Started by upstream project "Trigger" build number 62 originally caused by: Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/e9d96de4efbb3e39a2ce24824e54985c7c2760a6ed46c5415ea0aa1fd1e18d41/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.52.0' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 56 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + tar -zxf - + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.2.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.2.1 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.9.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.34.2-py3-none-any.whl.metadata (4.8 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.13.0-py3-none-any.whl.metadata (3.4 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.16.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-50.0.0-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (4.3 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.1.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.5 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.5.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (45 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.19-py3-none-any.whl.metadata (9.2 kB) Collecting certifi>=2023.5.7 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.7.22-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.9.1-py3-none-any.whl (449 kB) Using cached pyjwt-2.13.0-py3-none-any.whl (31 kB) Using cached cryptography-50.0.0-cp311-abi3-manylinux_2_34_x86_64.whl (4.7 MB) Using cached cffi-2.1.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (217 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.34.2-py3-none-any.whl (73 kB) Using cached charset_normalizer-3.5.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (262 kB) Using cached idna-3.19-py3-none-any.whl (68 kB) Using cached certifi-2026.7.22-py3-none-any.whl (136 kB) Using cached typing_extensions-4.16.0-py3-none-any.whl (45 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.0-py3-none-any.whl (48 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.9.1 PyYAML-6.0.3 certifi-2026.7.22 cffi-2.1.1 charset_normalizer-3.5.1 cryptography-50.0.0 future-1.0.0 idna-3.19 pycparser-3.0 pyjwt-2.13.0 pynacl-1.6.2 requests-2.34.2 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.16.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-08-19 09:51:43,109 [ scc.config] DEBUG Found github.token 2026-08-19 09:51:43,110 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-08-19 09:51:43,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:51:43,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:51:44,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-08-19 09:51:44,251 [ scc.gh] DEBUG 4964 remaining from 5000 (Reset at 10:08 2026-08-19 09:51:44,251 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-19 09:51:44,260 [ scc.git] DEBUG Check current status 2026-08-19 09:51:44,260 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-19 09:51:44,281 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-08-19 09:51:44,282 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-19 09:51:44,483 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-08-19 09:51:44,545 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-08-19 09:51:44,600 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-08-19 09:51:44,637 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-08-19 09:51:44,705 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-08-19 09:51:44,740 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-08-19 09:51:44,815 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-08-19 09:51:44,932 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d46) 2026-08-19 09:51:44,970 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-08-19 09:51:45,017 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-08-19 09:51:45,087 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-08-19 09:51:45,132 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-08-19 09:51:45,179 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-08-19 09:51:45,224 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-08-19 09:51:45,293 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-08-19 09:51:45,334 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-08-19 09:51:45,422 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-08-19 09:51:45,481 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-08-19 09:51:45,522 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-08-19 09:51:45,561 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-08-19 09:51:45,600 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-08-19 09:51:45,623 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-08-19 09:51:45,633 [ scc.config] DEBUG Found remote.origin.url 2026-08-19 09:51:45,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-08-19 09:51:46,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-19 09:51:46,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-19 09:51:47,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-19 09:51:47,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-19 09:51:47,875 [ scc.git] DEBUG Resetting... 2026-08-19 09:51:47,875 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-08-19 09:51:48,151 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-08-19 09:51:48,152 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-08-19 09:51:49,296 [ scc.git] DEBUG Check current status 2026-08-19 09:51:49,296 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-19 09:51:49,314 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-08-19 09:51:49,315 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-19 09:51:49,502 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-08-19 09:51:49,539 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-08-19 09:51:49,577 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-08-19 09:51:49,624 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-08-19 09:51:49,662 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-08-19 09:51:49,692 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-08-19 09:51:49,724 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-08-19 09:51:49,780 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d46) 2026-08-19 09:51:49,815 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-08-19 09:51:49,860 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-08-19 09:51:49,898 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-08-19 09:51:49,939 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-08-19 09:51:49,974 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-08-19 09:51:50,005 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-08-19 09:51:50,039 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-08-19 09:51:50,070 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-08-19 09:51:50,105 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-08-19 09:51:50,156 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-08-19 09:51:50,193 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-08-19 09:51:50,239 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-08-19 09:51:50,278 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-08-19 09:51:50,298 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-08-19 09:51:50,299 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-08-19 09:51:50,299 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-08-19 09:51:50,299 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-08-19 09:51:50,299 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-08-19 09:51:50,299 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-08-19 09:51:50,299 [ scc.repo] DEBUG ## PRs found: 2026-08-19 09:51:50,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-08-19 09:51:51,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-08-19 09:51:51,136 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-19 09:51:51,137 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-08-19 09:51:51,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-08-19 09:51:51,653 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-19 09:51:51,653 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-08-19 09:51:52,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-08-19 09:51:52,167 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-19 09:51:52,168 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-08-19 09:51:52,168 [ scc.repo] DEBUG ## Branches found: 2026-08-19 09:51:52,168 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:51:52,168 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:51:52,179 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-19 09:51:52,195 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-19 09:51:52,195 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-19 09:51:52,211 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-19 09:51:52,254 [ scc.git] DEBUG Already up to date. 2026-08-19 09:51:52,255 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-08-19 09:51:52,759 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-19 09:51:52,759 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-08-19 09:51:52,788 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-08-19 09:51:53,243 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-19 09:51:53,243 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-08-19 09:51:53,265 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-08-19 09:51:53,760 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-19 09:51:53,761 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-08-19 09:51:53,789 [ scc.git] DEBUG ## Unique users: [] 2026-08-19 09:51:53,790 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:51:53,790 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:51:53,802 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-08-19 09:51:53,824 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:51:53,834 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-08-19 09:51:54,420 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:51:54,479 [ scc.git] DEBUG scripts | 2 +- 2026-08-19 09:51:54,479 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-19 09:51:54,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:51:54,675 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-08-19 09:51:54,708 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:51:54,718 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-08-19 09:51:55,321 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:51:55,387 [ scc.git] DEBUG omero-figure | 2 +- 2026-08-19 09:51:55,387 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-19 09:51:55,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:51:55,621 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-08-19 09:51:55,661 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:51:55,671 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-08-19 09:51:56,352 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:51:56,415 [ scc.git] DEBUG omero-iviewer | 2 +- 2026-08-19 09:51:56,415 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-19 09:51:56,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:51:56,621 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-19 09:51:57,413 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-08-19 09:51:58,319 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-08-19 09:51:58,607 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-08-19 09:51:58,608 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:51:58,608 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:51:58,618 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-19 09:52:00,744 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4a9853df10> has no local changes 2026-08-19 09:52:00,744 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#46 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-08-19 09:52:01,941 [ scc.git] DEBUG [detached HEAD 9aab47c] merge master -Dorg -Snone 2026-08-19 09:52:01,942 [ scc.merge] INFO Repository: ome/omero-plugins 2026-08-19 09:52:01,942 [ scc.merge] INFO Already up to date. 2026-08-19 09:52:01,942 [ scc.merge] INFO 2026-08-19 09:52:01,942 [ scc.merge] INFO Merged PRs: 2026-08-19 09:52:01,942 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-08-19 09:52:01,942 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-08-19 09:52:01,942 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-08-19 09:52:01,942 [ scc.merge] INFO 2026-08-19 09:52:01,942 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-08-19 09:52:01,943 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' Submodule path 'omero-cli-zarr': checked out '9f844b877d8e19e42a69d7ba43f7dc086680fbec' Submodule path 'omero-figure': checked out '81f95f4400b3cda77eae8fa9ea94071a1253a876' Submodule path 'omero-iviewer': checked out '3af5a3461d5bbae51d9026388abf0139a32474ea' Submodule path 'omero-metadata': checked out '6a653e49e3589ccb463166506896639f6f0a5a2b' Submodule path 'omero-rois': checked out 'fc9ff96901ce7b92e3ba51327ba7ba64fff76959' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2026-08-19 09:52:23,636 [ scc.config] DEBUG Found github.token 2026-08-19 09:52:23,638 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-08-19 09:52:23,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:52:24,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:52:24,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-08-19 09:52:24,779 [ scc.gh] DEBUG 4964 remaining from 5000 (Reset at 10:08 2026-08-19 09:52:24,779 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-19 09:52:24,796 [ scc.git] DEBUG Check current status 2026-08-19 09:52:24,796 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-19 09:52:24,816 [ scc.git] DEBUG 9aab47c merge master -Dorg -Snone 2026-08-19 09:52:24,817 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-19 09:52:25,012 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-08-19 09:52:25,058 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-08-19 09:52:25,092 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2026-08-19 09:52:25,140 [ scc.git] DEBUG +9f844b877d8e19e42a69d7ba43f7dc086680fbec omero-cli-zarr (v0.8.0-1-g9f844b8) 2026-08-19 09:52:25,219 [ scc.git] DEBUG +81f95f4400b3cda77eae8fa9ea94071a1253a876 omero-figure (v8.0.1.rc2-26-g81f95f44) 2026-08-19 09:52:25,251 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-08-19 09:52:25,284 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-08-19 09:52:25,367 [ scc.git] DEBUG +3af5a3461d5bbae51d9026388abf0139a32474ea omero-iviewer (v0.18.0-7-g3af5a346) 2026-08-19 09:52:25,406 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-08-19 09:52:25,454 [ scc.git] DEBUG +6a653e49e3589ccb463166506896639f6f0a5a2b omero-metadata (v0.14.0-2-g6a653e4) 2026-08-19 09:52:25,487 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-08-19 09:52:25,516 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-08-19 09:52:25,550 [ scc.git] DEBUG +fc9ff96901ce7b92e3ba51327ba7ba64fff76959 omero-rois (v0.4.1-1-gfc9ff96) 2026-08-19 09:52:25,585 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-08-19 09:52:25,621 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2026-08-19 09:52:25,668 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-08-19 09:52:25,706 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2026-08-19 09:52:25,736 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2026-08-19 09:52:25,767 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-08-19 09:52:25,801 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-08-19 09:52:25,838 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-08-19 09:52:25,861 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 scripts (v5.10.0-1-g5b4d768) 2026-08-19 09:52:25,871 [ scc.config] DEBUG Found remote.origin.url 2026-08-19 09:52:25,871 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-08-19 09:52:25,874 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2026-08-19 09:52:26,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-08-19 09:52:26,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-19 09:52:27,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-19 09:52:27,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-19 09:52:28,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-19 09:52:28,274 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:52:28,452 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-08-19 09:52:28,452 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-19 09:52:28,469 [ scc.git] DEBUG Check current status 2026-08-19 09:52:28,469 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-19 09:52:28,488 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2026-08-19 09:52:28,489 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-19 09:52:28,606 [ scc.config] DEBUG Found remote.origin.url 2026-08-19 09:52:28,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2026-08-19 09:52:29,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-19 09:52:29,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-19 09:52:30,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-19 09:52:30,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-19 09:52:30,918 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:52:31,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:52:31,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-08-19 09:52:31,027 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-19 09:52:31,040 [ scc.git] DEBUG Check current status 2026-08-19 09:52:31,040 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-19 09:52:31,061 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2026-08-19 09:52:31,062 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-19 09:52:31,165 [ scc.config] DEBUG Found remote.origin.url 2026-08-19 09:52:31,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2026-08-19 09:52:31,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-19 09:52:32,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-19 09:52:32,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-19 09:52:33,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-19 09:52:33,406 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:52:33,519 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:52:33,519 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-08-19 09:52:33,519 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-19 09:52:33,531 [ scc.git] DEBUG Check current status 2026-08-19 09:52:33,531 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-19 09:52:33,553 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2026-08-19 09:52:33,554 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-19 09:52:33,657 [ scc.config] DEBUG Found remote.origin.url 2026-08-19 09:52:33,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2026-08-19 09:52:34,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-19 09:52:34,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-19 09:52:35,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-19 09:52:35,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-19 09:52:35,844 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:52:35,960 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:52:35,960 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-08-19 09:52:35,960 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-19 09:52:35,974 [ scc.git] DEBUG Check current status 2026-08-19 09:52:35,974 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-19 09:52:35,996 [ scc.git] DEBUG 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-08-19 09:52:35,997 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-19 09:52:36,110 [ scc.config] DEBUG Found remote.origin.url 2026-08-19 09:52:36,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2026-08-19 09:52:36,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-19 09:52:37,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-19 09:52:37,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-19 09:52:38,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-19 09:52:38,387 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:52:38,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:52:38,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-08-19 09:52:38,488 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-19 09:52:38,501 [ scc.git] DEBUG Check current status 2026-08-19 09:52:38,501 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-19 09:52:38,526 [ scc.git] DEBUG 81f95f44 Merge pull request #700 from will-moore/export_script_zoom_level_fix 2026-08-19 09:52:38,526 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-19 09:52:38,637 [ scc.config] DEBUG Found remote.origin.url 2026-08-19 09:52:38,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2026-08-19 09:52:39,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-19 09:52:39,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-19 09:52:40,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-19 09:52:40,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-19 09:52:40,869 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:52:40,979 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:52:40,979 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-08-19 09:52:40,979 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-19 09:52:40,994 [ scc.git] DEBUG Check current status 2026-08-19 09:52:40,994 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-19 09:52:41,013 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2026-08-19 09:52:41,014 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-19 09:52:41,115 [ scc.config] DEBUG Found remote.origin.url 2026-08-19 09:52:41,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2026-08-19 09:52:41,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-19 09:52:42,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-19 09:52:42,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-19 09:52:43,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-19 09:52:43,435 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:52:43,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:52:43,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-08-19 09:52:43,526 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-19 09:52:43,537 [ scc.git] DEBUG Check current status 2026-08-19 09:52:43,537 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-19 09:52:43,555 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2026-08-19 09:52:43,556 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-19 09:52:43,658 [ scc.config] DEBUG Found remote.origin.url 2026-08-19 09:52:44,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2026-08-19 09:52:44,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-19 09:52:45,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-19 09:52:45,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-19 09:52:46,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-19 09:52:51,658 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:52:51,758 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:52:51,758 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-08-19 09:52:51,759 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-19 09:52:51,771 [ scc.git] DEBUG Check current status 2026-08-19 09:52:51,771 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-19 09:52:51,797 [ scc.git] DEBUG 3af5a346 Merge pull request #559 from ome/dependabot/npm_and_yarn/multi-392a5e4999 2026-08-19 09:52:51,799 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-19 09:52:51,912 [ scc.config] DEBUG Found remote.origin.url 2026-08-19 09:52:52,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2026-08-19 09:52:52,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-19 09:52:53,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-19 09:52:53,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-19 09:52:54,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-19 09:52:54,157 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:52:54,261 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:52:54,261 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-08-19 09:52:54,261 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-19 09:52:54,275 [ scc.git] DEBUG Check current status 2026-08-19 09:52:54,275 