![[Jenkins]](/jenkins/static/9bac06d9/images/svgs/logo.svg){kind=logo}
Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 532 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.2 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.7.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.15-py3-none-any.whl.metadata (25 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-45.0.6-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.14 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting pycparser (from cffi>=1.14->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.8.3-py3-none-any.whl.metadata (2.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.7.0-py3-none-any.whl (416 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-45.0.6-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (150 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.8.3-py3-none-any.whl (161 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Using cached ruamel.yaml-0.18.15-py3-none-any.whl (119 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.7.0 PyYAML-6.0.2 certifi-2025.8.3 cffi-1.17.1 charset_normalizer-3.4.3 cryptography-45.0.6 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.5 ruamel.yaml-0.18.15 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-08-28 14:53:31,405 [ scc.config] DEBUG Found github.token 2025-08-28 14:53:31,407 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:31,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:53:31,888 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:32,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:53:32,358 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:32,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-08-28 14:53:32,586 [ scc.gh] DEBUG 4990 remaining from 5000 (Reset at 15:08 2025-08-28 14:53:32,588 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 14:53:32,590 [ scc.git] DEBUG Check current status 2025-08-28 14:53:32,590 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 14:53:32,593 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-08-28 14:53:32,593 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 14:53:32,644 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-08-28 14:53:32,647 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-08-28 14:53:32,651 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-08-28 14:53:32,655 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-08-28 14:53:32,660 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-08-28 14:53:32,663 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-08-28 14:53:32,666 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-08-28 14:53:32,670 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-08-28 14:53:32,674 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-08-28 14:53:32,677 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-08-28 14:53:32,680 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-08-28 14:53:32,684 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-08-28 14:53:32,688 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-08-28 14:53:32,691 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-08-28 14:53:32,694 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-08-28 14:53:32,698 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-08-28 14:53:32,701 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-08-28 14:53:32,704 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-08-28 14:53:32,707 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-08-28 14:53:32,710 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-08-28 14:53:32,713 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-08-28 14:53:32,717 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-08-28 14:53:32,720 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 14:53:32,839 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:33,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-08-28 14:53:33,408 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:33,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 14:53:33,955 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:34,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 14:53:34,450 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:34,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 14:53:34,912 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:35,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 14:53:35,134 [ scc.git] DEBUG Resetting... 2025-08-28 14:53:35,134 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-08-28 14:53:35,143 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-08-28 14:53:35,143 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-08-28 14:53:35,255 [ scc.git] DEBUG Check current status 2025-08-28 14:53:35,255 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 14:53:35,257 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-08-28 14:53:35,258 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 14:53:35,307 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-08-28 14:53:35,310 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-08-28 14:53:35,314 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-08-28 14:53:35,318 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-08-28 14:53:35,322 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-08-28 14:53:35,325 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-08-28 14:53:35,329 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-08-28 14:53:35,333 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-08-28 14:53:35,336 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-08-28 14:53:35,340 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-08-28 14:53:35,344 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-08-28 14:53:35,347 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-08-28 14:53:35,351 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-08-28 14:53:35,355 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-08-28 14:53:35,359 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-08-28 14:53:35,362 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-08-28 14:53:35,365 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-08-28 14:53:35,368 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-08-28 14:53:35,371 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-08-28 14:53:35,375 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-08-28 14:53:35,378 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-08-28 14:53:35,382 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-08-28 14:53:35,383 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-08-28 14:53:35,383 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-08-28 14:53:35,383 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-08-28 14:53:35,383 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-08-28 14:53:35,383 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-08-28 14:53:35,383 [ scc.repo] DEBUG ## PRs found: 2025-08-28 14:53:35,386 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:35,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-08-28 14:53:35,945 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:36,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2025-08-28 14:53:36,272 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-28 14:53:36,272 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-08-28 14:53:36,524 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:36,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2025-08-28 14:53:36,806 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-28 14:53:36,806 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-08-28 14:53:37,058 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:37,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-08-28 14:53:37,344 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-28 14:53:37,344 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-08-28 14:53:37,344 [ scc.repo] DEBUG ## Branches found: 2025-08-28 14:53:37,345 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:53:37,345 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:53:37,347 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 14:53:37,350 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 14:53:37,350 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 14:53:37,353 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 14:53:37,356 [ scc.git] DEBUG Already up to date. 2025-08-28 14:53:37,356 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-08-28 14:53:37,662 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-08-28 14:53:37,662 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-08-28 14:53:37,670 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2025-08-28 14:53:37,951 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-08-28 14:53:37,951 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2025-08-28 14:53:37,959 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2025-08-28 14:53:38,267 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-08-28 14:53:38,267 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2025-08-28 14:53:38,274 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 14:53:38,274 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:53:38,274 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:53:38,277 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-08-28 14:53:38,280 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:53:38,282 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-08-28 14:53:38,301 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:53:38,304 [ scc.git] DEBUG scripts | 2 +- 2025-08-28 14:53:38,304 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-28 14:53:38,306 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:38,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:53:38,506 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-08-28 14:53:38,510 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:53:38,512 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-08-28 14:53:38,531 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:53:38,533 [ scc.git] DEBUG omero-figure | 2 +- 2025-08-28 14:53:38,534 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-28 14:53:38,759 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:38,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:53:38,968 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-08-28 14:53:38,972 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:53:38,974 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-08-28 14:53:38,993 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:53:38,996 [ scc.git] DEBUG omero-iviewer | 2 +- 2025-08-28 14:53:38,996 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-28 14:53:39,220 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:39,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:53:39,461 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 14:53:39,528 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2025-08-28 14:53:39,559 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2025-08-28 14:53:39,575 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-08-28 14:53:39,577 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:53:39,577 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:53:39,579 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 14:53:39,671 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3d04cf06d0> has no local changes 2025-08-28 14:53:39,671 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/)' 2025-08-28 14:53:39,756 [ scc.git] DEBUG [detached HEAD 50493a3] merge master -Dorg -Snone 2025-08-28 14:53:39,757 [ scc.merge] INFO Repository: ome/omero-plugins 2025-08-28 14:53:39,757 [ scc.merge] INFO Already up to date. 2025-08-28 14:53:39,757 [ scc.merge] INFO 2025-08-28 14:53:39,757 [ scc.merge] INFO Merged PRs: 2025-08-28 14:53:39,757 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-08-28 14:53:39,757 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-08-28 14:53:39,757 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-08-28 14:53:39,757 [ scc.merge] INFO 2025-08-28 14:53:39,757 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-08-28 14:53:39,757 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-zarr': checked out 'f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb' Submodule path 'omero-figure': checked out 'd2c6f5bc061df1e02422728732b07ae7a929ccb2' Submodule path 'omero-iviewer': checked out 'bb94cf8da960e3283090038b04432f301560f5e4' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'scripts': checked out '573db340d5d1429fa17c7e486206948412a7c150' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2025-08-28 14:53:47,136 [ scc.config] DEBUG Found github.token 2025-08-28 14:53:47,137 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:47,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:53:47,593 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:47,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:53:48,080 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:48,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-08-28 14:53:48,260 [ scc.gh] DEBUG 4976 remaining from 5000 (Reset at 15:08 2025-08-28 14:53:48,261 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 14:53:48,263 [ scc.git] DEBUG Check current status 2025-08-28 14:53:48,263 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 14:53:48,266 [ scc.git] DEBUG 50493a3 merge master -Dorg -Snone 2025-08-28 14:53:48,266 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 14:53:48,317 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-08-28 14:53:48,321 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-08-28 14:53:48,325 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-08-28 14:53:48,329 [ scc.git] DEBUG +f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb omero-cli-zarr (v0.6.1-1-gf7eea7c) 2025-08-28 14:53:48,334 [ scc.git] DEBUG +d2c6f5bc061df1e02422728732b07ae7a929ccb2 omero-figure (v7.2.1-14-gd2c6f5bc) 2025-08-28 14:53:48,337 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-08-28 14:53:48,341 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-08-28 14:53:48,346 [ scc.git] DEBUG +bb94cf8da960e3283090038b04432f301560f5e4 omero-iviewer (v0.16.0-16-gbb94cf8) 2025-08-28 14:53:48,349 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-08-28 14:53:48,353 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2025-08-28 14:53:48,356 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-08-28 14:53:48,359 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-08-28 14:53:48,364 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-08-28 14:53:48,367 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-08-28 14:53:48,371 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-08-28 14:53:48,374 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-08-28 14:53:48,377 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2025-08-28 14:53:48,380 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-08-28 14:53:48,384 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-08-28 14:53:48,387 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-08-28 14:53:48,390 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-08-28 14:53:48,394 [ scc.git] DEBUG +573db340d5d1429fa17c7e486206948412a7c150 scripts (v5.9.1-1-g573db34) 2025-08-28 14:53:48,397 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 14:53:48,398 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-08-28 14:53:48,399 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2025-08-28 14:53:48,512 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:48,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-08-28 14:53:49,144 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:49,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 14:53:49,665 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:49,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 14:53:50,165 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:50,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 14:53:50,669 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:50,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 14:53:50,883 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:53:50,965 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-08-28 14:53:50,966 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 14:53:50,968 [ scc.git] DEBUG Check current status 2025-08-28 14:53:50,968 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 14:53:50,971 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2025-08-28 14:53:50,971 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 14:53:51,012 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 14:53:51,135 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:51,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2025-08-28 14:53:51,690 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:51,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 14:53:52,213 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:52,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 14:53:52,775 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:53,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 14:53:53,286 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:53,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 14:53:53,513 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:53:53,556 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:53:53,557 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-08-28 14:53:53,557 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 14:53:53,559 [ scc.git] DEBUG Check current status 2025-08-28 14:53:53,559 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 14:53:53,561 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2025-08-28 14:53:53,562 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 14:53:53,603 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 14:53:53,765 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:54,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2025-08-28 14:53:54,376 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:54,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 14:53:54,960 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:55,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 14:53:55,442 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:55,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 14:53:55,913 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:56,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 14:53:56,172 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:53:56,214 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:53:56,214 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-08-28 14:53:56,214 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 14:53:56,217 [ scc.git] DEBUG Check current status 2025-08-28 14:53:56,217 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 14:53:56,219 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export 2025-08-28 14:53:56,219 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 14:53:56,261 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 14:53:56,424 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:56,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2025-08-28 14:53:56,987 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:57,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 14:53:57,699 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:57,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 14:53:58,218 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:58,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 14:53:58,692 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:58,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 14:53:58,995 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:53:59,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:53:59,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-08-28 14:53:59,037 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 14:53:59,039 [ scc.git] DEBUG Check current status 2025-08-28 14:53:59,039 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 14:53:59,042 [ scc.git] DEBUG f7eea7c Bump version: 0.6.1 → 0.6.2.dev0 2025-08-28 14:53:59,042 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 14:53:59,084 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 14:53:59,247 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:53:59,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2025-08-28 14:53:59,912 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:00,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 14:54:00,466 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:00,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 14:54:00,947 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:01,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 14:54:01,432 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:01,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 14:54:01,734 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:54:01,776 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:54:01,777 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-08-28 14:54:01,777 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 14:54:01,779 [ scc.git] DEBUG Check current status 2025-08-28 14:54:01,779 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 14:54:01,782 [ scc.git] DEBUG d2c6f5bc Merge pull request #638 from Rdornier/fix-arrow-opacity 2025-08-28 14:54:01,783 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 14:54:01,824 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 14:54:01,986 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:02,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2025-08-28 14:54:02,577 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:02,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 14:54:03,110 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:03,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 14:54:03,584 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:03,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 14:54:04,066 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:04,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 14:54:04,291 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:54:04,331 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:54:04,331 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-08-28 14:54:04,331 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 14:54:04,334 [ scc.git] DEBUG Check current status 2025-08-28 14:54:04,334 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 14:54:04,336 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2025-08-28 14:54:04,337 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 14:54:04,377 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 14:54:04,542 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:04,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2025-08-28 14:54:05,158 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:05,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 14:54:05,697 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:06,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 14:54:06,263 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:06,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 14:54:06,814 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:07,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 14:54:07,073 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:54:07,113 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:54:07,113 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-08-28 14:54:07,113 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 14:54:07,116 [ scc.git] DEBUG Check current status 2025-08-28 14:54:07,116 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 14:54:07,118 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2025-08-28 14:54:07,118 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 14:54:07,159 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 14:54:07,325 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:07,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2025-08-28 14:54:07,911 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:08,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 14:54:08,456 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:08,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 14:54:08,957 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:09,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 14:54:09,506 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:09,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 14:54:09,723 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:54:09,764 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:54:09,765 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-08-28 14:54:09,765 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 14:54:09,767 [ scc.git] DEBUG Check current status 2025-08-28 14:54:09,767 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 14:54:09,770 [ scc.git] DEBUG bb94cf8 Merge pull request #506 from will-moore/pypi_release_action 2025-08-28 14:54:09,770 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 14:54:09,812 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 14:54:09,975 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:10,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2025-08-28 14:54:10,628 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:10,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 14:54:11,249 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:11,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 14:54:11,741 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:12,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 14:54:12,281 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:12,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 14:54:12,497 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:54:12,538 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:54:12,539 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-08-28 14:54:12,539 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 14:54:12,541 [ scc.git] DEBUG Check current status 2025-08-28 14:54:12,541 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 14:54:12,543 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2025-08-28 14:54:12,544 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 14:54:12,586 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 14:54:12,748 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:13,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2025-08-28 14:54:13,343 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:13,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 14:54:13,974 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:14,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 14:54:14,448 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:14,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 14:54:14,913 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:15,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 14:54:15,223 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:54:15,264 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:54:15,264 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-08-28 14:54:15,264 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 14:54:15,267 [ scc.git] DEBUG Check current status 2025-08-28 14:54:15,267 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 14:54:15,269 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-08-28 14:54:15,269 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 14:54:15,311 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 14:54:15,474 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:15,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2025-08-28 14:54:16,098 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:16,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 14:54:16,664 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:16,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 14:54:17,151 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:17,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 14:54:17,641 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:17,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 14:54:17,910 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:54:17,952 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:54:17,953 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-08-28 14:54:17,953 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 14:54:17,955 [ scc.git] DEBUG Check current status 2025-08-28 14:54:17,955 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 14:54:17,958 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2025-08-28 14:54:17,958 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 14:54:18,000 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 14:54:18,162 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:18,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2025-08-28 14:54:18,818 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:19,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 14:54:19,420 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:19,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 14:54:19,951 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:20,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 14:54:20,475 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:20,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 14:54:20,707 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:54:20,748 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:54:20,749 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-08-28 14:54:20,749 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 14:54:20,751 [ scc.git] DEBUG Check current status 2025-08-28 14:54:20,751 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 14:54:20,754 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2025-08-28 14:54:20,754 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 14:54:20,795 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 14:54:20,959 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:21,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2025-08-28 14:54:21,553 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:21,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 14:54:22,219 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:22,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 14:54:22,687 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:22,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 14:54:23,187 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:23,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 14:54:23,404 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:54:23,444 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:54:23,445 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-08-28 14:54:23,445 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 14:54:23,447 [ scc.git] DEBUG Check current status 2025-08-28 14:54:23,447 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 14:54:23,449 [ scc.git] DEBUG bdfeb5e bump sphinx version 2025-08-28 14:54:23,450 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 14:54:23,490 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 14:54:23,656 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:23,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2025-08-28 14:54:24,219 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:24,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 14:54:24,760 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:25,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 14:54:25,272 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:25,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 14:54:25,766 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:25,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 14:54:25,998 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:54:26,038 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:54:26,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-08-28 14:54:26,039 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 14:54:26,041 [ scc.git] DEBUG Check current status 2025-08-28 14:54:26,041 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 14:54:26,044 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2025-08-28 14:54:26,044 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 14:54:26,087 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 14:54:26,251 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:26,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2025-08-28 14:54:26,809 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:27,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 14:54:27,349 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:27,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 14:54:27,861 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:28,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 14:54:28,392 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:28,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 14:54:28,775 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:54:28,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:54:28,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-08-28 14:54:28,817 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 14:54:28,820 [ scc.git] DEBUG Check current status 2025-08-28 14:54:28,820 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 14:54:28,822 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2025-08-28 14:54:28,823 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 14:54:28,865 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 14:54:29,027 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:29,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-08-28 14:54:29,252 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-08-28 14:54:29,253 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:29,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2025-08-28 14:54:29,840 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:30,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 14:54:30,408 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:30,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 14:54:30,922 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:31,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 14:54:31,455 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:31,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 14:54:31,689 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:54:31,729 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:54:31,730 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-08-28 14:54:31,730 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 14:54:31,733 [ scc.git] DEBUG Check current status 2025-08-28 14:54:31,733 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 14:54:31,736 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2025-08-28 14:54:31,736 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 14:54:31,778 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 14:54:31,941 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:32,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2025-08-28 14:54:32,512 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:32,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 14:54:33,067 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:33,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 14:54:33,539 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:33,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 14:54:34,051 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:34,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 14:54:34,244 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:54:34,285 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:54:34,285 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-08-28 14:54:34,285 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 14:54:34,288 [ scc.git] DEBUG Check current status 2025-08-28 14:54:34,288 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 14:54:34,290 [ scc.git] DEBUG 160d894 Fix display of code 2025-08-28 14:54:34,291 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 14:54:34,333 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 14:54:34,496 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:34,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2025-08-28 14:54:35,087 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:35,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 14:54:35,635 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:35,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 14:54:36,116 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:36,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 14:54:36,671 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:36,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 14:54:36,899 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:54:36,941 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:54:36,941 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-08-28 14:54:36,941 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 14:54:36,943 [ scc.git] DEBUG Check current status 2025-08-28 14:54:36,944 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 14:54:36,946 [ scc.git] DEBUG 8f3c313 Merge pull request #17 from jburel/build 2025-08-28 14:54:36,946 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 14:54:36,989 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 14:54:36,989 [ scc.git] DEBUG Repository configuration: base-branch: main 2025-08-28 14:54:37,151 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:37,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2025-08-28 14:54:37,744 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:38,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 14:54:38,337 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:38,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 14:54:38,820 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:39,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 14:54:39,304 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:39,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 14:54:39,559 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:54:39,603 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:54:39,604 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-08-28 14:54:39,604 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 14:54:39,606 [ scc.git] DEBUG Check current status 2025-08-28 14:54:39,606 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 14:54:39,608 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2025-08-28 14:54:39,609 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 14:54:39,649 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 14:54:39,811 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:40,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-08-28 14:54:40,070 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-08-28 14:54:40,070 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:40,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2025-08-28 14:54:40,690 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:41,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 14:54:41,321 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:41,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 14:54:41,866 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:42,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 14:54:42,367 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:42,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 14:54:42,612 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:54:42,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:54:42,654 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-08-28 14:54:42,654 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 14:54:42,656 [ scc.git] DEBUG Check current status 2025-08-28 14:54:42,656 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 14:54:42,659 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2025-08-28 14:54:42,659 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 14:54:42,701 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 14:54:42,864 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:43,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-08-28 14:54:43,103 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-08-28 14:54:43,103 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:43,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2025-08-28 14:54:43,713 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:43,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 14:54:44,246 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:44,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 14:54:44,747 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:44,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 14:54:45,197 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:45,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 14:54:45,453 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:54:45,495 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:54:45,496 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-08-28 14:54:45,496 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 14:54:45,498 [ scc.git] DEBUG Check current status 2025-08-28 14:54:45,498 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 14:54:45,501 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-08-28 14:54:45,501 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 14:54:45,544 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 14:54:45,706 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:46,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2025-08-28 14:54:46,303 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:46,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 14:54:46,898 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:47,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 14:54:47,400 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:47,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 14:54:47,901 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:48,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 14:54:48,128 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:54:48,168 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:54:48,169 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-08-28 14:54:48,169 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 14:54:48,171 [ scc.git] DEBUG Check current status 2025-08-28 14:54:48,171 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 14:54:48,174 [ scc.git] DEBUG 573db34 Bump version: 5.9.1 → 5.9.2.dev0 2025-08-28 14:54:48,174 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 14:54:48,215 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 14:54:48,215 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-08-28 14:54:48,380 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:48,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-08-28 14:54:48,637 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-08-28 14:54:48,638 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:49,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2025-08-28 14:54:49,284 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:50,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 14:54:50,504 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:50,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 14:54:50,975 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:51,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 14:54:51,467 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:52,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 14:54:52,042 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:54:52,082 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:54:52,083 [ scc.git] DEBUG Resetting... 2025-08-28 14:54:52,083 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-08-28 14:54:52,091 [ scc.git] DEBUG HEAD is now at 50493a3 merge master -Dorg -Snone 2025-08-28 14:54:52,091 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-08-28 14:54:52,154 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2025-08-28 14:54:52,176 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2025-08-28 14:54:52,200 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2025-08-28 14:54:52,217 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2025-08-28 14:54:52,248 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2025-08-28 14:54:52,278 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-08-28 14:54:52,282 [ scc.git] DEBUG Check current status 2025-08-28 14:54:52,282 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 14:54:52,284 [ scc.git] DEBUG 50493a3 merge master -Dorg -Snone 2025-08-28 14:54:52,284 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 14:54:52,332 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-08-28 14:54:52,336 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-08-28 14:54:52,339 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-08-28 14:54:52,343 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-08-28 14:54:52,348 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2025-08-28 14:54:52,351 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-08-28 14:54:52,354 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-08-28 14:54:52,358 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2025-08-28 14:54:52,362 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-08-28 14:54:52,365 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-08-28 14:54:52,369 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-08-28 14:54:52,372 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-08-28 14:54:52,376 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-08-28 14:54:52,379 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-08-28 14:54:52,382 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-08-28 14:54:52,386 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-08-28 14:54:52,389 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-08-28 14:54:52,392 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-08-28 14:54:52,395 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-08-28 14:54:52,398 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-08-28 14:54:52,401 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-08-28 14:54:52,405 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2025-08-28 14:54:52,406 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-08-28 14:54:52,406 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-08-28 14:54:52,406 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-08-28 14:54:52,406 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-08-28 14:54:52,406 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-08-28 14:54:52,406 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-08-28 14:54:52,406 [ scc.repo] DEBUG ## PRs found: 2025-08-28 14:54:52,409 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:52,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-08-28 14:54:52,975 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:53,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2025-08-28 14:54:53,337 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-28 14:54:53,589 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:54,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2025-08-28 14:54:54,334 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:54,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:54:54,863 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:55,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2025-08-28 14:54:55,433 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:55,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:54:55,665 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-08-28 14:54:55,916 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:56,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2025-08-28 14:54:56,191 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-28 14:54:56,443 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:56,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2025-08-28 14:54:57,041 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:57,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:54:57,566 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:57,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2025-08-28 14:54:58,194 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:58,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:54:58,429 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-08-28 14:54:58,681 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:59,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-08-28 14:54:59,007 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-28 14:54:59,260 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:54:59,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-08-28 14:54:59,863 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:00,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:55:00,402 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:00,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-08-28 14:55:00,960 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:01,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:55:01,257 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-08-28 14:55:01,258 [ scc.repo] DEBUG ## Branches found: 2025-08-28 14:55:01,258 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:55:01,258 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:55:01,260 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 14:55:01,263 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 14:55:01,263 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 14:55:01,266 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 14:55:01,269 [ scc.git] DEBUG Already up to date. 2025-08-28 14:55:01,269 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-08-28 14:55:01,575 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-08-28 14:55:01,575 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-08-28 14:55:01,582 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2025-08-28 14:55:01,867 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-08-28 14:55:01,868 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2025-08-28 14:55:01,875 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2025-08-28 14:55:02,420 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-08-28 14:55:02,421 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2025-08-28 14:55:02,428 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 14:55:02,428 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:55:02,428 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:55:02,430 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-08-28 14:55:02,433 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:55:02,435 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-08-28 14:55:02,438 [ scc.git] DEBUG Already up to date. 2025-08-28 14:55:02,440 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:02,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:55:02,657 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-08-28 14:55:02,660 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:55:02,662 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-08-28 14:55:02,665 [ scc.git] DEBUG Already up to date. 2025-08-28 14:55:02,908 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:03,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:55:03,122 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-08-28 14:55:03,125 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:55:03,127 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-08-28 14:55:03,130 [ scc.git] DEBUG Already up to date. 2025-08-28 14:55:03,374 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:03,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:55:03,587 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 14:55:03,642 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:55:03,642 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:55:03,645 [ scc.repo] DEBUG ## PRs found: 2025-08-28 14:55:03,839 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:04,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2025-08-28 14:55:04,085 [ scc.repo] DEBUG ## Branches found: 2025-08-28 14:55:04,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-08-28 14:55:04,085 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:55:04,085 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:55:04,088 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 14:55:04,091 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 14:55:04,091 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 14:55:04,094 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 14:55:04,097 [ scc.git] DEBUG Already up to date. 2025-08-28 14:55:04,097 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 14:55:04,097 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:55:04,097 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:55:04,100 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 14:55:04,140 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:55:04,140 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:55:04,142 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:55:04,181 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 14:55:04,185 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe59e325450> has no local changes 2025-08-28 14:55:04,185 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/)' 2025-08-28 14:55:04,191 [ scc.git] DEBUG [detached HEAD 61697e4] merge master -Dorg -Ssuccess-only 2025-08-28 14:55:04,191 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:55:04,191 [ scc.repo] DEBUG ## PRs found: 2025-08-28 14:55:04,338 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:04,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2025-08-28 14:55:04,916 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:05,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2025-08-28 14:55:05,435 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:05,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2025-08-28 14:55:05,726 [ scc.repo] DEBUG ## Branches found: 2025-08-28 14:55:05,727 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-08-28 14:55:05,727 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:55:05,727 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:55:05,729 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 14:55:05,732 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 14:55:05,732 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 14:55:05,735 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 14:55:05,738 [ scc.git] DEBUG Already up to date. 2025-08-28 14:55:05,738 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 14:55:05,738 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:55:05,738 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:55:05,741 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 14:55:05,781 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:55:05,781 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:55:05,784 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:55:05,823 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 14:55:05,826 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe59e5fad50> has no local changes 2025-08-28 14:55:05,826 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Generated by OMERO-plugins-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/)' 2025-08-28 14:55:05,832 [ scc.git] DEBUG [detached HEAD 0b10e3e] merge master -Dorg -Ssuccess-only 2025-08-28 14:55:05,833 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:55:05,833 [ scc.repo] DEBUG ## PRs found: 2025-08-28 14:55:05,978 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:06,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2025-08-28 14:55:06,613 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:06,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/71 HTTP/1.1" 200 None 2025-08-28 14:55:07,149 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:07,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None 2025-08-28 14:55:07,738 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:08,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:55:08,266 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:08,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None 2025-08-28 14:55:08,880 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:09,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/530b6b0ab1346ef837188b2eb3b1a5f679b490b6?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:55:09,113 [ scc.repo] DEBUG - PR 71 dominikl 'Escape slash character in image names' 2025-08-28 14:55:09,365 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:09,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/70 HTTP/1.1" 200 None 2025-08-28 14:55:09,921 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:10,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/69 HTTP/1.1" 200 None 2025-08-28 14:55:10,523 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:10,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None 2025-08-28 14:55:11,084 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:11,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:55:11,615 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:11,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:55:12,232 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:12,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None 2025-08-28 14:55:12,766 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:12,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/eb65a6621a6b07771ed3410c81ddaa1731004c22?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:55:13,000 [ scc.repo] DEBUG - PR 69 dominikl 'Fix help text for impo/export commands' 2025-08-28 14:55:13,251 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:13,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2025-08-28 14:55:13,828 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:14,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2025-08-28 14:55:14,401 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:14,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-08-28 14:55:15,001 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:15,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:55:15,564 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:15,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:55:16,119 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:16,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-08-28 14:55:16,690 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:16,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:55:16,921 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2025-08-28 14:55:17,173 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:17,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2025-08-28 14:55:17,703 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:17,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2025-08-28 14:55:17,959 [ scc.repo] DEBUG ## Branches found: 2025-08-28 14:55:17,959 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-08-28 14:55:17,959 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:55:17,959 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:55:17,962 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 14:55:17,964 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 14:55:17,964 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 14:55:17,967 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 14:55:17,971 [ scc.git] DEBUG Already up to date. 2025-08-28 14:55:17,971 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2025-08-28 14:55:18,264 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-08-28 14:55:18,265 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2025-08-28 14:55:18,269 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-08-28 14:55:18,554 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-08-28 14:55:18,554 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-08-28 14:55:18,559 [ scc.git] DEBUG Calling 'git fetch origin pull/71/head' 2025-08-28 14:55:18,842 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-08-28 14:55:18,842 [ scc.git] DEBUG * branch refs/pull/71/head -> FETCH_HEAD 2025-08-28 14:55:18,846 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 14:55:18,846 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:55:18,846 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:55:18,849 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a' 2025-08-28 14:55:18,853 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:55:18,855 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a' 2025-08-28 14:55:18,864 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:55:18,867 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++--------------------- 2025-08-28 14:55:18,867 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-) 2025-08-28 14:55:18,870 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:19,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:55:19,098 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eb65a6621a6b07771ed3410c81ddaa1731004c22' 2025-08-28 14:55:19,102 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:55:19,104 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Fix help text for impo/export commands) eb65a6621a6b07771ed3410c81ddaa1731004c22' 2025-08-28 14:55:19,114 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2025-08-28 14:55:19,115 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:55:19,118 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++-------- 2025-08-28 14:55:19,118 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 8 deletions(-) 2025-08-28 14:55:19,349 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:19,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:55:19,584 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...530b6b0ab1346ef837188b2eb3b1a5f679b490b6' 2025-08-28 14:55:19,589 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:55:19,591 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 71 (Escape slash character in image names) 530b6b0ab1346ef837188b2eb3b1a5f679b490b6' 2025-08-28 14:55:19,602 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2025-08-28 14:55:19,603 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:55:19,606 [ scc.git] DEBUG src/omero_cli_render.py | 21 ++++++++++++++------- 2025-08-28 14:55:19,606 [ scc.git] DEBUG 1 file changed, 14 insertions(+), 7 deletions(-) 2025-08-28 14:55:19,836 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:20,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:55:20,040 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 14:55:20,083 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:55:20,083 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:55:20,086 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:55:20,128 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 14:55:20,131 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe59e3bd110> has no local changes 2025-08-28 14:55:20,132 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 69 dominikl 'Fix help text for impo/export commands' - PR 71 dominikl 'Escape slash character in image names' Generated by OMERO-plugins-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/)' 2025-08-28 14:55:20,138 [ scc.git] DEBUG [detached HEAD 85d6ed2] merge master -Dorg -Ssuccess-only 2025-08-28 14:55:20,138 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:55:20,138 [ scc.repo] DEBUG ## PRs found: 2025-08-28 14:55:20,292 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:20,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2025-08-28 14:55:21,144 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:21,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/180 HTTP/1.1" 200 None 2025-08-28 14:55:21,718 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:22,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/180/comments HTTP/1.1" 200 None 2025-08-28 14:55:22,268 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:22,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c7eaf3d6dfd78bcb4c6a63350b62862c4ba33522 HTTP/1.1" 200 None 2025-08-28 14:55:22,825 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:23,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c7eaf3d6dfd78bcb4c6a63350b62862c4ba33522/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:55:23,360 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:23,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c7eaf3d6dfd78bcb4c6a63350b62862c4ba33522/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:55:23,922 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:24,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c7eaf3d6dfd78bcb4c6a63350b62862c4ba33522 HTTP/1.1" 200 None 2025-08-28 14:55:24,478 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:24,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/c7eaf3d6dfd78bcb4c6a63350b62862c4ba33522?per_page=1 HTTP/1.1" 200 None 2025-08-28 14:55:24,969 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:25,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c7eaf3d6dfd78bcb4c6a63350b62862c4ba33522 HTTP/1.1" 200 None 2025-08-28 14:55:25,502 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:25,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/c7eaf3d6dfd78bcb4c6a63350b62862c4ba33522/status HTTP/1.1" 200 None 2025-08-28 14:55:25,766 [ scc.repo] DEBUG - PR 180 will-moore 'Register command' 2025-08-28 14:55:26,017 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:26,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2025-08-28 14:55:26,678 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:26,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2025-08-28 14:55:27,246 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:27,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-08-28 14:55:27,828 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:28,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:55:28,360 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:28,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:55:28,895 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:29,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-08-28 14:55:29,387 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:29,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bb180dbb97ddc67cd2cf655d56058ba7da765769?per_page=1 HTTP/1.1" 200 None 2025-08-28 14:55:29,866 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:30,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-08-28 14:55:30,392 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:30,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/status HTTP/1.1" 200 None 2025-08-28 14:55:30,643 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2025-08-28 14:55:30,894 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:31,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2025-08-28 14:55:31,550 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:31,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2025-08-28 14:55:32,095 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:32,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None 2025-08-28 14:55:32,663 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:32,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None 2025-08-28 14:55:33,240 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:33,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2025-08-28 14:55:33,792 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:34,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/169 HTTP/1.1" 200 None 2025-08-28 14:55:34,389 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:34,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2025-08-28 14:55:34,969 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:35,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2025-08-28 14:55:35,481 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:35,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2025-08-28 14:55:36,042 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:36,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2025-08-28 14:55:36,599 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:36,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2025-08-28 14:55:37,178 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:37,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2025-08-28 14:55:37,769 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:38,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2025-08-28 14:55:38,059 [ scc.repo] DEBUG ## Branches found: 2025-08-28 14:55:38,059 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-08-28 14:55:38,059 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:55:38,059 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:55:38,062 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 14:55:38,064 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 14:55:38,064 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 14:55:38,068 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 14:55:38,082 [ scc.git] DEBUG Updating 11d3587..f7eea7c 2025-08-28 14:55:38,309 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:38,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2025-08-28 14:55:39,201 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:39,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2025-08-28 14:55:39,974 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:40,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2025-08-28 14:55:40,726 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:41,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2025-08-28 14:55:41,467 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:41,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2025-08-28 14:55:42,181 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:42,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2025-08-28 14:55:42,900 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:43,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2025-08-28 14:55:43,424 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2025-08-28 14:55:43,713 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-08-28 14:55:43,713 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2025-08-28 14:55:43,717 [ scc.git] DEBUG Calling 'git fetch origin pull/180/head' 2025-08-28 14:55:44,166 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-08-28 14:55:44,166 [ scc.git] DEBUG * branch refs/pull/180/head -> FETCH_HEAD 2025-08-28 14:55:44,169 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 14:55:44,169 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:55:44,169 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:55:44,171 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-08-28 14:55:44,175 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:55:44,177 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-08-28 14:55:44,187 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:55:44,190 [ scc.git] DEBUG CHANGELOG.md | 4 ++-- 2025-08-28 14:55:44,190 [ scc.git] DEBUG src/omero_zarr/masks.py | 11 +++++------ 2025-08-28 14:55:44,190 [ scc.git] DEBUG test/integration/clitest/test_export.py | 32 ++++++++++++++++++-------------- 2025-08-28 14:55:44,190 [ scc.git] DEBUG 3 files changed, 25 insertions(+), 22 deletions(-) 2025-08-28 14:55:44,193 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:44,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:55:44,400 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c7eaf3d6dfd78bcb4c6a63350b62862c4ba33522' 2025-08-28 14:55:44,405 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:55:44,408 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 180 (Register command) c7eaf3d6dfd78bcb4c6a63350b62862c4ba33522' 2025-08-28 14:55:44,419 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2025-08-28 14:55:44,420 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:55:44,424 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 5 +- 2025-08-28 14:55:44,424 [ scc.git] DEBUG .isort.cfg | 2 +- 2025-08-28 14:55:44,424 [ scc.git] DEBUG src/omero_zarr/cli.py | 55 +++ 2025-08-28 14:55:44,424 [ scc.git] DEBUG src/omero_zarr/import_xml.py | 147 ++++++ 2025-08-28 14:55:44,424 [ scc.git] DEBUG src/omero_zarr/register.py | 717 ++++++++++++++++++++++++++++++ 2025-08-28 14:55:44,424 [ scc.git] DEBUG test/integration/clitest/test_register.py | 165 +++++++ 2025-08-28 14:55:44,424 [ scc.git] DEBUG 6 files changed, 1088 insertions(+), 3 deletions(-) 2025-08-28 14:55:44,424 [ scc.git] DEBUG create mode 100644 src/omero_zarr/import_xml.py 2025-08-28 14:55:44,425 [ scc.git] DEBUG create mode 100644 src/omero_zarr/register.py 2025-08-28 14:55:44,425 [ scc.git] DEBUG create mode 100644 test/integration/clitest/test_register.py 2025-08-28 14:55:44,652 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:44,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:55:44,846 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 14:55:44,888 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:55:44,889 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:55:44,891 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:55:44,930 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 14:55:44,934 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe59e334850> has no local changes 2025-08-28 14:55:44,934 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 174 will-moore 'Skip wells' (stage: draft) - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..f7eea7c Previously merged: - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 180 will-moore 'Register command' Generated by OMERO-plugins-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/)' 2025-08-28 14:55:44,942 [ scc.git] DEBUG [detached HEAD 6c51d72] merge master -Dorg -Ssuccess-only 2025-08-28 14:55:44,942 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:55:44,942 [ scc.repo] DEBUG ## PRs found: 2025-08-28 14:55:45,098 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:45,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2025-08-28 14:55:45,845 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:46,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2025-08-28 14:55:46,417 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:47,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2025-08-28 14:55:47,296 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:47,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/639 HTTP/1.1" 200 None 2025-08-28 14:55:47,925 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-28 14:55:48,176 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:48,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf HTTP/1.1" 200 None 2025-08-28 14:55:48,756 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:49,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:55:49,339 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:49,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:55:49,969 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:50,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf HTTP/1.1" 200 None 2025-08-28 14:55:50,926 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:51,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ea5d315d21af32b6ce5529e86b939672d110c8cf?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:55:51,149 [ scc.repo] DEBUG - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7' 2025-08-28 14:55:51,400 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:51,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637 HTTP/1.1" 200 None 2025-08-28 14:55:51,928 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:52,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637/comments HTTP/1.1" 200 None 2025-08-28 14:55:52,228 [ scc.repo] DEBUG # ... Include label: include 2025-08-28 14:55:52,480 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:53,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d15ebc233eb1b3e235bad4fe780e78c80339f39e HTTP/1.1" 200 None 2025-08-28 14:55:53,263 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:53,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d15ebc233eb1b3e235bad4fe780e78c80339f39e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:55:53,789 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:54,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d15ebc233eb1b3e235bad4fe780e78c80339f39e HTTP/1.1" 200 None 2025-08-28 14:55:54,574 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:54,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/d15ebc233eb1b3e235bad4fe780e78c80339f39e?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:55:54,834 [ scc.repo] DEBUG - PR 637 Rdornier 'Fix scalebar position' 2025-08-28 14:55:55,085 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:55,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/630 HTTP/1.1" 200 None 2025-08-28 14:55:55,739 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:56,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/630/comments HTTP/1.1" 200 None 2025-08-28 14:55:56,320 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:56,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29 HTTP/1.1" 200 None 2025-08-28 14:55:56,923 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:57,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:55:57,441 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:57,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:55:58,003 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:58,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29 HTTP/1.1" 200 None 2025-08-28 14:55:58,594 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:58,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/7a71d8f456b659444095e496a4c6d2449c306a29?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:55:58,822 [ scc.repo] DEBUG - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2025-08-28 14:55:59,074 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:59,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/619 HTTP/1.1" 200 None 2025-08-28 14:55:59,618 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:55:59,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/616 HTTP/1.1" 200 None 2025-08-28 14:56:00,245 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:00,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/616/comments HTTP/1.1" 200 None 2025-08-28 14:56:00,516 [ scc.repo] DEBUG # ... Include label: include 2025-08-28 14:56:00,767 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:01,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/83df5184c9424f29b3f8b578d50a0e9d0be3c363 HTTP/1.1" 200 None 2025-08-28 14:56:01,388 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:01,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/83df5184c9424f29b3f8b578d50a0e9d0be3c363/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:56:02,057 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:02,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/83df5184c9424f29b3f8b578d50a0e9d0be3c363 HTTP/1.1" 200 None 2025-08-28 14:56:02,597 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:02,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/83df5184c9424f29b3f8b578d50a0e9d0be3c363?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:56:02,824 [ scc.repo] DEBUG - PR 616 Rdornier 'Fix labels around border' 2025-08-28 14:56:03,077 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:03,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/612 HTTP/1.1" 200 None 2025-08-28 14:56:03,683 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:03,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/612/comments HTTP/1.1" 200 None 2025-08-28 14:56:04,227 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:04,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36 HTTP/1.1" 200 None 2025-08-28 14:56:04,803 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:05,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:56:05,432 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:05,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:56:06,049 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:06,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36 HTTP/1.1" 200 None 2025-08-28 14:56:06,646 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:06,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/9ae98a37ea474db7d473b99abb884cd4b1fdfb36?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:56:06,904 [ scc.repo] DEBUG - PR 612 will-moore 'Script version' 2025-08-28 14:56:07,156 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:07,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610 HTTP/1.1" 200 None 2025-08-28 14:56:07,720 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:07,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610/comments HTTP/1.1" 200 None 2025-08-28 14:56:08,243 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:08,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None 2025-08-28 14:56:08,825 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:09,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:56:09,437 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:09,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:56:10,004 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:10,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None 2025-08-28 14:56:10,514 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:10,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/59ca9bf79effaded86845d8c49fb94bda6727333?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:56:10,746 [ scc.repo] DEBUG - PR 610 will-moore 'Add docs/contributing.rst' 2025-08-28 14:56:10,998 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:11,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/605 HTTP/1.1" 200 None 2025-08-28 14:56:11,577 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:11,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/605/comments HTTP/1.1" 200 None 2025-08-28 14:56:12,135 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:12,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895 HTTP/1.1" 200 None 2025-08-28 14:56:12,776 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:13,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:56:13,336 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:13,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:56:14,011 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:14,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895 HTTP/1.1" 200 None 2025-08-28 14:56:14,614 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:14,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/8996880bb97573423561afaca6de24e03ec57895?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:56:14,849 [ scc.repo] DEBUG - PR 605 Tom-TBT 'Colorbar feature' 2025-08-28 14:56:15,101 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:15,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2025-08-28 14:56:15,709 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:15,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2025-08-28 14:56:16,049 [ scc.repo] DEBUG # ... Include label: include 2025-08-28 14:56:16,299 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:16,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25 HTTP/1.1" 200 None 2025-08-28 14:56:16,922 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:17,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:56:17,446 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:17,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25 HTTP/1.1" 200 None 2025-08-28 14:56:18,084 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:18,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:56:18,290 [ scc.repo] DEBUG - PR 600 Rdornier 'Label on rois' 2025-08-28 14:56:18,290 [ scc.repo] DEBUG ## Branches found: 2025-08-28 14:56:18,290 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-08-28 14:56:18,291 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:56:18,291 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:56:18,294 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 14:56:18,297 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 14:56:18,297 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 14:56:18,301 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 14:56:18,317 [ scc.git] DEBUG Updating 9cc36cde..d2c6f5bc 2025-08-28 14:56:18,542 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:19,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2025-08-28 14:56:19,273 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:19,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2025-08-28 14:56:20,022 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:20,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2025-08-28 14:56:20,813 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:21,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2025-08-28 14:56:21,569 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:22,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2025-08-28 14:56:22,073 [ scc.git] DEBUG Calling 'git fetch origin pull/600/head' 2025-08-28 14:56:22,473 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-28 14:56:22,473 [ scc.git] DEBUG * branch refs/pull/600/head -> FETCH_HEAD 2025-08-28 14:56:22,477 [ scc.git] DEBUG Calling 'git fetch origin pull/605/head' 2025-08-28 14:56:22,769 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-28 14:56:22,769 [ scc.git] DEBUG * branch refs/pull/605/head -> FETCH_HEAD 2025-08-28 14:56:22,774 [ scc.git] DEBUG Calling 'git fetch origin pull/610/head' 2025-08-28 14:56:23,073 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-28 14:56:23,073 [ scc.git] DEBUG * branch refs/pull/610/head -> FETCH_HEAD 2025-08-28 14:56:23,077 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-08-28 14:56:26,441 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-28 14:56:26,441 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-08-28 14:56:26,446 [ scc.git] DEBUG Calling 'git fetch origin pull/616/head' 2025-08-28 14:56:26,761 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-28 14:56:26,761 [ scc.git] DEBUG * branch refs/pull/616/head -> FETCH_HEAD 2025-08-28 14:56:26,765 [ scc.git] DEBUG Calling 'git fetch origin pull/630/head' 2025-08-28 14:56:28,116 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-28 14:56:28,116 [ scc.git] DEBUG * branch refs/pull/630/head -> FETCH_HEAD 2025-08-28 14:56:28,121 [ scc.git] DEBUG Calling 'git fetch origin pull/637/head' 2025-08-28 14:56:28,444 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-28 14:56:28,444 [ scc.git] DEBUG * branch refs/pull/637/head -> FETCH_HEAD 2025-08-28 14:56:28,449 [ scc.git] DEBUG Calling 'git fetch origin pull/639/head' 2025-08-28 14:56:28,742 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-28 14:56:28,742 [ scc.git] DEBUG * branch refs/pull/639/head -> FETCH_HEAD 2025-08-28 14:56:28,747 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 14:56:28,747 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:56:28,747 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:56:28,749 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25' 2025-08-28 14:56:28,756 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:56:28,759 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 600 (Label on rois) 54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25' 2025-08-28 14:56:28,778 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:56:28,789 [ scc.git] DEBUG .gitignore | 2 + 2025-08-28 14:56:28,789 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 274 +++++++- 2025-08-28 14:56:28,789 [ scc.git] DEBUG src/css/figure.css | 20 +- 2025-08-28 14:56:28,789 [ scc.git] DEBUG src/images/text-icon-24.png | Bin 0 -> 2477 bytes 2025-08-28 14:56:28,789 [ scc.git] DEBUG src/index.html | 34 +- 2025-08-28 14:56:28,789 [ scc.git] DEBUG src/js/models/panel_model.js | 69 +- 2025-08-28 14:56:28,789 [ scc.git] DEBUG src/js/shapeEditorTest.js | 29 +- 2025-08-28 14:56:28,789 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 208 +++++- 2025-08-28 14:56:28,789 [ scc.git] DEBUG src/js/shape_editor/line.js | 215 +++++- 2025-08-28 14:56:28,789 [ scc.git] DEBUG src/js/shape_editor/point.js | 203 +++++- 2025-08-28 14:56:28,789 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 207 +++++- 2025-08-28 14:56:28,789 [ scc.git] DEBUG src/js/shape_editor/rect.js | 212 +++++- 2025-08-28 14:56:28,789 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 411 ++++++++++- 2025-08-28 14:56:28,790 [ scc.git] DEBUG src/js/shape_editor/text.js | 754 +++++++++++++++++++++ 2025-08-28 14:56:28,792 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +- 2025-08-28 14:56:28,792 [ scc.git] DEBUG src/js/views/right_panel_view.js | 121 +++- 2025-08-28 14:56:28,792 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 57 +- 2025-08-28 14:56:28,792 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:28,792 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 182 ++++- 2025-08-28 14:56:28,792 [ scc.git] DEBUG src/shapeEditorTest.html | 37 +- 2025-08-28 14:56:28,792 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 4 +- 2025-08-28 14:56:28,792 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 51 ++ 2025-08-28 14:56:28,792 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 382 +++++++---- 2025-08-28 14:56:28,792 [ scc.git] DEBUG 22 files changed, 3249 insertions(+), 225 deletions(-) 2025-08-28 14:56:28,792 [ scc.git] DEBUG create mode 100644 src/images/text-icon-24.png 2025-08-28 14:56:28,792 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/text.js 2025-08-28 14:56:28,792 [ scc.git] DEBUG create mode 100644 src/templates/shapes/shape_sidebar.template.html 2025-08-28 14:56:29,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:56:29,035 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8996880bb97573423561afaca6de24e03ec57895' 2025-08-28 14:56:29,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:56:29,045 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 605 (Colorbar feature) 8996880bb97573423561afaca6de24e03ec57895' 2025-08-28 14:56:29,074 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-08-28 14:56:29,074 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-08-28 14:56:29,074 [ scc.git] DEBUG Auto-merging src/index.html 2025-08-28 14:56:29,074 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2025-08-28 14:56:29,074 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2025-08-28 14:56:29,074 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2025-08-28 14:56:29,075 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:56:29,081 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 392 +++++++++++++++++++-- 2025-08-28 14:56:29,081 [ scc.git] DEBUG src/css/figure.css | 133 ++++++- 2025-08-28 14:56:29,081 [ scc.git] DEBUG src/index.html | 4 + 2025-08-28 14:56:29,081 [ scc.git] DEBUG src/js/models/panel_model.js | 169 +++++++-- 2025-08-28 14:56:29,081 [ scc.git] DEBUG src/js/views/colorbar_form_view.js | 124 +++++++ 2025-08-28 14:56:29,081 [ scc.git] DEBUG src/js/views/lutpicker.js | 67 ++-- 2025-08-28 14:56:29,081 [ scc.git] DEBUG src/js/views/panel_view.js | 79 ++++- 2025-08-28 14:56:29,081 [ scc.git] DEBUG src/js/views/right_panel_view.js | 13 + 2025-08-28 14:56:29,081 [ scc.git] DEBUG src/templates/colorbar.template.html | 42 +++ 2025-08-28 14:56:29,081 [ scc.git] DEBUG src/templates/colorbar_form.template.html | 137 +++++++ 2025-08-28 14:56:29,082 [ scc.git] DEBUG 10 files changed, 1080 insertions(+), 80 deletions(-) 2025-08-28 14:56:29,082 [ scc.git] DEBUG create mode 100644 src/js/views/colorbar_form_view.js 2025-08-28 14:56:29,082 [ scc.git] DEBUG create mode 100644 src/templates/colorbar.template.html 2025-08-28 14:56:29,082 [ scc.git] DEBUG create mode 100644 src/templates/colorbar_form.template.html 2025-08-28 14:56:29,287 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:29,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:56:29,493 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...59ca9bf79effaded86845d8c49fb94bda6727333' 2025-08-28 14:56:29,500 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:56:29,502 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 610 (Add docs/contributing.rst) 59ca9bf79effaded86845d8c49fb94bda6727333' 2025-08-28 14:56:29,520 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:56:29,524 [ scc.git] DEBUG .github/PULL_REQUEST_TEMPLATE.md | 5 +++ 2025-08-28 14:56:29,524 [ scc.git] DEBUG README.rst | 4 +- 2025-08-28 14:56:29,524 [ scc.git] DEBUG docs/contributing.md | 89 ++++++++++++++++++++++++++++++++++++++++ 2025-08-28 14:56:29,524 [ scc.git] DEBUG 3 files changed, 97 insertions(+), 1 deletion(-) 2025-08-28 14:56:29,524 [ scc.git] DEBUG create mode 100644 .github/PULL_REQUEST_TEMPLATE.md 2025-08-28 14:56:29,524 [ scc.git] DEBUG create mode 100644 docs/contributing.md 2025-08-28 14:56:29,744 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:29,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:56:29,947 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9ae98a37ea474db7d473b99abb884cd4b1fdfb36' 2025-08-28 14:56:29,955 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:56:29,957 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Script version) 9ae98a37ea474db7d473b99abb884cd4b1fdfb36' 2025-08-28 14:56:29,987 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-08-28 14:56:29,987 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-28 14:56:29,987 [ scc.git] DEBUG Auto-merging package.json 2025-08-28 14:56:29,987 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-08-28 14:56:29,987 [ scc.git] DEBUG Auto-merging src/index.html 2025-08-28 14:56:29,988 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:56:29,996 [ scc.git] DEBUG .bumpversion.cfg | 2 + 2025-08-28 14:56:29,997 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 7 +- 2025-08-28 14:56:29,997 [ scc.git] DEBUG omero_figure/urls.py | 3 + 2025-08-28 14:56:29,997 [ scc.git] DEBUG omero_figure/views.py | 54 ++++++++++++++ 2025-08-28 14:56:29,997 [ scc.git] DEBUG package-lock.json | 8 +- 2025-08-28 14:56:29,997 [ scc.git] DEBUG package.json | 3 +- 2025-08-28 14:56:29,997 [ scc.git] DEBUG src/css/figure.css | 2 +- 2025-08-28 14:56:29,997 [ scc.git] DEBUG src/html/dialogs/scriptManagerDialog.html | 86 ++++++++++++++++++++++ 2025-08-28 14:56:29,997 [ scc.git] DEBUG src/index.html | 20 +++-- 2025-08-28 14:56:29,997 [ scc.git] DEBUG src/js/views/figure_view.js | 54 ++++++++++++++ 2025-08-28 14:56:29,997 [ scc.git] DEBUG vite.config.js | 3 + 2025-08-28 14:56:29,997 [ scc.git] DEBUG 11 files changed, 230 insertions(+), 12 deletions(-) 2025-08-28 14:56:29,997 [ scc.git] DEBUG create mode 100644 src/html/dialogs/scriptManagerDialog.html 2025-08-28 14:56:30,199 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:30,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:56:30,416 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...83df5184c9424f29b3f8b578d50a0e9d0be3c363' 2025-08-28 14:56:30,425 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:56:30,428 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 616 (Fix labels around border) 83df5184c9424f29b3f8b578d50a0e9d0be3c363' 2025-08-28 14:56:30,452 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-08-28 14:56:30,452 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2025-08-28 14:56:30,452 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2025-08-28 14:56:30,452 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/panel_view.js 2025-08-28 14:56:30,453 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-28 14:56:30,453 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-28 14:56:30,458 [ scc.git] DEBUG Calling 'git reset --hard df2cc72679ab84a047b70bf7fdc51b775f055fd6' 2025-08-28 14:56:30,465 [ scc.git] DEBUG HEAD is now at df2cc726 merge master -Dorg -Ssuccess-only: PR 612 (Script version) 2025-08-28 14:56:30,668 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:30,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:56:30,875 [ scc.git] DEBUG Calling 'git merge-base d2c6f5bc061df1e02422728732b07ae7a929ccb2 83df5184c9424f29b3f8b578d50a0e9d0be3c363' 2025-08-28 14:56:30,880 [ scc.git] DEBUG Calling 'git diff --name-only d2c6f5bc061df1e02422728732b07ae7a929ccb2..d2c6f5bc061df1e02422728732b07ae7a929ccb2' 2025-08-28 14:56:30,883 [ scc.git] INFO - PR 616 Rdornier 'Fix labels around border' Conflicting PR. Removed from build [OMERO-plugins-push#518](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/js/views/panel_view.js - PR #605 Tom-TBT 'Colorbar feature' - src/js/views/panel_view.js --conflicts 2025-08-28 14:56:30,885 [ scc.config] DEBUG Found github.token 2025-08-28 14:56:30,885 [ scc.git] DEBUG Not adding comment to issue #616, already --conflicts. 2025-08-28 14:56:30,885 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7a71d8f456b659444095e496a4c6d2449c306a29' 2025-08-28 14:56:30,893 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:56:30,895 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 630 (Fix color and position for ALL new panel insets) 7a71d8f456b659444095e496a4c6d2449c306a29' 2025-08-28 14:56:30,913 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2025-08-28 14:56:30,913 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/right_panel_view.js 2025-08-28 14:56:30,913 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-28 14:56:30,914 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-28 14:56:30,918 [ scc.git] DEBUG Calling 'git reset --hard df2cc72679ab84a047b70bf7fdc51b775f055fd6' 2025-08-28 14:56:30,926 [ scc.git] DEBUG HEAD is now at df2cc726 merge master -Dorg -Ssuccess-only: PR 612 (Script version) 2025-08-28 14:56:31,127 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:31,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:56:31,333 [ scc.git] DEBUG Calling 'git merge-base d2c6f5bc061df1e02422728732b07ae7a929ccb2 7a71d8f456b659444095e496a4c6d2449c306a29' 2025-08-28 14:56:31,337 [ scc.git] DEBUG Calling 'git diff --name-only 9cc36cde05bde4def7b62b07c2e9ae5f66712e96..d2c6f5bc061df1e02422728732b07ae7a929ccb2' 2025-08-28 14:56:31,341 [ scc.git] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' Conflicting PR. Removed from build [OMERO-plugins-push#518](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/js/views/right_panel_view.js - PR #605 Tom-TBT 'Colorbar feature' - src/js/views/right_panel_view.js --conflicts 2025-08-28 14:56:31,343 [ scc.config] DEBUG Found github.token 2025-08-28 14:56:31,343 [ scc.git] DEBUG Not adding comment to issue #630, already --conflicts. 2025-08-28 14:56:31,343 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d15ebc233eb1b3e235bad4fe780e78c80339f39e' 2025-08-28 14:56:31,352 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:56:31,354 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 637 (Fix scalebar position) d15ebc233eb1b3e235bad4fe780e78c80339f39e' 2025-08-28 14:56:31,379 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-08-28 14:56:31,379 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-08-28 14:56:31,379 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2025-08-28 14:56:31,379 [ scc.git] DEBUG Auto-merging src/templates/scalebar_form.template.html 2025-08-28 14:56:31,379 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/templates/scalebar_form.template.html 2025-08-28 14:56:31,379 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-28 14:56:31,380 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-28 14:56:31,384 [ scc.git] DEBUG Calling 'git reset --hard df2cc72679ab84a047b70bf7fdc51b775f055fd6' 2025-08-28 14:56:31,392 [ scc.git] DEBUG HEAD is now at df2cc726 merge master -Dorg -Ssuccess-only: PR 612 (Script version) 2025-08-28 14:56:31,585 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:31,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:56:31,840 [ scc.git] DEBUG Calling 'git merge-base d2c6f5bc061df1e02422728732b07ae7a929ccb2 d15ebc233eb1b3e235bad4fe780e78c80339f39e' 2025-08-28 14:56:31,845 [ scc.git] DEBUG Calling 'git diff --name-only d2c6f5bc061df1e02422728732b07ae7a929ccb2..d2c6f5bc061df1e02422728732b07ae7a929ccb2' 2025-08-28 14:56:31,848 [ scc.git] INFO - PR 637 Rdornier 'Fix scalebar position' Conflicting PR. Removed from build [OMERO-plugins-push#518](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/templates/scalebar_form.template.html --conflicts 2025-08-28 14:56:31,850 [ scc.config] DEBUG Found github.token 2025-08-28 14:56:31,850 [ scc.git] DEBUG Not adding comment to issue #637, already --conflicts. 2025-08-28 14:56:31,851 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ea5d315d21af32b6ce5529e86b939672d110c8cf' 2025-08-28 14:56:31,858 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:56:31,861 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 639 (Bump vite from 6.2.6 to 6.2.7) ea5d315d21af32b6ce5529e86b939672d110c8cf' 2025-08-28 14:56:31,878 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-28 14:56:31,878 [ scc.git] DEBUG Auto-merging package.json 2025-08-28 14:56:31,879 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:56:31,883 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2025-08-28 14:56:31,883 [ scc.git] DEBUG package.json | 2 +- 2025-08-28 14:56:31,883 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2025-08-28 14:56:32,092 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:32,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:56:32,638 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 14:56:32,680 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:56:32,680 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:56:32,682 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:56:32,722 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 14:56:32,728 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe59e3c9ad0> has no local changes 2025-08-28 14:56:32,728 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) - PR 619 will-moore 'OME-Zarr support' (stage: draft) - PR 543 will-moore 'Plate well labels' (exclude comment) Updating 9cc36cde..d2c6f5bc Previously merged: - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 600 Rdornier 'Label on rois' - PR 605 Tom-TBT 'Colorbar feature' - PR 610 will-moore 'Add docs/contributing.rst' - PR 612 will-moore 'Script version' - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7' Conflicting PRs (not included): - PR 616 Rdornier 'Fix labels around border' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 637 Rdornier 'Fix scalebar position' Generated by OMERO-plugins-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/)' 2025-08-28 14:56:32,737 [ scc.git] DEBUG [detached HEAD 72ce7007] merge master -Dorg -Ssuccess-only 2025-08-28 14:56:32,737 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:56:32,737 [ scc.repo] DEBUG ## PRs found: 2025-08-28 14:56:32,891 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:33,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2025-08-28 14:56:33,519 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:33,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2025-08-28 14:56:34,087 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:34,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2025-08-28 14:56:34,673 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:35,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-08-28 14:56:35,313 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:35,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:56:35,868 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:36,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-08-28 14:56:36,484 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:36,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:56:36,740 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2025-08-28 14:56:36,740 [ scc.repo] DEBUG ## Branches found: 2025-08-28 14:56:36,740 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-08-28 14:56:36,740 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:56:36,740 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:56:36,743 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 14:56:36,747 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 14:56:36,747 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 14:56:36,750 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 14:56:36,753 [ scc.git] DEBUG Already up to date. 2025-08-28 14:56:36,753 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2025-08-28 14:56:37,046 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2025-08-28 14:56:37,046 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2025-08-28 14:56:37,051 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 14:56:37,051 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:56:37,051 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:56:37,053 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-08-28 14:56:37,057 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:56:37,059 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-08-28 14:56:37,066 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2025-08-28 14:56:37,067 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:56:37,070 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2025-08-28 14:56:37,070 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2025-08-28 14:56:37,073 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:37,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:56:37,287 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 14:56:37,329 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:56:37,329 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:56:37,331 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:56:37,372 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 14:56:37,375 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe59e34cf90> has no local changes 2025-08-28 14:56:37,375 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/)' 2025-08-28 14:56:37,382 [ scc.git] DEBUG [detached HEAD 7c63fe2] merge master -Dorg -Ssuccess-only 2025-08-28 14:56:37,382 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:56:37,382 [ scc.repo] DEBUG ## PRs found: 2025-08-28 14:56:37,539 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:37,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2025-08-28 14:56:38,085 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:38,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2025-08-28 14:56:38,630 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:38,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2025-08-28 14:56:39,187 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:39,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2025-08-28 14:56:39,492 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-28 14:56:39,743 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:40,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2025-08-28 14:56:40,496 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:40,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:56:41,118 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:41,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:56:41,705 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:41,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2025-08-28 14:56:42,227 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:42,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:56:42,485 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2025-08-28 14:56:42,738 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:43,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2025-08-28 14:56:43,299 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:43,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2025-08-28 14:56:43,854 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:44,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2025-08-28 14:56:44,153 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-28 14:56:44,404 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:44,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-08-28 14:56:45,200 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:45,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:56:45,783 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:46,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:56:46,401 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:46,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-08-28 14:56:46,911 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:47,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:56:47,209 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-08-28 14:56:47,461 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:48,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2025-08-28 14:56:48,028 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-28 14:56:48,280 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:48,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-08-28 14:56:48,920 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:49,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:56:49,536 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:49,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:56:50,130 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:50,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-08-28 14:56:50,730 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:51,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:56:51,138 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-08-28 14:56:51,391 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:51,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2025-08-28 14:56:51,668 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-28 14:56:51,920 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:52,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-08-28 14:56:52,974 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:53,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:56:53,540 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:53,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:56:54,154 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:54,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-08-28 14:56:54,772 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:54,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:56:54,984 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-08-28 14:56:55,236 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:55,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2025-08-28 14:56:55,772 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:56,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2025-08-28 14:56:56,050 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-28 14:56:56,302 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:56,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-08-28 14:56:56,988 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:57,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:56:57,571 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:57,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:56:58,195 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:58,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-08-28 14:56:58,786 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:59,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:56:59,093 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-08-28 14:56:59,345 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:56:59,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2025-08-28 14:56:59,613 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-28 14:56:59,865 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:00,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-08-28 14:57:00,540 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:00,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:57:01,085 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:01,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:57:01,748 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:02,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-08-28 14:57:02,351 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:02,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:57:02,610 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-08-28 14:57:02,861 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:03,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2025-08-28 14:57:03,160 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-28 14:57:03,412 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:03,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-08-28 14:57:04,055 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:04,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:57:04,623 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:04,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:57:05,232 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:05,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-08-28 14:57:05,847 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:06,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:57:06,084 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-08-28 14:57:06,084 [ scc.repo] DEBUG ## Branches found: 2025-08-28 14:57:06,084 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-08-28 14:57:06,085 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:57:06,085 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:06,087 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 14:57:06,090 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 14:57:06,090 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 14:57:06,093 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 14:57:06,097 [ scc.git] DEBUG Already up to date. 2025-08-28 14:57:06,097 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2025-08-28 14:57:06,529 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-28 14:57:06,529 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2025-08-28 14:57:06,533 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2025-08-28 14:57:06,827 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-28 14:57:06,827 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2025-08-28 14:57:06,831 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2025-08-28 14:57:07,118 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-28 14:57:07,118 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2025-08-28 14:57:07,122 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2025-08-28 14:57:07,419 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-28 14:57:07,419 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2025-08-28 14:57:07,423 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2025-08-28 14:57:07,717 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-28 14:57:07,717 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2025-08-28 14:57:07,721 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2025-08-28 14:57:08,036 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-28 14:57:08,036 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2025-08-28 14:57:08,040 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2025-08-28 14:57:08,332 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-28 14:57:08,332 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2025-08-28 14:57:08,336 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 14:57:08,336 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:57:08,336 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:08,339 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-08-28 14:57:08,342 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:08,344 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-08-28 14:57:08,353 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:57:08,358 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2025-08-28 14:57:08,359 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2025-08-28 14:57:08,361 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:08,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:57:08,601 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-08-28 14:57:08,604 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:08,606 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-08-28 14:57:08,622 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-28 14:57:08,623 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:57:08,628 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2025-08-28 14:57:08,628 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2025-08-28 14:57:08,852 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:09,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:57:09,066 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-08-28 14:57:09,069 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:09,071 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-08-28 14:57:09,087 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-28 14:57:09,087 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-08-28 14:57:09,087 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-28 14:57:09,087 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-28 14:57:09,090 [ scc.git] DEBUG Calling 'git reset --hard 99fc13b2b4b13ad9a37eb9d274f433bd073e37a7' 2025-08-28 14:57:09,095 [ scc.git] DEBUG HEAD is now at 99fc13b merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2025-08-28 14:57:09,318 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:09,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:57:09,521 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-08-28 14:57:09,524 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-08-28 14:57:09,527 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#518](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2025-08-28 14:57:09,529 [ scc.config] DEBUG Found github.token 2025-08-28 14:57:09,529 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2025-08-28 14:57:09,529 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-08-28 14:57:09,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:09,534 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-08-28 14:57:09,551 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-28 14:57:09,552 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:57:09,557 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2025-08-28 14:57:09,557 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2025-08-28 14:57:09,773 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:10,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:57:10,017 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-08-28 14:57:10,021 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:10,023 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-08-28 14:57:10,039 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-28 14:57:10,040 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:57:10,045 [ scc.git] DEBUG package-lock.json | 6 +++--- 2025-08-28 14:57:10,045 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2025-08-28 14:57:10,269 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:10,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:57:10,525 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-08-28 14:57:10,528 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:10,531 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-08-28 14:57:10,547 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-28 14:57:10,547 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-08-28 14:57:10,548 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-28 14:57:10,548 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-28 14:57:10,551 [ scc.git] DEBUG Calling 'git reset --hard beb8423c27aa6e8b2382ff74e6ebc0b10a6ce785' 2025-08-28 14:57:10,556 [ scc.git] DEBUG HEAD is now at beb8423 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-08-28 14:57:10,777 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:10,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:57:10,990 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-08-28 14:57:10,993 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-08-28 14:57:10,996 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#518](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2025-08-28 14:57:10,998 [ scc.config] DEBUG Found github.token 2025-08-28 14:57:10,998 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2025-08-28 14:57:10,998 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-08-28 14:57:11,001 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:11,003 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-08-28 14:57:11,022 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-28 14:57:11,022 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-08-28 14:57:11,022 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-28 14:57:11,023 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-28 14:57:11,025 [ scc.git] DEBUG Calling 'git reset --hard beb8423c27aa6e8b2382ff74e6ebc0b10a6ce785' 2025-08-28 14:57:11,031 [ scc.git] DEBUG HEAD is now at beb8423 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-08-28 14:57:11,242 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:11,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:57:11,874 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-08-28 14:57:11,878 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-08-28 14:57:11,881 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#518](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2025-08-28 14:57:11,883 [ scc.config] DEBUG Found github.token 2025-08-28 14:57:11,883 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2025-08-28 14:57:11,883 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 14:57:11,923 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:57:11,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:11,926 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:57:11,964 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 14:57:11,969 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe5a0f53d10> has no local changes 2025-08-28 14:57:11,969 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/)' 2025-08-28 14:57:11,977 [ scc.git] DEBUG [detached HEAD 2a4c0c5] merge master -Dorg -Ssuccess-only 2025-08-28 14:57:11,977 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:57:11,977 [ scc.repo] DEBUG ## PRs found: 2025-08-28 14:57:12,126 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:12,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2025-08-28 14:57:12,819 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:13,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2025-08-28 14:57:13,385 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:13,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2025-08-28 14:57:13,981 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:14,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None 2025-08-28 14:57:14,546 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:14,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None 2025-08-28 14:57:14,838 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-28 14:57:15,089 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:15,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2025-08-28 14:57:15,706 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:16,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:57:16,341 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:16,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:57:17,107 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:17,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2025-08-28 14:57:17,706 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:18,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:57:18,073 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2025-08-28 14:57:18,325 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:18,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2025-08-28 14:57:18,635 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-28 14:57:18,886 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:19,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-08-28 14:57:19,600 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:19,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:57:20,174 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:20,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:57:20,883 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:21,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-08-28 14:57:21,439 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:21,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:57:21,670 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-08-28 14:57:21,921 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:22,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2025-08-28 14:57:22,441 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:22,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2025-08-28 14:57:23,004 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:23,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2025-08-28 14:57:23,621 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:23,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2025-08-28 14:57:24,135 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:24,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-08-28 14:57:24,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:25,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:57:25,360 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:25,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-08-28 14:57:25,896 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:26,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:57:26,209 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2025-08-28 14:57:26,461 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:26,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2025-08-28 14:57:27,024 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:27,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2025-08-28 14:57:27,589 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:27,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-08-28 14:57:28,166 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:28,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:57:28,706 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:28,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-08-28 14:57:29,213 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:29,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:57:29,481 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2025-08-28 14:57:29,732 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:30,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2025-08-28 14:57:30,274 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:30,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2025-08-28 14:57:30,774 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:31,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-08-28 14:57:31,327 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:31,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:57:31,839 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:32,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-08-28 14:57:32,373 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:32,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:57:32,610 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2025-08-28 14:57:32,862 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:33,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2025-08-28 14:57:33,412 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:33,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2025-08-28 14:57:33,954 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:34,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None 2025-08-28 14:57:34,543 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:34,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:57:35,080 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:35,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:57:35,490 [ scc.repo] DEBUG ## Branches found: 2025-08-28 14:57:35,490 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-08-28 14:57:35,490 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:57:35,490 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:35,493 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 14:57:35,495 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 14:57:35,496 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 14:57:35,499 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 14:57:35,507 [ scc.git] DEBUG Updating 7a798ce..bb94cf8 2025-08-28 14:57:35,741 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:36,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2025-08-28 14:57:36,340 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2025-08-28 14:57:36,964 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-08-28 14:57:36,964 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2025-08-28 14:57:36,969 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2025-08-28 14:57:37,274 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-08-28 14:57:37,274 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2025-08-28 14:57:37,279 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2025-08-28 14:57:37,569 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-08-28 14:57:37,569 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2025-08-28 14:57:37,574 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2025-08-28 14:57:37,859 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-08-28 14:57:37,859 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2025-08-28 14:57:37,864 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head' 2025-08-28 14:57:38,149 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-08-28 14:57:38,149 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD 2025-08-28 14:57:38,154 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 14:57:38,154 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:57:38,154 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:38,156 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-08-28 14:57:38,163 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:38,165 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-08-28 14:57:38,179 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2025-08-28 14:57:38,179 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2025-08-28 14:57:38,180 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:57:38,184 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2025-08-28 14:57:38,184 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2025-08-28 14:57:38,184 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2025-08-28 14:57:38,186 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:38,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:57:38,408 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2025-08-28 14:57:38,415 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:38,418 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2025-08-28 14:57:38,437 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2025-08-28 14:57:38,437 [ scc.git] DEBUG Auto-merging src/app/context.js 2025-08-28 14:57:38,437 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2025-08-28 14:57:38,437 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2025-08-28 14:57:38,438 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:57:38,443 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2025-08-28 14:57:38,443 [ scc.git] DEBUG src/app/context.js | 6 +- 2025-08-28 14:57:38,443 [ scc.git] DEBUG src/app/header.html | 5 + 2025-08-28 14:57:38,443 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2025-08-28 14:57:38,443 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2025-08-28 14:57:38,443 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2025-08-28 14:57:38,443 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2025-08-28 14:57:38,443 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2025-08-28 14:57:38,660 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:38,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:57:38,945 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2025-08-28 14:57:38,951 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:38,954 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2025-08-28 14:57:38,969 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2025-08-28 14:57:38,970 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:57:38,973 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2025-08-28 14:57:38,973 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2025-08-28 14:57:38,973 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2025-08-28 14:57:39,197 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:39,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:57:39,419 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-08-28 14:57:39,425 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:39,428 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-08-28 14:57:39,444 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:57:39,454 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2025-08-28 14:57:39,454 [ scc.git] DEBUG package.json | 2 +- 2025-08-28 14:57:39,454 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2025-08-28 14:57:39,671 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:39,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:57:39,911 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-08-28 14:57:39,918 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:39,921 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-08-28 14:57:39,959 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-28 14:57:39,959 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-08-28 14:57:39,959 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-28 14:57:39,960 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-28 14:57:39,963 [ scc.git] DEBUG Calling 'git reset --hard 7e65b6f8973834253ed3c8581b6655ed7279afa3' 2025-08-28 14:57:39,970 [ scc.git] DEBUG HEAD is now at 7e65b6f merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) 2025-08-28 14:57:40,164 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:40,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:57:40,358 [ scc.git] DEBUG Calling 'git merge-base bb94cf8da960e3283090038b04432f301560f5e4 45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-08-28 14:57:40,361 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..bb94cf8da960e3283090038b04432f301560f5e4' 2025-08-28 14:57:40,364 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Conflicting PR. Removed from build [OMERO-plugins-push#518](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/consoleText) for more details. Possible conflicts: - PR #499 dependabot[bot] 'Bump nanoid and mocha' - package-lock.json --conflicts 2025-08-28 14:57:40,366 [ scc.config] DEBUG Found github.token 2025-08-28 14:57:40,366 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts. 2025-08-28 14:57:40,367 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 14:57:40,406 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:57:40,406 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:40,408 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:57:40,447 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 14:57:40,455 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe59e3dc890> has no local changes 2025-08-28 14:57:40,455 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..bb94cf8 Previously merged: - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Generated by OMERO-plugins-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/)' 2025-08-28 14:57:40,462 [ scc.git] DEBUG [detached HEAD 93c3ee7] merge master -Dorg -Ssuccess-only 2025-08-28 14:57:40,462 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:57:40,462 [ scc.repo] DEBUG ## PRs found: 2025-08-28 14:57:40,610 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:40,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2025-08-28 14:57:41,179 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:41,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2025-08-28 14:57:41,719 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:42,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2025-08-28 14:57:42,317 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:42,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:57:42,849 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:43,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2025-08-28 14:57:43,327 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:43,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:57:43,611 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-28 14:57:43,864 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:44,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2025-08-28 14:57:44,413 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:44,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2025-08-28 14:57:44,948 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:45,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-08-28 14:57:45,553 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:45,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:57:46,139 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:46,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-08-28 14:57:46,699 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:47,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:57:47,092 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2025-08-28 14:57:47,092 [ scc.repo] DEBUG ## Branches found: 2025-08-28 14:57:47,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-08-28 14:57:47,092 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:57:47,092 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:47,095 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 14:57:47,098 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 14:57:47,098 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 14:57:47,101 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 14:57:47,104 [ scc.git] DEBUG Already up to date. 2025-08-28 14:57:47,104 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2025-08-28 14:57:47,404 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-08-28 14:57:47,404 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2025-08-28 14:57:47,408 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2025-08-28 14:57:47,702 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-08-28 14:57:47,702 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2025-08-28 14:57:47,707 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 14:57:47,707 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:57:47,707 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:47,710 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-08-28 14:57:47,714 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:47,716 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-08-28 14:57:47,725 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:57:47,729 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2025-08-28 14:57:47,729 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2025-08-28 14:57:47,729 [ scc.git] DEBUG requirements.txt | 2 +- 2025-08-28 14:57:47,729 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2025-08-28 14:57:47,729 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2025-08-28 14:57:47,729 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2025-08-28 14:57:47,731 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:48,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:57:48,073 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2025-08-28 14:57:48,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:48,079 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2025-08-28 14:57:48,089 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:57:48,092 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-08-28 14:57:48,092 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-28 14:57:48,325 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:48,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:57:48,556 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 14:57:48,596 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:57:48,597 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:48,599 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:57:48,639 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 14:57:48,643 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe59e5faf50> has no local changes 2025-08-28 14:57:48,643 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/)' 2025-08-28 14:57:48,650 [ scc.git] DEBUG [detached HEAD 41f2436] merge master -Dorg -Ssuccess-only 2025-08-28 14:57:48,650 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:57:48,650 [ scc.repo] DEBUG ## PRs found: 2025-08-28 14:57:48,808 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:49,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2025-08-28 14:57:49,411 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:49,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2025-08-28 14:57:49,950 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:50,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2025-08-28 14:57:50,628 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:50,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-08-28 14:57:51,223 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:51,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:57:51,708 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:52,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-08-28 14:57:52,315 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:52,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:57:52,560 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-08-28 14:57:52,813 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:53,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2025-08-28 14:57:53,350 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:53,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2025-08-28 14:57:53,874 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:54,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-08-28 14:57:54,423 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:54,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:57:54,936 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:55,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-08-28 14:57:55,453 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:55,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:57:55,707 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-08-28 14:57:55,707 [ scc.repo] DEBUG ## Branches found: 2025-08-28 14:57:55,707 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-08-28 14:57:55,707 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:57:55,708 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:55,710 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 14:57:55,714 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 14:57:55,714 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 14:57:55,717 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 14:57:55,724 [ scc.git] DEBUG Updating 3cd120c..55060a2 2025-08-28 14:57:55,959 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:56,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2025-08-28 14:57:56,460 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2025-08-28 14:57:56,746 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-08-28 14:57:56,746 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2025-08-28 14:57:56,751 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2025-08-28 14:57:57,060 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-08-28 14:57:57,060 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2025-08-28 14:57:57,065 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 14:57:57,065 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:57:57,065 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:57,067 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-08-28 14:57:57,072 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:57,074 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-08-28 14:57:57,087 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2025-08-28 14:57:57,088 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2025-08-28 14:57:57,088 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-08-28 14:57:57,088 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-08-28 14:57:57,088 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-28 14:57:57,088 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-28 14:57:57,091 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2025-08-28 14:57:57,095 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-08-28 14:57:57,098 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:57,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:57:57,309 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-08-28 14:57:57,314 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2025-08-28 14:57:57,318 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#518](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2025-08-28 14:57:57,320 [ scc.config] DEBUG Found github.token 2025-08-28 14:57:57,320 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2025-08-28 14:57:57,320 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2025-08-28 14:57:57,324 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:57,327 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2025-08-28 14:57:57,342 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-08-28 14:57:57,342 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-08-28 14:57:57,342 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2025-08-28 14:57:57,342 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-28 14:57:57,343 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-28 14:57:57,346 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2025-08-28 14:57:57,351 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-08-28 14:57:57,561 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:57,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:57:57,763 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2025-08-28 14:57:57,767 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2025-08-28 14:57:57,770 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#518](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2025-08-28 14:57:57,772 [ scc.config] DEBUG Found github.token 2025-08-28 14:57:57,772 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2025-08-28 14:57:57,772 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 14:57:57,813 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:57:57,813 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:57:57,815 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:57:57,854 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 14:57:57,858 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe59e3c8f10> has no local changes 2025-08-28 14:57:57,858 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/)' 2025-08-28 14:57:57,866 [ scc.git] DEBUG [detached HEAD d64b4c9] merge master -Dorg -Ssuccess-only 2025-08-28 14:57:57,867 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:57:57,867 [ scc.repo] DEBUG ## PRs found: 2025-08-28 14:57:58,015 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:58,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2025-08-28 14:57:58,754 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:59,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2025-08-28 14:57:59,307 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:57:59,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2025-08-28 14:57:59,978 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:00,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:58:00,564 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:00,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:58:01,106 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:01,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2025-08-28 14:58:01,585 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:01,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:58:01,804 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-28 14:58:02,056 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:02,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2025-08-28 14:58:02,375 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-28 14:58:02,627 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:03,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2025-08-28 14:58:03,275 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:03,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:58:03,863 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:04,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:58:04,447 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:04,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2025-08-28 14:58:04,944 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:05,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:58:05,184 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2025-08-28 14:58:05,436 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:05,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2025-08-28 14:58:05,726 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-28 14:58:05,978 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:06,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2025-08-28 14:58:06,686 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:07,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:58:07,261 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:07,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:58:07,905 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:08,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2025-08-28 14:58:08,521 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:08,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:58:08,736 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2025-08-28 14:58:08,988 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:09,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2025-08-28 14:58:09,534 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:09,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2025-08-28 14:58:10,135 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:10,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2025-08-28 14:58:10,653 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:10,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2025-08-28 14:58:11,180 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:11,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2025-08-28 14:58:11,749 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:12,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2025-08-28 14:58:12,303 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:12,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2025-08-28 14:58:12,594 [ scc.repo] DEBUG ## Branches found: 2025-08-28 14:58:12,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-08-28 14:58:12,594 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:12,594 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:12,597 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 14:58:12,600 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 14:58:12,600 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 14:58:12,603 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 14:58:12,606 [ scc.git] DEBUG Already up to date. 2025-08-28 14:58:12,606 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2025-08-28 14:58:12,911 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-08-28 14:58:12,911 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2025-08-28 14:58:12,916 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2025-08-28 14:58:13,240 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-08-28 14:58:13,240 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2025-08-28 14:58:13,245 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2025-08-28 14:58:13,752 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-08-28 14:58:13,752 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2025-08-28 14:58:13,757 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 14:58:13,757 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:13,757 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:13,759 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2025-08-28 14:58:13,762 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:13,764 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2025-08-28 14:58:13,773 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:58:13,776 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2025-08-28 14:58:13,776 [ scc.git] DEBUG package.json | 2 +- 2025-08-28 14:58:13,776 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2025-08-28 14:58:13,779 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:14,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:58:14,011 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2025-08-28 14:58:14,014 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:14,017 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2025-08-28 14:58:14,026 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-28 14:58:14,027 [ scc.git] DEBUG Auto-merging package.json 2025-08-28 14:58:14,027 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:58:14,031 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2025-08-28 14:58:14,031 [ scc.git] DEBUG package.json | 2 +- 2025-08-28 14:58:14,031 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2025-08-28 14:58:14,263 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:14,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:58:14,498 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2025-08-28 14:58:14,501 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:14,503 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2025-08-28 14:58:14,512 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:58:14,515 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-08-28 14:58:14,515 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-28 14:58:14,750 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:14,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:58:14,962 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 14:58:15,006 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:15,006 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:15,008 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:58:15,049 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 14:58:15,053 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe59d24b050> has no local changes 2025-08-28 14:58:15,053 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/)' 2025-08-28 14:58:15,060 [ scc.git] DEBUG [detached HEAD e3c2c82] merge master -Dorg -Ssuccess-only 2025-08-28 14:58:15,060 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:58:15,060 [ scc.repo] DEBUG ## PRs found: 2025-08-28 14:58:15,214 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:15,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 2 2025-08-28 14:58:15,469 [ scc.repo] DEBUG ## Branches found: 2025-08-28 14:58:15,469 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-08-28 14:58:15,469 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:15,470 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:15,472 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 14:58:15,474 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 14:58:15,474 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 14:58:15,477 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 14:58:15,480 [ scc.git] DEBUG Already up to date. 2025-08-28 14:58:15,480 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 14:58:15,480 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:15,480 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:15,483 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 14:58:15,525 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:15,525 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:15,527 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:58:15,569 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 14:58:15,572 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe59d22a850> has no local changes 2025-08-28 14:58:15,572 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Generated by OMERO-plugins-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/)' 2025-08-28 14:58:15,578 [ scc.git] DEBUG [detached HEAD 32e0f2a] merge master -Dorg -Ssuccess-only 2025-08-28 14:58:15,579 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:58:15,579 [ scc.repo] DEBUG ## PRs found: 2025-08-28 14:58:15,722 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:16,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2025-08-28 14:58:16,349 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:16,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None 2025-08-28 14:58:16,948 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:17,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None 2025-08-28 14:58:17,493 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:17,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-08-28 14:58:18,092 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:18,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:58:18,658 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:18,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:58:19,195 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:19,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-08-28 14:58:19,796 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:20,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None 2025-08-28 14:58:20,302 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:20,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-08-28 14:58:20,892 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:21,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None 2025-08-28 14:58:21,129 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions' 2025-08-28 14:58:21,381 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:21,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2025-08-28 14:58:21,681 [ scc.repo] DEBUG ## Branches found: 2025-08-28 14:58:21,681 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-08-28 14:58:21,681 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:21,681 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:21,684 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 14:58:21,686 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 14:58:21,686 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 14:58:21,689 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 14:58:21,692 [ scc.git] DEBUG Already up to date. 2025-08-28 14:58:21,692 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head' 2025-08-28 14:58:22,160 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2025-08-28 14:58:22,161 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD 2025-08-28 14:58:22,165 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 14:58:22,165 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:22,165 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:22,167 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3' 2025-08-28 14:58:22,171 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:22,173 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3' 2025-08-28 14:58:22,181 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:58:22,184 [ scc.git] DEBUG setup.py | 4 +- 2025-08-28 14:58:22,184 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 + 2025-08-28 14:58:22,184 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++-- 2025-08-28 14:58:22,184 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-) 2025-08-28 14:58:22,187 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:22,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:58:22,419 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 14:58:22,461 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:22,461 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:22,463 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:58:22,504 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 14:58:22,508 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe59d243b90> has no local changes 2025-08-28 14:58:22,508 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' Generated by OMERO-plugins-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/)' 2025-08-28 14:58:22,514 [ scc.git] DEBUG [detached HEAD 74efe32] merge master -Dorg -Ssuccess-only 2025-08-28 14:58:22,515 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:58:22,515 [ scc.repo] DEBUG ## PRs found: 2025-08-28 14:58:22,671 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:23,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2025-08-28 14:58:23,263 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:23,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2025-08-28 14:58:23,800 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:24,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2025-08-28 14:58:24,301 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:24,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-08-28 14:58:24,935 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:25,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:58:25,482 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:25,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-08-28 14:58:26,080 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:26,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:58:26,326 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2025-08-28 14:58:26,326 [ scc.repo] DEBUG ## Branches found: 2025-08-28 14:58:26,327 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-08-28 14:58:26,327 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:26,327 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:26,330 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 14:58:26,332 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 14:58:26,332 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 14:58:26,335 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 14:58:26,338 [ scc.git] DEBUG Already up to date. 2025-08-28 14:58:26,338 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2025-08-28 14:58:26,641 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2025-08-28 14:58:26,641 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2025-08-28 14:58:26,646 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 14:58:26,646 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:26,646 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:26,648 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-08-28 14:58:26,651 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:26,654 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-08-28 14:58:26,663 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2025-08-28 14:58:26,663 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2025-08-28 14:58:26,663 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2025-08-28 14:58:26,663 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2025-08-28 14:58:26,663 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2025-08-28 14:58:26,663 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2025-08-28 14:58:26,663 [ scc.git] DEBUG Auto-merging setup.py 2025-08-28 14:58:26,663 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2025-08-28 14:58:26,663 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-28 14:58:26,664 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-28 14:58:26,666 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2025-08-28 14:58:26,671 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2025-08-28 14:58:26,674 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:27,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:58:27,606 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-08-28 14:58:27,610 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2025-08-28 14:58:27,613 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#518](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/urls.py - omero_signup/views.py - setup.py --conflicts 2025-08-28 14:58:27,615 [ scc.config] DEBUG Found github.token 2025-08-28 14:58:27,615 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2025-08-28 14:58:27,616 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 14:58:27,658 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:27,658 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:27,660 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:58:27,700 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 14:58:27,703 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe59d21ef90> has no local changes 2025-08-28 14:58:27,704 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/)' 2025-08-28 14:58:27,710 [ scc.git] DEBUG [detached HEAD 7a4aaec] merge master -Dorg -Ssuccess-only 2025-08-28 14:58:27,710 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:58:27,710 [ scc.repo] DEBUG ## PRs found: 2025-08-28 14:58:27,858 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:28,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2025-08-28 14:58:28,462 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:28,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/76 HTTP/1.1" 200 None 2025-08-28 14:58:28,983 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:29,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None 2025-08-28 14:58:29,579 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:29,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:58:30,148 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:30,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:58:30,676 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:31,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None 2025-08-28 14:58:31,267 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:31,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:58:31,588 [ scc.repo] DEBUG - PR 76 will-moore 'Run cli deps' 2025-08-28 14:58:31,840 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:32,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2025-08-28 14:58:32,421 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:32,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2025-08-28 14:58:32,997 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:33,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2025-08-28 14:58:33,572 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:33,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:58:34,099 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:34,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:58:34,669 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:34,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None 2025-08-28 14:58:35,235 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:35,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None 2025-08-28 14:58:35,755 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:36,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2025-08-28 14:58:36,306 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:36,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2025-08-28 14:58:36,816 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:37,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-08-28 14:58:37,396 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:37,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:58:37,931 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:38,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-08-28 14:58:38,518 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:38,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:58:38,749 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-08-28 14:58:38,749 [ scc.repo] DEBUG ## Branches found: 2025-08-28 14:58:38,749 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-08-28 14:58:38,749 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:38,749 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:38,752 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 14:58:38,755 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 14:58:38,755 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 14:58:38,758 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 14:58:38,761 [ scc.git] DEBUG Already up to date. 2025-08-28 14:58:38,761 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2025-08-28 14:58:39,147 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-08-28 14:58:39,147 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2025-08-28 14:58:39,151 [ scc.git] DEBUG Calling 'git fetch origin pull/76/head' 2025-08-28 14:58:39,464 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-08-28 14:58:39,465 [ scc.git] DEBUG * branch refs/pull/76/head -> FETCH_HEAD 2025-08-28 14:58:39,469 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 14:58:39,469 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:39,469 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:39,472 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2025-08-28 14:58:39,476 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:39,478 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2025-08-28 14:58:39,491 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:58:39,495 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2025-08-28 14:58:39,495 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2025-08-28 14:58:39,495 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2025-08-28 14:58:39,495 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2025-08-28 14:58:39,495 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2025-08-28 14:58:39,495 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2025-08-28 14:58:39,495 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2025-08-28 14:58:39,497 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2025-08-28 14:58:39,497 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2025-08-28 14:58:39,497 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2025-08-28 14:58:39,498 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:39,498 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2025-08-28 14:58:39,498 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2025-08-28 14:58:39,498 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2025-08-28 14:58:39,498 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2025-08-28 14:58:39,498 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2025-08-28 14:58:39,498 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2025-08-28 14:58:39,498 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2025-08-28 14:58:39,498 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2025-08-28 14:58:39,498 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2025-08-28 14:58:39,498 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2025-08-28 14:58:39,498 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2025-08-28 14:58:39,498 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2025-08-28 14:58:39,498 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2025-08-28 14:58:39,498 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2025-08-28 14:58:39,498 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2025-08-28 14:58:39,498 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2025-08-28 14:58:39,498 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2025-08-28 14:58:39,498 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2025-08-28 14:58:39,498 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2025-08-28 14:58:39,498 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2025-08-28 14:58:39,498 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2025-08-28 14:58:39,498 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2025-08-28 14:58:39,498 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2025-08-28 14:58:39,498 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2025-08-28 14:58:39,499 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2025-08-28 14:58:39,499 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2025-08-28 14:58:39,499 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2025-08-28 14:58:39,499 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2025-08-28 14:58:39,499 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2025-08-28 14:58:39,499 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2025-08-28 14:58:39,499 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2025-08-28 14:58:39,499 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2025-08-28 14:58:39,499 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2025-08-28 14:58:39,499 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2025-08-28 14:58:39,499 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2025-08-28 14:58:39,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:58:39,694 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6' 2025-08-28 14:58:39,699 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:39,701 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 76 (Run cli deps) bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6' 2025-08-28 14:58:39,711 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:58:39,714 [ scc.git] DEBUG docker | 1 + 2025-08-28 14:58:39,714 [ scc.git] DEBUG 1 file changed, 1 insertion(+) 2025-08-28 14:58:39,946 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:40,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:58:40,151 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 14:58:40,192 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:40,192 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:40,194 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:58:40,234 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 14:58:40,238 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe59e454450> has no local changes 2025-08-28 14:58:40,238 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' - PR 76 will-moore 'Run cli deps' Generated by OMERO-plugins-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/)' 2025-08-28 14:58:40,244 [ scc.git] DEBUG [detached HEAD 6aed1c1] merge master -Dorg -Ssuccess-only 2025-08-28 14:58:40,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:58:40,244 [ scc.repo] DEBUG ## PRs found: 2025-08-28 14:58:40,403 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:40,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2025-08-28 14:58:40,630 [ scc.repo] DEBUG ## Branches found: 2025-08-28 14:58:40,631 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-08-28 14:58:40,631 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:40,631 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:40,633 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 14:58:40,635 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 14:58:40,635 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 14:58:40,638 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 14:58:40,641 [ scc.git] DEBUG Already up to date. 2025-08-28 14:58:40,641 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 14:58:40,641 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:40,641 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:40,643 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 14:58:40,683 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:40,683 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:40,686 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:58:40,724 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 14:58:40,727 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe59eb6b610> has no local changes 2025-08-28 14:58:40,727 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/)' 2025-08-28 14:58:40,734 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:58:40,734 [ scc.repo] DEBUG ## PRs found: 2025-08-28 14:58:40,734 [ scc.git] DEBUG [detached HEAD ff040f5] merge master -Dorg -Ssuccess-only 2025-08-28 14:58:40,883 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:41,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2025-08-28 14:58:41,121 [ scc.repo] DEBUG ## Branches found: 2025-08-28 14:58:41,121 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-08-28 14:58:41,121 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:41,121 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:41,124 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 14:58:41,126 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 14:58:41,127 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 14:58:41,129 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 14:58:41,137 [ scc.git] DEBUG Updating deab817..160d894 2025-08-28 14:58:41,373 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:41,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2025-08-28 14:58:41,855 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 14:58:41,855 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:41,855 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:41,858 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 14:58:41,898 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:41,898 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:41,900 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:58:41,940 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 14:58:41,943 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe59d2a2190> has no local changes 2025-08-28 14:58:41,944 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Generated by OMERO-plugins-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/)' 2025-08-28 14:58:41,950 [ scc.git] DEBUG [detached HEAD 4a5e54f] merge master -Dorg -Ssuccess-only 2025-08-28 14:58:41,950 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:58:41,950 [ scc.git] INFO Overriding base-branch from master to main 2025-08-28 14:58:41,950 [ scc.repo] DEBUG ## PRs found: 2025-08-28 14:58:42,107 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:42,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2025-08-28 14:58:42,692 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:43,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2025-08-28 14:58:43,293 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:43,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/5934b1d040b20e93fd532ce2ba55e2d6fd5da3a2 HTTP/1.1" 200 None 2025-08-28 14:58:43,852 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:44,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/5934b1d040b20e93fd532ce2ba55e2d6fd5da3a2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:58:45,182 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:45,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/5934b1d040b20e93fd532ce2ba55e2d6fd5da3a2/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:58:45,725 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:46,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/5934b1d040b20e93fd532ce2ba55e2d6fd5da3a2 HTTP/1.1" 200 None 2025-08-28 14:58:46,315 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:46,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/5934b1d040b20e93fd532ce2ba55e2d6fd5da3a2?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:58:46,552 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2025-08-28 14:58:46,804 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:47,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/20 HTTP/1.1" 200 None 2025-08-28 14:58:47,341 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:47,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/20/comments HTTP/1.1" 200 None 2025-08-28 14:58:47,841 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:48,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/76b47bafa934219c6487579e3df167219ea56fec HTTP/1.1" 200 None 2025-08-28 14:58:48,418 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:48,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/76b47bafa934219c6487579e3df167219ea56fec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:58:48,959 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:49,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/76b47bafa934219c6487579e3df167219ea56fec/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:58:49,485 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:49,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/76b47bafa934219c6487579e3df167219ea56fec HTTP/1.1" 200 None 2025-08-28 14:58:50,053 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:50,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/76b47bafa934219c6487579e3df167219ea56fec?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:58:50,305 [ scc.repo] DEBUG - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2025-08-28 14:58:50,557 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:50,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None 2025-08-28 14:58:51,069 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:51,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None 2025-08-28 14:58:51,604 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:51,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None 2025-08-28 14:58:52,177 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:52,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:58:52,677 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:53,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:58:53,258 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:53,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2025-08-28 14:58:53,806 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:54,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2025-08-28 14:58:54,365 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:54,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2025-08-28 14:58:54,881 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:55,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-08-28 14:58:55,551 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:55,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:58:56,135 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:56,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-08-28 14:58:56,727 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:57,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:58:57,030 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-08-28 14:58:57,030 [ scc.repo] DEBUG ## Branches found: 2025-08-28 14:58:57,030 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-08-28 14:58:57,030 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:57,031 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:57,033 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2025-08-28 14:58:57,036 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 14:58:57,036 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2025-08-28 14:58:57,039 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2025-08-28 14:58:57,042 [ scc.git] DEBUG Already up to date. 2025-08-28 14:58:57,042 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2025-08-28 14:58:57,332 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-08-28 14:58:57,332 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2025-08-28 14:58:57,337 [ scc.git] DEBUG Calling 'git fetch origin pull/20/head' 2025-08-28 14:58:57,742 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-08-28 14:58:57,742 [ scc.git] DEBUG * branch refs/pull/20/head -> FETCH_HEAD 2025-08-28 14:58:57,746 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2025-08-28 14:58:58,247 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-08-28 14:58:58,247 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2025-08-28 14:58:58,250 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 14:58:58,250 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:58,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:58,252 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-08-28 14:58:58,255 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:58,258 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-08-28 14:58:58,265 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2025-08-28 14:58:58,265 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2025-08-28 14:58:58,266 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-28 14:58:58,266 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-28 14:58:58,269 [ scc.git] DEBUG Calling 'git reset --hard 8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2025-08-28 14:58:58,273 [ scc.git] DEBUG HEAD is now at 8f3c313 Merge pull request #17 from jburel/build 2025-08-28 14:58:58,275 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:58,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:58:58,478 [ scc.git] DEBUG Calling 'git merge-base 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-08-28 14:58:58,481 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2025-08-28 14:58:58,483 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#518](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2025-08-28 14:58:58,486 [ scc.config] DEBUG Found github.token 2025-08-28 14:58:58,486 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2025-08-28 14:58:58,486 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...76b47bafa934219c6487579e3df167219ea56fec' 2025-08-28 14:58:58,489 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:58,491 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 20 (Use zarr_format=2 for .zarray and chunk endpoints) 76b47bafa934219c6487579e3df167219ea56fec' 2025-08-28 14:58:58,499 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:58:58,502 [ scc.git] DEBUG omero_web_zarr/views.py | 3 ++- 2025-08-28 14:58:58,502 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 1 deletion(-) 2025-08-28 14:58:58,729 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:58,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:58:58,958 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5934b1d040b20e93fd532ce2ba55e2d6fd5da3a2' 2025-08-28 14:58:58,961 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:58,963 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) 5934b1d040b20e93fd532ce2ba55e2d6fd5da3a2' 2025-08-28 14:58:58,973 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2025-08-28 14:58:58,974 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:58:58,977 [ scc.git] DEBUG README.rst | 3 + 2025-08-28 14:58:58,977 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 299 +++++++++++++++++++++ 2025-08-28 14:58:58,977 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2025-08-28 14:58:58,977 [ scc.git] DEBUG omero_web_zarr/views.py | 41 ++- 2025-08-28 14:58:58,977 [ scc.git] DEBUG setup.py | 5 +- 2025-08-28 14:58:58,977 [ scc.git] DEBUG 5 files changed, 348 insertions(+), 2 deletions(-) 2025-08-28 14:58:58,977 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2025-08-28 14:58:59,210 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:59,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:58:59,448 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 14:58:59,490 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:59,490 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:59,492 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:58:59,532 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 14:58:59,536 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe59d26fad0> has no local changes 2025-08-28 14:58:59,536 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Merged PRs: - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/)' 2025-08-28 14:58:59,542 [ scc.git] DEBUG [detached HEAD 9cfa8a3] merge master -Dorg -Ssuccess-only 2025-08-28 14:58:59,542 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:58:59,542 [ scc.repo] DEBUG ## PRs found: 2025-08-28 14:58:59,700 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:58:59,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2025-08-28 14:58:59,920 [ scc.repo] DEBUG ## Branches found: 2025-08-28 14:58:59,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-08-28 14:58:59,920 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:59,920 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:59,922 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 14:58:59,925 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 14:58:59,925 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 14:58:59,928 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 14:58:59,931 [ scc.git] DEBUG Already up to date. 2025-08-28 14:58:59,931 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 14:58:59,931 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:59,931 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:59,933 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 14:58:59,973 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:58:59,974 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:58:59,976 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:59:00,014 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 14:59:00,018 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe59e441ad0> has no local changes 2025-08-28 14:59:00,018 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/)' 2025-08-28 14:59:00,024 [ scc.git] DEBUG [detached HEAD 9faeb82] merge master -Dorg -Ssuccess-only 2025-08-28 14:59:00,024 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:59:00,024 [ scc.repo] DEBUG ## PRs found: 2025-08-28 14:59:00,172 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:00,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2025-08-28 14:59:00,512 [ scc.repo] DEBUG ## Branches found: 2025-08-28 14:59:00,512 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-08-28 14:59:00,512 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:59:00,512 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:59:00,515 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 14:59:00,517 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 14:59:00,517 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 14:59:00,520 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 14:59:00,523 [ scc.git] DEBUG Already up to date. 2025-08-28 14:59:00,523 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 14:59:00,523 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:59:00,523 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:59:00,525 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 14:59:00,565 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:59:00,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:59:00,567 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:59:00,606 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 14:59:00,610 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe59d23b590> has no local changes 2025-08-28 14:59:00,610 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/)' 2025-08-28 14:59:00,616 [ scc.git] DEBUG [detached HEAD 47b540e] merge master -Dorg -Ssuccess-only 2025-08-28 14:59:00,617 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:59:00,617 [ scc.repo] DEBUG ## PRs found: 2025-08-28 14:59:00,764 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:01,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2025-08-28 14:59:01,412 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:01,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2025-08-28 14:59:01,967 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:02,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2025-08-28 14:59:02,533 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:02,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-08-28 14:59:03,081 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:05,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:59:05,560 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:05,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-08-28 14:59:06,032 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:06,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:59:06,255 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2025-08-28 14:59:06,255 [ scc.repo] DEBUG ## Branches found: 2025-08-28 14:59:06,255 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-08-28 14:59:06,256 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:59:06,256 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:59:06,258 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 14:59:06,261 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 14:59:06,261 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 14:59:06,264 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 14:59:06,267 [ scc.git] DEBUG Already up to date. 2025-08-28 14:59:06,267 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2025-08-28 14:59:06,582 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2025-08-28 14:59:06,582 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2025-08-28 14:59:06,586 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 14:59:06,586 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:59:06,586 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:59:06,588 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-08-28 14:59:06,591 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:59:06,594 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-08-28 14:59:06,602 [ scc.git] DEBUG Auto-merging Dockerfile 2025-08-28 14:59:06,602 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2025-08-28 14:59:06,603 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-28 14:59:06,603 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-28 14:59:06,606 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-08-28 14:59:06,611 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-08-28 14:59:06,613 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:07,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:59:07,004 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-08-28 14:59:07,007 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-08-28 14:59:07,010 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#518](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2025-08-28 14:59:07,012 [ scc.config] DEBUG Found github.token 2025-08-28 14:59:07,012 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2025-08-28 14:59:07,012 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 14:59:07,053 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:59:07,053 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:59:07,055 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:59:07,096 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 14:59:07,100 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe59d2db5d0> has no local changes 2025-08-28 14:59:07,100 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/)' 2025-08-28 14:59:07,106 [ scc.git] DEBUG [detached HEAD 229fedd] merge master -Dorg -Ssuccess-only 2025-08-28 14:59:07,106 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:59:07,107 [ scc.git] INFO Overriding base-branch from master to develop 2025-08-28 14:59:07,107 [ scc.repo] DEBUG ## PRs found: 2025-08-28 14:59:07,257 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:07,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-08-28 14:59:08,088 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:08,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-08-28 14:59:08,690 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:08,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-08-28 14:59:09,198 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:09,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-08-28 14:59:09,788 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:10,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:59:10,382 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:10,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 14:59:10,991 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:11,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-08-28 14:59:11,564 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:11,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:59:11,804 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-08-28 14:59:12,056 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:12,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-08-28 14:59:12,594 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:12,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-08-28 14:59:13,137 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:13,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-08-28 14:59:13,731 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:14,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 14:59:14,263 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:14,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-08-28 14:59:15,061 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:15,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-08-28 14:59:15,292 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-08-28 14:59:15,544 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:15,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-08-28 14:59:16,105 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:16,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-08-28 14:59:16,676 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:16,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-08-28 14:59:17,214 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:17,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-08-28 14:59:17,555 [ scc.repo] DEBUG ## Branches found: 2025-08-28 14:59:17,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-08-28 14:59:17,555 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:59:17,555 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:59:17,558 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-08-28 14:59:17,561 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 14:59:17,561 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-08-28 14:59:17,564 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-08-28 14:59:17,574 [ scc.git] DEBUG Updating 4b4c755..573db34 2025-08-28 14:59:17,806 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:18,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2025-08-28 14:59:18,558 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:19,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2025-08-28 14:59:19,388 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-08-28 14:59:19,723 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-08-28 14:59:19,723 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-08-28 14:59:19,727 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-08-28 14:59:20,025 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-08-28 14:59:20,025 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-08-28 14:59:20,029 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 14:59:20,030 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:59:20,030 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:59:20,032 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-28 14:59:20,038 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:59:20,040 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-28 14:59:20,051 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-08-28 14:59:20,052 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-28 14:59:20,052 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-28 14:59:20,054 [ scc.git] DEBUG Calling 'git reset --hard 573db340d5d1429fa17c7e486206948412a7c150' 2025-08-28 14:59:20,058 [ scc.git] DEBUG HEAD is now at 573db34 Bump version: 5.9.1 → 5.9.2.dev0 2025-08-28 14:59:20,061 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:20,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:59:20,291 [ scc.git] DEBUG Calling 'git merge-base 573db340d5d1429fa17c7e486206948412a7c150 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-28 14:59:20,297 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..573db340d5d1429fa17c7e486206948412a7c150' 2025-08-28 14:59:20,301 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#518](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-08-28 14:59:20,303 [ scc.config] DEBUG Found github.token 2025-08-28 14:59:20,303 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-08-28 14:59:20,304 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-08-28 14:59:20,308 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:59:20,311 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-08-28 14:59:20,320 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 14:59:20,323 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-08-28 14:59:20,323 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-08-28 14:59:20,543 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:20,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:59:20,792 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 14:59:20,833 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 14:59:20,834 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 14:59:20,836 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:59:20,875 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 14:59:20,879 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe59d2d8e10> has no local changes 2025-08-28 14:59:20,879 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Updating 4b4c755..573db34 Previously merged: - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/)' 2025-08-28 14:59:20,889 [ scc.git] DEBUG [detached HEAD 25b4a8a] merge master -Dorg -Ssuccess-only 2025-08-28 14:59:20,890 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:59:20,890 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 14:59:20,969 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2025-08-28 14:59:21,045 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:21,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:59:21,308 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2025-08-28 14:59:21,310 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2025-08-28 14:59:21,555 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:21,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:59:21,790 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2025-08-28 14:59:21,792 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2025-08-28 14:59:22,037 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:22,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:59:22,290 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2025-08-28 14:59:22,292 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2025-08-28 14:59:22,537 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:22,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:59:22,760 [ scc.config] DEBUG Found submodule.omero-figure.url 2025-08-28 14:59:23,005 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:23,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:59:23,208 [ scc.config] DEBUG Found submodule.omero-figure.branch 2025-08-28 14:59:23,210 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2025-08-28 14:59:23,455 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:23,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:59:23,660 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2025-08-28 14:59:23,662 [ scc.config] DEBUG Found submodule.omero-gallery.url 2025-08-28 14:59:23,907 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:24,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:59:24,124 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2025-08-28 14:59:24,126 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2025-08-28 14:59:24,372 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:24,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:59:24,594 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2025-08-28 14:59:24,596 [ scc.config] DEBUG Found submodule.omero-mapr.url 2025-08-28 14:59:24,841 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:25,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:59:25,071 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2025-08-28 14:59:25,073 [ scc.config] DEBUG Found submodule.omero-metadata.url 2025-08-28 14:59:25,318 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:25,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:59:25,535 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2025-08-28 14:59:25,537 [ scc.config] DEBUG Found submodule.omero-parade.url 2025-08-28 14:59:25,782 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:25,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:59:25,999 [ scc.config] DEBUG Found submodule.omero-parade.branch 2025-08-28 14:59:26,001 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2025-08-28 14:59:26,247 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:26,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:59:26,471 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2025-08-28 14:59:26,473 [ scc.config] DEBUG Found submodule.omero-rois.url 2025-08-28 14:59:26,718 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:26,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:59:26,922 [ scc.config] DEBUG Found submodule.omero-signup.url 2025-08-28 14:59:27,167 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:27,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:59:27,370 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2025-08-28 14:59:27,615 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:27,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:59:27,854 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2025-08-28 14:59:27,856 [ scc.config] DEBUG Found submodule.omero-upload.url 2025-08-28 14:59:28,101 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:28,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:59:28,310 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2025-08-28 14:59:28,555 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:28,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:59:28,802 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2025-08-28 14:59:29,047 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:29,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:59:29,260 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2025-08-28 14:59:29,262 [ scc.config] DEBUG Found submodule.omero-weberror.url 2025-08-28 14:59:29,508 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:29,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:59:29,735 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2025-08-28 14:59:29,737 [ scc.config] DEBUG Found submodule.omero-webtest.url 2025-08-28 14:59:29,982 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:30,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:59:30,187 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2025-08-28 14:59:30,189 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2025-08-28 14:59:30,434 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:30,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:59:30,648 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2025-08-28 14:59:30,649 [ scc.config] DEBUG Found submodule.scripts.url 2025-08-28 14:59:30,895 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 14:59:31,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 14:59:31,106 [ scc.config] DEBUG Found submodule.scripts.branch 2025-08-28 14:59:31,106 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 14:59:31,194 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe59e427a90> has local changes 2025-08-28 14:59:31,194 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Repository: ome/omero-cli-render Excluded PRs: - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 69 dominikl 'Fix help text for impo/export commands' - PR 71 dominikl 'Escape slash character in image names' Repository: ome/omero-cli-zarr Excluded PRs: - PR 174 will-moore 'Skip wells' (stage: draft) - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..f7eea7c Previously merged: - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 180 will-moore 'Register command' Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) - PR 619 will-moore 'OME-Zarr support' (stage: draft) - PR 543 will-moore 'Plate well labels' (exclude comment) Updating 9cc36cde..d2c6f5bc Previously merged: - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 600 Rdornier 'Label on rois' - PR 605 Tom-TBT 'Colorbar feature' - PR 610 will-moore 'Add docs/contributing.rst' - PR 612 will-moore 'Script version' - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7' Conflicting PRs (not included): - PR 616 Rdornier 'Fix labels around border' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 637 Rdornier 'Fix scalebar position' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..bb94cf8 Previously merged: - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' - PR 76 will-moore 'Run cli deps' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Merged PRs: - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Updating 4b4c755..573db34 Previously merged: - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/518/)' 2025-08-28 14:59:31,207 [ scc.git] DEBUG [detached HEAD d6a0796] merge master -Dorg -Ssuccess-only 2025-08-28 14:59:31,207 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2025-08-28 14:59:31,208 [ scc.merge] INFO Repository: ome/omero-plugins 2025-08-28 14:59:31,208 [ scc.merge] INFO Already up to date. 2025-08-28 14:59:31,208 [ scc.merge] INFO 2025-08-28 14:59:31,208 [ scc.merge] INFO Merged PRs: 2025-08-28 14:59:31,208 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-08-28 14:59:31,208 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-08-28 14:59:31,208 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-08-28 14:59:31,208 [ scc.merge] INFO 2025-08-28 14:59:31,208 [ scc.merge] INFO Repository: ome/minimal-omero-client 2025-08-28 14:59:31,208 [ scc.merge] INFO Already up to date. 2025-08-28 14:59:31,208 [ scc.merge] INFO 2025-08-28 14:59:31,208 [ scc.merge] INFO 2025-08-28 14:59:31,208 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2025-08-28 14:59:31,208 [ scc.merge] INFO Excluded PRs: 2025-08-28 14:59:31,208 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2025-08-28 14:59:31,208 [ scc.merge] INFO Already up to date. 2025-08-28 14:59:31,208 [ scc.merge] INFO 2025-08-28 14:59:31,208 [ scc.merge] INFO 2025-08-28 14:59:31,208 [ scc.merge] INFO Repository: ome/omero-cli-render 2025-08-28 14:59:31,208 [ scc.merge] INFO Excluded PRs: 2025-08-28 14:59:31,208 [ scc.merge] INFO - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) 2025-08-28 14:59:31,208 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2025-08-28 14:59:31,208 [ scc.merge] INFO Already up to date. 2025-08-28 14:59:31,208 [ scc.merge] INFO 2025-08-28 14:59:31,208 [ scc.merge] INFO Merged PRs: 2025-08-28 14:59:31,208 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2025-08-28 14:59:31,209 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2025-08-28 14:59:31,209 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2025-08-28 14:59:31,209 [ scc.merge] INFO 2025-08-28 14:59:31,209 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2025-08-28 14:59:31,209 [ scc.merge] INFO Excluded PRs: 2025-08-28 14:59:31,209 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' (stage: draft) 2025-08-28 14:59:31,209 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (exclude comment) 2025-08-28 14:59:31,209 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2025-08-28 14:59:31,209 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) 2025-08-28 14:59:31,209 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2025-08-28 14:59:31,209 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2025-08-28 14:59:31,209 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-08-28 14:59:31,209 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2025-08-28 14:59:31,209 [ scc.merge] INFO Updating 11d3587..f7eea7c 2025-08-28 14:59:31,209 [ scc.merge] INFO Previously merged: 2025-08-28 14:59:31,209 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2025-08-28 14:59:31,209 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2025-08-28 14:59:31,209 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2025-08-28 14:59:31,209 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2025-08-28 14:59:31,209 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2025-08-28 14:59:31,209 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2025-08-28 14:59:31,209 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-28 14:59:31,209 [ scc.merge] INFO 2025-08-28 14:59:31,209 [ scc.merge] INFO Merged PRs: 2025-08-28 14:59:31,209 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2025-08-28 14:59:31,209 [ scc.merge] INFO - PR 180 will-moore 'Register command' 2025-08-28 14:59:31,209 [ scc.merge] INFO 2025-08-28 14:59:31,209 [ scc.merge] INFO Repository: ome/omero-figure 2025-08-28 14:59:31,209 [ scc.merge] INFO Excluded PRs: 2025-08-28 14:59:31,209 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) 2025-08-28 14:59:31,209 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft) 2025-08-28 14:59:31,209 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2025-08-28 14:59:31,209 [ scc.merge] INFO Updating 9cc36cde..d2c6f5bc 2025-08-28 14:59:31,209 [ scc.merge] INFO Previously merged: 2025-08-28 14:59:31,209 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2025-08-28 14:59:31,209 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2025-08-28 14:59:31,209 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2025-08-28 14:59:31,209 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2025-08-28 14:59:31,210 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-28 14:59:31,210 [ scc.merge] INFO 2025-08-28 14:59:31,210 [ scc.merge] INFO Merged PRs: 2025-08-28 14:59:31,210 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2025-08-28 14:59:31,210 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2025-08-28 14:59:31,210 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2025-08-28 14:59:31,210 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2025-08-28 14:59:31,210 [ scc.merge] INFO - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7' 2025-08-28 14:59:31,210 [ scc.merge] INFO 2025-08-28 14:59:31,210 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-28 14:59:31,210 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2025-08-28 14:59:31,210 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2025-08-28 14:59:31,210 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2025-08-28 14:59:31,210 [ scc.merge] INFO 2025-08-28 14:59:31,210 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2025-08-28 14:59:31,210 [ scc.merge] INFO Already up to date. 2025-08-28 14:59:31,210 [ scc.merge] INFO 2025-08-28 14:59:31,210 [ scc.merge] INFO Merged PRs: 2025-08-28 14:59:31,210 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2025-08-28 14:59:31,210 [ scc.merge] INFO 2025-08-28 14:59:31,210 [ scc.merge] INFO Repository: ome/omero-gallery 2025-08-28 14:59:31,210 [ scc.merge] INFO Already up to date. 2025-08-28 14:59:31,210 [ scc.merge] INFO 2025-08-28 14:59:31,210 [ scc.merge] INFO Merged PRs: 2025-08-28 14:59:31,210 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-08-28 14:59:31,210 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-08-28 14:59:31,210 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-08-28 14:59:31,210 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-08-28 14:59:31,210 [ scc.merge] INFO 2025-08-28 14:59:31,210 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-28 14:59:31,210 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-08-28 14:59:31,210 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-08-28 14:59:31,210 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2025-08-28 14:59:31,210 [ scc.merge] INFO 2025-08-28 14:59:31,210 [ scc.merge] INFO Repository: ome/omero-iviewer 2025-08-28 14:59:31,210 [ scc.merge] INFO Excluded PRs: 2025-08-28 14:59:31,210 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft) 2025-08-28 14:59:31,210 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2025-08-28 14:59:31,211 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2025-08-28 14:59:31,211 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2025-08-28 14:59:31,211 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure) 2025-08-28 14:59:31,211 [ scc.merge] INFO Updating 7a798ce..bb94cf8 2025-08-28 14:59:31,211 [ scc.merge] INFO Previously merged: 2025-08-28 14:59:31,211 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-28 14:59:31,211 [ scc.merge] INFO 2025-08-28 14:59:31,211 [ scc.merge] INFO Merged PRs: 2025-08-28 14:59:31,211 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2025-08-28 14:59:31,211 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2025-08-28 14:59:31,211 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2025-08-28 14:59:31,211 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-08-28 14:59:31,211 [ scc.merge] INFO 2025-08-28 14:59:31,211 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-28 14:59:31,211 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2025-08-28 14:59:31,211 [ scc.merge] INFO 2025-08-28 14:59:31,211 [ scc.merge] INFO Repository: ome/omero-mapr 2025-08-28 14:59:31,211 [ scc.merge] INFO Excluded PRs: 2025-08-28 14:59:31,211 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2025-08-28 14:59:31,211 [ scc.merge] INFO Already up to date. 2025-08-28 14:59:31,211 [ scc.merge] INFO 2025-08-28 14:59:31,211 [ scc.merge] INFO Merged PRs: 2025-08-28 14:59:31,211 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2025-08-28 14:59:31,211 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-28 14:59:31,211 [ scc.merge] INFO 2025-08-28 14:59:31,211 [ scc.merge] INFO Repository: ome/omero-metadata 2025-08-28 14:59:31,211 [ scc.merge] INFO Updating 3cd120c..55060a2 2025-08-28 14:59:31,211 [ scc.merge] INFO Previously merged: 2025-08-28 14:59:31,211 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-28 14:59:31,211 [ scc.merge] INFO 2025-08-28 14:59:31,211 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-28 14:59:31,211 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-08-28 14:59:31,211 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-08-28 14:59:31,211 [ scc.merge] INFO 2025-08-28 14:59:31,211 [ scc.merge] INFO Repository: ome/omero-parade 2025-08-28 14:59:31,211 [ scc.merge] INFO Excluded PRs: 2025-08-28 14:59:31,211 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2025-08-28 14:59:31,211 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2025-08-28 14:59:31,211 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2025-08-28 14:59:31,212 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2025-08-28 14:59:31,212 [ scc.merge] INFO Already up to date. 2025-08-28 14:59:31,212 [ scc.merge] INFO 2025-08-28 14:59:31,212 [ scc.merge] INFO Merged PRs: 2025-08-28 14:59:31,212 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2025-08-28 14:59:31,212 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2025-08-28 14:59:31,212 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-28 14:59:31,212 [ scc.merge] INFO 2025-08-28 14:59:31,212 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2025-08-28 14:59:31,212 [ scc.merge] INFO Already up to date. 2025-08-28 14:59:31,212 [ scc.merge] INFO 2025-08-28 14:59:31,212 [ scc.merge] INFO 2025-08-28 14:59:31,212 [ scc.merge] INFO Repository: ome/omero-rois 2025-08-28 14:59:31,212 [ scc.merge] INFO Excluded PRs: 2025-08-28 14:59:31,212 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-08-28 14:59:31,212 [ scc.merge] INFO Already up to date. 2025-08-28 14:59:31,212 [ scc.merge] INFO 2025-08-28 14:59:31,212 [ scc.merge] INFO Merged PRs: 2025-08-28 14:59:31,212 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions' 2025-08-28 14:59:31,212 [ scc.merge] INFO 2025-08-28 14:59:31,212 [ scc.merge] INFO Repository: ome/omero-signup 2025-08-28 14:59:31,212 [ scc.merge] INFO Already up to date. 2025-08-28 14:59:31,212 [ scc.merge] INFO 2025-08-28 14:59:31,212 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-28 14:59:31,212 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2025-08-28 14:59:31,212 [ scc.merge] INFO 2025-08-28 14:59:31,212 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2025-08-28 14:59:31,212 [ scc.merge] INFO Excluded PRs: 2025-08-28 14:59:31,212 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2025-08-28 14:59:31,212 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2025-08-28 14:59:31,212 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) 2025-08-28 14:59:31,212 [ scc.merge] INFO Already up to date. 2025-08-28 14:59:31,212 [ scc.merge] INFO 2025-08-28 14:59:31,212 [ scc.merge] INFO Merged PRs: 2025-08-28 14:59:31,212 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-08-28 14:59:31,212 [ scc.merge] INFO - PR 76 will-moore 'Run cli deps' 2025-08-28 14:59:31,212 [ scc.merge] INFO 2025-08-28 14:59:31,212 [ scc.merge] INFO Repository: ome/omero-upload 2025-08-28 14:59:31,212 [ scc.merge] INFO Already up to date. 2025-08-28 14:59:31,213 [ scc.merge] INFO 2025-08-28 14:59:31,213 [ scc.merge] INFO 2025-08-28 14:59:31,213 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2025-08-28 14:59:31,213 [ scc.merge] INFO Updating deab817..160d894 2025-08-28 14:59:31,213 [ scc.merge] INFO Previously merged: 2025-08-28 14:59:31,213 [ scc.merge] INFO - PR 20 jburel 'Build' 2025-08-28 14:59:31,213 [ scc.merge] INFO 2025-08-28 14:59:31,213 [ scc.merge] INFO 2025-08-28 14:59:31,213 [ scc.merge] INFO Repository: ome/omero-web-zarr 2025-08-28 14:59:31,213 [ scc.merge] INFO Excluded PRs: 2025-08-28 14:59:31,213 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure) 2025-08-28 14:59:31,213 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2025-08-28 14:59:31,213 [ scc.merge] INFO Already up to date. 2025-08-28 14:59:31,213 [ scc.merge] INFO 2025-08-28 14:59:31,213 [ scc.merge] INFO Merged PRs: 2025-08-28 14:59:31,213 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2025-08-28 14:59:31,213 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2025-08-28 14:59:31,213 [ scc.merge] INFO 2025-08-28 14:59:31,213 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-28 14:59:31,213 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-08-28 14:59:31,213 [ scc.merge] INFO 2025-08-28 14:59:31,213 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2025-08-28 14:59:31,213 [ scc.merge] INFO Already up to date. 2025-08-28 14:59:31,213 [ scc.merge] INFO 2025-08-28 14:59:31,213 [ scc.merge] INFO 2025-08-28 14:59:31,213 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2025-08-28 14:59:31,213 [ scc.merge] INFO Already up to date. 2025-08-28 14:59:31,213 [ scc.merge] INFO 2025-08-28 14:59:31,213 [ scc.merge] INFO 2025-08-28 14:59:31,213 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2025-08-28 14:59:31,213 [ scc.merge] INFO Already up to date. 2025-08-28 14:59:31,213 [ scc.merge] INFO 2025-08-28 14:59:31,213 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-28 14:59:31,213 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2025-08-28 14:59:31,213 [ scc.merge] INFO 2025-08-28 14:59:31,213 [ scc.merge] INFO Repository: ome/scripts 2025-08-28 14:59:31,213 [ scc.merge] INFO Excluded PRs: 2025-08-28 14:59:31,213 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-08-28 14:59:31,213 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-08-28 14:59:31,214 [ scc.merge] INFO Updating 4b4c755..573db34 2025-08-28 14:59:31,214 [ scc.merge] INFO Previously merged: 2025-08-28 14:59:31,214 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2025-08-28 14:59:31,214 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2025-08-28 14:59:31,214 [ scc.merge] INFO 2025-08-28 14:59:31,214 [ scc.merge] INFO Merged PRs: 2025-08-28 14:59:31,214 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-08-28 14:59:31,214 [ scc.merge] INFO 2025-08-28 14:59:31,214 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-28 14:59:31,214 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-08-28 14:59:31,214 [ scc.merge] INFO 2025-08-28 14:59:31,214 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-08-28 14:59:31,214 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 14:59:31,216 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-08-28 14:59:31,216 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 14:59:31,218 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:59:31,219 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-08-28 14:59:31,219 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 14:59:31,221 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:59:31,221 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-08-28 14:59:31,221 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 14:59:31,223 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:59:31,223 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-08-28 14:59:31,223 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 14:59:31,225 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:59:31,225 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-08-28 14:59:31,225 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 14:59:31,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:59:31,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-08-28 14:59:31,228 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 14:59:31,230 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:59:31,230 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-08-28 14:59:31,230 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 14:59:31,232 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:59:31,232 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-08-28 14:59:31,232 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 14:59:31,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:59:31,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-08-28 14:59:31,234 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 14:59:31,237 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:59:31,237 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-08-28 14:59:31,237 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 14:59:31,239 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:59:31,239 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-08-28 14:59:31,239 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 14:59:31,241 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:59:31,241 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-08-28 14:59:31,241 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 14:59:31,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:59:31,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-08-28 14:59:31,244 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 14:59:31,246 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:59:31,246 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-08-28 14:59:31,246 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 14:59:31,248 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:59:31,248 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-08-28 14:59:31,248 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 14:59:31,250 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:59:31,250 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-08-28 14:59:31,250 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 14:59:31,252 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:59:31,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-08-28 14:59:31,253 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 14:59:31,255 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:59:31,255 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-08-28 14:59:31,255 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 14:59:31,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:59:31,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-08-28 14:59:31,257 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 14:59:31,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:59:31,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-08-28 14:59:31,259 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 14:59:31,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:59:31,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-08-28 14:59:31,262 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 14:59:31,264 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-28 14:59:31,264 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-08-28 14:59:31,264 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 14:59:31,266 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD d2b18af] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD 093d762] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-08-28 15:00:29,740 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-08-28 15:00:42,456 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-08-28 15:00:45,537 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-08-28 15:00:51,286 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-08-28 15:01:37,100 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS