4c755..950b28b
2025-04-20 01:09:58,049 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:58,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None
2025-04-20 01:09:58,527 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2025-04-20 01:09:58,854 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-04-20 01:09:58,854 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2025-04-20 01:09:58,858 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2025-04-20 01:09:59,121 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-04-20 01:09:59,121 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2025-04-20 01:09:59,125 [ scc.git] DEBUG ## Unique users: []
2025-04-20 01:09:59,125 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:59,125 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:59,128 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-04-20 01:09:59,133 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:59,136 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-04-20 01:09:59,146 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree.
2025-04-20 01:09:59,146 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-04-20 01:09:59,146 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-04-20 01:09:59,149 [ scc.git] DEBUG Calling 'git reset --hard 950b28b31e228ae7b317cbd159235faf4023e4dc'
2025-04-20 01:09:59,153 [ scc.git] DEBUG HEAD is now at 950b28b Merge pull request #225 from will-moore/test_fixes
2025-04-20 01:09:59,154 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:59,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:09:59,311 [ scc.git] DEBUG Calling 'git merge-base 950b28b31e228ae7b317cbd159235faf4023e4dc 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-04-20 01:09:59,316 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..950b28b31e228ae7b317cbd159235faf4023e4dc'
2025-04-20 01:09:59,320 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#393](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2025-04-20 01:09:59,322 [ scc.config] DEBUG Found github.token
2025-04-20 01:09:59,322 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2025-04-20 01:09:59,322 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-04-20 01:09:59,327 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:59,329 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-04-20 01:09:59,338 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-04-20 01:09:59,341 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2025-04-20 01:09:59,341 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2025-04-20 01:09:59,562 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:09:59,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:09:59,719 [ scc.git] DEBUG Calling 'git submodule update'
2025-04-20 01:09:59,757 [ scc.git] DEBUG Get sha1 of %s
2025-04-20 01:09:59,758 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-04-20 01:09:59,760 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-20 01:09:59,796 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-20 01:09:59,799 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f36740e8bd0> has no local changes
2025-04-20 01:09:59,799 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..950b28b
Previously merged:
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#393 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/)'
2025-04-20 01:09:59,806 [ scc.git] DEBUG [detached HEAD ed9d58f] merge master -Dorg -Ssuccess-only
2025-04-20 01:09:59,806 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:09:59,806 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-04-20 01:09:59,879 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2025-04-20 01:09:59,970 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:10:00,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:10:00,158 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2025-04-20 01:10:00,160 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2025-04-20 01:10:00,404 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:10:00,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:10:00,575 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2025-04-20 01:10:00,577 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2025-04-20 01:10:00,821 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:10:00,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:10:00,990 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2025-04-20 01:10:00,992 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2025-04-20 01:10:01,237 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:10:01,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:10:01,446 [ scc.config] DEBUG Found submodule.omero-figure.url
2025-04-20 01:10:01,691 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:10:01,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:10:01,849 [ scc.config] DEBUG Found submodule.omero-figure.branch
2025-04-20 01:10:01,851 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2025-04-20 01:10:02,096 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:10:02,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:10:02,267 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2025-04-20 01:10:02,269 [ scc.config] DEBUG Found submodule.omero-gallery.url
2025-04-20 01:10:02,513 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:10:02,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:10:02,679 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2025-04-20 01:10:02,681 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2025-04-20 01:10:02,926 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:10:03,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:10:03,094 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2025-04-20 01:10:03,096 [ scc.config] DEBUG Found submodule.omero-mapr.url
2025-04-20 01:10:03,341 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:10:03,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:10:03,550 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2025-04-20 01:10:03,552 [ scc.config] DEBUG Found submodule.omero-metadata.url
2025-04-20 01:10:03,796 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:10:03,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:10:03,970 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2025-04-20 01:10:03,972 [ scc.config] DEBUG Found submodule.omero-parade.url
2025-04-20 01:10:04,217 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:10:04,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:10:04,386 [ scc.config] DEBUG Found submodule.omero-parade.branch
2025-04-20 01:10:04,388 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2025-04-20 01:10:04,632 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:10:04,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:10:04,801 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2025-04-20 01:10:04,803 [ scc.config] DEBUG Found submodule.omero-rois.url
2025-04-20 01:10:05,047 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:10:05,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:10:05,218 [ scc.config] DEBUG Found submodule.omero-signup.url
2025-04-20 01:10:05,463 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:10:05,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:10:05,625 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2025-04-20 01:10:05,869 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:10:06,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:10:06,099 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2025-04-20 01:10:06,101 [ scc.config] DEBUG Found submodule.omero-upload.url
2025-04-20 01:10:06,346 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:10:06,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:10:06,512 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2025-04-20 01:10:06,757 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:10:06,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:10:06,925 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2025-04-20 01:10:07,170 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:10:07,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:10:07,345 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2025-04-20 01:10:07,346 [ scc.config] DEBUG Found submodule.omero-weberror.url
2025-04-20 01:10:07,591 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:10:07,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:10:07,762 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2025-04-20 01:10:07,764 [ scc.config] DEBUG Found submodule.omero-webtest.url
2025-04-20 01:10:08,008 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:10:08,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:10:08,198 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2025-04-20 01:10:08,199 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2025-04-20 01:10:08,444 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:10:08,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:10:08,664 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2025-04-20 01:10:08,666 [ scc.config] DEBUG Found submodule.scripts.url
2025-04-20 01:10:08,910 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-04-20 01:10:09,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-04-20 01:10:09,075 [ scc.config] DEBUG Found submodule.scripts.branch
2025-04-20 01:10:09,075 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-04-20 01:10:09,164 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f36785ce890> has local changes
2025-04-20 01:10:09,164 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
- PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
- PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
Repository: ome/minimal-omero-client
Already up to date.
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Repository: ome/omero-cli-render
Excluded PRs:
- PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 69 dominikl 'Fix help text for impo/export commands'
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 171 will-moore 'Initial addition of integration tests' (status: failure)
- PR 170 will-moore 'Use ome zarr models py' (stage: draft)
- PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
- PR 166 will-moore 'Downsample scale option' (stage: draft)
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
Updating 11d3587..7a2c812
Previously merged:
- PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 147 will-moore 'Name option'
Conflicting PRs (not included):
- PR 167 dominikl 'Add extinfo command'
Repository: ome/omero-figure
Excluded PRs:
- PR 619 will-moore 'OME-Zarr support' (stage: draft)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Updating 9cc36cde..4f0362e2
Previously merged:
- PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 600 Rdornier 'Label on rois'
- PR 605 Tom-TBT 'Colorbar feature'
- PR 610 will-moore 'Add docs/contributing.rst'
- PR 612 will-moore 'Script version'
- PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
- PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
- PR 635 dependabot[bot] 'Bump esbuild and vite'
Conflicting PRs (not included):
- PR 616 Rdornier 'Fix labels around border'
- PR 630 will-moore 'Fix color and position for ALL new panel insets'
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
- PR 227 will-moore 'Vectortile investigation' (status: failure)
Already up to date.
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Repository: ome/omero-prometheus-tools
Already up to date.
Repository: ome/omero-rois
Excluded PRs:
- PR 33 jo-mueller 'Add roi to array functions' (user: jo-mueller)
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
- PR 76 will-moore 'Run cli deps'
Repository: ome/omero-upload
Already up to date.
Repository: ome/omero-virtual-microscope
Already up to date.
Merged PRs:
- PR 20 jburel 'Build'
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Already up to date.
Repository: openmicroscopy/omero-webtest
Already up to date.
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..950b28b
Previously merged:
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#393 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/393/)'
2025-04-20 01:10:09,177 [ scc.git] DEBUG [detached HEAD 4490902] merge master -Dorg -Ssuccess-only
2025-04-20 01:10:09,177 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2025-04-20 01:10:09,177 [ scc.merge] INFO Repository: ome/omero-plugins
2025-04-20 01:10:09,177 [ scc.merge] INFO Already up to date.
