Skipping 225 KB..
Full LogTestTestTestTestTestTestTestTestTestTestTestTestTest
2025-08-24 00:41:26,263 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:26,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None
2025-08-24 00:41:26,788 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:26,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2
2025-08-24 00:41:26,989 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-24 00:41:27,240 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:27,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2025-08-24 00:41:27,765 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:28,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2025-08-24 00:41:28,278 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:28,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-08-24 00:41:28,831 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:29,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-24 00:41:29,346 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:29,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-08-24 00:41:29,882 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:30,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2025-08-24 00:41:30,101 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2025-08-24 00:41:30,101 [ scc.repo] DEBUG ## Branches found:
2025-08-24 00:41:30,101 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-08-24 00:41:30,102 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:41:30,102 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:41:30,104 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-24 00:41:30,107 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-24 00:41:30,107 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-24 00:41:30,110 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-24 00:41:30,114 [ scc.git] DEBUG Already up to date.
2025-08-24 00:41:30,114 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2025-08-24 00:41:30,414 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-08-24 00:41:30,415 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2025-08-24 00:41:30,419 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head'
2025-08-24 00:41:30,702 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-08-24 00:41:30,702 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD
2025-08-24 00:41:30,706 [ scc.git] DEBUG ## Unique users: []
2025-08-24 00:41:30,706 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:41:30,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:41:30,708 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-08-24 00:41:30,713 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:41:30,715 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-08-24 00:41:30,725 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-24 00:41:30,728 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2025-08-24 00:41:30,728 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2025-08-24 00:41:30,728 [ scc.git] DEBUG requirements.txt | 2 +-
2025-08-24 00:41:30,728 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2025-08-24 00:41:30,728 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2025-08-24 00:41:30,728 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2025-08-24 00:41:30,731 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:30,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:41:30,932 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-08-24 00:41:30,936 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:41:30,938 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-08-24 00:41:30,948 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-24 00:41:30,951 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-08-24 00:41:30,951 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-08-24 00:41:31,183 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:31,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:41:31,385 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-24 00:41:31,426 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:41:31,426 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:41:31,429 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-24 00:41:31,468 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-24 00:41:31,472 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2dc2af6510> has no local changes
2025-08-24 00:41:31,472 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Generated by OMERO-plugins-push#513 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/)'
2025-08-24 00:41:31,479 [ scc.git] DEBUG [detached HEAD 79f36a7] merge master -Dorg -Ssuccess-only
2025-08-24 00:41:31,480 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:41:31,480 [ scc.repo] DEBUG ## PRs found:
2025-08-24 00:41:31,637 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:31,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2025-08-24 00:41:32,242 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:32,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2025-08-24 00:41:32,826 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:33,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2025-08-24 00:41:33,322 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:33,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-08-24 00:41:33,879 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:34,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-24 00:41:34,406 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:34,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-08-24 00:41:34,998 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:35,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2025-08-24 00:41:35,221 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-08-24 00:41:35,473 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:35,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2025-08-24 00:41:36,003 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:36,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2025-08-24 00:41:36,539 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:36,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-08-24 00:41:37,095 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:37,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-24 00:41:37,600 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:37,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-08-24 00:41:38,087 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:38,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2025-08-24 00:41:38,296 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-08-24 00:41:38,296 [ scc.repo] DEBUG ## Branches found:
2025-08-24 00:41:38,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-08-24 00:41:38,296 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:41:38,296 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:41:38,299 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-24 00:41:38,302 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-24 00:41:38,302 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-24 00:41:38,305 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-24 00:41:38,313 [ scc.git] DEBUG Updating 3cd120c..55060a2
2025-08-24 00:41:38,548 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:39,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None
2025-08-24 00:41:39,010 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2025-08-24 00:41:39,296 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-08-24 00:41:39,296 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2025-08-24 00:41:39,301 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2025-08-24 00:41:39,581 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-08-24 00:41:39,582 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2025-08-24 00:41:39,586 [ scc.git] DEBUG ## Unique users: []
2025-08-24 00:41:39,586 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:41:39,586 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:41:39,588 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-08-24 00:41:39,593 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:41:39,595 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-08-24 00:41:39,609 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2025-08-24 00:41:39,609 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2025-08-24 00:41:39,609 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-08-24 00:41:39,609 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-08-24 00:41:39,609 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-24 00:41:39,609 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-24 00:41:39,612 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-08-24 00:41:39,617 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-08-24 00:41:39,619 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:39,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:41:39,836 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-08-24 00:41:39,840 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501'
2025-08-24 00:41:39,843 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#513](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/populate.py
- src/omero_metadata/cli.py
--conflicts
2025-08-24 00:41:39,846 [ scc.config] DEBUG Found github.token
2025-08-24 00:41:39,846 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2025-08-24 00:41:39,846 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2025-08-24 00:41:39,850 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:41:39,852 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2025-08-24 00:41:39,868 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-08-24 00:41:39,868 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-08-24 00:41:39,868 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2025-08-24 00:41:39,868 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-24 00:41:39,869 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-24 00:41:39,872 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-08-24 00:41:39,877 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-08-24 00:41:40,088 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:40,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:41:40,293 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7'
2025-08-24 00:41:40,297 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501'
2025-08-24 00:41:40,300 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#513](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2025-08-24 00:41:40,303 [ scc.config] DEBUG Found github.token
2025-08-24 00:41:40,303 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2025-08-24 00:41:40,303 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-24 00:41:40,345 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:41:40,345 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:41:40,347 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-24 00:41:40,386 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-24 00:41:40,391 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2dc5057a10> has no local changes
2025-08-24 00:41:40,391 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#513 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/)'
2025-08-24 00:41:40,398 [ scc.git] DEBUG [detached HEAD af9b365] merge master -Dorg -Ssuccess-only
2025-08-24 00:41:40,398 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:41:40,398 [ scc.repo] DEBUG ## PRs found:
2025-08-24 00:41:40,545 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:40,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2025-08-24 00:41:41,181 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:41,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None
2025-08-24 00:41:41,675 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:42,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-08-24 00:41:42,272 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:42,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-24 00:41:42,790 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:43,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-24 00:41:43,284 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:43,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-08-24 00:41:43,808 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:44,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2
2025-08-24 00:41:44,036 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-24 00:41:44,288 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:44,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None
2025-08-24 00:41:44,548 [ scc.repo] DEBUG # ... Include label: dependencies
2025-08-24 00:41:44,801 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:45,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-08-24 00:41:45,399 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:45,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-24 00:41:45,942 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:46,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-24 00:41:46,524 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:46,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-08-24 00:41:47,142 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:47,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2
2025-08-24 00:41:47,374 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-08-24 00:41:47,626 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:47,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None
2025-08-24 00:41:47,882 [ scc.repo] DEBUG # ... Include label: dependencies
2025-08-24 00:41:48,135 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:48,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-08-24 00:41:48,765 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:49,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-24 00:41:49,330 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:49,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-24 00:41:49,861 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:50,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-08-24 00:41:50,452 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:50,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2
2025-08-24 00:41:50,667 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-08-24 00:41:50,920 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:51,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None
2025-08-24 00:41:51,419 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:51,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2025-08-24 00:41:51,949 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:52,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2025-08-24 00:41:52,437 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:52,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2025-08-24 00:41:52,998 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:53,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2025-08-24 00:41:53,489 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:53,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2025-08-24 00:41:53,974 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:54,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2025-08-24 00:41:54,256 [ scc.repo] DEBUG ## Branches found:
2025-08-24 00:41:54,256 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-08-24 00:41:54,257 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:41:54,257 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:41:54,259 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-24 00:41:54,262 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-24 00:41:54,262 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-24 00:41:54,265 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-24 00:41:54,268 [ scc.git] DEBUG Already up to date.
2025-08-24 00:41:54,268 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head'
2025-08-24 00:41:54,552 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-08-24 00:41:54,552 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD
2025-08-24 00:41:54,557 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head'
2025-08-24 00:41:54,832 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-08-24 00:41:54,832 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD
2025-08-24 00:41:54,837 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head'
2025-08-24 00:41:55,121 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-08-24 00:41:55,121 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD
2025-08-24 00:41:55,125 [ scc.git] DEBUG ## Unique users: []
2025-08-24 00:41:55,125 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:41:55,125 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:41:55,128 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0'
2025-08-24 00:41:55,131 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:41:55,133 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0'
2025-08-24 00:41:55,142 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-24 00:41:55,146 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++----------------------------
2025-08-24 00:41:55,146 [ scc.git] DEBUG package.json | 2 +-
2025-08-24 00:41:55,146 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-)
2025-08-24 00:41:55,148 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:55,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:41:55,330 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80'
2025-08-24 00:41:55,333 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:41:55,336 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80'
2025-08-24 00:41:55,346 [ scc.git] DEBUG Auto-merging package-lock.json
2025-08-24 00:41:55,346 [ scc.git] DEBUG Auto-merging package.json
2025-08-24 00:41:55,347 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-24 00:41:55,351 [ scc.git] DEBUG package-lock.json | 18 ++++++++++--------
2025-08-24 00:41:55,351 [ scc.git] DEBUG package.json | 2 +-
2025-08-24 00:41:55,351 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-)
2025-08-24 00:41:55,582 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:55,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:41:55,773 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-08-24 00:41:55,777 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:41:55,779 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-08-24 00:41:55,788 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-24 00:41:55,791 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-08-24 00:41:55,791 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-08-24 00:41:56,026 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:56,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:41:56,218 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-24 00:41:56,260 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:41:56,261 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:41:56,263 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-24 00:41:56,303 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-24 00:41:56,308 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2dc2a398d0> has no local changes
2025-08-24 00:41:56,308 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Generated by OMERO-plugins-push#513 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/)'
2025-08-24 00:41:56,314 [ scc.git] DEBUG [detached HEAD b83b0fe] merge master -Dorg -Ssuccess-only
2025-08-24 00:41:56,315 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:41:56,315 [ scc.repo] DEBUG ## PRs found:
2025-08-24 00:41:56,470 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:56,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 2
2025-08-24 00:41:56,707 [ scc.repo] DEBUG ## Branches found:
2025-08-24 00:41:56,707 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-08-24 00:41:56,707 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:41:56,707 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:41:56,710 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-24 00:41:56,712 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-24 00:41:56,712 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-24 00:41:56,715 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-24 00:41:56,718 [ scc.git] DEBUG Already up to date.
2025-08-24 00:41:56,718 [ scc.git] DEBUG ## Unique users: []
2025-08-24 00:41:56,718 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:41:56,719 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:41:56,721 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-24 00:41:56,761 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:41:56,761 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:41:56,763 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-24 00:41:56,801 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-24 00:41:56,805 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2dc0037cd0> has no local changes
2025-08-24 00:41:56,805 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Already up to date.
Generated by OMERO-plugins-push#513 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/)'
2025-08-24 00:41:56,811 [ scc.git] DEBUG [detached HEAD b93acd1] merge master -Dorg -Ssuccess-only
2025-08-24 00:41:56,811 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:41:56,811 [ scc.repo] DEBUG ## PRs found:
2025-08-24 00:41:56,959 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:57,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2025-08-24 00:41:57,527 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:57,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None
2025-08-24 00:41:58,079 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:58,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None
2025-08-24 00:41:58,579 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:58,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-08-24 00:41:59,175 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:59,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-24 00:41:59,724 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:41:59,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-24 00:42:00,243 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:00,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-08-24 00:42:00,766 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:00,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None
2025-08-24 00:42:01,250 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:01,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-08-24 00:42:01,745 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:01,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None
2025-08-24 00:42:01,957 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions'
2025-08-24 00:42:02,209 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:02,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None
2025-08-24 00:42:02,492 [ scc.repo] DEBUG ## Branches found:
2025-08-24 00:42:02,492 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-08-24 00:42:02,492 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:02,492 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:02,494 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-24 00:42:02,497 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-24 00:42:02,497 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-24 00:42:02,500 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-24 00:42:02,503 [ scc.git] DEBUG Already up to date.
2025-08-24 00:42:02,503 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head'
2025-08-24 00:42:02,790 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2025-08-24 00:42:02,790 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD
2025-08-24 00:42:02,794 [ scc.git] DEBUG ## Unique users: []
2025-08-24 00:42:02,794 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:02,795 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:02,797 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3'
2025-08-24 00:42:02,800 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:02,802 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3'
2025-08-24 00:42:02,811 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-24 00:42:02,814 [ scc.git] DEBUG setup.py | 4 +-
2025-08-24 00:42:02,814 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 +
2025-08-24 00:42:02,814 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++--
2025-08-24 00:42:02,814 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-)
2025-08-24 00:42:02,817 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:03,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:03,022 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-24 00:42:03,064 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:03,064 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:03,067 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-24 00:42:03,108 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-24 00:42:03,111 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2dc29fde50> has no local changes
2025-08-24 00:42:03,112 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 33 jo-mueller 'Add roi to array functions'
Generated by OMERO-plugins-push#513 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/)'
2025-08-24 00:42:03,118 [ scc.git] DEBUG [detached HEAD a3614a1] merge master -Dorg -Ssuccess-only
2025-08-24 00:42:03,118 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:03,118 [ scc.repo] DEBUG ## PRs found:
2025-08-24 00:42:03,274 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:03,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2025-08-24 00:42:03,843 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:04,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2025-08-24 00:42:04,356 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:04,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2025-08-24 00:42:04,859 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:05,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-08-24 00:42:05,458 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:05,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-24 00:42:05,977 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:06,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-08-24 00:42:06,524 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:06,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2025-08-24 00:42:06,740 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2025-08-24 00:42:06,740 [ scc.repo] DEBUG ## Branches found:
2025-08-24 00:42:06,740 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-08-24 00:42:06,740 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:06,740 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:06,743 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-24 00:42:06,745 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-24 00:42:06,746 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-24 00:42:06,749 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-24 00:42:06,752 [ scc.git] DEBUG Already up to date.
2025-08-24 00:42:06,752 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2025-08-24 00:42:07,040 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2025-08-24 00:42:07,041 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2025-08-24 00:42:07,045 [ scc.git] DEBUG ## Unique users: []
2025-08-24 00:42:07,045 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:07,045 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:07,047 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-08-24 00:42:07,051 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:07,053 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-08-24 00:42:07,062 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2025-08-24 00:42:07,063 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2025-08-24 00:42:07,063 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2025-08-24 00:42:07,063 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2025-08-24 00:42:07,063 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2025-08-24 00:42:07,063 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2025-08-24 00:42:07,063 [ scc.git] DEBUG Auto-merging setup.py
2025-08-24 00:42:07,063 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2025-08-24 00:42:07,063 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-24 00:42:07,063 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-24 00:42:07,066 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e'
2025-08-24 00:42:07,070 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build
2025-08-24 00:42:07,073 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:07,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:07,268 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-08-24 00:42:07,272 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e'
2025-08-24 00:42:07,275 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#513](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_signup/signup_settings.py
- omero_signup/views.py
- setup.py
- omero_signup/urls.py
--conflicts
2025-08-24 00:42:07,277 [ scc.config] DEBUG Found github.token
2025-08-24 00:42:07,277 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2025-08-24 00:42:07,277 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-24 00:42:07,318 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:07,318 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:07,320 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-24 00:42:07,361 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-24 00:42:07,365 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2dc5506cd0> has no local changes
2025-08-24 00:42:07,365 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#513 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/)'
2025-08-24 00:42:07,372 [ scc.git] DEBUG [detached HEAD a250bae] merge master -Dorg -Ssuccess-only
2025-08-24 00:42:07,372 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:07,372 [ scc.repo] DEBUG ## PRs found:
2025-08-24 00:42:07,520 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:07,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2025-08-24 00:42:08,177 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:08,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/76 HTTP/1.1" 200 None
2025-08-24 00:42:08,695 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:09,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None
2025-08-24 00:42:09,302 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:09,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-24 00:42:09,831 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:10,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-24 00:42:10,385 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:10,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None
2025-08-24 00:42:10,998 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:11,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6?per_page=1 HTTP/1.1" 200 2
2025-08-24 00:42:11,214 [ scc.repo] DEBUG - PR 76 will-moore 'Run cli deps'
2025-08-24 00:42:11,466 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:11,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None
2025-08-24 00:42:12,016 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:12,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None
2025-08-24 00:42:12,550 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:12,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None
2025-08-24 00:42:13,120 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:13,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-24 00:42:13,639 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:13,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-24 00:42:14,165 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:14,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None
2025-08-24 00:42:14,721 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:14,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None
2025-08-24 00:42:15,226 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:15,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2025-08-24 00:42:15,735 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:15,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2025-08-24 00:42:16,206 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:16,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2025-08-24 00:42:16,770 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:17,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-24 00:42:17,265 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:17,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2025-08-24 00:42:17,824 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:18,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2025-08-24 00:42:18,064 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2025-08-24 00:42:18,064 [ scc.repo] DEBUG ## Branches found:
2025-08-24 00:42:18,064 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-08-24 00:42:18,064 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:18,064 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:18,067 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-24 00:42:18,069 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-24 00:42:18,070 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-24 00:42:18,072 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-24 00:42:18,076 [ scc.git] DEBUG Already up to date.
2025-08-24 00:42:18,076 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2025-08-24 00:42:18,367 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-08-24 00:42:18,367 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD
2025-08-24 00:42:18,371 [ scc.git] DEBUG Calling 'git fetch origin pull/76/head'
2025-08-24 00:42:18,658 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-08-24 00:42:18,658 [ scc.git] DEBUG * branch refs/pull/76/head -> FETCH_HEAD
2025-08-24 00:42:18,663 [ scc.git] DEBUG ## Unique users: []
2025-08-24 00:42:18,663 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:18,663 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:18,666 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2025-08-24 00:42:18,670 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:18,672 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2025-08-24 00:42:18,685 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-24 00:42:18,689 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++
2025-08-24 00:42:18,689 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++
2025-08-24 00:42:18,690 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++
2025-08-24 00:42:18,690 [ scc.git] DEBUG idr/70-reset-password.sh | 1 +
2025-08-24 00:42:18,690 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 +
2025-08-24 00:42:18,690 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 +
2025-08-24 00:42:18,690 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++
2025-08-24 00:42:18,690 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++
2025-08-24 00:42:18,690 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++
2025-08-24 00:42:18,690 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2025-08-24 00:42:18,690 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++
2025-08-24 00:42:18,692 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++
2025-08-24 00:42:18,692 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++
2025-08-24 00:42:18,692 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++
2025-08-24 00:42:18,692 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:18,692 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++
2025-08-24 00:42:18,692 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++
2025-08-24 00:42:18,692 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++
2025-08-24 00:42:18,692 [ scc.git] DEBUG idr/omero/Dockerfile | 3 +
2025-08-24 00:42:18,692 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++
2025-08-24 00:42:18,692 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++
2025-08-24 00:42:18,693 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++
2025-08-24 00:42:18,693 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++
2025-08-24 00:42:18,693 [ scc.git] DEBUG 22 files changed, 824 insertions(+)
2025-08-24 00:42:18,693 [ scc.git] DEBUG create mode 100644 idr-compose.yml
2025-08-24 00:42:18,693 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml
2025-08-24 00:42:18,693 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh
2025-08-24 00:42:18,693 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh
2025-08-24 00:42:18,693 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf
2025-08-24 00:42:18,693 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf
2025-08-24 00:42:18,693 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2025-08-24 00:42:18,693 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2025-08-24 00:42:18,693 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf
2025-08-24 00:42:18,693 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2025-08-24 00:42:18,693 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2025-08-24 00:42:18,693 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2025-08-24 00:42:18,693 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2025-08-24 00:42:18,693 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2025-08-24 00:42:18,693 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2025-08-24 00:42:18,693 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2025-08-24 00:42:18,693 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf
2025-08-24 00:42:18,693 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile
2025-08-24 00:42:18,693 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml
2025-08-24 00:42:18,693 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile
2025-08-24 00:42:18,693 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile
2025-08-24 00:42:18,693 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml
2025-08-24 00:42:18,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:18,875 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6'
2025-08-24 00:42:18,880 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:18,883 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 76 (Run cli deps) bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6'
2025-08-24 00:42:18,893 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-24 00:42:18,896 [ scc.git] DEBUG docker | 1 +
2025-08-24 00:42:18,896 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2025-08-24 00:42:19,128 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:19,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:19,360 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-24 00:42:19,404 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:19,404 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:19,406 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-24 00:42:19,447 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-24 00:42:19,452 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2dc292fb90> has no local changes
2025-08-24 00:42:19,452 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
- PR 76 will-moore 'Run cli deps'
Generated by OMERO-plugins-push#513 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/)'
2025-08-24 00:42:19,459 [ scc.git] DEBUG [detached HEAD c24cadc] merge master -Dorg -Ssuccess-only
2025-08-24 00:42:19,459 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:19,459 [ scc.repo] DEBUG ## PRs found:
2025-08-24 00:42:19,613 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:19,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2
2025-08-24 00:42:19,828 [ scc.repo] DEBUG ## Branches found:
2025-08-24 00:42:19,828 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-08-24 00:42:19,828 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:19,828 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:19,830 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-24 00:42:19,833 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-24 00:42:19,833 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-24 00:42:19,836 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-24 00:42:19,839 [ scc.git] DEBUG Already up to date.
2025-08-24 00:42:19,839 [ scc.git] DEBUG ## Unique users: []
2025-08-24 00:42:19,839 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:19,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:19,841 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-24 00:42:19,881 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:19,881 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:19,884 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-24 00:42:19,922 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-24 00:42:19,925 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2dc005a1d0> has no local changes
2025-08-24 00:42:19,926 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Already up to date.
Generated by OMERO-plugins-push#513 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/)'
2025-08-24 00:42:19,932 [ scc.git] DEBUG [detached HEAD 59b3ddd] merge master -Dorg -Ssuccess-only
2025-08-24 00:42:19,932 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:19,932 [ scc.repo] DEBUG ## PRs found:
2025-08-24 00:42:20,080 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:20,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2
2025-08-24 00:42:20,294 [ scc.repo] DEBUG ## Branches found:
2025-08-24 00:42:20,294 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-08-24 00:42:20,294 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:20,294 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:20,297 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-24 00:42:20,299 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-24 00:42:20,299 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-24 00:42:20,302 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-24 00:42:20,310 [ scc.git] DEBUG Updating deab817..160d894
2025-08-24 00:42:20,546 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:20,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None
2025-08-24 00:42:20,999 [ scc.git] DEBUG ## Unique users: []
2025-08-24 00:42:20,999 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:21,000 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:21,002 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-24 00:42:21,046 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:21,046 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:21,048 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-24 00:42:21,089 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-24 00:42:21,092 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2dc2c0f990> has no local changes
2025-08-24 00:42:21,092 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Generated by OMERO-plugins-push#513 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/)'
2025-08-24 00:42:21,099 [ scc.git] DEBUG [detached HEAD 2a2cbbb] merge master -Dorg -Ssuccess-only
2025-08-24 00:42:21,099 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:21,099 [ scc.git] INFO Overriding base-branch from master to main
2025-08-24 00:42:21,099 [ scc.repo] DEBUG ## PRs found:
2025-08-24 00:42:21,251 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:21,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2025-08-24 00:42:21,777 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:22,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None
2025-08-24 00:42:22,287 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:22,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None
2025-08-24 00:42:22,805 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:23,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None
2025-08-24 00:42:23,381 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:23,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-24 00:42:23,924 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:24,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-24 00:42:24,432 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:24,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2025-08-24 00:42:24,972 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:25,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2025-08-24 00:42:25,463 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:25,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2025-08-24 00:42:25,937 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:26,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-08-24 00:42:26,483 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:26,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-24 00:42:26,985 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:27,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-08-24 00:42:27,528 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:27,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2025-08-24 00:42:27,754 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-08-24 00:42:27,754 [ scc.repo] DEBUG ## Branches found:
2025-08-24 00:42:27,754 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-08-24 00:42:27,755 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:27,755 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:27,757 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2025-08-24 00:42:27,760 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-24 00:42:27,760 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2025-08-24 00:42:27,763 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2025-08-24 00:42:27,766 [ scc.git] DEBUG Already up to date.
2025-08-24 00:42:27,766 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2025-08-24 00:42:28,044 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2025-08-24 00:42:28,045 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2025-08-24 00:42:28,049 [ scc.git] DEBUG ## Unique users: []
2025-08-24 00:42:28,049 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:28,049 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:28,051 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-08-24 00:42:28,055 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:28,057 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-08-24 00:42:28,065 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2025-08-24 00:42:28,065 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2025-08-24 00:42:28,065 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-24 00:42:28,065 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-24 00:42:28,068 [ scc.git] DEBUG Calling 'git reset --hard 8f3c31388de8a7c44f18a6f0e20ea41d35fae041'
2025-08-24 00:42:28,073 [ scc.git] DEBUG HEAD is now at 8f3c313 Merge pull request #17 from jburel/build
2025-08-24 00:42:28,075 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:28,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:28,267 [ scc.git] DEBUG Calling 'git merge-base 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-08-24 00:42:28,271 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..8f3c31388de8a7c44f18a6f0e20ea41d35fae041'
2025-08-24 00:42:28,274 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#513](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2025-08-24 00:42:28,276 [ scc.config] DEBUG Found github.token
2025-08-24 00:42:28,276 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2025-08-24 00:42:28,276 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-24 00:42:28,319 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:28,319 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:28,321 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-24 00:42:28,362 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-24 00:42:28,366 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2dc2bef510> has no local changes
2025-08-24 00:42:28,366 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#513 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/)'
2025-08-24 00:42:28,373 [ scc.git] DEBUG [detached HEAD e842333] merge master -Dorg -Ssuccess-only
2025-08-24 00:42:28,373 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:28,373 [ scc.repo] DEBUG ## PRs found:
2025-08-24 00:42:28,520 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:28,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2
2025-08-24 00:42:28,736 [ scc.repo] DEBUG ## Branches found:
2025-08-24 00:42:28,736 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-08-24 00:42:28,736 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:28,736 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:28,739 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-24 00:42:28,741 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-24 00:42:28,741 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-24 00:42:28,744 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-24 00:42:28,747 [ scc.git] DEBUG Already up to date.
2025-08-24 00:42:28,747 [ scc.git] DEBUG ## Unique users: []
2025-08-24 00:42:28,747 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:28,747 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:28,750 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-24 00:42:28,791 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:28,791 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:28,793 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-24 00:42:28,831 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-24 00:42:28,834 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2dc2a1c0d0> has no local changes
2025-08-24 00:42:28,834 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Already up to date.
Generated by OMERO-plugins-push#513 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/)'
2025-08-24 00:42:28,841 [ scc.git] DEBUG [detached HEAD 915c136] merge master -Dorg -Ssuccess-only
2025-08-24 00:42:28,841 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:28,841 [ scc.repo] DEBUG ## PRs found:
2025-08-24 00:42:28,989 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:29,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2
2025-08-24 00:42:29,184 [ scc.repo] DEBUG ## Branches found:
2025-08-24 00:42:29,184 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-08-24 00:42:29,184 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:29,184 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:29,187 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-24 00:42:29,189 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-24 00:42:29,189 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-24 00:42:29,192 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-24 00:42:29,195 [ scc.git] DEBUG Already up to date.
2025-08-24 00:42:29,195 [ scc.git] DEBUG ## Unique users: []
2025-08-24 00:42:29,195 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:29,195 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:29,198 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-24 00:42:29,240 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:29,240 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:29,242 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-24 00:42:29,284 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-24 00:42:29,287 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2dc00a6290> has no local changes
2025-08-24 00:42:29,287 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Already up to date.
Generated by OMERO-plugins-push#513 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/)'
2025-08-24 00:42:29,294 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:29,295 [ scc.git] DEBUG [detached HEAD f1c7611] merge master -Dorg -Ssuccess-only
2025-08-24 00:42:29,295 [ scc.repo] DEBUG ## PRs found:
2025-08-24 00:42:29,436 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:29,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2025-08-24 00:42:29,960 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:30,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2025-08-24 00:42:30,463 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:30,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2025-08-24 00:42:30,983 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:31,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-08-24 00:42:31,544 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:31,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-24 00:42:32,053 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:32,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-08-24 00:42:32,575 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:32,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2025-08-24 00:42:32,780 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2025-08-24 00:42:32,780 [ scc.repo] DEBUG ## Branches found:
2025-08-24 00:42:32,780 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-08-24 00:42:32,780 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:32,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:32,783 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-24 00:42:32,785 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-24 00:42:32,785 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-24 00:42:32,788 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-24 00:42:32,791 [ scc.git] DEBUG Already up to date.
2025-08-24 00:42:32,791 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2025-08-24 00:42:33,069 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2025-08-24 00:42:33,070 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2025-08-24 00:42:33,074 [ scc.git] DEBUG ## Unique users: []
2025-08-24 00:42:33,074 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:33,074 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:33,076 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-08-24 00:42:33,079 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:33,081 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-08-24 00:42:33,091 [ scc.git] DEBUG Auto-merging Dockerfile
2025-08-24 00:42:33,091 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2025-08-24 00:42:33,091 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-24 00:42:33,091 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-24 00:42:33,095 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-08-24 00:42:33,099 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2025-08-24 00:42:33,102 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:33,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:33,333 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-08-24 00:42:33,336 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-08-24 00:42:33,339 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#513](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2025-08-24 00:42:33,341 [ scc.config] DEBUG Found github.token
2025-08-24 00:42:33,342 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2025-08-24 00:42:33,342 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-24 00:42:33,383 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:33,383 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:33,385 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-24 00:42:33,426 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-24 00:42:33,430 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2dc2af5710> has no local changes
2025-08-24 00:42:33,431 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#513 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/)'
2025-08-24 00:42:33,437 [ scc.git] DEBUG [detached HEAD d57e0e7] merge master -Dorg -Ssuccess-only
2025-08-24 00:42:33,438 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:33,438 [ scc.git] INFO Overriding base-branch from master to develop
2025-08-24 00:42:33,438 [ scc.repo] DEBUG ## PRs found:
2025-08-24 00:42:33,586 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:33,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2025-08-24 00:42:34,162 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:34,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2025-08-24 00:42:34,688 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:34,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2025-08-24 00:42:35,186 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:35,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-08-24 00:42:35,684 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:35,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-24 00:42:36,203 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:36,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-24 00:42:36,740 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:37,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-08-24 00:42:37,291 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:37,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2025-08-24 00:42:37,537 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-08-24 00:42:37,789 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:38,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2025-08-24 00:42:38,343 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:38,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2025-08-24 00:42:38,834 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:39,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-08-24 00:42:39,315 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:39,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-24 00:42:39,816 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:40,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-08-24 00:42:40,356 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:40,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2025-08-24 00:42:40,548 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-08-24 00:42:40,800 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:41,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2025-08-24 00:42:41,346 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:41,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2025-08-24 00:42:41,893 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:42,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2025-08-24 00:42:42,384 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:42,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2025-08-24 00:42:42,662 [ scc.repo] DEBUG ## Branches found:
2025-08-24 00:42:42,662 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-08-24 00:42:42,662 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:42,662 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:42,665 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2025-08-24 00:42:42,667 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-24 00:42:42,667 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2025-08-24 00:42:42,671 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2025-08-24 00:42:42,682 [ scc.git] DEBUG Updating 4b4c755..573db34
2025-08-24 00:42:42,913 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:43,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None
2025-08-24 00:42:43,638 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:44,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None
2025-08-24 00:42:44,093 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2025-08-24 00:42:44,385 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-08-24 00:42:44,385 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2025-08-24 00:42:44,389 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2025-08-24 00:42:44,679 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-08-24 00:42:44,680 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2025-08-24 00:42:44,684 [ scc.git] DEBUG ## Unique users: []
2025-08-24 00:42:44,684 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:44,684 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:44,687 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-08-24 00:42:44,692 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:44,695 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-08-24 00:42:44,706 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree.
2025-08-24 00:42:44,706 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-24 00:42:44,707 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-24 00:42:44,709 [ scc.git] DEBUG Calling 'git reset --hard 573db340d5d1429fa17c7e486206948412a7c150'
2025-08-24 00:42:44,713 [ scc.git] DEBUG HEAD is now at 573db34 Bump version: 5.9.1 → 5.9.2.dev0
2025-08-24 00:42:44,716 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:44,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:44,912 [ scc.git] DEBUG Calling 'git merge-base 573db340d5d1429fa17c7e486206948412a7c150 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-08-24 00:42:44,918 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..573db340d5d1429fa17c7e486206948412a7c150'
2025-08-24 00:42:44,922 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#513](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2025-08-24 00:42:44,924 [ scc.config] DEBUG Found github.token
2025-08-24 00:42:44,924 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2025-08-24 00:42:44,924 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-08-24 00:42:44,929 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:44,931 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-08-24 00:42:44,941 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-24 00:42:44,944 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2025-08-24 00:42:44,944 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2025-08-24 00:42:45,164 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:45,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:45,372 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-24 00:42:45,415 [ scc.git] DEBUG Get sha1 of %s
2025-08-24 00:42:45,416 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-24 00:42:45,418 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-24 00:42:45,459 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-24 00:42:45,463 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2dc00cf690> has no local changes
2025-08-24 00:42:45,463 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..573db34
Previously merged:
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#513 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/)'
2025-08-24 00:42:45,469 [ scc.git] DEBUG [detached HEAD 024d3cf] merge master -Dorg -Ssuccess-only
2025-08-24 00:42:45,470 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:45,470 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-24 00:42:45,548 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2025-08-24 00:42:45,624 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:45,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:45,818 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2025-08-24 00:42:45,820 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2025-08-24 00:42:46,065 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:46,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:46,305 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2025-08-24 00:42:46,307 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2025-08-24 00:42:46,552 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:46,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:46,757 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2025-08-24 00:42:46,759 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2025-08-24 00:42:47,004 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:47,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:47,196 [ scc.config] DEBUG Found submodule.omero-figure.url
2025-08-24 00:42:47,442 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:47,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:47,656 [ scc.config] DEBUG Found submodule.omero-figure.branch
2025-08-24 00:42:47,658 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2025-08-24 00:42:47,903 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:48,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:48,111 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2025-08-24 00:42:48,113 [ scc.config] DEBUG Found submodule.omero-gallery.url
2025-08-24 00:42:48,358 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:48,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:48,576 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2025-08-24 00:42:48,578 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2025-08-24 00:42:48,824 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:49,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:49,016 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2025-08-24 00:42:49,018 [ scc.config] DEBUG Found submodule.omero-mapr.url
2025-08-24 00:42:49,263 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:49,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:49,467 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2025-08-24 00:42:49,470 [ scc.config] DEBUG Found submodule.omero-metadata.url
2025-08-24 00:42:49,715 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:49,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:49,961 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2025-08-24 00:42:49,963 [ scc.config] DEBUG Found submodule.omero-parade.url
2025-08-24 00:42:50,209 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:50,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:50,459 [ scc.config] DEBUG Found submodule.omero-parade.branch
2025-08-24 00:42:50,461 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2025-08-24 00:42:50,706 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:50,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:50,911 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2025-08-24 00:42:50,913 [ scc.config] DEBUG Found submodule.omero-rois.url
2025-08-24 00:42:51,158 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:51,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:51,363 [ scc.config] DEBUG Found submodule.omero-signup.url
2025-08-24 00:42:51,609 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:51,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:51,799 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2025-08-24 00:42:52,044 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:52,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:52,279 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2025-08-24 00:42:52,281 [ scc.config] DEBUG Found submodule.omero-upload.url
2025-08-24 00:42:52,526 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:52,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:52,738 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2025-08-24 00:42:52,983 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:53,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:53,197 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2025-08-24 00:42:53,444 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:53,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:53,660 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2025-08-24 00:42:53,662 [ scc.config] DEBUG Found submodule.omero-weberror.url
2025-08-24 00:42:53,907 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:54,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:54,116 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2025-08-24 00:42:54,118 [ scc.config] DEBUG Found submodule.omero-webtest.url
2025-08-24 00:42:54,364 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:54,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:54,598 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2025-08-24 00:42:54,600 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2025-08-24 00:42:54,845 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:55,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:55,034 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2025-08-24 00:42:55,036 [ scc.config] DEBUG Found submodule.scripts.url
2025-08-24 00:42:55,281 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-24 00:42:55,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-24 00:42:55,485 [ scc.config] DEBUG Found submodule.scripts.branch
2025-08-24 00:42:55,485 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-24 00:42:55,576 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2dc2b5de10> has local changes
2025-08-24 00:42:55,576 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
- PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
- PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
Repository: ome/minimal-omero-client
Already up to date.
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Repository: ome/omero-cli-render
Excluded PRs:
- PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 69 dominikl 'Fix help text for impo/export commands'
- PR 71 dominikl 'Escape slash character in image names'
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 180 will-moore 'Register command' (status: failure)
- PR 174 will-moore 'Skip wells' (stage: draft)
- PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure)
- PR 170 will-moore 'Use ome zarr models py' (stage: draft)
- PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
- PR 167 dominikl 'Add extinfo command' (stage: draft)
- PR 166 will-moore 'Downsample scale option' (stage: draft)
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
Updating 11d3587..f7eea7c
Previously merged:
- PR 179 will-moore 'Changelog 0.6.0'
- PR 177 jburel 'Replace fromstring by frombuffer'
- PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
- PR 147 will-moore 'Name option'
- PR 173 will-moore 'Add test_export_plate_polygons()'
- PR 171 will-moore 'Initial addition of integration tests'
- PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
Repository: ome/omero-figure
Excluded PRs:
- PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
- PR 619 will-moore 'OME-Zarr support' (stage: draft)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Updating 9cc36cde..d2c6f5bc
Previously merged:
- PR 638 Rdornier 'Fix arrow opacity'
- PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
- PR 635 dependabot[bot] 'Bump esbuild and vite'
- PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
- PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 600 Rdornier 'Label on rois'
- PR 605 Tom-TBT 'Colorbar feature'
- PR 610 will-moore 'Add docs/contributing.rst'
- PR 612 will-moore 'Script version'
- PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7'
Conflicting PRs (not included):
- PR 616 Rdornier 'Fix labels around border'
- PR 630 will-moore 'Fix color and position for ALL new panel insets'
- PR 637 Rdornier 'Fix scalebar position'
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
- PR 227 will-moore 'Vectortile investigation' (status: failure)
Updating 7a798ce..bb94cf8
Previously merged:
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
Conflicting PRs (not included):
- PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Repository: ome/omero-prometheus-tools
Already up to date.
Repository: ome/omero-rois
Excluded PRs:
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 33 jo-mueller 'Add roi to array functions'
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
- PR 76 will-moore 'Run cli deps'
Repository: ome/omero-upload
Already up to date.
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Already up to date.
Repository: openmicroscopy/omero-webtest
Already up to date.
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..573db34
Previously merged:
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#513 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/513/)'
2025-08-24 00:42:55,589 [ scc.git] DEBUG [detached HEAD 4474226] merge master -Dorg -Ssuccess-only
2025-08-24 00:42:55,589 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2025-08-24 00:42:55,590 [ scc.merge] INFO Repository: ome/omero-plugins
2025-08-24 00:42:55,590 [ scc.merge] INFO Already up to date.
2025-08-24 00:42:55,590 [ scc.merge] INFO
2025-08-24 00:42:55,590 [ scc.merge] INFO Merged PRs:
2025-08-24 00:42:55,590 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-08-24 00:42:55,590 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-08-24 00:42:55,590 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-08-24 00:42:55,590 [ scc.merge] INFO
2025-08-24 00:42:55,590 [ scc.merge] INFO Repository: ome/minimal-omero-client
2025-08-24 00:42:55,590 [ scc.merge] INFO Already up to date.
2025-08-24 00:42:55,590 [ scc.merge] INFO
2025-08-24 00:42:55,590 [ scc.merge] INFO
2025-08-24 00:42:55,590 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2025-08-24 00:42:55,590 [ scc.merge] INFO Excluded PRs:
2025-08-24 00:42:55,590 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2025-08-24 00:42:55,590 [ scc.merge] INFO Already up to date.
2025-08-24 00:42:55,590 [ scc.merge] INFO
2025-08-24 00:42:55,590 [ scc.merge] INFO
2025-08-24 00:42:55,590 [ scc.merge] INFO Repository: ome/omero-cli-render
2025-08-24 00:42:55,590 [ scc.merge] INFO Excluded PRs:
2025-08-24 00:42:55,590 [ scc.merge] INFO - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
2025-08-24 00:42:55,590 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2025-08-24 00:42:55,590 [ scc.merge] INFO Already up to date.
2025-08-24 00:42:55,590 [ scc.merge] INFO
2025-08-24 00:42:55,590 [ scc.merge] INFO Merged PRs:
2025-08-24 00:42:55,590 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate'
2025-08-24 00:42:55,590 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands'
2025-08-24 00:42:55,590 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names'
2025-08-24 00:42:55,590 [ scc.merge] INFO
2025-08-24 00:42:55,591 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2025-08-24 00:42:55,591 [ scc.merge] INFO Excluded PRs:
2025-08-24 00:42:55,591 [ scc.merge] INFO - PR 180 will-moore 'Register command' (status: failure)
2025-08-24 00:42:55,591 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' (stage: draft)
2025-08-24 00:42:55,591 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure)
2025-08-24 00:42:55,591 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft)
2025-08-24 00:42:55,591 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
2025-08-24 00:42:55,591 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft)
2025-08-24 00:42:55,591 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft)
2025-08-24 00:42:55,591 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-08-24 00:42:55,591 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
2025-08-24 00:42:55,591 [ scc.merge] INFO Updating 11d3587..f7eea7c
2025-08-24 00:42:55,591 [ scc.merge] INFO Previously merged:
2025-08-24 00:42:55,591 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0'
2025-08-24 00:42:55,591 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer'
2025-08-24 00:42:55,591 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
2025-08-24 00:42:55,591 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2025-08-24 00:42:55,591 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()'
2025-08-24 00:42:55,591 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests'
2025-08-24 00:42:55,591 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-24 00:42:55,591 [ scc.merge] INFO
2025-08-24 00:42:55,591 [ scc.merge] INFO Merged PRs:
2025-08-24 00:42:55,591 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
2025-08-24 00:42:55,591 [ scc.merge] INFO
2025-08-24 00:42:55,591 [ scc.merge] INFO Repository: ome/omero-figure
2025-08-24 00:42:55,591 [ scc.merge] INFO Excluded PRs:
2025-08-24 00:42:55,591 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
2025-08-24 00:42:55,591 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft)
2025-08-24 00:42:55,591 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment)
2025-08-24 00:42:55,591 [ scc.merge] INFO Updating 9cc36cde..d2c6f5bc
2025-08-24 00:42:55,591 [ scc.merge] INFO Previously merged:
2025-08-24 00:42:55,591 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity'
2025-08-24 00:42:55,591 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
2025-08-24 00:42:55,591 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite'
2025-08-24 00:42:55,591 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
2025-08-24 00:42:55,591 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-24 00:42:55,591 [ scc.merge] INFO
2025-08-24 00:42:55,591 [ scc.merge] INFO Merged PRs:
2025-08-24 00:42:55,592 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois'
2025-08-24 00:42:55,592 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature'
2025-08-24 00:42:55,592 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst'
2025-08-24 00:42:55,592 [ scc.merge] INFO - PR 612 will-moore 'Script version'
2025-08-24 00:42:55,592 [ scc.merge] INFO - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7'
2025-08-24 00:42:55,592 [ scc.merge] INFO
2025-08-24 00:42:55,592 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-24 00:42:55,592 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border'
2025-08-24 00:42:55,592 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets'
2025-08-24 00:42:55,592 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position'
2025-08-24 00:42:55,592 [ scc.merge] INFO
2025-08-24 00:42:55,592 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2025-08-24 00:42:55,592 [ scc.merge] INFO Already up to date.
2025-08-24 00:42:55,592 [ scc.merge] INFO
2025-08-24 00:42:55,592 [ scc.merge] INFO Merged PRs:
2025-08-24 00:42:55,592 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2025-08-24 00:42:55,592 [ scc.merge] INFO
2025-08-24 00:42:55,592 [ scc.merge] INFO Repository: ome/omero-gallery
2025-08-24 00:42:55,592 [ scc.merge] INFO Already up to date.
2025-08-24 00:42:55,592 [ scc.merge] INFO
2025-08-24 00:42:55,592 [ scc.merge] INFO Merged PRs:
2025-08-24 00:42:55,592 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2025-08-24 00:42:55,592 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents'
2025-08-24 00:42:55,592 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2025-08-24 00:42:55,592 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2025-08-24 00:42:55,592 [ scc.merge] INFO
2025-08-24 00:42:55,592 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-24 00:42:55,592 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2025-08-24 00:42:55,592 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2025-08-24 00:42:55,592 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
2025-08-24 00:42:55,592 [ scc.merge] INFO
2025-08-24 00:42:55,592 [ scc.merge] INFO Repository: ome/omero-iviewer
2025-08-24 00:42:55,592 [ scc.merge] INFO Excluded PRs:
2025-08-24 00:42:55,592 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft)
2025-08-24 00:42:55,592 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
2025-08-24 00:42:55,592 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2025-08-24 00:42:55,592 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2025-08-24 00:42:55,592 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure)
2025-08-24 00:42:55,593 [ scc.merge] INFO Updating 7a798ce..bb94cf8
2025-08-24 00:42:55,593 [ scc.merge] INFO Previously merged:
2025-08-24 00:42:55,593 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-24 00:42:55,593 [ scc.merge] INFO
2025-08-24 00:42:55,593 [ scc.merge] INFO Merged PRs:
2025-08-24 00:42:55,593 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2025-08-24 00:42:55,593 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2025-08-24 00:42:55,593 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2025-08-24 00:42:55,593 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha'
2025-08-24 00:42:55,593 [ scc.merge] INFO
2025-08-24 00:42:55,593 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-24 00:42:55,593 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
2025-08-24 00:42:55,593 [ scc.merge] INFO
2025-08-24 00:42:55,593 [ scc.merge] INFO Repository: ome/omero-mapr
2025-08-24 00:42:55,593 [ scc.merge] INFO Excluded PRs:
2025-08-24 00:42:55,593 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2025-08-24 00:42:55,593 [ scc.merge] INFO Already up to date.
2025-08-24 00:42:55,593 [ scc.merge] INFO
2025-08-24 00:42:55,593 [ scc.merge] INFO Merged PRs:
2025-08-24 00:42:55,593 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2025-08-24 00:42:55,593 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-24 00:42:55,593 [ scc.merge] INFO
2025-08-24 00:42:55,593 [ scc.merge] INFO Repository: ome/omero-metadata
2025-08-24 00:42:55,593 [ scc.merge] INFO Updating 3cd120c..55060a2
2025-08-24 00:42:55,593 [ scc.merge] INFO Previously merged:
2025-08-24 00:42:55,593 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-24 00:42:55,593 [ scc.merge] INFO
2025-08-24 00:42:55,593 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-24 00:42:55,593 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-08-24 00:42:55,593 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-08-24 00:42:55,593 [ scc.merge] INFO
2025-08-24 00:42:55,593 [ scc.merge] INFO Repository: ome/omero-parade
2025-08-24 00:42:55,593 [ scc.merge] INFO Excluded PRs:
2025-08-24 00:42:55,593 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
2025-08-24 00:42:55,593 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2025-08-24 00:42:55,593 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2025-08-24 00:42:55,593 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2025-08-24 00:42:55,593 [ scc.merge] INFO Already up to date.
2025-08-24 00:42:55,593 [ scc.merge] INFO
2025-08-24 00:42:55,594 [ scc.merge] INFO Merged PRs:
2025-08-24 00:42:55,594 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-08-24 00:42:55,594 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-08-24 00:42:55,594 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-24 00:42:55,594 [ scc.merge] INFO
2025-08-24 00:42:55,594 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2025-08-24 00:42:55,594 [ scc.merge] INFO Already up to date.
2025-08-24 00:42:55,594 [ scc.merge] INFO
2025-08-24 00:42:55,594 [ scc.merge] INFO
2025-08-24 00:42:55,594 [ scc.merge] INFO Repository: ome/omero-rois
2025-08-24 00:42:55,594 [ scc.merge] INFO Excluded PRs:
2025-08-24 00:42:55,594 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-08-24 00:42:55,594 [ scc.merge] INFO Already up to date.
2025-08-24 00:42:55,594 [ scc.merge] INFO
2025-08-24 00:42:55,594 [ scc.merge] INFO Merged PRs:
2025-08-24 00:42:55,594 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions'
2025-08-24 00:42:55,594 [ scc.merge] INFO
2025-08-24 00:42:55,594 [ scc.merge] INFO Repository: ome/omero-signup
2025-08-24 00:42:55,594 [ scc.merge] INFO Already up to date.
2025-08-24 00:42:55,594 [ scc.merge] INFO
2025-08-24 00:42:55,594 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-24 00:42:55,594 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2025-08-24 00:42:55,594 [ scc.merge] INFO
2025-08-24 00:42:55,594 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2025-08-24 00:42:55,594 [ scc.merge] INFO Excluded PRs:
2025-08-24 00:42:55,594 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles)
2025-08-24 00:42:55,594 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
2025-08-24 00:42:55,594 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
2025-08-24 00:42:55,594 [ scc.merge] INFO Already up to date.
2025-08-24 00:42:55,594 [ scc.merge] INFO
2025-08-24 00:42:55,594 [ scc.merge] INFO Merged PRs:
2025-08-24 00:42:55,594 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2025-08-24 00:42:55,594 [ scc.merge] INFO - PR 76 will-moore 'Run cli deps'
2025-08-24 00:42:55,594 [ scc.merge] INFO
2025-08-24 00:42:55,594 [ scc.merge] INFO Repository: ome/omero-upload
2025-08-24 00:42:55,594 [ scc.merge] INFO Already up to date.
2025-08-24 00:42:55,594 [ scc.merge] INFO
2025-08-24 00:42:55,594 [ scc.merge] INFO
2025-08-24 00:42:55,595 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2025-08-24 00:42:55,595 [ scc.merge] INFO Updating deab817..160d894
2025-08-24 00:42:55,595 [ scc.merge] INFO Previously merged:
2025-08-24 00:42:55,595 [ scc.merge] INFO - PR 20 jburel 'Build'
2025-08-24 00:42:55,595 [ scc.merge] INFO
2025-08-24 00:42:55,595 [ scc.merge] INFO
2025-08-24 00:42:55,595 [ scc.merge] INFO Repository: ome/omero-web-zarr
2025-08-24 00:42:55,595 [ scc.merge] INFO Excluded PRs:
2025-08-24 00:42:55,595 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure)
2025-08-24 00:42:55,595 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2025-08-24 00:42:55,595 [ scc.merge] INFO Already up to date.
2025-08-24 00:42:55,595 [ scc.merge] INFO
2025-08-24 00:42:55,595 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-24 00:42:55,595 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-08-24 00:42:55,595 [ scc.merge] INFO
2025-08-24 00:42:55,595 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2025-08-24 00:42:55,595 [ scc.merge] INFO Already up to date.
2025-08-24 00:42:55,595 [ scc.merge] INFO
2025-08-24 00:42:55,595 [ scc.merge] INFO
2025-08-24 00:42:55,595 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2025-08-24 00:42:55,595 [ scc.merge] INFO Already up to date.
2025-08-24 00:42:55,595 [ scc.merge] INFO
2025-08-24 00:42:55,595 [ scc.merge] INFO
2025-08-24 00:42:55,595 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2025-08-24 00:42:55,595 [ scc.merge] INFO Already up to date.
2025-08-24 00:42:55,595 [ scc.merge] INFO
2025-08-24 00:42:55,595 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-24 00:42:55,595 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2025-08-24 00:42:55,595 [ scc.merge] INFO
2025-08-24 00:42:55,595 [ scc.merge] INFO Repository: ome/scripts
2025-08-24 00:42:55,595 [ scc.merge] INFO Excluded PRs:
2025-08-24 00:42:55,595 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2025-08-24 00:42:55,595 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2025-08-24 00:42:55,595 [ scc.merge] INFO Updating 4b4c755..573db34
2025-08-24 00:42:55,595 [ scc.merge] INFO Previously merged:
2025-08-24 00:42:55,595 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes'
2025-08-24 00:42:55,595 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests'
2025-08-24 00:42:55,595 [ scc.merge] INFO
2025-08-24 00:42:55,595 [ scc.merge] INFO Merged PRs:
2025-08-24 00:42:55,596 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-08-24 00:42:55,596 [ scc.merge] INFO
2025-08-24 00:42:55,596 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-24 00:42:55,596 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-08-24 00:42:55,596 [ scc.merge] INFO
2025-08-24 00:42:55,596 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-08-24 00:42:55,596 [ scc.git] DEBUG Calling 'git remote'
2025-08-24 00:42:55,598 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-08-24 00:42:55,598 [ scc.git] DEBUG Calling 'git remote'
2025-08-24 00:42:55,600 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:55,600 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-08-24 00:42:55,600 [ scc.git] DEBUG Calling 'git remote'
2025-08-24 00:42:55,602 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:55,603 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-08-24 00:42:55,603 [ scc.git] DEBUG Calling 'git remote'
2025-08-24 00:42:55,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:55,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-08-24 00:42:55,605 [ scc.git] DEBUG Calling 'git remote'
2025-08-24 00:42:55,607 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:55,607 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-08-24 00:42:55,607 [ scc.git] DEBUG Calling 'git remote'
2025-08-24 00:42:55,609 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:55,609 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-08-24 00:42:55,609 [ scc.git] DEBUG Calling 'git remote'
2025-08-24 00:42:55,611 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:55,611 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-08-24 00:42:55,612 [ scc.git] DEBUG Calling 'git remote'
2025-08-24 00:42:55,614 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:55,614 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-08-24 00:42:55,614 [ scc.git] DEBUG Calling 'git remote'
2025-08-24 00:42:55,616 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:55,616 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-08-24 00:42:55,616 [ scc.git] DEBUG Calling 'git remote'
2025-08-24 00:42:55,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:55,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-08-24 00:42:55,618 [ scc.git] DEBUG Calling 'git remote'
2025-08-24 00:42:55,620 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:55,620 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-08-24 00:42:55,620 [ scc.git] DEBUG Calling 'git remote'
2025-08-24 00:42:55,623 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:55,623 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-08-24 00:42:55,623 [ scc.git] DEBUG Calling 'git remote'
2025-08-24 00:42:55,625 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:55,625 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-08-24 00:42:55,625 [ scc.git] DEBUG Calling 'git remote'
2025-08-24 00:42:55,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:55,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-08-24 00:42:55,627 [ scc.git] DEBUG Calling 'git remote'
2025-08-24 00:42:55,629 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:55,629 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-08-24 00:42:55,629 [ scc.git] DEBUG Calling 'git remote'
2025-08-24 00:42:55,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:55,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-08-24 00:42:55,632 [ scc.git] DEBUG Calling 'git remote'
2025-08-24 00:42:55,634 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:55,634 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-08-24 00:42:55,634 [ scc.git] DEBUG Calling 'git remote'
2025-08-24 00:42:55,636 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:55,636 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-08-24 00:42:55,636 [ scc.git] DEBUG Calling 'git remote'
2025-08-24 00:42:55,638 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:55,638 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-08-24 00:42:55,638 [ scc.git] DEBUG Calling 'git remote'
2025-08-24 00:42:55,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:55,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-08-24 00:42:55,641 [ scc.git] DEBUG Calling 'git remote'
2025-08-24 00:42:55,643 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:55,643 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-08-24 00:42:55,643 [ scc.git] DEBUG Calling 'git remote'
2025-08-24 00:42:55,645 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-24 00:42:55,645 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-08-24 00:42:55,645 [ scc.git] DEBUG Calling 'git remote'
2025-08-24 00:42:55,647 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.10.0 to 5.10.4-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD 9e46a81] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
HEAD detached from 4777ef8
nothing to commit, working tree clean
Entering 'omero-cli-render'
HEAD detached from ce6e13c
nothing to commit, working tree clean
Entering 'omero-cli-zarr'
HEAD detached from 11d3587
Untracked files:
(use "git add <file>..." to include in what will be committed)
.eggs/
nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
HEAD detached from 9cc36cde
nothing to commit, working tree clean
Entering 'omero-fpbioimage'
HEAD detached from 3b6c05a
nothing to commit, working tree clean
Entering 'omero-gallery'
HEAD detached from 2a621da
nothing to commit, working tree clean
Entering 'omero-iviewer'
HEAD detached from 7a798ce
nothing to commit, working tree clean
Entering 'omero-mapr'
HEAD detached from 0a557da
nothing to commit, working tree clean
Entering 'omero-metadata'
HEAD detached from 3cd120c
nothing to commit, working tree clean
Entering 'omero-parade'
HEAD detached from fb5ae86
nothing to commit, working tree clean
Entering 'omero-prometheus-tools'
HEAD detached from eb47378
nothing to commit, working tree clean
Entering 'omero-rois'
HEAD detached from bdfeb5e
nothing to commit, working tree clean
Entering 'omero-signup'
HEAD detached from be76813
nothing to commit, working tree clean
Entering 'omero-test-infra'
HEAD detached from cda3ec6
nothing to commit, working tree clean
Entering 'omero-upload'
HEAD detached from 100f6ae
nothing to commit, working tree clean
Entering 'omero-virtual-microscope'
HEAD detached from deab817
nothing to commit, working tree clean
Entering 'omero-web-zarr'
HEAD detached from 8f3c313
nothing to commit, working tree clean
Entering 'omero-weberror'
HEAD detached from 70b01ed
nothing to commit, working tree clean
Entering 'omero-webtest'
HEAD detached from 5bfef29
nothing to commit, working tree clean
Entering 'rOMERO-gateway'
HEAD detached from 7b5d64d
nothing to commit, working tree clean
Entering 'scripts'
HEAD detached from 4b4c755
nothing to commit, working tree clean
[detached HEAD e970f43] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-08-24 00:43:45,446 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-08-24 00:43:55,865 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-08-24 00:43:58,521 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-08-24 00:44:03,744 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-08-24 00:44:44,099 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS
![[Jenkins]](/jenkins/static/9bac06d9/images/svgs/logo.svg){kind=logo}