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-19 09:52:54,294 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2026-08-19 09:52:54,295 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-19 09:52:54,409 [ scc.config] DEBUG Found remote.origin.url 2026-08-19 09:52:54,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2026-08-19 09:52:55,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-19 09:52:55,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-19 09:52:56,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-19 09:52:56,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-19 09:52:56,630 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:52:59,646 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:52:59,646 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-08-19 09:52:59,646 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-19 09:52:59,660 [ scc.git] DEBUG Check current status 2026-08-19 09:52:59,660 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-19 09:52:59,682 [ scc.git] DEBUG 6a653e4 Fix workflow permission indentation 2026-08-19 09:52:59,683 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-19 09:52:59,791 [ scc.config] DEBUG Found remote.origin.url 2026-08-19 09:53:00,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2026-08-19 09:53:00,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-19 09:53:01,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-19 09:53:01,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-19 09:53:02,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-19 09:53:02,069 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:53:02,172 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:53:02,172 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-08-19 09:53:02,173 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-19 09:53:02,187 [ scc.git] DEBUG Check current status 2026-08-19 09:53:02,187 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-19 09:53:02,205 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2026-08-19 09:53:02,206 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-19 09:53:02,320 [ scc.config] DEBUG Found remote.origin.url 2026-08-19 09:53:02,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2026-08-19 09:53:03,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-19 09:53:03,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-19 09:53:04,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-19 09:53:04,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-19 09:53:04,528 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:53:04,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:53:04,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-08-19 09:53:04,633 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-19 09:53:04,647 [ scc.git] DEBUG Check current status 2026-08-19 09:53:04,647 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-19 09:53:04,669 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2026-08-19 09:53:04,670 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-19 09:53:04,786 [ scc.config] DEBUG Found remote.origin.url 2026-08-19 09:53:05,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2026-08-19 09:53:05,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-19 09:53:06,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-19 09:53:06,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-19 09:53:08,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-19 09:53:08,555 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:53:08,657 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:53:08,657 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-08-19 09:53:08,658 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-19 09:53:08,671 [ scc.git] DEBUG Check current status 2026-08-19 09:53:08,672 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-19 09:53:08,690 [ scc.git] DEBUG fc9ff96 Bump version: 0.4.1 → 0.4.2.dev0 2026-08-19 09:53:08,691 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-19 09:53:08,807 [ scc.config] DEBUG Found remote.origin.url 2026-08-19 09:53:09,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2026-08-19 09:53:09,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-19 09:53:10,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-19 09:53:10,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-19 09:53:11,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-19 09:53:11,192 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:53:11,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:53:11,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-08-19 09:53:11,290 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-19 09:53:11,314 [ scc.git] DEBUG Check current status 2026-08-19 09:53:11,314 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-19 09:53:11,332 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2026-08-19 09:53:11,333 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-19 09:53:11,437 [ scc.config] DEBUG Found remote.origin.url 2026-08-19 09:53:11,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2026-08-19 09:53:12,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-19 09:53:12,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-19 09:53:13,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-19 09:53:13,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-19 09:53:13,710 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:53:13,811 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:53:13,812 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-08-19 09:53:13,812 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-19 09:53:13,824 [ scc.git] DEBUG Check current status 2026-08-19 09:53:13,824 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-19 09:53:13,841 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2026-08-19 09:53:13,842 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-19 09:53:13,954 [ scc.config] DEBUG Found remote.origin.url 2026-08-19 09:53:14,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-08-19 09:53:14,164 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-08-19 09:53:14,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2026-08-19 09:53:14,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-19 09:53:15,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-19 09:53:15,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-19 09:53:16,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-19 09:53:16,363 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:53:16,459 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:53:16,460 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-08-19 09:53:16,460 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-19 09:53:16,472 [ scc.git] DEBUG Check current status 2026-08-19 09:53:16,472 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-19 09:53:16,487 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2026-08-19 09:53:16,488 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-19 09:53:16,595 [ scc.config] DEBUG Found remote.origin.url 2026-08-19 09:53:16,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2026-08-19 09:53:17,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-19 09:53:17,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-19 09:53:18,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-19 09:53:18,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-19 09:53:18,851 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:53:18,951 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:53:18,952 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-08-19 09:53:18,953 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-19 09:53:18,967 [ scc.git] DEBUG Check current status 2026-08-19 09:53:18,967 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-19 09:53:18,992 [ scc.git] DEBUG 160d894 Fix display of code 2026-08-19 09:53:18,993 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-19 09:53:19,099 [ scc.config] DEBUG Found remote.origin.url 2026-08-19 09:53:19,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2026-08-19 09:53:19,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-19 09:53:20,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-19 09:53:20,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-19 09:53:21,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-19 09:53:21,316 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:53:21,434 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:53:21,435 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-08-19 09:53:21,436 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-19 09:53:21,452 [ scc.git] DEBUG Check current status 2026-08-19 09:53:21,452 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-19 09:53:21,474 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-08-19 09:53:21,475 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-19 09:53:21,590 [ scc.config] DEBUG Found remote.origin.url 2026-08-19 09:53:21,591 [ scc.git] DEBUG Repository configuration: base-branch: main 2026-08-19 09:53:21,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2026-08-19 09:53:22,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-19 09:53:22,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-19 09:53:23,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-19 09:53:23,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-19 09:53:23,783 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:53:23,892 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:53:23,892 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-08-19 09:53:23,893 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-19 09:53:23,910 [ scc.git] DEBUG Check current status 2026-08-19 09:53:23,911 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-19 09:53:23,930 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2026-08-19 09:53:23,931 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-19 09:53:24,051 [ scc.config] DEBUG Found remote.origin.url 2026-08-19 09:53:24,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-08-19 09:53:24,261 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-08-19 09:53:24,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2026-08-19 09:53:25,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-19 09:53:25,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-19 09:53:25,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-19 09:53:26,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-19 09:53:26,437 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:53:26,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:53:26,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-08-19 09:53:26,550 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-19 09:53:26,567 [ scc.git] DEBUG Check current status 2026-08-19 09:53:26,567 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-19 09:53:26,593 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2026-08-19 09:53:26,594 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-19 09:53:26,706 [ scc.config] DEBUG Found remote.origin.url 2026-08-19 09:53:26,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-08-19 09:53:26,923 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-08-19 09:53:27,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2026-08-19 09:53:27,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-19 09:53:28,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-19 09:53:28,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-19 09:53:29,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-19 09:53:29,200 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:53:29,326 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:53:29,327 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-08-19 09:53:29,328 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-19 09:53:29,350 [ scc.git] DEBUG Check current status 2026-08-19 09:53:29,351 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-19 09:53:29,385 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2026-08-19 09:53:29,386 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-19 09:53:29,511 [ scc.config] DEBUG Found remote.origin.url 2026-08-19 09:53:29,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2026-08-19 09:53:30,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-19 09:53:30,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-19 09:53:31,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-19 09:53:31,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-19 09:53:31,690 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:53:31,799 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:53:31,799 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-08-19 09:53:31,800 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-19 09:53:31,818 [ scc.git] DEBUG Check current status 2026-08-19 09:53:31,818 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-19 09:53:31,846 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0 2026-08-19 09:53:31,847 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-19 09:53:31,969 [ scc.config] DEBUG Found remote.origin.url 2026-08-19 09:53:31,969 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-08-19 09:53:32,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-08-19 09:53:32,200 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-08-19 09:53:32,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2026-08-19 09:53:33,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-19 09:53:33,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-19 09:53:33,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-19 09:53:34,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-19 09:53:34,437 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:53:34,562 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:53:34,562 [ scc.git] DEBUG Resetting... 2026-08-19 09:53:34,562 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-08-19 09:53:34,924 [ scc.git] DEBUG HEAD is now at 9aab47c merge master -Dorg -Snone 2026-08-19 09:53:34,925 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-08-19 09:53:35,338 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2026-08-19 09:53:35,716 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2026-08-19 09:53:36,960 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-08-19 09:53:37,939 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-08-19 09:53:38,302 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2026-08-19 09:53:38,654 [ scc.git] DEBUG Submodule path 'omero-rois': checked out 'bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9' 2026-08-19 09:53:38,952 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2026-08-19 09:53:39,270 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2026-08-19 09:53:39,487 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2026-08-19 09:53:39,946 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-08-19 09:53:39,967 [ scc.git] DEBUG Check current status 2026-08-19 09:53:39,967 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-19 09:53:39,991 [ scc.git] DEBUG 9aab47c merge master -Dorg -Snone 2026-08-19 09:53:39,992 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-19 09:53:40,157 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-08-19 09:53:40,185 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-08-19 09:53:40,215 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-08-19 09:53:40,245 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-08-19 09:53:40,283 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2026-08-19 09:53:40,315 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-08-19 09:53:40,345 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-08-19 09:53:40,398 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798cee) 2026-08-19 09:53:40,433 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-08-19 09:53:40,472 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-08-19 09:53:40,506 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-08-19 09:53:40,537 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-08-19 09:53:40,569 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-08-19 09:53:40,601 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-08-19 09:53:40,633 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-08-19 09:53:40,665 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-08-19 09:53:40,699 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-08-19 09:53:40,734 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-08-19 09:53:40,765 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-08-19 09:53:40,798 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-08-19 09:53:40,831 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-08-19 09:53:40,854 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2026-08-19 09:53:40,855 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-08-19 09:53:40,855 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-08-19 09:53:40,855 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-08-19 09:53:40,855 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-08-19 09:53:40,855 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-08-19 09:53:40,855 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-08-19 09:53:40,855 [ scc.repo] DEBUG ## PRs found: 2026-08-19 09:53:41,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-08-19 09:53:41,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-08-19 09:53:41,741 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-19 09:53:42,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-08-19 09:53:42,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:53:43,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-08-19 09:53:43,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:53:43,946 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-08-19 09:53:44,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-08-19 09:53:44,460 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-19 09:53:45,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-08-19 09:53:45,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:53:46,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-08-19 09:53:46,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:53:46,663 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-08-19 09:53:47,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-08-19 09:53:47,161 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-19 09:53:47,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-08-19 09:53:48,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:53:48,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-08-19 09:53:49,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:53:49,381 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-08-19 09:53:49,381 [ scc.repo] DEBUG ## Branches found: 2026-08-19 09:53:49,382 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:53:49,382 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:53:49,395 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-19 09:53:49,412 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-19 09:53:49,412 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-19 09:53:49,451 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-19 09:53:49,513 [ scc.git] DEBUG Already up to date. 2026-08-19 09:53:49,513 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-08-19 09:53:50,023 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-19 09:53:50,024 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-08-19 09:53:50,048 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-08-19 09:53:50,487 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-19 09:53:50,487 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-08-19 09:53:50,508 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-08-19 09:53:50,993 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-19 09:53:50,993 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-08-19 09:53:51,019 [ scc.git] DEBUG ## Unique users: [] 2026-08-19 09:53:51,019 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:53:51,019 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:53:51,028 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-08-19 09:53:51,047 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:53:51,058 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-08-19 09:53:51,114 [ scc.git] DEBUG Already up to date. 2026-08-19 09:53:51,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:53:51,309 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-08-19 09:53:51,334 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:53:51,344 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-08-19 09:53:51,392 [ scc.git] DEBUG Already up to date. 2026-08-19 09:53:51,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:53:51,744 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-08-19 09:53:51,769 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:53:51,778 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-08-19 09:53:51,830 [ scc.git] DEBUG Already up to date. 2026-08-19 09:53:52,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:53:52,182 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-19 09:53:52,988 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:53:52,988 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:53:52,998 [ scc.repo] DEBUG ## PRs found: 2026-08-19 09:53:53,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2026-08-19 09:53:53,220 [ scc.repo] DEBUG ## Branches found: 2026-08-19 09:53:53,220 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-08-19 09:53:53,220 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:53:53,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:53:53,235 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-19 09:53:53,249 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-19 09:53:53,249 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-19 09:53:53,269 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-19 09:53:53,322 [ scc.git] DEBUG Already up to date. 2026-08-19 09:53:53,323 [ scc.git] DEBUG ## Unique users: [] 2026-08-19 09:53:53,323 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:53:53,323 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:53:53,341 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-19 09:53:53,449 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:53:53,449 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:53:53,461 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:53:53,564 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-19 09:53:53,624 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa90c637d0> has no local changes 2026-08-19 09:53:53,624 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#46 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-08-19 09:53:53,765 [ scc.git] DEBUG [detached HEAD 4f89dc1] merge master -Dorg -Ssuccess-only 2026-08-19 09:53:53,767 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:53:53,768 [ scc.repo] DEBUG ## PRs found: 2026-08-19 09:53:54,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2026-08-19 09:53:54,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2026-08-19 09:53:54,605 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-19 09:53:55,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-08-19 09:53:55,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:53:56,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-19 09:53:56,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-08-19 09:53:57,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:53:57,367 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-19 09:53:57,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2026-08-19 09:53:58,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2026-08-19 09:53:58,383 [ scc.repo] DEBUG ## Branches found: 2026-08-19 09:53:58,383 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-08-19 09:53:58,383 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:53:58,383 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:53:58,418 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-19 09:53:58,437 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-19 09:53:58,437 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-19 09:53:58,457 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-19 09:53:58,515 [ scc.git] DEBUG Already up to date. 2026-08-19 09:53:58,515 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2026-08-19 09:53:59,003 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2026-08-19 09:53:59,003 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2026-08-19 09:53:59,040 [ scc.git] DEBUG ## Unique users: [] 2026-08-19 09:53:59,040 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:53:59,040 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:53:59,056 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-08-19 09:53:59,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:53:59,090 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-08-19 09:53:59,289 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:53:59,347 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-19 09:53:59,347 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-19 09:53:59,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:53:59,550 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-19 09:53:59,653 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:53:59,653 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:53:59,667 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:53:59,760 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-19 09:53:59,809 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa90afa3d0> has no local changes 2026-08-19 09:53:59,809 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#46 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-08-19 09:53:59,972 [ scc.git] DEBUG [detached HEAD c68dc6a] merge master -Dorg -Ssuccess-only 2026-08-19 09:53:59,973 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:53:59,974 [ scc.repo] DEBUG ## PRs found: 2026-08-19 09:54:00,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2026-08-19 09:54:00,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2026-08-19 09:54:01,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2026-08-19 09:54:02,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-08-19 09:54:02,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:54:03,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-19 09:54:03,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-08-19 09:54:04,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:54:04,271 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2026-08-19 09:54:04,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2026-08-19 09:54:05,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2026-08-19 09:54:05,302 [ scc.repo] DEBUG ## Branches found: 2026-08-19 09:54:05,302 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-08-19 09:54:05,302 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:54:05,302 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:54:05,318 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-19 09:54:05,332 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-19 09:54:05,332 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-19 09:54:05,354 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-19 09:54:05,501 [ scc.git] DEBUG Updating ce6e13c..68b7303 2026-08-19 09:54:06,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2026-08-19 09:54:07,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2026-08-19 09:54:07,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2026-08-19 09:54:08,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2026-08-19 09:54:08,662 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2026-08-19 09:54:09,374 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2026-08-19 09:54:09,374 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2026-08-19 09:54:09,398 [ scc.git] DEBUG ## Unique users: [] 2026-08-19 09:54:09,398 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:54:09,398 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:54:09,411 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-08-19 09:54:09,451 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:54:09,465 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-08-19 09:54:09,649 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2026-08-19 09:54:09,708 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:54:09,780 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2026-08-19 09:54:09,780 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2026-08-19 09:54:09,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:54:09,990 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-19 09:54:10,104 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:54:10,104 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:54:10,119 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:54:10,231 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-19 09:54:10,316 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa90c87ad0> has no local changes 2026-08-19 09:54:10,316 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#46 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-08-19 09:54:10,496 [ scc.git] DEBUG [detached HEAD d659459] merge master -Dorg -Ssuccess-only 2026-08-19 09:54:10,498 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:54:10,499 [ scc.repo] DEBUG ## PRs found: 2026-08-19 09:54:10,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2026-08-19 09:54:11,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/196 HTTP/1.1" 200 None 2026-08-19 09:54:12,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f?page=1 HTTP/1.1" 200 None 2026-08-19 09:54:12,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:54:13,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-19 09:54:13,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f?page=1 HTTP/1.1" 200 None 2026-08-19 09:54:14,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/eeaeaa9e3789fce6809def20cd9a43f37f61668f?per_page=1 HTTP/1.1" 200 None 2026-08-19 09:54:14,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f?page=1 HTTP/1.1" 200 None 2026-08-19 09:54:15,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f/status HTTP/1.1" 200 None 2026-08-19 09:54:15,247 [ scc.repo] DEBUG - PR 196 will-moore 'Storage options only if needed' 2026-08-19 09:54:15,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/194 HTTP/1.1" 200 None 2026-08-19 09:54:16,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b?page=1 HTTP/1.1" 200 None 2026-08-19 09:54:16,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:54:17,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-19 09:54:18,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/193 HTTP/1.1" 200 None 2026-08-19 09:54:18,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-08-19 09:54:19,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:54:19,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-19 09:54:20,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-08-19 09:54:20,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?per_page=1 HTTP/1.1" 200 None 2026-08-19 09:54:21,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-08-19 09:54:21,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/status HTTP/1.1" 200 None 2026-08-19 09:54:21,680 [ scc.repo] DEBUG - PR 193 dominikl 'Only parse import uris if stated' 2026-08-19 09:54:22,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2026-08-19 09:54:22,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2026-08-19 09:54:23,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-08-19 09:54:23,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:54:24,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-19 09:54:24,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-08-19 09:54:25,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None 2026-08-19 09:54:25,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-08-19 09:54:26,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None 2026-08-19 09:54:26,271 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-08-19 09:54:26,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2026-08-19 09:54:27,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2026-08-19 09:54:27,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2026-08-19 09:54:28,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2026-08-19 09:54:28,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-08-19 09:54:29,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:54:29,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-19 09:54:30,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-08-19 09:54:30,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f99a6a6869bf6259376adaea157f24955c9aa3ae?per_page=1 HTTP/1.1" 200 None 2026-08-19 09:54:31,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-08-19 09:54:31,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/status HTTP/1.1" 200 None 2026-08-19 09:54:31,847 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-08-19 09:54:32,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2026-08-19 09:54:32,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2026-08-19 09:54:33,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-08-19 09:54:34,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:54:34,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-19 09:54:35,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-08-19 09:54:35,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2026-08-19 09:54:36,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-08-19 09:54:36,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2026-08-19 09:54:36,671 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2026-08-19 09:54:37,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2026-08-19 09:54:37,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2026-08-19 09:54:38,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2026-08-19 09:54:38,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2026-08-19 09:54:39,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2026-08-19 09:54:39,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2026-08-19 09:54:39,818 [ scc.repo] DEBUG ## Branches found: 2026-08-19 09:54:39,818 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-08-19 09:54:39,819 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:54:39,819 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:54:39,837 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-19 09:54:39,855 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-19 09:54:39,855 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-19 09:54:40,119 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-19 09:54:40,451 [ scc.git] DEBUG Updating 11d3587..9f844b8 2026-08-19 09:54:41,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/172 HTTP/1.1" 200 None 2026-08-19 09:54:41,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/192 HTTP/1.1" 200 None 2026-08-19 09:54:42,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/186 HTTP/1.1" 200 None 2026-08-19 09:54:43,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/187 HTTP/1.1" 200 None 2026-08-19 09:54:44,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2026-08-19 09:54:45,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2026-08-19 09:54:46,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2026-08-19 09:54:47,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2026-08-19 09:54:47,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2026-08-19 09:54:48,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2026-08-19 09:54:49,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2026-08-19 09:54:50,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2026-08-19 09:54:50,448 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2026-08-19 09:54:51,282 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-08-19 09:54:51,282 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2026-08-19 09:54:51,304 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2026-08-19 09:54:51,859 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-08-19 09:54:51,859 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2026-08-19 09:54:51,880 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2026-08-19 09:54:52,411 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-08-19 09:54:52,411 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2026-08-19 09:54:52,433 [ scc.git] DEBUG Calling 'git fetch origin pull/193/head' 2026-08-19 09:54:52,907 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-08-19 09:54:52,907 [ scc.git] DEBUG * branch refs/pull/193/head -> FETCH_HEAD 2026-08-19 09:54:52,932 [ scc.git] DEBUG Calling 'git fetch origin pull/196/head' 2026-08-19 09:54:53,551 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-08-19 09:54:53,552 [ scc.git] DEBUG * branch refs/pull/196/head -> FETCH_HEAD 2026-08-19 09:54:53,574 [ scc.git] DEBUG ## Unique users: [] 2026-08-19 09:54:53,574 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:54:53,574 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:54:53,586 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-08-19 09:54:53,638 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:54:53,655 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-08-19 09:54:54,127 [ scc.git] DEBUG Auto-merging README.rst 2026-08-19 09:54:54,127 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-08-19 09:54:54,127 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py 2026-08-19 09:54:54,127 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-08-19 09:54:54,127 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-08-19 09:54:54,127 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2026-08-19 09:54:54,127 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2026-08-19 09:54:54,127 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2026-08-19 09:54:54,127 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py 2026-08-19 09:54:54,127 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-08-19 09:54:54,127 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-08-19 09:54:54,154 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-19 09:54:54,155 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-19 09:54:54,186 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-19 09:54:54,371 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-08-19 09:54:54,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:54:54,576 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-08-19 09:54:54,612 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-19 09:54:54,633 [ scc.git] INFO - PR 174 will-moore 'Skip wells' Conflicting PR. Removed from build [OMERO-plugins-push#46](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/util.py - src/omero_zarr/masks.py - src/omero_zarr/cli.py - src/omero_zarr/raw_pixels.py - test/integration/clitest/test_export.py --conflicts 2026-08-19 09:54:54,643 [ scc.config] DEBUG Found github.token 2026-08-19 09:54:54,643 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts. 2026-08-19 09:54:54,643 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-08-19 09:54:54,677 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:54:54,688 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-08-19 09:54:54,925 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-08-19 09:54:54,925 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-08-19 09:54:54,925 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-08-19 09:54:54,925 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-08-19 09:54:54,945 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-19 09:54:54,945 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-19 09:54:54,986 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-19 09:54:55,154 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-08-19 09:54:55,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:54:55,353 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-08-19 09:54:55,381 [ scc.git] DEBUG Calling 'git diff --name-only 9530c10ba9823fcba6b39139987bf4bcd4a60179..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-19 09:54:55,402 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#46](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/consoleText) for more details. Possible conflicts: - PR #174 will-moore 'Skip wells' - src/omero_zarr/masks.py - test/integration/clitest/test_export.py - Upstream changes - src/omero_zarr/masks.py - test/integration/clitest/test_export.py --conflicts 2026-08-19 09:54:55,413 [ scc.config] DEBUG Found github.token 2026-08-19 09:54:55,413 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2026-08-19 09:54:55,413 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-08-19 09:54:55,443 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:54:55,454 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-08-19 09:54:55,668 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-08-19 09:54:55,668 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-08-19 09:54:55,668 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2026-08-19 09:54:55,668 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_import.py 2026-08-19 09:54:55,668 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_import.py 2026-08-19 09:54:55,704 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-19 09:54:55,705 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-19 09:54:55,731 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-19 09:54:55,870 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-08-19 09:54:56,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:54:56,060 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-08-19 09:54:56,088 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-19 09:54:56,103 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#46](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/zarr_import.py - test/integration/clitest/test_import.py --conflicts 2026-08-19 09:54:56,113 [ scc.config] DEBUG Found github.token 2026-08-19 09:54:56,113 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2026-08-19 09:54:56,113 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-08-19 09:54:56,139 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:54:56,151 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 193 (Only parse import uris if stated) bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-08-19 09:54:56,359 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:54:56,415 [ scc.git] DEBUG src/omero_zarr/cli.py | 8 ++++++++ 2026-08-19 09:54:56,415 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 40 +++++++++++++++++++++------------------- 2026-08-19 09:54:56,415 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 19 deletions(-) 2026-08-19 09:54:56,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:54:56,609 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eeaeaa9e3789fce6809def20cd9a43f37f61668f' 2026-08-19 09:54:56,650 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:54:56,662 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 196 (Storage options only if needed) eeaeaa9e3789fce6809def20cd9a43f37f61668f' 2026-08-19 09:54:56,952 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-08-19 09:54:57,029 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:54:57,110 [ scc.git] DEBUG .pre-commit-config.yaml | 2 +- 2026-08-19 09:54:57,110 [ scc.git] DEBUG src/omero_zarr/masks.py | 10 ++++++++++ 2026-08-19 09:54:57,110 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 6 ++---- 2026-08-19 09:54:57,110 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 3 ++- 2026-08-19 09:54:57,110 [ scc.git] DEBUG test/integration/clitest/test_export.py | 2 +- 2026-08-19 09:54:57,110 [ scc.git] DEBUG 5 files changed, 16 insertions(+), 7 deletions(-) 2026-08-19 09:54:57,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:54:57,314 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-19 09:54:57,408 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:54:57,408 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:54:57,418 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:54:57,502 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-19 09:54:57,562 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa90e0bd50> has no local changes 2026-08-19 09:54:57,562 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' - PR 196 will-moore 'Storage options only if needed' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#46 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-08-19 09:54:57,678 [ scc.git] DEBUG [detached HEAD 6649bcd] merge master -Dorg -Ssuccess-only 2026-08-19 09:54:57,680 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:54:57,680 [ scc.repo] DEBUG ## PRs found: 2026-08-19 09:54:57,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 2 2026-08-19 09:54:57,920 [ scc.repo] DEBUG ## Branches found: 2026-08-19 09:54:57,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-08-19 09:54:57,921 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:54:57,921 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:54:57,940 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-19 09:54:57,957 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-19 09:54:57,957 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-19 09:54:58,730 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-19 09:55:00,259 [ scc.git] DEBUG Updating 9cc36cde..81f95f44 2026-08-19 09:55:00,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/700 HTTP/1.1" 200 None 2026-08-19 09:55:01,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/692 HTTP/1.1" 200 None 2026-08-19 09:55:02,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/701 HTTP/1.1" 200 None 2026-08-19 09:55:03,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/698 HTTP/1.1" 200 None 2026-08-19 09:55:04,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/697 HTTP/1.1" 200 None 2026-08-19 09:55:04,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/695 HTTP/1.1" 200 None 2026-08-19 09:55:05,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/693 HTTP/1.1" 200 None 2026-08-19 09:55:06,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/691 HTTP/1.1" 200 None 2026-08-19 09:55:07,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/686 HTTP/1.1" 200 None 2026-08-19 09:55:08,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/690 HTTP/1.1" 200 None 2026-08-19 09:55:08,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/681 HTTP/1.1" 200 None 2026-08-19 09:55:09,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/688 HTTP/1.1" 200 None 2026-08-19 09:55:10,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/685 HTTP/1.1" 200 None 2026-08-19 09:55:11,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/683 HTTP/1.1" 200 None 2026-08-19 09:55:12,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/680 HTTP/1.1" 200 None 2026-08-19 09:55:13,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/684 HTTP/1.1" 200 None 2026-08-19 09:55:14,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/682 HTTP/1.1" 200 None 2026-08-19 09:55:14,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/679 HTTP/1.1" 200 None 2026-08-19 09:55:15,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/677 HTTP/1.1" 200 None 2026-08-19 09:55:16,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/666 HTTP/1.1" 200 None 2026-08-19 09:55:17,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/676 HTTP/1.1" 200 None 2026-08-19 09:55:18,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/669 HTTP/1.1" 200 None 2026-08-19 09:55:19,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/662 HTTP/1.1" 200 None 2026-08-19 09:55:20,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/663 HTTP/1.1" 200 None 2026-08-19 09:55:21,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/674 HTTP/1.1" 200 None 2026-08-19 09:55:21,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/675 HTTP/1.1" 200 None 2026-08-19 09:55:22,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/671 HTTP/1.1" 200 None 2026-08-19 09:55:23,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/672 HTTP/1.1" 200 None 2026-08-19 09:55:24,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/667 HTTP/1.1" 200 None 2026-08-19 09:55:25,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/665 HTTP/1.1" 200 None 2026-08-19 09:55:26,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/656 HTTP/1.1" 200 None 2026-08-19 09:55:26,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/670 HTTP/1.1" 200 None 2026-08-19 09:55:27,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/664 HTTP/1.1" 200 None 2026-08-19 09:55:28,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/654 HTTP/1.1" 200 None 2026-08-19 09:55:29,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/648 HTTP/1.1" 200 None 2026-08-19 09:55:30,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/661 HTTP/1.1" 200 None 2026-08-19 09:55:31,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None 2026-08-19 09:55:32,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None 2026-08-19 09:55:33,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None 2026-08-19 09:55:34,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None 2026-08-19 09:55:34,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2026-08-19 09:55:35,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2026-08-19 09:55:36,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2026-08-19 09:55:37,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2026-08-19 09:55:38,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2026-08-19 09:55:39,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2026-08-19 09:55:40,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2026-08-19 09:55:41,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2026-08-19 09:55:42,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2026-08-19 09:55:42,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2026-08-19 09:55:43,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2026-08-19 09:55:44,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2026-08-19 09:55:45,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2026-08-19 09:55:46,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2026-08-19 09:55:47,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2026-08-19 09:55:47,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2026-08-19 09:55:47,976 [ scc.git] DEBUG ## Unique users: [] 2026-08-19 09:55:47,976 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:55:47,976 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:55:47,994 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-19 09:55:48,112 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:55:48,112 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:55:48,127 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:55:48,240 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-19 09:55:48,398 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa90b0ed50> has no local changes 2026-08-19 09:55:48,398 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Updating 9cc36cde..81f95f44 Previously merged: - PR 700 will-moore 'Fix parentheses in zoom level for loop for export script' - PR 692 will-moore 'colorbar lut background fix' - PR 701 will-moore 'bump nanoid to 3.3.18 with 'npm audit fix'' - PR 698 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.13' - PR 697 dependabot[bot] 'Bump postcss from 8.5.15 to 8.5.25' - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' - PR 691 dependabot[bot] 'Bump esbuild and vite' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#46 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-08-19 09:55:48,544 [ scc.git] DEBUG [detached HEAD 34809edc] merge master -Dorg -Ssuccess-only 2026-08-19 09:55:48,546 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:55:48,546 [ scc.repo] DEBUG ## PRs found: 2026-08-19 09:55:48,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2026-08-19 09:55:49,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2026-08-19 09:55:49,380 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-19 09:55:50,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-08-19 09:55:50,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:55:51,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-19 09:55:51,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-08-19 09:55:52,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:55:52,214 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-19 09:55:52,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2026-08-19 09:55:53,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2026-08-19 09:55:53,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-08-19 09:55:54,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:55:54,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-08-19 09:55:55,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:55:55,285 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2026-08-19 09:55:55,285 [ scc.repo] DEBUG ## Branches found: 2026-08-19 09:55:55,285 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-08-19 09:55:55,286 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:55:55,286 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:55:55,309 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-19 09:55:55,328 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-19 09:55:55,328 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-19 09:55:55,349 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-19 09:55:55,404 [ scc.git] DEBUG Already up to date. 2026-08-19 09:55:55,405 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2026-08-19 09:55:55,945 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-08-19 09:55:55,945 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2026-08-19 09:55:55,971 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2026-08-19 09:55:56,427 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-08-19 09:55:56,428 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2026-08-19 09:55:56,449 [ scc.git] DEBUG ## Unique users: [] 2026-08-19 09:55:56,449 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:55:56,449 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:55:56,462 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-08-19 09:55:56,492 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:55:56,504 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-08-19 09:55:56,661 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2026-08-19 09:55:56,737 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:55:56,795 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2026-08-19 09:55:56,795 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2026-08-19 09:55:56,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:55:56,993 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-08-19 09:55:57,020 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:55:57,031 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-08-19 09:55:57,239 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:55:57,324 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-19 09:55:57,324 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-19 09:55:57,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:55:57,520 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-19 09:55:57,626 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:55:57,626 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:55:57,639 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:55:57,734 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-19 09:55:57,778 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa90ca7f90> has no local changes 2026-08-19 09:55:57,778 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#46 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-08-19 09:55:57,973 [ scc.git] DEBUG [detached HEAD 0dea3a2] merge master -Dorg -Ssuccess-only 2026-08-19 09:55:57,974 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:55:57,974 [ scc.repo] DEBUG ## PRs found: 2026-08-19 09:55:58,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2026-08-19 09:55:58,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2026-08-19 09:55:59,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2026-08-19 09:55:59,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2026-08-19 09:55:59,885 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-19 09:56:00,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-08-19 09:56:01,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:56:01,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-08-19 09:56:02,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:56:02,181 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-08-19 09:56:02,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2026-08-19 09:56:03,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2026-08-19 09:56:03,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2026-08-19 09:56:03,783 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-19 09:56:04,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-08-19 09:56:05,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:56:05,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-08-19 09:56:06,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:56:06,039 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-08-19 09:56:06,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2026-08-19 09:56:06,567 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-19 09:56:07,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-08-19 09:56:07,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:56:08,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-08-19 09:56:08,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:56:08,818 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-08-19 09:56:09,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2026-08-19 09:56:09,350 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-19 09:56:10,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-08-19 09:56:10,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:56:11,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-08-19 09:56:11,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:56:11,607 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-08-19 09:56:12,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2026-08-19 09:56:12,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2026-08-19 09:56:12,635 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-19 09:56:13,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-08-19 09:56:13,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:56:14,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-08-19 09:56:14,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:56:14,835 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-08-19 09:56:15,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2026-08-19 09:56:15,357 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-19 09:56:16,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-08-19 09:56:16,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:56:17,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-08-19 09:56:17,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:56:17,569 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-08-19 09:56:18,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2026-08-19 09:56:18,071 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-19 09:56:18,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-08-19 09:56:19,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:56:19,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-08-19 09:56:20,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:56:20,288 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-08-19 09:56:20,288 [ scc.repo] DEBUG ## Branches found: 2026-08-19 09:56:20,288 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-08-19 09:56:20,289 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:56:20,290 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:56:20,311 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-19 09:56:20,333 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-19 09:56:20,334 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-19 09:56:20,358 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-19 09:56:20,424 [ scc.git] DEBUG Already up to date. 2026-08-19 09:56:20,424 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2026-08-19 09:56:20,908 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-19 09:56:20,908 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2026-08-19 09:56:20,934 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2026-08-19 09:56:21,376 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-19 09:56:21,376 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2026-08-19 09:56:21,407 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2026-08-19 09:56:21,853 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-19 09:56:21,853 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2026-08-19 09:56:21,877 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2026-08-19 09:56:22,306 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-19 09:56:22,306 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2026-08-19 09:56:22,332 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2026-08-19 09:56:22,772 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-19 09:56:22,772 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2026-08-19 09:56:22,794 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2026-08-19 09:56:23,272 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-19 09:56:23,272 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2026-08-19 09:56:23,301 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2026-08-19 09:56:23,738 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-19 09:56:23,738 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2026-08-19 09:56:23,759 [ scc.git] DEBUG ## Unique users: [] 2026-08-19 09:56:23,760 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:56:23,760 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:56:23,773 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-08-19 09:56:23,796 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:56:23,809 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-08-19 09:56:24,058 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:56:24,130 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-08-19 09:56:24,130 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-08-19 09:56:24,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:56:24,321 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-08-19 09:56:24,353 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:56:24,366 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-08-19 09:56:24,528 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-19 09:56:24,660 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:56:24,719 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2026-08-19 09:56:24,719 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2026-08-19 09:56:24,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:56:24,921 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-08-19 09:56:24,955 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:56:24,969 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-08-19 09:56:25,151 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-19 09:56:25,151 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-08-19 09:56:25,185 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-19 09:56:25,186 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-19 09:56:25,216 [ scc.git] DEBUG Calling 'git reset --hard 960277b015f99a6bdb8ad12db93acab9aa204e98' 2026-08-19 09:56:25,367 [ scc.git] DEBUG HEAD is now at 960277b merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2026-08-19 09:56:25,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:56:25,603 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-08-19 09:56:25,627 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-08-19 09:56:25,647 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#46](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2026-08-19 09:56:25,658 [ scc.config] DEBUG Found github.token 2026-08-19 09:56:25,658 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2026-08-19 09:56:25,658 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-08-19 09:56:25,683 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:56:25,698 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-08-19 09:56:25,855 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-19 09:56:25,936 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:56:26,013 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2026-08-19 09:56:26,013 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2026-08-19 09:56:26,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:56:26,201 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-08-19 09:56:26,229 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:56:26,241 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-08-19 09:56:26,406 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-19 09:56:26,490 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:56:26,552 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-08-19 09:56:26,552 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-08-19 09:56:26,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:56:26,744 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-08-19 09:56:26,770 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:56:26,782 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-08-19 09:56:26,950 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-19 09:56:26,950 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-08-19 09:56:26,976 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-19 09:56:26,977 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-19 09:56:27,006 [ scc.git] DEBUG Calling 'git reset --hard b63372e16579695e2a684a852f9381461d914386' 2026-08-19 09:56:27,162 [ scc.git] DEBUG HEAD is now at b63372e merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-08-19 09:56:27,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:56:27,364 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-08-19 09:56:27,388 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-08-19 09:56:27,407 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#46](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2026-08-19 09:56:27,420 [ scc.config] DEBUG Found github.token 2026-08-19 09:56:27,420 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2026-08-19 09:56:27,420 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-08-19 09:56:27,450 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:56:27,464 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-08-19 09:56:27,654 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-19 09:56:27,654 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-08-19 09:56:27,681 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-19 09:56:27,682 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-19 09:56:27,712 [ scc.git] DEBUG Calling 'git reset --hard b63372e16579695e2a684a852f9381461d914386' 2026-08-19 09:56:27,863 [ scc.git] DEBUG HEAD is now at b63372e merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-08-19 09:56:28,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:56:28,076 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-08-19 09:56:28,099 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-08-19 09:56:28,120 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#46](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2026-08-19 09:56:28,133 [ scc.config] DEBUG Found github.token 2026-08-19 09:56:28,133 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2026-08-19 09:56:28,133 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-19 09:56:28,252 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:56:28,252 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:56:28,265 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:56:28,366 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-19 09:56:28,439 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa90b68a50> has no local changes 2026-08-19 09:56:28,439 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#46 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-08-19 09:56:28,660 [ scc.git] DEBUG [detached HEAD cd9f767] merge master -Dorg -Ssuccess-only 2026-08-19 09:56:28,662 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:56:28,663 [ scc.repo] DEBUG ## PRs found: 2026-08-19 09:56:29,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2026-08-19 09:56:29,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/563 HTTP/1.1" 200 None 2026-08-19 09:56:30,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9f68a0cd8a6c663a360aa9433918b5d25aeab3ee?page=1 HTTP/1.1" 200 None 2026-08-19 09:56:30,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9f68a0cd8a6c663a360aa9433918b5d25aeab3ee/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:56:31,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9f68a0cd8a6c663a360aa9433918b5d25aeab3ee/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-19 09:56:31,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9f68a0cd8a6c663a360aa9433918b5d25aeab3ee?page=1 HTTP/1.1" 200 None 2026-08-19 09:56:32,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/9f68a0cd8a6c663a360aa9433918b5d25aeab3ee?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:56:32,218 [ scc.repo] DEBUG - PR 563 will-moore 'Use POST data for imgRdef save' 2026-08-19 09:56:32,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/562 HTTP/1.1" 200 None 2026-08-19 09:56:33,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/901bd0be162b3d830247d9d70eb8efa6a76fa7b9?page=1 HTTP/1.1" 200 None 2026-08-19 09:56:33,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/901bd0be162b3d830247d9d70eb8efa6a76fa7b9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:56:34,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/901bd0be162b3d830247d9d70eb8efa6a76fa7b9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-19 09:56:34,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/901bd0be162b3d830247d9d70eb8efa6a76fa7b9?page=1 HTTP/1.1" 200 None 2026-08-19 09:56:35,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/901bd0be162b3d830247d9d70eb8efa6a76fa7b9?