2025-04-20 01:10:09,177 [ scc.merge] INFO
2025-04-20 01:10:09,177 [ scc.merge] INFO Merged PRs:
2025-04-20 01:10:09,177 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-04-20 01:10:09,177 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-04-20 01:10:09,177 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-04-20 01:10:09,177 [ scc.merge] INFO
2025-04-20 01:10:09,177 [ scc.merge] INFO Repository: ome/minimal-omero-client
2025-04-20 01:10:09,178 [ scc.merge] INFO Already up to date.
2025-04-20 01:10:09,178 [ scc.merge] INFO
2025-04-20 01:10:09,178 [ scc.merge] INFO
2025-04-20 01:10:09,178 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2025-04-20 01:10:09,178 [ scc.merge] INFO Excluded PRs:
2025-04-20 01:10:09,178 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2025-04-20 01:10:09,178 [ scc.merge] INFO Already up to date.
2025-04-20 01:10:09,178 [ scc.merge] INFO
2025-04-20 01:10:09,178 [ scc.merge] INFO
2025-04-20 01:10:09,178 [ scc.merge] INFO Repository: ome/omero-cli-render
2025-04-20 01:10:09,178 [ scc.merge] INFO Excluded PRs:
2025-04-20 01:10:09,178 [ scc.merge] INFO - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
2025-04-20 01:10:09,178 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2025-04-20 01:10:09,178 [ scc.merge] INFO Already up to date.
2025-04-20 01:10:09,178 [ scc.merge] INFO
2025-04-20 01:10:09,178 [ scc.merge] INFO Merged PRs:
2025-04-20 01:10:09,178 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate'
2025-04-20 01:10:09,178 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands'
2025-04-20 01:10:09,178 [ scc.merge] INFO
2025-04-20 01:10:09,178 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2025-04-20 01:10:09,178 [ scc.merge] INFO Excluded PRs:
2025-04-20 01:10:09,178 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' (status: failure)
2025-04-20 01:10:09,178 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft)
2025-04-20 01:10:09,178 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
2025-04-20 01:10:09,178 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft)
2025-04-20 01:10:09,178 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-04-20 01:10:09,178 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
2025-04-20 01:10:09,178 [ scc.merge] INFO Updating 11d3587..7a2c812
2025-04-20 01:10:09,178 [ scc.merge] INFO Previously merged:
2025-04-20 01:10:09,178 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-04-20 01:10:09,178 [ scc.merge] INFO
2025-04-20 01:10:09,178 [ scc.merge] INFO Merged PRs:
2025-04-20 01:10:09,178 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2025-04-20 01:10:09,178 [ scc.merge] INFO
2025-04-20 01:10:09,178 [ scc.merge] INFO Conflicting PRs (not included):
2025-04-20 01:10:09,178 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command'
2025-04-20 01:10:09,178 [ scc.merge] INFO
2025-04-20 01:10:09,178 [ scc.merge] INFO Repository: ome/omero-figure
2025-04-20 01:10:09,178 [ scc.merge] INFO Excluded PRs:
2025-04-20 01:10:09,179 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft)
2025-04-20 01:10:09,179 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment)
2025-04-20 01:10:09,179 [ scc.merge] INFO Updating 9cc36cde..4f0362e2
2025-04-20 01:10:09,179 [ scc.merge] INFO Previously merged:
2025-04-20 01:10:09,179 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-04-20 01:10:09,179 [ scc.merge] INFO
2025-04-20 01:10:09,179 [ scc.merge] INFO Merged PRs:
2025-04-20 01:10:09,179 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois'
2025-04-20 01:10:09,179 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature'
2025-04-20 01:10:09,179 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst'
2025-04-20 01:10:09,179 [ scc.merge] INFO - PR 612 will-moore 'Script version'
2025-04-20 01:10:09,179 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
2025-04-20 01:10:09,179 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
2025-04-20 01:10:09,179 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite'
2025-04-20 01:10:09,179 [ scc.merge] INFO
2025-04-20 01:10:09,179 [ scc.merge] INFO Conflicting PRs (not included):
2025-04-20 01:10:09,179 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border'
2025-04-20 01:10:09,179 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets'
2025-04-20 01:10:09,179 [ scc.merge] INFO
2025-04-20 01:10:09,179 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2025-04-20 01:10:09,179 [ scc.merge] INFO Already up to date.
2025-04-20 01:10:09,179 [ scc.merge] INFO
2025-04-20 01:10:09,179 [ scc.merge] INFO Merged PRs:
2025-04-20 01:10:09,179 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2025-04-20 01:10:09,179 [ scc.merge] INFO
2025-04-20 01:10:09,179 [ scc.merge] INFO Repository: ome/omero-gallery
2025-04-20 01:10:09,179 [ scc.merge] INFO Already up to date.
2025-04-20 01:10:09,179 [ scc.merge] INFO
2025-04-20 01:10:09,179 [ scc.merge] INFO Merged PRs:
2025-04-20 01:10:09,179 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2025-04-20 01:10:09,179 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents'
2025-04-20 01:10:09,179 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2025-04-20 01:10:09,179 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2025-04-20 01:10:09,179 [ scc.merge] INFO
2025-04-20 01:10:09,179 [ scc.merge] INFO Conflicting PRs (not included):
2025-04-20 01:10:09,179 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2025-04-20 01:10:09,179 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2025-04-20 01:10:09,179 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
2025-04-20 01:10:09,180 [ scc.merge] INFO
2025-04-20 01:10:09,180 [ scc.merge] INFO Repository: ome/omero-iviewer
2025-04-20 01:10:09,180 [ scc.merge] INFO Excluded PRs:
2025-04-20 01:10:09,180 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft)
2025-04-20 01:10:09,180 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
2025-04-20 01:10:09,180 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2025-04-20 01:10:09,180 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2025-04-20 01:10:09,180 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure)
2025-04-20 01:10:09,180 [ scc.merge] INFO Already up to date.
2025-04-20 01:10:09,180 [ scc.merge] INFO
2025-04-20 01:10:09,180 [ scc.merge] INFO Merged PRs:
2025-04-20 01:10:09,180 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2025-04-20 01:10:09,180 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2025-04-20 01:10:09,180 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2025-04-20 01:10:09,180 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha'
2025-04-20 01:10:09,180 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-04-20 01:10:09,180 [ scc.merge] INFO
2025-04-20 01:10:09,180 [ scc.merge] INFO Conflicting PRs (not included):
2025-04-20 01:10:09,180 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
2025-04-20 01:10:09,180 [ scc.merge] INFO
2025-04-20 01:10:09,180 [ scc.merge] INFO Repository: ome/omero-mapr
2025-04-20 01:10:09,180 [ scc.merge] INFO Excluded PRs:
2025-04-20 01:10:09,180 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2025-04-20 01:10:09,180 [ scc.merge] INFO Already up to date.
2025-04-20 01:10:09,180 [ scc.merge] INFO
2025-04-20 01:10:09,180 [ scc.merge] INFO Merged PRs:
2025-04-20 01:10:09,180 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2025-04-20 01:10:09,180 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-04-20 01:10:09,180 [ scc.merge] INFO
2025-04-20 01:10:09,180 [ scc.merge] INFO Repository: ome/omero-metadata
2025-04-20 01:10:09,180 [ scc.merge] INFO Updating 3cd120c..55060a2
2025-04-20 01:10:09,180 [ scc.merge] INFO Previously merged:
2025-04-20 01:10:09,180 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-04-20 01:10:09,180 [ scc.merge] INFO
2025-04-20 01:10:09,180 [ scc.merge] INFO Conflicting PRs (not included):
2025-04-20 01:10:09,180 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-04-20 01:10:09,180 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-04-20 01:10:09,180 [ scc.merge] INFO
2025-04-20 01:10:09,180 [ scc.merge] INFO Repository: ome/omero-parade
2025-04-20 01:10:09,181 [ scc.merge] INFO Excluded PRs:
2025-04-20 01:10:09,181 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
2025-04-20 01:10:09,181 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2025-04-20 01:10:09,181 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2025-04-20 01:10:09,181 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2025-04-20 01:10:09,181 [ scc.merge] INFO Already up to date.
2025-04-20 01:10:09,181 [ scc.merge] INFO
2025-04-20 01:10:09,181 [ scc.merge] INFO Merged PRs:
2025-04-20 01:10:09,181 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-04-20 01:10:09,181 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-04-20 01:10:09,181 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-04-20 01:10:09,181 [ scc.merge] INFO
2025-04-20 01:10:09,181 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2025-04-20 01:10:09,181 [ scc.merge] INFO Already up to date.
2025-04-20 01:10:09,181 [ scc.merge] INFO
2025-04-20 01:10:09,181 [ scc.merge] INFO
2025-04-20 01:10:09,181 [ scc.merge] INFO Repository: ome/omero-rois
2025-04-20 01:10:09,181 [ scc.merge] INFO Excluded PRs:
2025-04-20 01:10:09,181 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions' (user: jo-mueller)
2025-04-20 01:10:09,181 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-04-20 01:10:09,181 [ scc.merge] INFO Already up to date.
2025-04-20 01:10:09,181 [ scc.merge] INFO
2025-04-20 01:10:09,181 [ scc.merge] INFO
2025-04-20 01:10:09,181 [ scc.merge] INFO Repository: ome/omero-signup
2025-04-20 01:10:09,181 [ scc.merge] INFO Already up to date.
2025-04-20 01:10:09,181 [ scc.merge] INFO
2025-04-20 01:10:09,181 [ scc.merge] INFO Conflicting PRs (not included):
2025-04-20 01:10:09,181 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2025-04-20 01:10:09,181 [ scc.merge] INFO
2025-04-20 01:10:09,181 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2025-04-20 01:10:09,181 [ scc.merge] INFO Excluded PRs:
2025-04-20 01:10:09,181 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles)
2025-04-20 01:10:09,181 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
2025-04-20 01:10:09,181 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
2025-04-20 01:10:09,181 [ scc.merge] INFO Already up to date.
2025-04-20 01:10:09,181 [ scc.merge] INFO
2025-04-20 01:10:09,181 [ scc.merge] INFO Merged PRs:
2025-04-20 01:10:09,181 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2025-04-20 01:10:09,181 [ scc.merge] INFO - PR 76 will-moore 'Run cli deps'
2025-04-20 01:10:09,181 [ scc.merge] INFO
2025-04-20 01:10:09,182 [ scc.merge] INFO Repository: ome/omero-upload
2025-04-20 01:10:09,182 [ scc.merge] INFO Already up to date.
2025-04-20 01:10:09,182 [ scc.merge] INFO
2025-04-20 01:10:09,182 [ scc.merge] INFO
2025-04-20 01:10:09,182 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2025-04-20 01:10:09,182 [ scc.merge] INFO Already up to date.
2025-04-20 01:10:09,182 [ scc.merge] INFO
2025-04-20 01:10:09,182 [ scc.merge] INFO Merged PRs:
2025-04-20 01:10:09,182 [ scc.merge] INFO - PR 20 jburel 'Build'
2025-04-20 01:10:09,182 [ scc.merge] INFO
2025-04-20 01:10:09,182 [ scc.merge] INFO Repository: ome/omero-web-zarr
2025-04-20 01:10:09,182 [ scc.merge] INFO Excluded PRs:
2025-04-20 01:10:09,182 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure)
2025-04-20 01:10:09,182 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2025-04-20 01:10:09,182 [ scc.merge] INFO Already up to date.
2025-04-20 01:10:09,182 [ scc.merge] INFO
2025-04-20 01:10:09,182 [ scc.merge] INFO Conflicting PRs (not included):
2025-04-20 01:10:09,182 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-04-20 01:10:09,182 [ scc.merge] INFO
2025-04-20 01:10:09,182 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2025-04-20 01:10:09,182 [ scc.merge] INFO Already up to date.
2025-04-20 01:10:09,182 [ scc.merge] INFO
2025-04-20 01:10:09,182 [ scc.merge] INFO
2025-04-20 01:10:09,182 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2025-04-20 01:10:09,182 [ scc.merge] INFO Already up to date.
2025-04-20 01:10:09,182 [ scc.merge] INFO
2025-04-20 01:10:09,182 [ scc.merge] INFO
2025-04-20 01:10:09,182 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2025-04-20 01:10:09,182 [ scc.merge] INFO Already up to date.
2025-04-20 01:10:09,182 [ scc.merge] INFO
2025-04-20 01:10:09,182 [ scc.merge] INFO Conflicting PRs (not included):
2025-04-20 01:10:09,182 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2025-04-20 01:10:09,182 [ scc.merge] INFO
2025-04-20 01:10:09,182 [ scc.merge] INFO Repository: ome/scripts
2025-04-20 01:10:09,182 [ scc.merge] INFO Excluded PRs:
2025-04-20 01:10:09,182 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2025-04-20 01:10:09,182 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2025-04-20 01:10:09,182 [ scc.merge] INFO Updating 4b4c755..950b28b
2025-04-20 01:10:09,182 [ scc.merge] INFO Previously merged:
2025-04-20 01:10:09,182 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests'
2025-04-20 01:10:09,183 [ scc.merge] INFO
2025-04-20 01:10:09,183 [ scc.merge] INFO Merged PRs:
2025-04-20 01:10:09,183 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-04-20 01:10:09,183 [ scc.merge] INFO
2025-04-20 01:10:09,183 [ scc.merge] INFO Conflicting PRs (not included):
2025-04-20 01:10:09,183 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-04-20 01:10:09,183 [ scc.merge] INFO
2025-04-20 01:10:09,183 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-04-20 01:10:09,183 [ scc.git] DEBUG Calling 'git remote'
2025-04-20 01:10:09,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-04-20 01:10:09,185 [ scc.git] DEBUG Calling 'git remote'
2025-04-20 01:10:09,187 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:10:09,187 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-04-20 01:10:09,187 [ scc.git] DEBUG Calling 'git remote'
2025-04-20 01:10:09,189 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:10:09,189 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-04-20 01:10:09,189 [ scc.git] DEBUG Calling 'git remote'
2025-04-20 01:10:09,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:10:09,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-04-20 01:10:09,192 [ scc.git] DEBUG Calling 'git remote'
2025-04-20 01:10:09,194 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:10:09,194 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-04-20 01:10:09,194 [ scc.git] DEBUG Calling 'git remote'
2025-04-20 01:10:09,196 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:10:09,196 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-04-20 01:10:09,196 [ scc.git] DEBUG Calling 'git remote'
2025-04-20 01:10:09,198 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:10:09,198 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-04-20 01:10:09,198 [ scc.git] DEBUG Calling 'git remote'
2025-04-20 01:10:09,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:10:09,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-04-20 01:10:09,200 [ scc.git] DEBUG Calling 'git remote'
2025-04-20 01:10:09,202 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:10:09,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-04-20 01:10:09,203 [ scc.git] DEBUG Calling 'git remote'
2025-04-20 01:10:09,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:10:09,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-04-20 01:10:09,205 [ scc.git] DEBUG Calling 'git remote'
2025-04-20 01:10:09,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:10:09,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-04-20 01:10:09,207 [ scc.git] DEBUG Calling 'git remote'
2025-04-20 01:10:09,209 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:10:09,209 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-04-20 01:10:09,209 [ scc.git] DEBUG Calling 'git remote'
2025-04-20 01:10:09,211 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:10:09,211 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-04-20 01:10:09,211 [ scc.git] DEBUG Calling 'git remote'
2025-04-20 01:10:09,213 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:10:09,213 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-04-20 01:10:09,213 [ scc.git] DEBUG Calling 'git remote'
2025-04-20 01:10:09,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:10:09,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-04-20 01:10:09,215 [ scc.git] DEBUG Calling 'git remote'
2025-04-20 01:10:09,218 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:10:09,218 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-04-20 01:10:09,218 [ scc.git] DEBUG Calling 'git remote'
2025-04-20 01:10:09,220 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:10:09,220 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-04-20 01:10:09,220 [ scc.git] DEBUG Calling 'git remote'
2025-04-20 01:10:09,222 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:10:09,222 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-04-20 01:10:09,222 [ scc.git] DEBUG Calling 'git remote'
2025-04-20 01:10:09,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:10:09,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-04-20 01:10:09,224 [ scc.git] DEBUG Calling 'git remote'
2025-04-20 01:10:09,226 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:10:09,226 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-04-20 01:10:09,226 [ scc.git] DEBUG Calling 'git remote'
2025-04-20 01:10:09,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:10:09,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-04-20 01:10:09,228 [ scc.git] DEBUG Calling 'git remote'
2025-04-20 01:10:09,230 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-04-20 01:10:09,230 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-04-20 01:10:09,231 [ scc.git] DEBUG Calling 'git remote'
2025-04-20 01:10:09,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.10.0 to 5.10.3-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD 8a22e89] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
HEAD detached from 4777ef8
nothing to commit, working tree clean
Entering 'omero-cli-render'
HEAD detached from ce6e13c
nothing to commit, working tree clean
Entering 'omero-cli-zarr'
HEAD detached from 11d3587
Untracked files:
(use "git add <file>..." to include in what will be committed)
.eggs/
nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
HEAD detached from 9cc36cde
nothing to commit, working tree clean
Entering 'omero-fpbioimage'
HEAD detached from 3b6c05a
nothing to commit, working tree clean
Entering 'omero-gallery'
HEAD detached from 2a621da
nothing to commit, working tree clean
Entering 'omero-iviewer'
HEAD detached from 7a798ce
nothing to commit, working tree clean
Entering 'omero-mapr'
HEAD detached from 0a557da
nothing to commit, working tree clean
Entering 'omero-metadata'
HEAD detached from 3cd120c
nothing to commit, working tree clean
Entering 'omero-parade'
HEAD detached from fb5ae86
nothing to commit, working tree clean
Entering 'omero-prometheus-tools'
HEAD detached from eb47378
nothing to commit, working tree clean
Entering 'omero-rois'
HEAD detached from bdfeb5e
nothing to commit, working tree clean
Entering 'omero-signup'
HEAD detached from be76813
nothing to commit, working tree clean
Entering 'omero-test-infra'
HEAD detached from cda3ec6
nothing to commit, working tree clean
Entering 'omero-upload'
HEAD detached from 100f6ae
nothing to commit, working tree clean
Entering 'omero-virtual-microscope'
HEAD detached from deab817
nothing to commit, working tree clean
Entering 'omero-web-zarr'
HEAD detached from 8f3c313
nothing to commit, working tree clean
Entering 'omero-weberror'
HEAD detached from 70b01ed
nothing to commit, working tree clean
Entering 'omero-webtest'
HEAD detached from 5bfef29
nothing to commit, working tree clean
Entering 'rOMERO-gateway'
HEAD detached from 7b5d64d
nothing to commit, working tree clean
Entering 'scripts'
HEAD detached from 4b4c755
nothing to commit, working tree clean
[detached HEAD a2df41b] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-04-20 01:10:56,431 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-04-20 01:11:05,974 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-04-20 01:11:08,624 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-04-20 01:11:13,274 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-04-20 01:11:53,654 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS
![[Jenkins]](/jenkins/static/9bac06d9/images/svgs/logo.svg){kind=logo}