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:56:35,438 [ scc.repo] DEBUG - PR 562 will-moore 'Keyboard select roi' 2026-08-19 09:56:35,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/532 HTTP/1.1" 200 None 2026-08-19 09:56:36,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/532/comments HTTP/1.1" 200 None 2026-08-19 09:56:37,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?page=1 HTTP/1.1" 200 None 2026-08-19 09:56:37,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:56:38,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-19 09:56:38,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?page=1 HTTP/1.1" 200 None 2026-08-19 09:56:39,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:56:39,135 [ scc.repo] DEBUG - PR 532 will-moore 'Zarr layers' 2026-08-19 09:56:39,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2026-08-19 09:56:40,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2026-08-19 09:56:40,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-08-19 09:56:41,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:56:41,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-08-19 09:56:42,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:56:42,187 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2026-08-19 09:56:42,187 [ scc.repo] DEBUG ## Branches found: 2026-08-19 09:56:42,187 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-08-19 09:56:42,188 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:56:42,188 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:56:42,218 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-19 09:56:42,240 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-19 09:56:42,240 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-19 09:56:43,212 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-19 09:56:43,974 [ scc.git] DEBUG Updating 7a798cee..3af5a346 2026-08-19 09:56:44,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/559 HTTP/1.1" 200 None 2026-08-19 09:56:45,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/558 HTTP/1.1" 200 None 2026-08-19 09:56:46,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/557 HTTP/1.1" 200 None 2026-08-19 09:56:47,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/541 HTTP/1.1" 200 None 2026-08-19 09:56:48,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/556 HTTP/1.1" 200 None 2026-08-19 09:56:49,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/554 HTTP/1.1" 200 None 2026-08-19 09:56:50,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/553 HTTP/1.1" 200 None 2026-08-19 09:56:51,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/552 HTTP/1.1" 200 None 2026-08-19 09:56:52,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/551 HTTP/1.1" 200 None 2026-08-19 09:56:52,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/550 HTTP/1.1" 200 None 2026-08-19 09:56:53,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/549 HTTP/1.1" 200 None 2026-08-19 09:56:54,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/548 HTTP/1.1" 200 None 2026-08-19 09:56:55,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/547 HTTP/1.1" 200 None 2026-08-19 09:56:55,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/540 HTTP/1.1" 200 None 2026-08-19 09:56:56,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/539 HTTP/1.1" 200 None 2026-08-19 09:56:57,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/537 HTTP/1.1" 200 None 2026-08-19 09:56:58,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/535 HTTP/1.1" 200 None 2026-08-19 09:56:59,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/527 HTTP/1.1" 200 None 2026-08-19 09:56:59,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/534 HTTP/1.1" 200 None 2026-08-19 09:57:00,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/533 HTTP/1.1" 200 None 2026-08-19 09:57:01,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/530 HTTP/1.1" 200 None 2026-08-19 09:57:02,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/528 HTTP/1.1" 200 None 2026-08-19 09:57:02,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/529 HTTP/1.1" 200 None 2026-08-19 09:57:03,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/526 HTTP/1.1" 200 None 2026-08-19 09:57:04,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/525 HTTP/1.1" 200 None 2026-08-19 09:57:05,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/524 HTTP/1.1" 200 None 2026-08-19 09:57:06,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/523 HTTP/1.1" 200 None 2026-08-19 09:57:06,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/522 HTTP/1.1" 200 None 2026-08-19 09:57:07,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/521 HTTP/1.1" 200 None 2026-08-19 09:57:08,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/520 HTTP/1.1" 200 None 2026-08-19 09:57:09,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/519 HTTP/1.1" 200 None 2026-08-19 09:57:10,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/518 HTTP/1.1" 200 None 2026-08-19 09:57:10,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/514 HTTP/1.1" 200 None 2026-08-19 09:57:11,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/513 HTTP/1.1" 200 None 2026-08-19 09:57:12,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/512 HTTP/1.1" 200 None 2026-08-19 09:57:13,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/465 HTTP/1.1" 200 None 2026-08-19 09:57:14,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/517 HTTP/1.1" 200 None 2026-08-19 09:57:15,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/516 HTTP/1.1" 200 None 2026-08-19 09:57:16,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2026-08-19 09:57:16,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2026-08-19 09:57:17,053 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2026-08-19 09:57:17,670 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-08-19 09:57:17,670 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2026-08-19 09:57:17,698 [ scc.git] DEBUG Calling 'git fetch origin pull/532/head' 2026-08-19 09:57:18,281 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-08-19 09:57:18,281 [ scc.git] DEBUG * branch refs/pull/532/head -> FETCH_HEAD 2026-08-19 09:57:18,313 [ scc.git] DEBUG Calling 'git fetch origin pull/562/head' 2026-08-19 09:57:18,985 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-08-19 09:57:18,985 [ scc.git] DEBUG * branch refs/pull/562/head -> FETCH_HEAD 2026-08-19 09:57:19,016 [ scc.git] DEBUG Calling 'git fetch origin pull/563/head' 2026-08-19 09:57:19,694 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-08-19 09:57:19,694 [ scc.git] DEBUG * branch refs/pull/563/head -> FETCH_HEAD 2026-08-19 09:57:19,720 [ scc.git] DEBUG ## Unique users: [] 2026-08-19 09:57:19,720 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:57:19,720 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:57:19,736 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2026-08-19 09:57:19,800 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:57:19,813 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2026-08-19 09:57:20,108 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2026-08-19 09:57:20,193 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:57:20,275 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2026-08-19 09:57:20,275 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2026-08-19 09:57:20,275 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2026-08-19 09:57:20,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:57:20,474 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-08-19 09:57:20,531 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:57:20,569 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 532 (Zarr layers) fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-08-19 09:57:21,397 [ scc.git] DEBUG Auto-merging css/app.css 2026-08-19 09:57:21,397 [ scc.git] DEBUG CONFLICT (content): Merge conflict in css/app.css 2026-08-19 09:57:21,397 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-19 09:57:21,397 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-08-19 09:57:21,397 [ scc.git] DEBUG Auto-merging package.json 2026-08-19 09:57:21,397 [ scc.git] DEBUG Auto-merging src/app/context.js 2026-08-19 09:57:21,397 [ scc.git] DEBUG Auto-merging src/model/image_config.js 2026-08-19 09:57:21,397 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2026-08-19 09:57:21,397 [ scc.git] DEBUG Auto-merging src/viewers/viewer/source/Image.js 2026-08-19 09:57:21,397 [ scc.git] DEBUG Auto-merging webpack.dev.config.js 2026-08-19 09:57:21,420 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-19 09:57:21,423 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-19 09:57:21,505 [ scc.git] DEBUG Calling 'git reset --hard 1a05f4e6d1428beb32545523eff60930ed37331f' 2026-08-19 09:57:21,890 [ scc.git] DEBUG HEAD is now at 1a05f4e6 merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 2026-08-19 09:57:22,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:57:22,087 [ scc.git] DEBUG Calling 'git merge-base 3af5a3461d5bbae51d9026388abf0139a32474ea fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-08-19 09:57:22,139 [ scc.git] DEBUG Calling 'git diff --name-only 0b7eaf71f7e3f5c7289fab4bf857094bdadce1e4..3af5a3461d5bbae51d9026388abf0139a32474ea' 2026-08-19 09:57:22,179 [ scc.git] INFO - PR 532 will-moore 'Zarr layers' Conflicting PR. Removed from build [OMERO-plugins-push#46](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/consoleText) for more details. Possible conflicts: - Upstream changes - css/app.css - package-lock.json --conflicts 2026-08-19 09:57:22,193 [ scc.config] DEBUG Found github.token 2026-08-19 09:57:22,193 [ scc.git] DEBUG Not adding comment to issue #532, already --conflicts. 2026-08-19 09:57:22,193 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...901bd0be162b3d830247d9d70eb8efa6a76fa7b9' 2026-08-19 09:57:22,262 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:57:22,274 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 562 (Keyboard select roi) 901bd0be162b3d830247d9d70eb8efa6a76fa7b9' 2026-08-19 09:57:22,615 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:57:22,707 [ scc.git] DEBUG src/app/context.js | 22 ++++++++++----------- 2026-08-19 09:57:22,707 [ scc.git] DEBUG src/regions/regions-edit.js | 48 ++++++++++++++++++++++++++++++++++++++++++++- 2026-08-19 09:57:22,707 [ scc.git] DEBUG src/utils/ui.js | 13 +++++++++--- 2026-08-19 09:57:22,707 [ scc.git] DEBUG 3 files changed, 68 insertions(+), 15 deletions(-) 2026-08-19 09:57:22,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:57:22,906 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9f68a0cd8a6c663a360aa9433918b5d25aeab3ee' 2026-08-19 09:57:22,978 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:57:22,992 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 563 (Use POST data for imgRdef save) 9f68a0cd8a6c663a360aa9433918b5d25aeab3ee' 2026-08-19 09:57:23,327 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:57:23,413 [ scc.git] DEBUG plugin/setup.py | 2 +- 2026-08-19 09:57:23,413 [ scc.git] DEBUG src/model/image_config.js | 7 ++++--- 2026-08-19 09:57:23,413 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 4 deletions(-) 2026-08-19 09:57:23,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:57:23,616 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-19 09:57:23,742 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:57:23,742 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:57:23,756 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:57:23,868 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-19 09:57:23,970 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa90b35390> has no local changes 2026-08-19 09:57:23,971 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7a798cee..3af5a346 Previously merged: - PR 559 dependabot[bot] 'Bump js-yaml and mocha' - PR 558 dependabot[bot] 'Bump fast-uri from 3.1.4 to 3.1.5' - PR 557 dependabot[bot] 'Bump socket.io-parser from 4.2.6 to 4.2.7' - PR 541 will-moore 'Only add channel to tile request string if active' - PR 556 dependabot[bot] 'Bump webpack-dev-server from 5.2.6 to 6.0.0' - PR 554 dependabot[bot] 'Bump http-proxy-middleware from 2.0.9 to 2.0.10' - PR 553 dependabot[bot] 'Bump postcss from 8.5.10 to 8.5.25' - PR 552 dependabot[bot] 'Bump tmp from 0.2.6 to 0.2.7' - PR 551 dependabot[bot] 'Bump body-parser from 1.20.5 to 1.20.6' - PR 550 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.6' - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.4 to 1.10.0' - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' - PR 535 dependabot[bot] 'Bump tmp and eslint' - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' - PR 529 will-moore 'Image id and roi id initial params' - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 471 will-moore 'Z projection disabled tooltip' - PR 562 will-moore 'Keyboard select roi' - PR 563 will-moore 'Use POST data for imgRdef save' Conflicting PRs (not included): - PR 532 will-moore 'Zarr layers' Generated by OMERO-plugins-push#46 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-08-19 09:57:24,148 [ scc.git] DEBUG [detached HEAD eecafbd9] merge master -Dorg -Ssuccess-only 2026-08-19 09:57:24,151 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:57:24,151 [ scc.repo] DEBUG ## PRs found: 2026-08-19 09:57:24,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2026-08-19 09:57:25,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2026-08-19 09:57:25,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2026-08-19 09:57:25,525 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-19 09:57:26,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-08-19 09:57:26,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:57:27,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-19 09:57:27,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-08-19 09:57:28,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:57:28,317 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-19 09:57:28,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2026-08-19 09:57:29,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-08-19 09:57:29,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:57:30,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-08-19 09:57:30,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:57:30,852 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-19 09:57:31,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2026-08-19 09:57:31,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2026-08-19 09:57:32,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322?page=1 HTTP/1.1" 200 None 2026-08-19 09:57:32,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:57:33,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322?page=1 HTTP/1.1" 200 None 2026-08-19 09:57:33,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:57:33,901 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2026-08-19 09:57:33,901 [ scc.repo] DEBUG ## Branches found: 2026-08-19 09:57:33,901 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-08-19 09:57:33,903 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:57:33,903 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:57:33,924 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-19 09:57:33,945 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-19 09:57:33,945 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-19 09:57:33,971 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-19 09:57:34,037 [ scc.git] DEBUG Already up to date. 2026-08-19 09:57:34,037 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-08-19 09:57:34,799 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-08-19 09:57:34,799 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-08-19 09:57:34,827 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2026-08-19 09:57:35,362 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-08-19 09:57:35,362 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2026-08-19 09:57:35,385 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2026-08-19 09:57:35,836 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-08-19 09:57:35,836 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2026-08-19 09:57:35,863 [ scc.git] DEBUG ## Unique users: [] 2026-08-19 09:57:35,863 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:57:35,863 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:57:35,876 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-08-19 09:57:35,902 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:57:35,914 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-08-19 09:57:36,172 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:57:36,242 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2026-08-19 09:57:36,242 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2026-08-19 09:57:36,242 [ scc.git] DEBUG requirements.txt | 2 +- 2026-08-19 09:57:36,242 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2026-08-19 09:57:36,242 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2026-08-19 09:57:36,242 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2026-08-19 09:57:36,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:57:36,427 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-08-19 09:57:36,464 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:57:36,477 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-08-19 09:57:36,727 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:57:36,796 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-19 09:57:36,797 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-19 09:57:36,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:57:36,985 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-08-19 09:57:37,018 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:57:37,029 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-08-19 09:57:37,204 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-08-19 09:57:37,204 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-08-19 09:57:37,233 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-19 09:57:37,235 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-19 09:57:37,293 [ scc.git] DEBUG Calling 'git reset --hard 325a3fadf29457d385212f753db70c73c93441cb' 2026-08-19 09:57:37,454 [ scc.git] DEBUG HEAD is now at 325a3fa merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2026-08-19 09:57:37,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:57:37,651 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-08-19 09:57:37,679 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2026-08-19 09:57:37,701 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#46](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2026-08-19 09:57:37,712 [ scc.config] DEBUG Found github.token 2026-08-19 09:57:37,712 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2026-08-19 09:57:37,712 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-19 09:57:37,824 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:57:37,824 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:57:37,837 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:57:37,947 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-19 09:57:38,019 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa90b29310> has no local changes 2026-08-19 09:57:38,019 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#46 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-08-19 09:57:38,204 [ scc.git] DEBUG [detached HEAD 439dbb8] merge master -Dorg -Ssuccess-only 2026-08-19 09:57:38,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:57:38,207 [ scc.repo] DEBUG ## PRs found: 2026-08-19 09:57:38,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2026-08-19 09:57:39,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None 2026-08-19 09:57:39,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None 2026-08-19 09:57:40,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-08-19 09:57:40,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:57:41,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-08-19 09:57:41,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:57:41,573 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-08-19 09:57:42,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2026-08-19 09:57:42,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2026-08-19 09:57:43,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-08-19 09:57:43,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:57:44,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-08-19 09:57:44,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:57:44,636 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-08-19 09:57:45,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2026-08-19 09:57:45,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2026-08-19 09:57:46,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-08-19 09:57:46,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:57:47,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-08-19 09:57:47,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:57:47,647 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-08-19 09:57:47,647 [ scc.repo] DEBUG ## Branches found: 2026-08-19 09:57:47,647 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-08-19 09:57:47,648 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:57:47,648 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:57:47,669 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-19 09:57:47,691 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-19 09:57:47,691 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-19 09:57:47,853 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-19 09:57:48,279 [ scc.git] DEBUG Updating 3cd120c..6a653e4 2026-08-19 09:57:48,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/95 HTTP/1.1" 200 None 2026-08-19 09:57:49,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/94 HTTP/1.1" 200 None 2026-08-19 09:57:50,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2026-08-19 09:57:50,574 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2026-08-19 09:57:51,243 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-08-19 09:57:51,243 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2026-08-19 09:57:51,278 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2026-08-19 09:57:52,011 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-08-19 09:57:52,011 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2026-08-19 09:57:52,036 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head' 2026-08-19 09:57:52,536 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-08-19 09:57:52,536 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD 2026-08-19 09:57:52,565 [ scc.git] DEBUG ## Unique users: [] 2026-08-19 09:57:52,566 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:57:52,566 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:57:52,580 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-08-19 09:57:52,643 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:57:52,657 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-08-19 09:57:52,945 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2026-08-19 09:57:52,945 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2026-08-19 09:57:52,945 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-08-19 09:57:52,945 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-08-19 09:57:52,973 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-19 09:57:52,974 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-19 09:57:52,999 [ scc.git] DEBUG Calling 'git reset --hard 6a653e49e3589ccb463166506896639f6f0a5a2b' 2026-08-19 09:57:53,169 [ scc.git] DEBUG HEAD is now at 6a653e4 Fix workflow permission indentation 2026-08-19 09:57:53,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:57:53,352 [ scc.git] DEBUG Calling 'git merge-base 6a653e49e3589ccb463166506896639f6f0a5a2b 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-08-19 09:57:53,407 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..6a653e49e3589ccb463166506896639f6f0a5a2b' 2026-08-19 09:57:53,438 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#46](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2026-08-19 09:57:53,452 [ scc.config] DEBUG Found github.token 2026-08-19 09:57:53,452 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2026-08-19 09:57:53,452 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2026-08-19 09:57:53,521 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:57:53,537 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2026-08-19 09:57:53,941 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-08-19 09:57:53,941 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-08-19 09:57:53,941 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2026-08-19 09:57:53,965 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-19 09:57:53,966 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-19 09:57:53,996 [ scc.git] DEBUG Calling 'git reset --hard 6a653e49e3589ccb463166506896639f6f0a5a2b' 2026-08-19 09:57:54,171 [ scc.git] DEBUG HEAD is now at 6a653e4 Fix workflow permission indentation 2026-08-19 09:57:54,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:57:54,386 [ scc.git] DEBUG Calling 'git merge-base 6a653e49e3589ccb463166506896639f6f0a5a2b 78e55539b68e351ed5ef202854718b49a37729a7' 2026-08-19 09:57:54,446 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..6a653e49e3589ccb463166506896639f6f0a5a2b' 2026-08-19 09:57:54,480 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#46](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2026-08-19 09:57:54,493 [ scc.config] DEBUG Found github.token 2026-08-19 09:57:54,493 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2026-08-19 09:57:54,494 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-08-19 09:57:54,542 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:57:54,555 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-08-19 09:57:54,786 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:57:54,862 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++- 2026-08-19 09:57:54,862 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-) 2026-08-19 09:57:55,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:57:55,066 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-19 09:57:55,193 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:57:55,193 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:57:55,208 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:57:55,317 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-19 09:57:55,385 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa90b97b10> has no local changes 2026-08-19 09:57:55,385 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..6a653e4 Previously merged: - PR 95 sbesson 'Remove manual CHANGELOG in favor of automated GitHub releases' - PR 94 sbesson 'Cap pandas to 2.x and clean up unused dependencies' - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#46 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-08-19 09:57:55,531 [ scc.git] DEBUG [detached HEAD a292a4f] merge master -Dorg -Ssuccess-only 2026-08-19 09:57:55,533 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:57:55,533 [ scc.repo] DEBUG ## PRs found: 2026-08-19 09:57:55,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2026-08-19 09:57:56,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2026-08-19 09:57:57,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-08-19 09:57:57,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:57:58,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-08-19 09:57:58,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:57:58,715 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-19 09:57:59,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2026-08-19 09:57:59,219 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-19 09:57:59,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-08-19 09:58:00,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:58:00,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-08-19 09:58:01,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:58:01,335 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-08-19 09:58:01,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2026-08-19 09:58:01,838 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-19 09:58:02,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-08-19 09:58:03,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:58:03,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-08-19 09:58:04,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:58:04,063 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-08-19 09:58:04,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2026-08-19 09:58:05,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2026-08-19 09:58:05,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2026-08-19 09:58:06,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2026-08-19 09:58:06,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2026-08-19 09:58:07,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2026-08-19 09:58:07,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2026-08-19 09:58:07,636 [ scc.repo] DEBUG ## Branches found: 2026-08-19 09:58:07,636 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-08-19 09:58:07,637 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:58:07,637 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:07,659 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-19 09:58:07,680 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-19 09:58:07,680 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-19 09:58:07,703 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-19 09:58:07,758 [ scc.git] DEBUG Already up to date. 2026-08-19 09:58:07,758 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2026-08-19 09:58:08,246 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-08-19 09:58:08,246 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2026-08-19 09:58:08,269 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2026-08-19 09:58:08,767 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-08-19 09:58:08,767 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2026-08-19 09:58:08,797 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2026-08-19 09:58:09,269 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-08-19 09:58:09,269 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2026-08-19 09:58:09,295 [ scc.git] DEBUG ## Unique users: [] 2026-08-19 09:58:09,295 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:58:09,295 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:09,310 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2026-08-19 09:58:09,332 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:09,346 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2026-08-19 09:58:09,661 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:58:09,723 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2026-08-19 09:58:09,723 [ scc.git] DEBUG package.json | 2 +- 2026-08-19 09:58:09,723 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2026-08-19 09:58:09,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:58:09,909 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2026-08-19 09:58:09,942 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:09,957 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2026-08-19 09:58:10,146 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-19 09:58:10,146 [ scc.git] DEBUG Auto-merging package.json 2026-08-19 09:58:10,226 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:58:10,305 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2026-08-19 09:58:10,305 [ scc.git] DEBUG package.json | 2 +- 2026-08-19 09:58:10,305 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-08-19 09:58:10,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:58:10,509 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-08-19 09:58:10,551 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:10,565 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-08-19 09:58:10,800 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:58:10,870 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-19 09:58:10,870 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-19 09:58:11,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:58:11,081 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-19 09:58:11,201 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:58:11,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:11,232 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:58:11,324 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-19 09:58:11,393 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa90d8d350> has no local changes 2026-08-19 09:58:11,393 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#46 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-08-19 09:58:11,616 [ scc.git] DEBUG [detached HEAD 8a1b3c0] merge master -Dorg -Ssuccess-only 2026-08-19 09:58:11,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:58:11,619 [ scc.repo] DEBUG ## PRs found: 2026-08-19 09:58:11,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2026-08-19 09:58:12,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2026-08-19 09:58:12,443 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-19 09:58:13,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-08-19 09:58:13,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:58:14,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-19 09:58:14,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-08-19 09:58:15,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:58:15,180 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-19 09:58:15,180 [ scc.repo] DEBUG ## Branches found: 2026-08-19 09:58:15,180 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-08-19 09:58:15,181 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:58:15,181 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:15,198 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-19 09:58:15,215 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-19 09:58:15,215 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-19 09:58:15,234 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-19 09:58:15,286 [ scc.git] DEBUG Already up to date. 2026-08-19 09:58:15,286 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2026-08-19 09:58:15,763 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2026-08-19 09:58:15,763 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2026-08-19 09:58:15,786 [ scc.git] DEBUG ## Unique users: [] 2026-08-19 09:58:15,786 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:58:15,786 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:15,800 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2026-08-19 09:58:15,820 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:15,831 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2026-08-19 09:58:16,000 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:58:16,062 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-19 09:58:16,062 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-19 09:58:16,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:58:16,261 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-19 09:58:16,378 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:58:16,378 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:16,392 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:58:16,504 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-19 09:58:16,560 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa90b6ce50> has no local changes 2026-08-19 09:58:16,560 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#46 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-08-19 09:58:16,715 [ scc.git] DEBUG [detached HEAD a1069f6] merge master -Dorg -Ssuccess-only 2026-08-19 09:58:16,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:58:16,717 [ scc.repo] DEBUG ## PRs found: 2026-08-19 09:58:17,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2026-08-19 09:58:17,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2026-08-19 09:58:17,557 [ scc.repo] DEBUG ## Branches found: 2026-08-19 09:58:17,557 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-08-19 09:58:17,558 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:58:17,558 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:17,589 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-19 09:58:17,607 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-19 09:58:17,608 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-19 09:58:17,700 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-19 09:58:17,960 [ scc.git] DEBUG Updating bdfeb5e..fc9ff96 2026-08-19 09:58:18,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/36 HTTP/1.1" 200 None 2026-08-19 09:58:19,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/35 HTTP/1.1" 200 None 2026-08-19 09:58:19,499 [ scc.git] DEBUG ## Unique users: [] 2026-08-19 09:58:19,499 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:58:19,499 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:19,517 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-19 09:58:19,629 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:58:19,629 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:19,643 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:58:19,743 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-19 09:58:19,803 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa90b3c050> has no local changes 2026-08-19 09:58:19,803 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Generated by OMERO-plugins-push#46 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-08-19 09:58:19,965 [ scc.git] DEBUG [detached HEAD 09e7426] merge master -Dorg -Ssuccess-only 2026-08-19 09:58:19,967 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:58:19,967 [ scc.repo] DEBUG ## PRs found: 2026-08-19 09:58:20,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2026-08-19 09:58:20,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2026-08-19 09:58:20,872 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-19 09:58:21,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-08-19 09:58:22,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:58:22,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-19 09:58:23,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-08-19 09:58:23,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:58:23,676 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-19 09:58:24,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2026-08-19 09:58:24,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2026-08-19 09:58:25,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-08-19 09:58:25,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:58:26,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-08-19 09:58:26,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:58:26,924 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2026-08-19 09:58:26,924 [ scc.repo] DEBUG ## Branches found: 2026-08-19 09:58:26,924 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-08-19 09:58:26,926 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:58:26,926 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:26,948 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-19 09:58:26,969 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-19 09:58:26,969 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-19 09:58:26,994 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-19 09:58:27,045 [ scc.git] DEBUG Already up to date. 2026-08-19 09:58:27,045 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-08-19 09:58:27,621 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-08-19 09:58:27,622 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-08-19 09:58:27,643 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-08-19 09:58:28,134 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-08-19 09:58:28,134 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-08-19 09:58:28,159 [ scc.git] DEBUG ## Unique users: [] 2026-08-19 09:58:28,159 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:58:28,159 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:28,174 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-08-19 09:58:28,207 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:28,223 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-08-19 09:58:28,533 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2026-08-19 09:58:28,533 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2026-08-19 09:58:28,533 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2026-08-19 09:58:28,533 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2026-08-19 09:58:28,533 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2026-08-19 09:58:28,534 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2026-08-19 09:58:28,534 [ scc.git] DEBUG Auto-merging setup.py 2026-08-19 09:58:28,534 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2026-08-19 09:58:28,557 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-19 09:58:28,558 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-19 09:58:28,598 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2026-08-19 09:58:28,770 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2026-08-19 09:58:29,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:58:29,030 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-08-19 09:58:29,064 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2026-08-19 09:58:29,089 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#46](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - omero_signup/signup_settings.py - setup.py - omero_signup/views.py --conflicts 2026-08-19 09:58:29,103 [ scc.config] DEBUG Found github.token 2026-08-19 09:58:29,103 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2026-08-19 09:58:29,103 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-08-19 09:58:29,127 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:29,142 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-08-19 09:58:29,336 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:58:29,394 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-19 09:58:29,394 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-19 09:58:29,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:58:29,611 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-19 09:58:29,721 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:58:29,722 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:29,736 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:58:29,832 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-19 09:58:29,901 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa90d81b10> has no local changes 2026-08-19 09:58:29,901 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#46 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-08-19 09:58:30,037 [ scc.git] DEBUG [detached HEAD 28d1169] merge master -Dorg -Ssuccess-only 2026-08-19 09:58:30,040 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:58:30,040 [ scc.repo] DEBUG ## PRs found: 2026-08-19 09:58:31,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2026-08-19 09:58:31,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2026-08-19 09:58:32,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2026-08-19 09:58:32,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2026-08-19 09:58:33,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-08-19 09:58:34,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:58:34,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-08-19 09:58:35,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/c18c080227e97899382d3464baa7c7885a621623?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:58:35,000 [ scc.repo] DEBUG - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-08-19 09:58:35,001 [ scc.repo] DEBUG ## Branches found: 2026-08-19 09:58:35,001 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-08-19 09:58:35,001 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:58:35,002 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:35,024 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-19 09:58:35,042 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-19 09:58:35,042 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-19 09:58:35,067 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-19 09:58:35,264 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2026-08-19 09:58:35,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2026-08-19 09:58:36,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2026-08-19 09:58:37,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2026-08-19 09:58:37,549 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-08-19 09:58:38,096 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2026-08-19 09:58:38,096 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-08-19 09:58:38,121 [ scc.git] DEBUG ## Unique users: [] 2026-08-19 09:58:38,121 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:58:38,121 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:38,135 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c18c080227e97899382d3464baa7c7885a621623' 2026-08-19 09:58:38,168 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:38,181 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (Add 'ms' target for ./docker) c18c080227e97899382d3464baa7c7885a621623' 2026-08-19 09:58:38,388 [ scc.git] DEBUG Auto-merging .github/workflows/main.yml 2026-08-19 09:58:38,471 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:58:38,578 [ scc.git] DEBUG .github/workflows/main.yml | 8 ++++++++ 2026-08-19 09:58:38,579 [ scc.git] DEBUG docker | 22 ++++++++++++++++++++++ 2026-08-19 09:58:38,579 [ scc.git] DEBUG ms/compose.yml | 11 +++++++++++ 2026-08-19 09:58:38,580 [ scc.git] DEBUG ms/example/Dockerfile | 13 +++++++++++++ 2026-08-19 09:58:38,583 [ scc.git] DEBUG ms/test | 2 ++ 2026-08-19 09:58:38,583 [ scc.git] DEBUG 5 files changed, 56 insertions(+) 2026-08-19 09:58:38,583 [ scc.git] DEBUG create mode 100644 ms/compose.yml 2026-08-19 09:58:38,583 [ scc.git] DEBUG create mode 100644 ms/example/Dockerfile 2026-08-19 09:58:38,583 [ scc.git] DEBUG create mode 100755 ms/test 2026-08-19 09:58:38,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:58:38,768 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-19 09:58:38,872 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:58:38,873 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:38,887 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:58:38,983 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-19 09:58:39,057 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa90192cd0> has no local changes 2026-08-19 09:58:39,057 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Generated by OMERO-plugins-push#46 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-08-19 09:58:39,194 [ scc.git] DEBUG [detached HEAD 11d385c] merge master -Dorg -Ssuccess-only 2026-08-19 09:58:39,195 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:58:39,196 [ scc.repo] DEBUG ## PRs found: 2026-08-19 09:58:39,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2026-08-19 09:58:40,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2026-08-19 09:58:40,012 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-19 09:58:40,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-08-19 09:58:41,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:58:41,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-19 09:58:42,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-08-19 09:58:42,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:58:42,913 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-19 09:58:42,914 [ scc.repo] DEBUG ## Branches found: 2026-08-19 09:58:42,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-08-19 09:58:42,914 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:58:42,915 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:42,951 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-19 09:58:42,968 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-19 09:58:42,968 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-19 09:58:42,987 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-19 09:58:43,049 [ scc.git] DEBUG Already up to date. 2026-08-19 09:58:43,049 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-08-19 09:58:43,522 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2026-08-19 09:58:43,522 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-08-19 09:58:43,544 [ scc.git] DEBUG ## Unique users: [] 2026-08-19 09:58:43,544 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:58:43,545 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:43,556 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-08-19 09:58:43,580 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:43,592 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-08-19 09:58:43,782 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:58:43,836 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-19 09:58:43,836 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-19 09:58:44,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:58:44,019 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-19 09:58:44,147 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:58:44,147 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:44,159 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:58:44,252 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-19 09:58:44,307 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa90188f50> has no local changes 2026-08-19 09:58:44,307 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#46 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-08-19 09:58:44,433 [ scc.git] DEBUG [detached HEAD 137a91c] merge master -Dorg -Ssuccess-only 2026-08-19 09:58:44,434 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:58:44,435 [ scc.repo] DEBUG ## PRs found: 2026-08-19 09:58:44,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2026-08-19 09:58:45,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2026-08-19 09:58:45,243 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-19 09:58:45,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-08-19 09:58:46,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:58:47,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-19 09:58:47,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-08-19 09:58:47,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:58:47,980 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-19 09:58:47,980 [ scc.repo] DEBUG ## Branches found: 2026-08-19 09:58:47,980 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-08-19 09:58:47,981 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:58:47,981 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:48,003 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-19 09:58:48,027 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-19 09:58:48,028 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-19 09:58:48,054 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-19 09:58:48,243 [ scc.git] DEBUG Updating deab817..160d894 2026-08-19 09:58:48,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2026-08-19 09:58:48,823 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-08-19 09:58:49,314 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2026-08-19 09:58:49,314 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-08-19 09:58:49,341 [ scc.git] DEBUG ## Unique users: [] 2026-08-19 09:58:49,341 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:58:49,341 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:49,357 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-08-19 09:58:49,383 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:49,398 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-08-19 09:58:49,609 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:58:49,682 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-19 09:58:49,682 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-19 09:58:49,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:58:49,877 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-19 09:58:50,017 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:58:50,017 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:50,032 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:58:50,135 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-19 09:58:50,198 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa90b76990> has no local changes 2026-08-19 09:58:50,198 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#46 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-08-19 09:58:50,351 [ scc.git] DEBUG [detached HEAD 192b8ae] merge master -Dorg -Ssuccess-only 2026-08-19 09:58:50,352 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:58:50,353 [ scc.git] INFO Overriding base-branch from master to main 2026-08-19 09:58:50,353 [ scc.repo] DEBUG ## PRs found: 2026-08-19 09:58:50,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2026-08-19 09:58:51,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2026-08-19 09:58:51,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2026-08-19 09:58:52,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-08-19 09:58:52,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:58:53,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-19 09:58:53,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-08-19 09:58:54,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:58:54,239 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2026-08-19 09:58:54,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2026-08-19 09:58:55,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2026-08-19 09:58:55,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2026-08-19 09:58:56,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-08-19 09:58:56,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:58:57,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-08-19 09:58:57,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:58:57,914 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-08-19 09:58:57,915 [ scc.repo] DEBUG ## Branches found: 2026-08-19 09:58:57,915 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-08-19 09:58:57,916 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:58:57,916 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:58:57,937 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2026-08-19 09:58:57,959 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-19 09:58:57,959 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2026-08-19 09:58:57,988 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2026-08-19 09:58:58,171 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2026-08-19 09:58:58,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2026-08-19 09:58:59,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2026-08-19 09:58:59,616 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2026-08-19 09:59:00,163 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-08-19 09:59:00,164 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2026-08-19 09:59:00,187 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2026-08-19 09:59:00,912 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-08-19 09:59:00,912 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2026-08-19 09:59:00,940 [ scc.git] DEBUG ## Unique users: [] 2026-08-19 09:59:00,940 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:59:00,940 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:59:00,957 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-08-19 09:59:00,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:59:01,011 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-08-19 09:59:01,294 [ scc.git] DEBUG Auto-merging README.rst 2026-08-19 09:59:01,294 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2026-08-19 09:59:01,294 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2026-08-19 09:59:01,294 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-08-19 09:59:01,320 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-19 09:59:01,322 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-19 09:59:01,362 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-08-19 09:59:01,523 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-08-19 09:59:01,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:01,703 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-08-19 09:59:01,727 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-08-19 09:59:01,746 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#46](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2026-08-19 09:59:01,756 [ scc.config] DEBUG Found github.token 2026-08-19 09:59:01,756 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2026-08-19 09:59:01,756 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-08-19 09:59:01,805 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:59:01,819 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-08-19 09:59:02,024 [ scc.git] DEBUG Auto-merging README.rst 2026-08-19 09:59:02,024 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-08-19 09:59:02,096 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:59:02,172 [ scc.git] DEBUG README.rst | 3 + 2026-08-19 09:59:02,172 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2026-08-19 09:59:02,172 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2026-08-19 09:59:02,173 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2026-08-19 09:59:02,173 [ scc.git] DEBUG setup.py | 5 +- 2026-08-19 09:59:02,173 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2026-08-19 09:59:02,173 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2026-08-19 09:59:02,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:02,367 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-19 09:59:02,494 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:59:02,494 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:59:02,508 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:59:02,609 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-19 09:59:02,670 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa90da2e90> has no local changes 2026-08-19 09:59:02,670 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#46 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-08-19 09:59:02,832 [ scc.git] DEBUG [detached HEAD bf56339] merge master -Dorg -Ssuccess-only 2026-08-19 09:59:02,833 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:59:02,833 [ scc.repo] DEBUG ## PRs found: 2026-08-19 09:59:03,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2026-08-19 09:59:03,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2026-08-19 09:59:03,677 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-19 09:59:04,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-08-19 09:59:05,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:59:05,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-19 09:59:06,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-08-19 09:59:06,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:59:06,535 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-19 09:59:06,535 [ scc.repo] DEBUG ## Branches found: 2026-08-19 09:59:06,535 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-08-19 09:59:06,536 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:59:06,536 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:59:06,556 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-19 09:59:06,577 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-19 09:59:06,578 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-19 09:59:06,601 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-19 09:59:06,666 [ scc.git] DEBUG Already up to date. 2026-08-19 09:59:06,666 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2026-08-19 09:59:07,169 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2026-08-19 09:59:07,169 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2026-08-19 09:59:07,194 [ scc.git] DEBUG ## Unique users: [] 2026-08-19 09:59:07,195 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:59:07,195 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:59:07,210 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-08-19 09:59:07,234 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:59:07,249 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-08-19 09:59:07,444 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:59:07,508 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-19 09:59:07,508 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-19 09:59:07,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:07,716 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-19 09:59:07,822 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:59:07,822 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:59:07,836 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:59:07,932 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-19 09:59:07,989 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa901dd490> has no local changes 2026-08-19 09:59:07,990 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#46 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-08-19 09:59:08,133 [ scc.git] DEBUG [detached HEAD 55dfd8f] merge master -Dorg -Ssuccess-only 2026-08-19 09:59:08,135 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:59:08,136 [ scc.repo] DEBUG ## PRs found: 2026-08-19 09:59:08,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2026-08-19 09:59:08,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2026-08-19 09:59:08,976 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-19 09:59:09,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-08-19 09:59:10,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:59:21,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-19 09:59:21,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-08-19 09:59:22,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:59:22,337 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-19 09:59:22,337 [ scc.repo] DEBUG ## Branches found: 2026-08-19 09:59:22,338 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-08-19 09:59:22,339 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:59:22,339 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:59:22,359 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-19 09:59:22,376 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-19 09:59:22,376 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-19 09:59:22,395 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-19 09:59:22,442 [ scc.git] DEBUG Already up to date. 2026-08-19 09:59:22,442 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2026-08-19 09:59:22,908 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2026-08-19 09:59:22,908 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2026-08-19 09:59:22,926 [ scc.git] DEBUG ## Unique users: [] 2026-08-19 09:59:22,926 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:59:22,926 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:59:22,938 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-08-19 09:59:22,956 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:59:22,966 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-08-19 09:59:23,139 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:59:23,191 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-19 09:59:23,191 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-19 09:59:23,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:23,396 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-19 09:59:23,499 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:59:23,499 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:59:23,511 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:59:23,595 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-19 09:59:23,643 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa901be390> has no local changes 2026-08-19 09:59:23,643 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#46 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-08-19 09:59:23,854 [ scc.git] DEBUG [detached HEAD c9db3ab] merge master -Dorg -Ssuccess-only 2026-08-19 09:59:23,856 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:59:23,856 [ scc.repo] DEBUG ## PRs found: 2026-08-19 09:59:24,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2026-08-19 09:59:24,081 [ scc.repo] DEBUG ## Branches found: 2026-08-19 09:59:24,081 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-08-19 09:59:24,082 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:59:24,082 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:59:24,100 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-19 09:59:24,119 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-19 09:59:24,119 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-19 09:59:24,140 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-19 09:59:24,194 [ scc.git] DEBUG Already up to date. 2026-08-19 09:59:24,194 [ scc.git] DEBUG ## Unique users: [] 2026-08-19 09:59:24,194 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:59:24,194 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:59:24,211 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-19 09:59:24,326 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:59:24,326 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:59:24,340 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:59:24,434 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-19 09:59:24,536 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa90d8e590> has no local changes 2026-08-19 09:59:24,536 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#46 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-08-19 09:59:24,690 [ scc.git] DEBUG [detached HEAD 475244c] merge master -Dorg -Ssuccess-only 2026-08-19 09:59:24,691 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:59:24,691 [ scc.git] INFO Overriding base-branch from master to develop 2026-08-19 09:59:24,691 [ scc.repo] DEBUG ## PRs found: 2026-08-19 09:59:24,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2026-08-19 09:59:25,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/232 HTTP/1.1" 200 None 2026-08-19 09:59:26,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None 2026-08-19 09:59:26,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-19 09:59:27,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-19 09:59:30,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None 2026-08-19 09:59:30,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/e190baa635f40826befc84321719243092ee849f?per_page=1 HTTP/1.1" 200 2 2026-08-19 09:59:30,682 [ scc.repo] DEBUG - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' 2026-08-19 09:59:30,682 [ scc.repo] DEBUG ## Branches found: 2026-08-19 09:59:30,682 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-08-19 09:59:30,683 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:59:30,684 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:59:30,702 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-08-19 09:59:30,719 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-19 09:59:30,719 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-08-19 09:59:30,825 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-08-19 09:59:31,061 [ scc.git] DEBUG Updating 4b4c755..5b4d768 2026-08-19 09:59:31,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-08-19 09:59:32,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-08-19 09:59:33,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-08-19 09:59:33,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-08-19 09:59:34,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2026-08-19 09:59:35,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2026-08-19 09:59:36,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2026-08-19 09:59:36,430 [ scc.git] DEBUG Calling 'git fetch origin pull/232/head' 2026-08-19 09:59:37,044 [ scc.git] DEBUG From https://github.com/ome/scripts 2026-08-19 09:59:37,044 [ scc.git] DEBUG * branch refs/pull/232/head -> FETCH_HEAD 2026-08-19 09:59:37,067 [ scc.git] DEBUG ## Unique users: [] 2026-08-19 09:59:37,067 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:59:37,067 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:59:37,082 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e190baa635f40826befc84321719243092ee849f' 2026-08-19 09:59:37,120 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:59:37,136 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 232 (Add Auto header detection to `Populate_Metadata.py`) e190baa635f40826befc84321719243092ee849f' 2026-08-19 09:59:37,371 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-19 09:59:37,441 [ scc.git] DEBUG omero/import_scripts/Populate_Metadata.py | 26 ++++++++++++++++++++++++-- 2026-08-19 09:59:37,441 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2026-08-19 09:59:37,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:37,641 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-19 09:59:37,752 [ scc.git] DEBUG Get sha1 of %s 2026-08-19 09:59:37,753 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-19 09:59:37,769 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:59:37,885 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-19 09:59:37,949 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa90211a10> has no local changes 2026-08-19 09:59:37,949 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' Generated by OMERO-plugins-push#46 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-08-19 09:59:38,134 [ scc.git] DEBUG [detached HEAD db933ee] merge master -Dorg -Ssuccess-only 2026-08-19 09:59:38,135 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:59:38,135 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-19 09:59:38,363 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2026-08-19 09:59:38,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:38,598 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2026-08-19 09:59:38,605 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2026-08-19 09:59:39,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:39,039 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2026-08-19 09:59:39,047 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2026-08-19 09:59:39,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:39,485 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2026-08-19 09:59:39,493 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2026-08-19 09:59:39,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:39,943 [ scc.config] DEBUG Found submodule.omero-figure.url 2026-08-19 09:59:40,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:40,375 [ scc.config] DEBUG Found submodule.omero-figure.branch 2026-08-19 09:59:40,382 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2026-08-19 09:59:40,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:40,808 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2026-08-19 09:59:40,814 [ scc.config] DEBUG Found submodule.omero-gallery.url 2026-08-19 09:59:41,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:41,247 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2026-08-19 09:59:41,254 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2026-08-19 09:59:41,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:41,678 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2026-08-19 09:59:41,685 [ scc.config] DEBUG Found submodule.omero-mapr.url 2026-08-19 09:59:42,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:42,120 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2026-08-19 09:59:42,126 [ scc.config] DEBUG Found submodule.omero-metadata.url 2026-08-19 09:59:42,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:42,566 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2026-08-19 09:59:42,573 [ scc.config] DEBUG Found submodule.omero-parade.url 2026-08-19 09:59:42,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:43,015 [ scc.config] DEBUG Found submodule.omero-parade.branch 2026-08-19 09:59:43,022 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2026-08-19 09:59:43,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:43,462 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2026-08-19 09:59:43,469 [ scc.config] DEBUG Found submodule.omero-rois.url 2026-08-19 09:59:43,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:43,905 [ scc.config] DEBUG Found submodule.omero-signup.url 2026-08-19 09:59:44,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:44,339 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2026-08-19 09:59:44,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:44,797 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2026-08-19 09:59:44,806 [ scc.config] DEBUG Found submodule.omero-upload.url 2026-08-19 09:59:45,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:45,243 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2026-08-19 09:59:45,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:45,702 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2026-08-19 09:59:46,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:46,146 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2026-08-19 09:59:46,156 [ scc.config] DEBUG Found submodule.omero-weberror.url 2026-08-19 09:59:46,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:46,579 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2026-08-19 09:59:46,588 [ scc.config] DEBUG Found submodule.omero-webtest.url 2026-08-19 09:59:46,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:47,009 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2026-08-19 09:59:47,016 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2026-08-19 09:59:47,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:47,450 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2026-08-19 09:59:47,458 [ scc.config] DEBUG Found submodule.scripts.url 2026-08-19 09:59:47,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-19 09:59:47,918 [ scc.config] DEBUG Found submodule.scripts.branch 2026-08-19 09:59:47,918 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-19 09:59:50,226 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ffa90da8250> has local changes 2026-08-19 09:59:50,226 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' - PR 196 will-moore 'Storage options only if needed' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Updating 9cc36cde..81f95f44 Previously merged: - PR 700 will-moore 'Fix parentheses in zoom level for loop for export script' - PR 692 will-moore 'colorbar lut background fix' - PR 701 will-moore 'bump nanoid to 3.3.18 with 'npm audit fix'' - PR 698 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.13' - PR 697 dependabot[bot] 'Bump postcss from 8.5.15 to 8.5.25' - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' - PR 691 dependabot[bot] 'Bump esbuild and vite' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7a798cee..3af5a346 Previously merged: - PR 559 dependabot[bot] 'Bump js-yaml and mocha' - PR 558 dependabot[bot] 'Bump fast-uri from 3.1.4 to 3.1.5' - PR 557 dependabot[bot] 'Bump socket.io-parser from 4.2.6 to 4.2.7' - PR 541 will-moore 'Only add channel to tile request string if active' - PR 556 dependabot[bot] 'Bump webpack-dev-server from 5.2.6 to 6.0.0' - PR 554 dependabot[bot] 'Bump http-proxy-middleware from 2.0.9 to 2.0.10' - PR 553 dependabot[bot] 'Bump postcss from 8.5.10 to 8.5.25' - PR 552 dependabot[bot] 'Bump tmp from 0.2.6 to 0.2.7' - PR 551 dependabot[bot] 'Bump body-parser from 1.20.5 to 1.20.6' - PR 550 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.6' - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.4 to 1.10.0' - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' - PR 535 dependabot[bot] 'Bump tmp and eslint' - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' - PR 529 will-moore 'Image id and roi id initial params' - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 471 will-moore 'Z projection disabled tooltip' - PR 562 will-moore 'Keyboard select roi' - PR 563 will-moore 'Use POST data for imgRdef save' Conflicting PRs (not included): - PR 532 will-moore 'Zarr layers' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..6a653e4 Previously merged: - PR 95 sbesson 'Remove manual CHANGELOG in favor of automated GitHub releases' - PR 94 sbesson 'Cap pandas to 2.x and clean up unused dependencies' - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' Generated by OMERO-plugins-push#46 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-08-19 09:59:50,811 [ scc.git] DEBUG [detached HEAD 5be48c3] merge master -Dorg -Ssuccess-only 2026-08-19 09:59:50,811 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2026-08-19 09:59:50,813 [ scc.merge] INFO Repository: ome/omero-plugins 2026-08-19 09:59:50,813 [ scc.merge] INFO Already up to date. 2026-08-19 09:59:50,813 [ scc.merge] INFO 2026-08-19 09:59:50,813 [ scc.merge] INFO Merged PRs: 2026-08-19 09:59:50,813 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-08-19 09:59:50,813 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-08-19 09:59:50,813 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-08-19 09:59:50,813 [ scc.merge] INFO 2026-08-19 09:59:50,813 [ scc.merge] INFO Repository: ome/minimal-omero-client 2026-08-19 09:59:50,813 [ scc.merge] INFO Already up to date. 2026-08-19 09:59:50,813 [ scc.merge] INFO 2026-08-19 09:59:50,813 [ scc.merge] INFO 2026-08-19 09:59:50,813 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2026-08-19 09:59:50,813 [ scc.merge] INFO Excluded PRs: 2026-08-19 09:59:50,813 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2026-08-19 09:59:50,813 [ scc.merge] INFO Already up to date. 2026-08-19 09:59:50,813 [ scc.merge] INFO 2026-08-19 09:59:50,813 [ scc.merge] INFO Merged PRs: 2026-08-19 09:59:50,813 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-19 09:59:50,813 [ scc.merge] INFO 2026-08-19 09:59:50,813 [ scc.merge] INFO Repository: ome/omero-cli-render 2026-08-19 09:59:50,813 [ scc.merge] INFO Excluded PRs: 2026-08-19 09:59:50,813 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2026-08-19 09:59:50,813 [ scc.merge] INFO Updating ce6e13c..68b7303 2026-08-19 09:59:50,813 [ scc.merge] INFO Previously merged: 2026-08-19 09:59:50,813 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2026-08-19 09:59:50,813 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2026-08-19 09:59:50,813 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2026-08-19 09:59:50,813 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2026-08-19 09:59:50,813 [ scc.merge] INFO 2026-08-19 09:59:50,813 [ scc.merge] INFO Merged PRs: 2026-08-19 09:59:50,813 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2026-08-19 09:59:50,813 [ scc.merge] INFO 2026-08-19 09:59:50,813 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2026-08-19 09:59:50,813 [ scc.merge] INFO Excluded PRs: 2026-08-19 09:59:50,813 [ scc.merge] INFO - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) 2026-08-19 09:59:50,813 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' (exclude comment) 2026-08-19 09:59:50,813 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2026-08-19 09:59:50,813 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2026-08-19 09:59:50,813 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-08-19 09:59:50,813 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2026-08-19 09:59:50,814 [ scc.merge] INFO Updating 11d3587..9f844b8 2026-08-19 09:59:50,814 [ scc.merge] INFO Previously merged: 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 192 jburel 'Set Omero pixel size' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-19 09:59:50,814 [ scc.merge] INFO 2026-08-19 09:59:50,814 [ scc.merge] INFO Merged PRs: 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 193 dominikl 'Only parse import uris if stated' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 196 will-moore 'Storage options only if needed' 2026-08-19 09:59:50,814 [ scc.merge] INFO 2026-08-19 09:59:50,814 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-08-19 09:59:50,814 [ scc.merge] INFO 2026-08-19 09:59:50,814 [ scc.merge] INFO Repository: ome/omero-figure 2026-08-19 09:59:50,814 [ scc.merge] INFO Updating 9cc36cde..81f95f44 2026-08-19 09:59:50,814 [ scc.merge] INFO Previously merged: 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 700 will-moore 'Fix parentheses in zoom level for loop for export script' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 692 will-moore 'colorbar lut background fix' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 701 will-moore 'bump nanoid to 3.3.18 with 'npm audit fix'' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 698 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.13' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 697 dependabot[bot] 'Bump postcss from 8.5.15 to 8.5.25' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 691 dependabot[bot] 'Bump esbuild and vite' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 685 will-moore 'Fix static files links for release build' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 683 will-moore 'Add touch support for clicking on single panel' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 680 will-moore 'Use --pre install for export script in README' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 666 will-moore 'Standalone app' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 676 dependabot[bot] 'Bump picomatch' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 669 will-moore 'Standalone python script' 2026-08-19 09:59:50,814 [ scc.merge] INFO - PR 662 will-moore 'Export script handles OME-zarr images' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 663 will-moore 'Zarr' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 667 Tom-TBT 'Label suggestion interface' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 664 Nirkan 'Handle many channels ' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-19 09:59:50,815 [ scc.merge] INFO 2026-08-19 09:59:50,815 [ scc.merge] INFO 2026-08-19 09:59:50,815 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2026-08-19 09:59:50,815 [ scc.merge] INFO Already up to date. 2026-08-19 09:59:50,815 [ scc.merge] INFO 2026-08-19 09:59:50,815 [ scc.merge] INFO Merged PRs: 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-19 09:59:50,815 [ scc.merge] INFO 2026-08-19 09:59:50,815 [ scc.merge] INFO Repository: ome/omero-gallery 2026-08-19 09:59:50,815 [ scc.merge] INFO Already up to date. 2026-08-19 09:59:50,815 [ scc.merge] INFO 2026-08-19 09:59:50,815 [ scc.merge] INFO Merged PRs: 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-08-19 09:59:50,815 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-08-19 09:59:50,816 [ scc.merge] INFO 2026-08-19 09:59:50,816 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-08-19 09:59:50,816 [ scc.merge] INFO 2026-08-19 09:59:50,816 [ scc.merge] INFO Repository: ome/omero-iviewer 2026-08-19 09:59:50,816 [ scc.merge] INFO Excluded PRs: 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2026-08-19 09:59:50,816 [ scc.merge] INFO Updating 7a798cee..3af5a346 2026-08-19 09:59:50,816 [ scc.merge] INFO Previously merged: 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 559 dependabot[bot] 'Bump js-yaml and mocha' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 558 dependabot[bot] 'Bump fast-uri from 3.1.4 to 3.1.5' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 557 dependabot[bot] 'Bump socket.io-parser from 4.2.6 to 4.2.7' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 541 will-moore 'Only add channel to tile request string if active' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 556 dependabot[bot] 'Bump webpack-dev-server from 5.2.6 to 6.0.0' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 554 dependabot[bot] 'Bump http-proxy-middleware from 2.0.9 to 2.0.10' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 553 dependabot[bot] 'Bump postcss from 8.5.10 to 8.5.25' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 552 dependabot[bot] 'Bump tmp from 0.2.6 to 0.2.7' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 551 dependabot[bot] 'Bump body-parser from 1.20.5 to 1.20.6' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 550 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.6' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.4 to 1.10.0' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 535 dependabot[bot] 'Bump tmp and eslint' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 529 will-moore 'Image id and roi id initial params' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 517 will-moore 'Fix roi link permissions' 2026-08-19 09:59:50,816 [ scc.merge] INFO - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' 2026-08-19 09:59:50,817 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2026-08-19 09:59:50,817 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-19 09:59:50,817 [ scc.merge] INFO 2026-08-19 09:59:50,817 [ scc.merge] INFO Merged PRs: 2026-08-19 09:59:50,817 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2026-08-19 09:59:50,817 [ scc.merge] INFO - PR 562 will-moore 'Keyboard select roi' 2026-08-19 09:59:50,817 [ scc.merge] INFO - PR 563 will-moore 'Use POST data for imgRdef save' 2026-08-19 09:59:50,817 [ scc.merge] INFO 2026-08-19 09:59:50,817 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-19 09:59:50,817 [ scc.merge] INFO - PR 532 will-moore 'Zarr layers' 2026-08-19 09:59:50,817 [ scc.merge] INFO 2026-08-19 09:59:50,817 [ scc.merge] INFO Repository: ome/omero-mapr 2026-08-19 09:59:50,817 [ scc.merge] INFO Excluded PRs: 2026-08-19 09:59:50,817 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2026-08-19 09:59:50,817 [ scc.merge] INFO Already up to date. 2026-08-19 09:59:50,817 [ scc.merge] INFO 2026-08-19 09:59:50,817 [ scc.merge] INFO Merged PRs: 2026-08-19 09:59:50,817 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2026-08-19 09:59:50,817 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-19 09:59:50,817 [ scc.merge] INFO 2026-08-19 09:59:50,817 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-19 09:59:50,817 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-19 09:59:50,817 [ scc.merge] INFO 2026-08-19 09:59:50,817 [ scc.merge] INFO Repository: ome/omero-metadata 2026-08-19 09:59:50,817 [ scc.merge] INFO Updating 3cd120c..6a653e4 2026-08-19 09:59:50,817 [ scc.merge] INFO Previously merged: 2026-08-19 09:59:50,817 [ scc.merge] INFO - PR 95 sbesson 'Remove manual CHANGELOG in favor of automated GitHub releases' 2026-08-19 09:59:50,817 [ scc.merge] INFO - PR 94 sbesson 'Cap pandas to 2.x and clean up unused dependencies' 2026-08-19 09:59:50,817 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-19 09:59:50,817 [ scc.merge] INFO 2026-08-19 09:59:50,817 [ scc.merge] INFO Merged PRs: 2026-08-19 09:59:50,817 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-08-19 09:59:50,817 [ scc.merge] INFO 2026-08-19 09:59:50,817 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-19 09:59:50,817 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-08-19 09:59:50,817 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-08-19 09:59:50,817 [ scc.merge] INFO 2026-08-19 09:59:50,817 [ scc.merge] INFO Repository: ome/omero-parade 2026-08-19 09:59:50,817 [ scc.merge] INFO Excluded PRs: 2026-08-19 09:59:50,817 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2026-08-19 09:59:50,817 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2026-08-19 09:59:50,817 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2026-08-19 09:59:50,817 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2026-08-19 09:59:50,817 [ scc.merge] INFO Already up to date. 2026-08-19 09:59:50,817 [ scc.merge] INFO 2026-08-19 09:59:50,817 [ scc.merge] INFO Merged PRs: 2026-08-19 09:59:50,817 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-08-19 09:59:50,817 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-08-19 09:59:50,817 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-19 09:59:50,817 [ scc.merge] INFO 2026-08-19 09:59:50,817 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2026-08-19 09:59:50,817 [ scc.merge] INFO Already up to date. 2026-08-19 09:59:50,818 [ scc.merge] INFO 2026-08-19 09:59:50,818 [ scc.merge] INFO Merged PRs: 2026-08-19 09:59:50,818 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-19 09:59:50,818 [ scc.merge] INFO 2026-08-19 09:59:50,818 [ scc.merge] INFO Repository: ome/omero-rois 2026-08-19 09:59:50,818 [ scc.merge] INFO Excluded PRs: 2026-08-19 09:59:50,818 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-08-19 09:59:50,818 [ scc.merge] INFO Updating bdfeb5e..fc9ff96 2026-08-19 09:59:50,818 [ scc.merge] INFO Previously merged: 2026-08-19 09:59:50,818 [ scc.merge] INFO - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' 2026-08-19 09:59:50,818 [ scc.merge] INFO - PR 35 will-moore 'Add roi to array functions' 2026-08-19 09:59:50,818 [ scc.merge] INFO 2026-08-19 09:59:50,818 [ scc.merge] INFO 2026-08-19 09:59:50,818 [ scc.merge] INFO Repository: ome/omero-signup 2026-08-19 09:59:50,818 [ scc.merge] INFO Already up to date. 2026-08-19 09:59:50,818 [ scc.merge] INFO 2026-08-19 09:59:50,818 [ scc.merge] INFO Merged PRs: 2026-08-19 09:59:50,818 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-19 09:59:50,818 [ scc.merge] INFO 2026-08-19 09:59:50,818 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-19 09:59:50,818 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2026-08-19 09:59:50,818 [ scc.merge] INFO 2026-08-19 09:59:50,818 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2026-08-19 09:59:50,818 [ scc.merge] INFO Excluded PRs: 2026-08-19 09:59:50,818 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2026-08-19 09:59:50,818 [ scc.merge] INFO Updating cda3ec6..c8a0015 2026-08-19 09:59:50,818 [ scc.merge] INFO Previously merged: 2026-08-19 09:59:50,818 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2026-08-19 09:59:50,818 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2026-08-19 09:59:50,818 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2026-08-19 09:59:50,818 [ scc.merge] INFO 2026-08-19 09:59:50,818 [ scc.merge] INFO Merged PRs: 2026-08-19 09:59:50,818 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-08-19 09:59:50,818 [ scc.merge] INFO 2026-08-19 09:59:50,818 [ scc.merge] INFO Repository: ome/omero-upload 2026-08-19 09:59:50,818 [ scc.merge] INFO Already up to date. 2026-08-19 09:59:50,818 [ scc.merge] INFO 2026-08-19 09:59:50,818 [ scc.merge] INFO Merged PRs: 2026-08-19 09:59:50,818 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-19 09:59:50,818 [ scc.merge] INFO 2026-08-19 09:59:50,818 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2026-08-19 09:59:50,818 [ scc.merge] INFO Updating deab817..160d894 2026-08-19 09:59:50,818 [ scc.merge] INFO Previously merged: 2026-08-19 09:59:50,818 [ scc.merge] INFO - PR 20 jburel 'Build' 2026-08-19 09:59:50,818 [ scc.merge] INFO 2026-08-19 09:59:50,818 [ scc.merge] INFO Merged PRs: 2026-08-19 09:59:50,818 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-19 09:59:50,818 [ scc.merge] INFO 2026-08-19 09:59:50,818 [ scc.merge] INFO Repository: ome/omero-web-zarr 2026-08-19 09:59:50,818 [ scc.merge] INFO Excluded PRs: 2026-08-19 09:59:50,818 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2026-08-19 09:59:50,819 [ scc.merge] INFO Updating 8f3c313..4e1e685 2026-08-19 09:59:50,819 [ scc.merge] INFO Previously merged: 2026-08-19 09:59:50,819 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2026-08-19 09:59:50,819 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2026-08-19 09:59:50,819 [ scc.merge] INFO 2026-08-19 09:59:50,819 [ scc.merge] INFO Merged PRs: 2026-08-19 09:59:50,819 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2026-08-19 09:59:50,819 [ scc.merge] INFO 2026-08-19 09:59:50,819 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-19 09:59:50,819 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-08-19 09:59:50,819 [ scc.merge] INFO 2026-08-19 09:59:50,819 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2026-08-19 09:59:50,819 [ scc.merge] INFO Already up to date. 2026-08-19 09:59:50,819 [ scc.merge] INFO 2026-08-19 09:59:50,819 [ scc.merge] INFO Merged PRs: 2026-08-19 09:59:50,819 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-19 09:59:50,819 [ scc.merge] INFO 2026-08-19 09:59:50,819 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2026-08-19 09:59:50,819 [ scc.merge] INFO Already up to date. 2026-08-19 09:59:50,819 [ scc.merge] INFO 2026-08-19 09:59:50,819 [ scc.merge] INFO Merged PRs: 2026-08-19 09:59:50,819 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-19 09:59:50,819 [ scc.merge] INFO 2026-08-19 09:59:50,819 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2026-08-19 09:59:50,819 [ scc.merge] INFO Already up to date. 2026-08-19 09:59:50,819 [ scc.merge] INFO 2026-08-19 09:59:50,819 [ scc.merge] INFO 2026-08-19 09:59:50,819 [ scc.merge] INFO Repository: ome/scripts 2026-08-19 09:59:50,819 [ scc.merge] INFO Updating 4b4c755..5b4d768 2026-08-19 09:59:50,819 [ scc.merge] INFO Previously merged: 2026-08-19 09:59:50,819 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-08-19 09:59:50,819 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-08-19 09:59:50,819 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-08-19 09:59:50,819 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-08-19 09:59:50,819 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2026-08-19 09:59:50,819 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2026-08-19 09:59:50,819 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2026-08-19 09:59:50,819 [ scc.merge] INFO 2026-08-19 09:59:50,819 [ scc.merge] INFO Merged PRs: 2026-08-19 09:59:50,819 [ scc.merge] INFO - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' 2026-08-19 09:59:50,819 [ scc.merge] INFO 2026-08-19 09:59:50,819 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-08-19 09:59:50,819 [ scc.git] DEBUG Calling 'git remote' 2026-08-19 09:59:50,833 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-08-19 09:59:50,833 [ scc.git] DEBUG Calling 'git remote' 2026-08-19 09:59:50,852 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:59:50,852 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-08-19 09:59:50,852 [ scc.git] DEBUG Calling 'git remote' 2026-08-19 09:59:50,871 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:59:50,871 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-08-19 09:59:50,871 [ scc.git] DEBUG Calling 'git remote' 2026-08-19 09:59:50,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:59:50,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-08-19 09:59:50,888 [ scc.git] DEBUG Calling 'git remote' 2026-08-19 09:59:50,904 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:59:50,904 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-08-19 09:59:50,904 [ scc.git] DEBUG Calling 'git remote' 2026-08-19 09:59:50,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:59:50,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-08-19 09:59:50,920 [ scc.git] DEBUG Calling 'git remote' 2026-08-19 09:59:50,938 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:59:50,938 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-08-19 09:59:50,938 [ scc.git] DEBUG Calling 'git remote' 2026-08-19 09:59:50,954 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:59:50,954 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-08-19 09:59:50,954 [ scc.git] DEBUG Calling 'git remote' 2026-08-19 09:59:50,970 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:59:50,970 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-08-19 09:59:50,970 [ scc.git] DEBUG Calling 'git remote' 2026-08-19 09:59:50,987 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:59:50,987 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-08-19 09:59:50,988 [ scc.git] DEBUG Calling 'git remote' 2026-08-19 09:59:51,005 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:59:51,005 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-08-19 09:59:51,006 [ scc.git] DEBUG Calling 'git remote' 2026-08-19 09:59:51,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:59:51,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-08-19 09:59:51,020 [ scc.git] DEBUG Calling 'git remote' 2026-08-19 09:59:51,036 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:59:51,036 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-08-19 09:59:51,036 [ scc.git] DEBUG Calling 'git remote' 2026-08-19 09:59:51,051 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:59:51,051 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-08-19 09:59:51,051 [ scc.git] DEBUG Calling 'git remote' 2026-08-19 09:59:51,068 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:59:51,068 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-08-19 09:59:51,068 [ scc.git] DEBUG Calling 'git remote' 2026-08-19 09:59:51,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:59:51,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-08-19 09:59:51,085 [ scc.git] DEBUG Calling 'git remote' 2026-08-19 09:59:51,102 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:59:51,103 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-08-19 09:59:51,103 [ scc.git] DEBUG Calling 'git remote' 2026-08-19 09:59:51,121 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:59:51,121 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-08-19 09:59:51,121 [ scc.git] DEBUG Calling 'git remote' 2026-08-19 09:59:51,144 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:59:51,144 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-08-19 09:59:51,144 [ scc.git] DEBUG Calling 'git remote' 2026-08-19 09:59:51,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:59:51,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-08-19 09:59:51,160 [ scc.git] DEBUG Calling 'git remote' 2026-08-19 09:59:51,175 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:59:51,175 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-08-19 09:59:51,175 [ scc.git] DEBUG Calling 'git remote' 2026-08-19 09:59:51,198 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-19 09:59:51,198 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-08-19 09:59:51,198 [ scc.git] DEBUG Calling 'git remote' 2026-08-19 09:59:51,213 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '8.0.1.rc2' to '8.0.1rc2' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '8.0.1.rc2' to '8.0.1rc2' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.11.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 641251a] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798cee nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD 2c0fc5a] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-08-19 10:01:02,002 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-08-19 10:01:12,239 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-08-19 10:01:14,876 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-08-19 10:01:20,062 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-08-19 10:02:16,654 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS