![[Jenkins]](/jenkins/static/eb00aee0/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 601 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 533 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.2 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.7.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.15-py3-none-any.whl.metadata (25 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-45.0.6-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.14 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting pycparser (from cffi>=1.14->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.8.3-py3-none-any.whl.metadata (2.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.7.0-py3-none-any.whl (416 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-45.0.6-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (150 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.8.3-py3-none-any.whl (161 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Using cached ruamel.yaml-0.18.15-py3-none-any.whl (119 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.7.0 PyYAML-6.0.2 certifi-2025.8.3 cffi-1.17.1 charset_normalizer-3.4.3 cryptography-45.0.6 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.5 ruamel.yaml-0.18.15 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-08-29 00:43:57,644 [ scc.config] DEBUG Found github.token 2025-08-29 00:43:57,646 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:43:57,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:43:58,085 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:43:58,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:43:58,558 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:43:58,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-08-29 00:43:58,739 [ scc.gh] DEBUG 4033 remaining from 5000 (Reset at 00:08 2025-08-29 00:43:58,739 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:43:58,742 [ scc.git] DEBUG Check current status 2025-08-29 00:43:58,742 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:43:58,745 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-08-29 00:43:58,745 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:43:58,797 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-08-29 00:43:58,800 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-08-29 00:43:58,804 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-08-29 00:43:58,808 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-08-29 00:43:58,813 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-08-29 00:43:58,817 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-08-29 00:43:58,820 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-08-29 00:43:58,824 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-08-29 00:43:58,828 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-08-29 00:43:58,831 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-08-29 00:43:58,835 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-08-29 00:43:58,838 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-08-29 00:43:58,842 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-08-29 00:43:58,846 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-08-29 00:43:58,850 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-08-29 00:43:58,853 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-08-29 00:43:58,856 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-08-29 00:43:58,859 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-08-29 00:43:58,862 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-08-29 00:43:58,865 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-08-29 00:43:58,868 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-08-29 00:43:58,873 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-08-29 00:43:58,876 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:43:58,991 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:43:59,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-08-29 00:43:59,559 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:43:59,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:44:00,062 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:00,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:44:00,564 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:00,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:44:01,055 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:01,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:44:01,271 [ scc.git] DEBUG Resetting... 2025-08-29 00:44:01,271 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-08-29 00:44:01,280 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-08-29 00:44:01,281 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-08-29 00:44:01,392 [ scc.git] DEBUG Check current status 2025-08-29 00:44:01,392 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:44:01,394 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-08-29 00:44:01,395 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:44:01,444 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-08-29 00:44:01,447 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-08-29 00:44:01,451 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-08-29 00:44:01,455 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-08-29 00:44:01,460 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-08-29 00:44:01,463 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-08-29 00:44:01,467 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-08-29 00:44:01,471 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-08-29 00:44:01,474 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-08-29 00:44:01,478 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-08-29 00:44:01,482 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-08-29 00:44:01,485 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-08-29 00:44:01,489 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-08-29 00:44:01,492 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-08-29 00:44:01,495 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-08-29 00:44:01,498 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-08-29 00:44:01,501 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-08-29 00:44:01,504 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-08-29 00:44:01,508 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-08-29 00:44:01,511 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-08-29 00:44:01,514 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-08-29 00:44:01,518 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-08-29 00:44:01,519 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-08-29 00:44:01,519 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-08-29 00:44:01,519 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-08-29 00:44:01,519 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-08-29 00:44:01,519 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-08-29 00:44:01,519 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:44:01,523 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:01,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-08-29 00:44:02,063 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:02,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2025-08-29 00:44:02,379 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-29 00:44:02,379 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-08-29 00:44:02,630 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:02,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2025-08-29 00:44:02,932 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-29 00:44:02,932 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-08-29 00:44:03,184 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:03,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-08-29 00:44:03,449 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-29 00:44:03,449 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-08-29 00:44:03,449 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:44:03,449 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:44:03,449 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:44:03,452 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:44:03,454 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:44:03,455 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:44:03,459 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:44:03,462 [ scc.git] DEBUG Already up to date. 2025-08-29 00:44:03,462 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-08-29 00:44:03,758 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-08-29 00:44:03,758 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-08-29 00:44:03,766 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2025-08-29 00:44:04,054 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-08-29 00:44:04,055 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2025-08-29 00:44:04,062 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2025-08-29 00:44:04,358 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-08-29 00:44:04,358 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2025-08-29 00:44:04,365 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:44:04,366 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:44:04,366 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:44:04,368 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-08-29 00:44:04,371 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:44:04,373 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-08-29 00:44:04,391 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:44:04,393 [ scc.git] DEBUG scripts | 2 +- 2025-08-29 00:44:04,393 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-29 00:44:04,396 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:04,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:44:04,587 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-08-29 00:44:04,590 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:44:04,592 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-08-29 00:44:04,610 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:44:04,612 [ scc.git] DEBUG omero-figure | 2 +- 2025-08-29 00:44:04,613 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-29 00:44:04,838 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:05,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:44:05,071 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-08-29 00:44:05,074 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:44:05,077 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-08-29 00:44:05,095 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:44:05,097 [ scc.git] DEBUG omero-iviewer | 2 +- 2025-08-29 00:44:05,097 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-29 00:44:05,323 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:05,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:44:05,522 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:44:05,588 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2025-08-29 00:44:05,619 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2025-08-29 00:44:05,635 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-08-29 00:44:05,636 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:44:05,636 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:44:05,638 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:44:05,733 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6581fe9b90> has no local changes 2025-08-29 00:44:05,733 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#519 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/)' 2025-08-29 00:44:05,827 [ scc.git] DEBUG [detached HEAD b5d0b2d] merge master -Dorg -Snone 2025-08-29 00:44:05,827 [ scc.merge] INFO Repository: ome/omero-plugins 2025-08-29 00:44:05,827 [ scc.merge] INFO Already up to date. 2025-08-29 00:44:05,827 [ scc.merge] INFO 2025-08-29 00:44:05,827 [ scc.merge] INFO Merged PRs: 2025-08-29 00:44:05,827 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-08-29 00:44:05,828 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-08-29 00:44:05,828 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-08-29 00:44:05,828 [ scc.merge] INFO 2025-08-29 00:44:05,828 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-08-29 00:44:05,828 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-zarr': checked out 'f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb' Submodule path 'omero-figure': checked out 'd2c6f5bc061df1e02422728732b07ae7a929ccb2' Submodule path 'omero-iviewer': checked out 'bb94cf8da960e3283090038b04432f301560f5e4' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'scripts': checked out '573db340d5d1429fa17c7e486206948412a7c150' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2025-08-29 00:44:12,958 [ scc.config] DEBUG Found github.token 2025-08-29 00:44:12,960 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:13,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:44:13,407 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:13,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:44:13,854 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:14,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-08-29 00:44:14,039 [ scc.gh] DEBUG 4019 remaining from 5000 (Reset at 00:08 2025-08-29 00:44:14,040 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:44:14,042 [ scc.git] DEBUG Check current status 2025-08-29 00:44:14,042 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:44:14,045 [ scc.git] DEBUG b5d0b2d merge master -Dorg -Snone 2025-08-29 00:44:14,045 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:44:14,096 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-08-29 00:44:14,099 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-08-29 00:44:14,103 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-08-29 00:44:14,107 [ scc.git] DEBUG +f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb omero-cli-zarr (v0.6.1-1-gf7eea7c) 2025-08-29 00:44:14,112 [ scc.git] DEBUG +d2c6f5bc061df1e02422728732b07ae7a929ccb2 omero-figure (v7.2.1-14-gd2c6f5bc) 2025-08-29 00:44:14,115 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-08-29 00:44:14,119 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-08-29 00:44:14,123 [ scc.git] DEBUG +bb94cf8da960e3283090038b04432f301560f5e4 omero-iviewer (v0.16.0-16-gbb94cf8) 2025-08-29 00:44:14,127 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-08-29 00:44:14,130 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2025-08-29 00:44:14,134 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-08-29 00:44:14,137 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-08-29 00:44:14,141 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-08-29 00:44:14,144 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-08-29 00:44:14,148 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-08-29 00:44:14,151 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-08-29 00:44:14,154 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2025-08-29 00:44:14,157 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-08-29 00:44:14,161 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-08-29 00:44:14,164 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-08-29 00:44:14,167 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-08-29 00:44:14,171 [ scc.git] DEBUG +573db340d5d1429fa17c7e486206948412a7c150 scripts (v5.9.1-1-g573db34) 2025-08-29 00:44:14,174 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:44:14,174 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-08-29 00:44:14,175 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2025-08-29 00:44:14,291 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:14,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-08-29 00:44:14,881 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:15,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:44:15,429 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:15,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:44:15,894 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:16,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:44:16,371 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:16,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:44:16,584 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:44:16,664 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-08-29 00:44:16,664 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:44:16,666 [ scc.git] DEBUG Check current status 2025-08-29 00:44:16,666 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:44:16,669 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2025-08-29 00:44:16,669 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:44:16,711 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:44:16,836 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:17,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2025-08-29 00:44:17,410 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:17,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:44:17,926 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:18,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:44:18,411 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:18,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:44:18,861 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:19,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:44:19,082 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:44:19,121 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:44:19,122 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-08-29 00:44:19,122 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:44:19,124 [ scc.git] DEBUG Check current status 2025-08-29 00:44:19,124 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:44:19,127 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2025-08-29 00:44:19,127 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:44:19,169 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:44:19,333 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:19,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2025-08-29 00:44:19,897 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:20,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:44:20,420 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:20,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:44:20,902 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:21,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:44:21,369 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:21,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:44:21,564 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:44:21,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:44:21,606 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-08-29 00:44:21,606 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:44:21,608 [ scc.git] DEBUG Check current status 2025-08-29 00:44:21,608 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:44:21,611 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export 2025-08-29 00:44:21,611 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:44:21,653 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:44:21,816 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:22,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2025-08-29 00:44:22,361 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:22,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:44:22,868 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:23,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:44:23,325 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:23,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:44:23,791 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:24,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:44:24,010 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:44:24,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:44:24,053 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-08-29 00:44:24,053 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:44:24,055 [ scc.git] DEBUG Check current status 2025-08-29 00:44:24,055 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:44:24,058 [ scc.git] DEBUG f7eea7c Bump version: 0.6.1 → 0.6.2.dev0 2025-08-29 00:44:24,058 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:44:24,100 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:44:24,262 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:24,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2025-08-29 00:44:24,840 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:25,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:44:25,326 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:25,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:44:25,781 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:26,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:44:26,317 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:26,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:44:26,524 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:44:26,565 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:44:26,566 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-08-29 00:44:26,566 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:44:26,568 [ scc.git] DEBUG Check current status 2025-08-29 00:44:26,568 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:44:26,571 [ scc.git] DEBUG d2c6f5bc Merge pull request #638 from Rdornier/fix-arrow-opacity 2025-08-29 00:44:26,572 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:44:26,613 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:44:26,776 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:27,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2025-08-29 00:44:27,348 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:27,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:44:27,902 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:28,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:44:28,357 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:28,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:44:28,861 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:29,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:44:29,074 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:44:29,117 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:44:29,118 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-08-29 00:44:29,118 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:44:29,121 [ scc.git] DEBUG Check current status 2025-08-29 00:44:29,121 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:44:29,124 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2025-08-29 00:44:29,124 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:44:29,167 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:44:29,326 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:29,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2025-08-29 00:44:29,867 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:30,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:44:30,369 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:30,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:44:30,832 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:31,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:44:31,286 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:31,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:44:31,492 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:44:31,534 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:44:31,534 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-08-29 00:44:31,534 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:44:31,536 [ scc.git] DEBUG Check current status 2025-08-29 00:44:31,536 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:44:31,539 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2025-08-29 00:44:31,539 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:44:31,581 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:44:31,743 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:32,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2025-08-29 00:44:32,271 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:32,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:44:32,791 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:33,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:44:33,258 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:33,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:44:33,716 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:33,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:44:33,927 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:44:33,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:44:33,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-08-29 00:44:33,969 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:44:33,972 [ scc.git] DEBUG Check current status 2025-08-29 00:44:33,972 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:44:33,974 [ scc.git] DEBUG bb94cf8 Merge pull request #506 from will-moore/pypi_release_action 2025-08-29 00:44:33,975 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:44:34,017 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:44:34,179 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:34,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2025-08-29 00:44:34,775 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:35,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:44:35,292 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:35,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:44:35,768 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:35,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:44:36,252 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:36,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:44:36,451 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:44:36,493 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:44:36,494 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-08-29 00:44:36,494 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:44:36,496 [ scc.git] DEBUG Check current status 2025-08-29 00:44:36,496 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:44:36,499 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2025-08-29 00:44:36,499 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:44:36,540 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:44:36,703 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:36,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2025-08-29 00:44:37,250 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:37,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:44:37,804 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:37,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:44:38,248 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:38,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:44:38,716 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:38,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:44:38,940 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:44:38,981 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:44:38,982 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-08-29 00:44:38,982 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:44:38,985 [ scc.git] DEBUG Check current status 2025-08-29 00:44:38,985 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:44:38,987 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-08-29 00:44:38,988 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:44:39,030 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:44:39,192 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:39,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2025-08-29 00:44:39,745 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:40,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:44:40,287 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:40,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:44:40,745 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:40,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:44:41,202 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:41,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:44:41,416 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:44:41,457 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:44:41,457 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-08-29 00:44:41,457 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:44:41,460 [ scc.git] DEBUG Check current status 2025-08-29 00:44:41,460 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:44:41,462 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2025-08-29 00:44:41,463 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:44:41,504 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:44:41,668 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:42,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2025-08-29 00:44:42,314 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:42,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:44:42,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:43,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:44:43,295 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:43,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:44:43,757 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:43,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:44:43,976 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:44:44,017 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:44:44,017 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-08-29 00:44:44,017 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:44:44,020 [ scc.git] DEBUG Check current status 2025-08-29 00:44:44,020 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:44:44,022 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2025-08-29 00:44:44,023 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:44:44,065 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:44:44,228 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:44,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2025-08-29 00:44:44,790 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:45,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:44:45,308 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:45,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:44:45,777 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:45,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:44:46,228 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:46,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:44:46,444 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:44:46,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:44:46,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-08-29 00:44:46,488 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:44:46,490 [ scc.git] DEBUG Check current status 2025-08-29 00:44:46,490 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:44:46,493 [ scc.git] DEBUG bdfeb5e bump sphinx version 2025-08-29 00:44:46,493 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:44:46,537 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:44:46,696 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:47,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2025-08-29 00:44:47,291 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:47,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:44:47,823 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:48,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:44:48,279 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:48,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:44:48,747 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:48,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:44:48,981 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:44:49,022 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:44:49,023 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-08-29 00:44:49,023 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:44:49,025 [ scc.git] DEBUG Check current status 2025-08-29 00:44:49,025 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:44:49,028 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2025-08-29 00:44:49,029 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:44:49,072 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:44:49,233 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:49,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2025-08-29 00:44:49,804 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:50,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:44:50,298 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:50,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:44:50,757 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:50,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:44:51,219 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:51,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:44:51,459 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:44:51,501 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:44:51,502 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-08-29 00:44:51,502 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:44:51,504 [ scc.git] DEBUG Check current status 2025-08-29 00:44:51,504 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:44:51,506 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2025-08-29 00:44:51,507 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:44:51,550 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:44:51,711 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:51,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-08-29 00:44:51,928 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-08-29 00:44:51,928 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:52,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2025-08-29 00:44:52,470 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:52,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:44:53,013 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:53,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:44:53,479 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:53,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:44:53,973 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:54,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:44:54,174 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:44:54,216 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:44:54,217 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-08-29 00:44:54,217 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:44:54,219 [ scc.git] DEBUG Check current status 2025-08-29 00:44:54,219 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:44:54,221 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2025-08-29 00:44:54,222 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:44:54,263 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:44:54,426 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:54,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2025-08-29 00:44:54,977 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:55,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:44:55,502 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:55,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:44:55,959 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:56,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:44:56,440 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:56,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:44:56,653 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:44:56,694 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:44:56,695 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-08-29 00:44:56,695 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:44:56,698 [ scc.git] DEBUG Check current status 2025-08-29 00:44:56,698 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:44:56,700 [ scc.git] DEBUG 160d894 Fix display of code 2025-08-29 00:44:56,700 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:44:56,741 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:44:56,905 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:57,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2025-08-29 00:44:57,449 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:57,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:44:57,956 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:58,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:44:58,410 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:58,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:44:58,904 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:59,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:44:59,101 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:44:59,143 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:44:59,143 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-08-29 00:44:59,143 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:44:59,145 [ scc.git] DEBUG Check current status 2025-08-29 00:44:59,145 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:44:59,148 [ scc.git] DEBUG 8f3c313 Merge pull request #17 from jburel/build 2025-08-29 00:44:59,148 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:44:59,189 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:44:59,190 [ scc.git] DEBUG Repository configuration: base-branch: main 2025-08-29 00:44:59,353 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:44:59,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2025-08-29 00:44:59,921 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:00,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:45:00,444 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:00,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:45:00,958 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:01,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:45:01,497 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:01,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:45:01,728 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:45:01,767 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:45:01,768 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-08-29 00:45:01,768 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:45:01,770 [ scc.git] DEBUG Check current status 2025-08-29 00:45:01,770 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:45:01,773 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2025-08-29 00:45:01,773 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:45:01,815 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:45:01,980 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:02,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-08-29 00:45:02,231 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-08-29 00:45:02,232 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:02,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2025-08-29 00:45:02,819 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:03,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:45:03,370 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:03,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:45:03,847 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:04,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:45:04,305 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:04,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:45:04,519 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:45:04,562 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:45:04,563 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-08-29 00:45:04,563 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:45:04,565 [ scc.git] DEBUG Check current status 2025-08-29 00:45:04,565 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:45:04,568 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2025-08-29 00:45:04,568 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:45:04,609 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:45:04,771 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:05,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-08-29 00:45:05,041 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-08-29 00:45:05,042 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:05,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2025-08-29 00:45:05,615 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:05,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:45:06,156 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:06,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:45:06,640 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:06,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:45:07,096 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:07,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:45:07,303 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:45:07,346 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:45:07,347 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-08-29 00:45:07,347 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:45:07,349 [ scc.git] DEBUG Check current status 2025-08-29 00:45:07,349 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:45:07,351 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-08-29 00:45:07,352 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:45:07,395 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:45:07,555 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:07,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2025-08-29 00:45:08,137 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:08,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:45:08,661 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:09,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:45:09,414 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:09,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:45:10,044 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:10,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:45:10,248 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:45:10,290 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:45:10,291 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-08-29 00:45:10,291 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:45:10,293 [ scc.git] DEBUG Check current status 2025-08-29 00:45:10,293 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:45:10,296 [ scc.git] DEBUG 573db34 Bump version: 5.9.1 → 5.9.2.dev0 2025-08-29 00:45:10,296 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:45:10,339 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:45:10,340 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-08-29 00:45:10,500 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:10,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-08-29 00:45:10,715 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-08-29 00:45:10,716 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:11,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2025-08-29 00:45:11,291 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:11,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:45:11,863 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:12,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:45:12,338 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:12,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:45:12,836 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:13,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:45:13,241 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:45:13,283 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:45:13,283 [ scc.git] DEBUG Resetting... 2025-08-29 00:45:13,283 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-08-29 00:45:13,292 [ scc.git] DEBUG HEAD is now at b5d0b2d merge master -Dorg -Snone 2025-08-29 00:45:13,292 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-08-29 00:45:13,359 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2025-08-29 00:45:13,381 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2025-08-29 00:45:13,405 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2025-08-29 00:45:13,422 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2025-08-29 00:45:13,455 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2025-08-29 00:45:13,485 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-08-29 00:45:13,489 [ scc.git] DEBUG Check current status 2025-08-29 00:45:13,489 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:45:13,491 [ scc.git] DEBUG b5d0b2d merge master -Dorg -Snone 2025-08-29 00:45:13,492 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:45:13,539 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-08-29 00:45:13,542 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-08-29 00:45:13,546 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-08-29 00:45:13,550 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-08-29 00:45:13,555 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2025-08-29 00:45:13,558 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-08-29 00:45:13,561 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-08-29 00:45:13,566 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2025-08-29 00:45:13,569 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-08-29 00:45:13,573 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-08-29 00:45:13,576 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-08-29 00:45:13,580 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-08-29 00:45:13,583 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-08-29 00:45:13,587 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-08-29 00:45:13,590 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-08-29 00:45:13,593 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-08-29 00:45:13,596 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-08-29 00:45:13,599 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-08-29 00:45:13,602 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-08-29 00:45:13,605 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-08-29 00:45:13,608 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-08-29 00:45:13,613 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2025-08-29 00:45:13,613 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-08-29 00:45:13,614 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-08-29 00:45:13,614 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-08-29 00:45:13,614 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-08-29 00:45:13,614 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-08-29 00:45:13,614 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-08-29 00:45:13,614 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:45:13,616 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:13,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-08-29 00:45:14,152 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:14,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2025-08-29 00:45:14,446 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-29 00:45:14,697 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:15,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2025-08-29 00:45:15,298 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:15,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:45:15,850 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:16,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2025-08-29 00:45:16,492 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:16,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:45:16,692 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-08-29 00:45:16,944 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:17,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2025-08-29 00:45:17,289 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-29 00:45:17,541 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:17,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2025-08-29 00:45:18,144 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:18,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:45:18,640 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:18,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2025-08-29 00:45:19,153 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:19,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:45:19,375 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-08-29 00:45:19,627 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:19,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-08-29 00:45:19,900 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-29 00:45:20,152 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:20,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-08-29 00:45:20,744 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:21,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:45:21,284 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:21,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-08-29 00:45:21,778 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:22,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:45:22,037 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-08-29 00:45:22,037 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:45:22,037 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:45:22,038 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:45:22,040 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:45:22,042 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:45:22,042 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:45:22,045 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:45:22,049 [ scc.git] DEBUG Already up to date. 2025-08-29 00:45:22,049 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-08-29 00:45:22,356 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-08-29 00:45:22,356 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-08-29 00:45:22,364 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2025-08-29 00:45:22,647 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-08-29 00:45:22,647 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2025-08-29 00:45:22,654 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2025-08-29 00:45:22,953 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-08-29 00:45:22,953 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2025-08-29 00:45:22,961 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:45:22,961 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:45:22,961 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:45:22,963 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-08-29 00:45:22,966 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:45:22,968 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-08-29 00:45:22,971 [ scc.git] DEBUG Already up to date. 2025-08-29 00:45:22,974 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:23,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:45:23,172 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-08-29 00:45:23,176 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:45:23,178 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-08-29 00:45:23,181 [ scc.git] DEBUG Already up to date. 2025-08-29 00:45:23,425 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:23,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:45:23,632 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-08-29 00:45:23,635 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:45:23,638 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-08-29 00:45:23,641 [ scc.git] DEBUG Already up to date. 2025-08-29 00:45:23,884 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:24,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:45:24,094 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:45:24,152 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:45:24,152 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:45:24,155 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:45:24,346 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:24,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2025-08-29 00:45:24,566 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:45:24,566 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-08-29 00:45:24,566 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:45:24,566 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:45:24,569 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:45:24,571 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:45:24,572 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:45:24,575 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:45:24,578 [ scc.git] DEBUG Already up to date. 2025-08-29 00:45:24,578 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:45:24,578 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:45:24,578 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:45:24,580 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:45:24,622 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:45:24,622 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:45:24,625 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:45:24,664 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:45:24,667 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fda0f77fd10> has no local changes 2025-08-29 00:45:24,667 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#519 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/)' 2025-08-29 00:45:24,674 [ scc.git] DEBUG [detached HEAD 6357f51] merge master -Dorg -Ssuccess-only 2025-08-29 00:45:24,674 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:45:24,674 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:45:24,818 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:25,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2025-08-29 00:45:25,372 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:25,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2025-08-29 00:45:25,879 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:26,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2025-08-29 00:45:26,161 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:45:26,161 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-08-29 00:45:26,161 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:45:26,161 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:45:26,164 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:45:26,167 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:45:26,167 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:45:26,170 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:45:26,173 [ scc.git] DEBUG Already up to date. 2025-08-29 00:45:26,173 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:45:26,173 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:45:26,173 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:45:26,176 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:45:26,218 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:45:26,218 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:45:26,220 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:45:26,261 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:45:26,265 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fda0f79b190> has no local changes 2025-08-29 00:45:26,265 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Generated by OMERO-plugins-push#519 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/)' 2025-08-29 00:45:26,271 [ scc.git] DEBUG [detached HEAD 40eff5f] merge master -Dorg -Ssuccess-only 2025-08-29 00:45:26,271 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:45:26,272 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:45:26,413 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:26,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2025-08-29 00:45:27,082 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:27,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/71 HTTP/1.1" 200 None 2025-08-29 00:45:27,596 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:27,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None 2025-08-29 00:45:28,146 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:28,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:45:28,651 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:28,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None 2025-08-29 00:45:29,214 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:29,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/530b6b0ab1346ef837188b2eb3b1a5f679b490b6?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:45:29,423 [ scc.repo] DEBUG - PR 71 dominikl 'Escape slash character in image names' 2025-08-29 00:45:29,674 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:29,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/70 HTTP/1.1" 200 None 2025-08-29 00:45:30,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:30,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/69 HTTP/1.1" 200 None 2025-08-29 00:45:30,735 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:31,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None 2025-08-29 00:45:31,281 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:31,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:45:31,830 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:32,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:45:32,381 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:32,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None 2025-08-29 00:45:32,943 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:33,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/eb65a6621a6b07771ed3410c81ddaa1731004c22?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:45:33,165 [ scc.repo] DEBUG - PR 69 dominikl 'Fix help text for impo/export commands' 2025-08-29 00:45:33,417 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:33,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2025-08-29 00:45:33,979 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:34,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2025-08-29 00:45:34,492 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:34,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-08-29 00:45:35,067 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:35,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:45:35,637 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:35,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:45:36,159 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:36,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-08-29 00:45:36,656 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:36,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:45:36,870 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2025-08-29 00:45:37,122 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:37,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2025-08-29 00:45:37,652 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:37,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2025-08-29 00:45:37,906 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:45:37,906 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-08-29 00:45:37,906 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:45:37,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:45:37,909 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:45:37,912 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:45:37,912 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:45:37,915 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:45:37,918 [ scc.git] DEBUG Already up to date. 2025-08-29 00:45:37,918 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2025-08-29 00:45:38,210 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-08-29 00:45:38,210 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2025-08-29 00:45:38,214 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-08-29 00:45:38,495 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-08-29 00:45:38,495 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-08-29 00:45:38,500 [ scc.git] DEBUG Calling 'git fetch origin pull/71/head' 2025-08-29 00:45:38,777 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-08-29 00:45:38,777 [ scc.git] DEBUG * branch refs/pull/71/head -> FETCH_HEAD 2025-08-29 00:45:38,782 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:45:38,782 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:45:38,782 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:45:38,784 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a' 2025-08-29 00:45:38,788 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:45:38,791 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a' 2025-08-29 00:45:38,799 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:45:38,803 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++--------------------- 2025-08-29 00:45:38,803 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-) 2025-08-29 00:45:38,805 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:39,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:45:39,012 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eb65a6621a6b07771ed3410c81ddaa1731004c22' 2025-08-29 00:45:39,017 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:45:39,019 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Fix help text for impo/export commands) eb65a6621a6b07771ed3410c81ddaa1731004c22' 2025-08-29 00:45:39,029 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2025-08-29 00:45:39,030 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:45:39,033 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++-------- 2025-08-29 00:45:39,033 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 8 deletions(-) 2025-08-29 00:45:39,264 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:39,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:45:39,470 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...530b6b0ab1346ef837188b2eb3b1a5f679b490b6' 2025-08-29 00:45:39,474 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:45:39,477 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 71 (Escape slash character in image names) 530b6b0ab1346ef837188b2eb3b1a5f679b490b6' 2025-08-29 00:45:39,487 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2025-08-29 00:45:39,488 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:45:39,492 [ scc.git] DEBUG src/omero_cli_render.py | 21 ++++++++++++++------- 2025-08-29 00:45:39,492 [ scc.git] DEBUG 1 file changed, 14 insertions(+), 7 deletions(-) 2025-08-29 00:45:39,722 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:39,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:45:39,912 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:45:39,954 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:45:39,954 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:45:39,957 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:45:39,999 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:45:40,003 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fda0f7a0b10> has no local changes 2025-08-29 00:45:40,003 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 69 dominikl 'Fix help text for impo/export commands' - PR 71 dominikl 'Escape slash character in image names' Generated by OMERO-plugins-push#519 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/)' 2025-08-29 00:45:40,010 [ scc.git] DEBUG [detached HEAD 61f0d71] merge master -Dorg -Ssuccess-only 2025-08-29 00:45:40,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:45:40,010 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:45:40,164 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:40,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2025-08-29 00:45:40,900 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:41,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/180 HTTP/1.1" 200 None 2025-08-29 00:45:41,414 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:41,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/180/comments HTTP/1.1" 200 None 2025-08-29 00:45:41,921 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:42,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b8c63a5b03b25b3a39748b27729f50d97a5385de HTTP/1.1" 200 None 2025-08-29 00:45:42,469 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:42,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b8c63a5b03b25b3a39748b27729f50d97a5385de/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:45:43,023 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:43,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b8c63a5b03b25b3a39748b27729f50d97a5385de/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:45:43,543 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:43,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b8c63a5b03b25b3a39748b27729f50d97a5385de HTTP/1.1" 200 None 2025-08-29 00:45:44,074 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:44,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/b8c63a5b03b25b3a39748b27729f50d97a5385de?per_page=1 HTTP/1.1" 200 None 2025-08-29 00:45:44,582 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:44,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b8c63a5b03b25b3a39748b27729f50d97a5385de HTTP/1.1" 200 None 2025-08-29 00:45:45,068 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:45,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b8c63a5b03b25b3a39748b27729f50d97a5385de/status HTTP/1.1" 200 None 2025-08-29 00:45:45,286 [ scc.repo] DEBUG - PR 180 will-moore 'Register command' 2025-08-29 00:45:45,538 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:45,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2025-08-29 00:45:46,073 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:46,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2025-08-29 00:45:46,603 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:46,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-08-29 00:45:47,125 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:47,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:45:47,691 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:47,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:45:48,215 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:48,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-08-29 00:45:48,769 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:49,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bb180dbb97ddc67cd2cf655d56058ba7da765769?per_page=1 HTTP/1.1" 200 None 2025-08-29 00:45:49,263 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:49,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-08-29 00:45:49,750 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:49,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/status HTTP/1.1" 200 None 2025-08-29 00:45:49,973 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2025-08-29 00:45:50,225 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:50,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2025-08-29 00:45:50,723 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:50,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2025-08-29 00:45:51,233 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:51,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None 2025-08-29 00:45:51,737 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:52,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None 2025-08-29 00:45:52,265 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:52,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2025-08-29 00:45:52,819 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:53,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/169 HTTP/1.1" 200 None 2025-08-29 00:45:53,332 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:53,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2025-08-29 00:45:53,860 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:54,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2025-08-29 00:45:54,381 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:54,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2025-08-29 00:45:54,909 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:55,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2025-08-29 00:45:55,440 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:55,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2025-08-29 00:45:56,014 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:56,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2025-08-29 00:45:56,589 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:56,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2025-08-29 00:45:56,881 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:45:56,881 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-08-29 00:45:56,881 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:45:56,881 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:45:56,884 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:45:56,887 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:45:56,887 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:45:56,891 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:45:56,905 [ scc.git] DEBUG Updating 11d3587..f7eea7c 2025-08-29 00:45:57,131 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:57,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2025-08-29 00:45:57,777 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:58,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2025-08-29 00:45:58,494 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:58,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2025-08-29 00:45:59,170 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:45:59,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2025-08-29 00:45:59,889 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:00,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2025-08-29 00:46:00,520 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:01,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2025-08-29 00:46:01,256 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:01,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2025-08-29 00:46:01,769 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2025-08-29 00:46:02,064 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-08-29 00:46:02,065 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2025-08-29 00:46:02,069 [ scc.git] DEBUG Calling 'git fetch origin pull/180/head' 2025-08-29 00:46:02,517 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-08-29 00:46:02,517 [ scc.git] DEBUG * branch refs/pull/180/head -> FETCH_HEAD 2025-08-29 00:46:02,520 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:46:02,520 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:46:02,521 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:46:02,523 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-08-29 00:46:02,527 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:46:02,529 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-08-29 00:46:02,539 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:46:02,543 [ scc.git] DEBUG CHANGELOG.md | 4 ++-- 2025-08-29 00:46:02,543 [ scc.git] DEBUG src/omero_zarr/masks.py | 11 +++++------ 2025-08-29 00:46:02,543 [ scc.git] DEBUG test/integration/clitest/test_export.py | 32 ++++++++++++++++++-------------- 2025-08-29 00:46:02,543 [ scc.git] DEBUG 3 files changed, 25 insertions(+), 22 deletions(-) 2025-08-29 00:46:02,545 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:02,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:46:02,746 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8c63a5b03b25b3a39748b27729f50d97a5385de' 2025-08-29 00:46:02,750 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:46:02,753 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 180 (Register command) b8c63a5b03b25b3a39748b27729f50d97a5385de' 2025-08-29 00:46:02,764 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2025-08-29 00:46:02,765 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:46:02,769 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 5 +- 2025-08-29 00:46:02,769 [ scc.git] DEBUG .isort.cfg | 2 +- 2025-08-29 00:46:02,769 [ scc.git] DEBUG src/omero_zarr/cli.py | 55 +++ 2025-08-29 00:46:02,769 [ scc.git] DEBUG src/omero_zarr/import_xml.py | 146 ++++++ 2025-08-29 00:46:02,769 [ scc.git] DEBUG src/omero_zarr/register.py | 717 ++++++++++++++++++++++++++++++ 2025-08-29 00:46:02,769 [ scc.git] DEBUG test/integration/clitest/test_register.py | 165 +++++++ 2025-08-29 00:46:02,769 [ scc.git] DEBUG 6 files changed, 1087 insertions(+), 3 deletions(-) 2025-08-29 00:46:02,769 [ scc.git] DEBUG create mode 100644 src/omero_zarr/import_xml.py 2025-08-29 00:46:02,769 [ scc.git] DEBUG create mode 100644 src/omero_zarr/register.py 2025-08-29 00:46:02,769 [ scc.git] DEBUG create mode 100644 test/integration/clitest/test_register.py 2025-08-29 00:46:02,997 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:03,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:46:03,223 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:46:03,266 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:46:03,266 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:46:03,268 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:46:03,309 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:46:03,314 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fda0f7693d0> has no local changes 2025-08-29 00:46:03,314 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 174 will-moore 'Skip wells' (stage: draft) - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..f7eea7c Previously merged: - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 180 will-moore 'Register command' Generated by OMERO-plugins-push#519 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/)' 2025-08-29 00:46:03,320 [ scc.git] DEBUG [detached HEAD b4e9daa] merge master -Dorg -Ssuccess-only 2025-08-29 00:46:03,321 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:46:03,321 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:46:03,476 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:03,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2025-08-29 00:46:04,183 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:04,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2025-08-29 00:46:04,722 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:05,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2025-08-29 00:46:05,324 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:05,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/639 HTTP/1.1" 200 None 2025-08-29 00:46:05,820 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-29 00:46:06,072 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:06,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf HTTP/1.1" 200 None 2025-08-29 00:46:06,663 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:07,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:46:07,254 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:07,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:46:07,865 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:08,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf HTTP/1.1" 200 None 2025-08-29 00:46:08,363 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:08,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ea5d315d21af32b6ce5529e86b939672d110c8cf?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:46:08,584 [ scc.repo] DEBUG - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7' 2025-08-29 00:46:08,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:09,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637 HTTP/1.1" 200 None 2025-08-29 00:46:09,358 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:09,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637/comments HTTP/1.1" 200 None 2025-08-29 00:46:09,605 [ scc.repo] DEBUG # ... Include label: include 2025-08-29 00:46:09,856 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:10,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d15ebc233eb1b3e235bad4fe780e78c80339f39e HTTP/1.1" 200 None 2025-08-29 00:46:10,441 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:10,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d15ebc233eb1b3e235bad4fe780e78c80339f39e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:46:10,927 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:11,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d15ebc233eb1b3e235bad4fe780e78c80339f39e HTTP/1.1" 200 None 2025-08-29 00:46:11,523 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:11,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/d15ebc233eb1b3e235bad4fe780e78c80339f39e?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:46:11,728 [ scc.repo] DEBUG - PR 637 Rdornier 'Fix scalebar position' 2025-08-29 00:46:11,980 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:12,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/630 HTTP/1.1" 200 None 2025-08-29 00:46:12,507 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:12,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/630/comments HTTP/1.1" 200 None 2025-08-29 00:46:13,049 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:13,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29 HTTP/1.1" 200 None 2025-08-29 00:46:13,600 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:13,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:46:14,129 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:14,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:46:14,638 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:14,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29 HTTP/1.1" 200 None 2025-08-29 00:46:15,110 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:15,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/7a71d8f456b659444095e496a4c6d2449c306a29?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:46:15,339 [ scc.repo] DEBUG - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2025-08-29 00:46:15,591 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:15,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/619 HTTP/1.1" 200 None 2025-08-29 00:46:16,153 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:16,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/616 HTTP/1.1" 200 None 2025-08-29 00:46:16,676 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:16,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/616/comments HTTP/1.1" 200 None 2025-08-29 00:46:16,945 [ scc.repo] DEBUG # ... Include label: include 2025-08-29 00:46:17,196 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:17,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/83df5184c9424f29b3f8b578d50a0e9d0be3c363 HTTP/1.1" 200 None 2025-08-29 00:46:17,830 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:18,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/83df5184c9424f29b3f8b578d50a0e9d0be3c363/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:46:18,360 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:18,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/83df5184c9424f29b3f8b578d50a0e9d0be3c363 HTTP/1.1" 200 None 2025-08-29 00:46:18,961 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:19,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/83df5184c9424f29b3f8b578d50a0e9d0be3c363?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:46:19,180 [ scc.repo] DEBUG - PR 616 Rdornier 'Fix labels around border' 2025-08-29 00:46:19,432 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:19,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/612 HTTP/1.1" 200 None 2025-08-29 00:46:19,956 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:20,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/612/comments HTTP/1.1" 200 None 2025-08-29 00:46:20,450 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:20,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36 HTTP/1.1" 200 None 2025-08-29 00:46:20,990 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:21,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:46:21,535 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:21,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:46:22,041 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:22,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36 HTTP/1.1" 200 None 2025-08-29 00:46:22,517 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:22,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/9ae98a37ea474db7d473b99abb884cd4b1fdfb36?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:46:22,779 [ scc.repo] DEBUG - PR 612 will-moore 'Script version' 2025-08-29 00:46:23,031 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:23,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610 HTTP/1.1" 200 None 2025-08-29 00:46:23,539 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:23,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610/comments HTTP/1.1" 200 None 2025-08-29 00:46:24,079 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:24,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None 2025-08-29 00:46:24,650 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:24,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:46:25,191 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:25,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:46:25,690 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:25,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None 2025-08-29 00:46:26,240 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:26,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/59ca9bf79effaded86845d8c49fb94bda6727333?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:46:26,462 [ scc.repo] DEBUG - PR 610 will-moore 'Add docs/contributing.rst' 2025-08-29 00:46:26,713 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:26,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/605 HTTP/1.1" 200 None 2025-08-29 00:46:27,224 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:27,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/605/comments HTTP/1.1" 200 None 2025-08-29 00:46:27,725 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:28,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895 HTTP/1.1" 200 None 2025-08-29 00:46:28,259 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:28,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:46:28,768 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:29,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:46:29,282 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:29,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895 HTTP/1.1" 200 None 2025-08-29 00:46:29,827 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:30,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/8996880bb97573423561afaca6de24e03ec57895?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:46:30,061 [ scc.repo] DEBUG - PR 605 Tom-TBT 'Colorbar feature' 2025-08-29 00:46:30,313 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:30,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2025-08-29 00:46:30,847 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:31,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2025-08-29 00:46:31,135 [ scc.repo] DEBUG # ... Include label: include 2025-08-29 00:46:31,385 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:31,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25 HTTP/1.1" 200 None 2025-08-29 00:46:31,989 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:32,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:46:32,491 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:32,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25 HTTP/1.1" 200 None 2025-08-29 00:46:32,975 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:33,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:46:33,216 [ scc.repo] DEBUG - PR 600 Rdornier 'Label on rois' 2025-08-29 00:46:33,216 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:46:33,216 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-08-29 00:46:33,217 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:46:33,217 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:46:33,220 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:46:33,223 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:46:33,223 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:46:33,227 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:46:33,243 [ scc.git] DEBUG Updating 9cc36cde..d2c6f5bc 2025-08-29 00:46:33,468 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:33,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2025-08-29 00:46:34,228 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:34,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2025-08-29 00:46:34,947 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:35,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2025-08-29 00:46:35,632 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:36,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2025-08-29 00:46:36,371 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:36,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2025-08-29 00:46:36,827 [ scc.git] DEBUG Calling 'git fetch origin pull/600/head' 2025-08-29 00:46:37,132 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-29 00:46:37,133 [ scc.git] DEBUG * branch refs/pull/600/head -> FETCH_HEAD 2025-08-29 00:46:37,137 [ scc.git] DEBUG Calling 'git fetch origin pull/605/head' 2025-08-29 00:46:37,425 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-29 00:46:37,425 [ scc.git] DEBUG * branch refs/pull/605/head -> FETCH_HEAD 2025-08-29 00:46:37,430 [ scc.git] DEBUG Calling 'git fetch origin pull/610/head' 2025-08-29 00:46:37,720 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-29 00:46:37,720 [ scc.git] DEBUG * branch refs/pull/610/head -> FETCH_HEAD 2025-08-29 00:46:37,725 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-08-29 00:46:38,007 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-29 00:46:38,007 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-08-29 00:46:38,012 [ scc.git] DEBUG Calling 'git fetch origin pull/616/head' 2025-08-29 00:46:38,304 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-29 00:46:38,305 [ scc.git] DEBUG * branch refs/pull/616/head -> FETCH_HEAD 2025-08-29 00:46:38,310 [ scc.git] DEBUG Calling 'git fetch origin pull/630/head' 2025-08-29 00:46:38,593 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-29 00:46:38,593 [ scc.git] DEBUG * branch refs/pull/630/head -> FETCH_HEAD 2025-08-29 00:46:38,599 [ scc.git] DEBUG Calling 'git fetch origin pull/637/head' 2025-08-29 00:46:38,882 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-29 00:46:38,882 [ scc.git] DEBUG * branch refs/pull/637/head -> FETCH_HEAD 2025-08-29 00:46:38,887 [ scc.git] DEBUG Calling 'git fetch origin pull/639/head' 2025-08-29 00:46:39,175 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-29 00:46:39,175 [ scc.git] DEBUG * branch refs/pull/639/head -> FETCH_HEAD 2025-08-29 00:46:39,180 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:46:39,180 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:46:39,180 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:46:39,182 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25' 2025-08-29 00:46:39,190 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:46:39,192 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 600 (Label on rois) 54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25' 2025-08-29 00:46:39,212 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:46:39,223 [ scc.git] DEBUG .gitignore | 2 + 2025-08-29 00:46:39,223 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 274 +++++++- 2025-08-29 00:46:39,223 [ scc.git] DEBUG src/css/figure.css | 20 +- 2025-08-29 00:46:39,223 [ scc.git] DEBUG src/images/text-icon-24.png | Bin 0 -> 2477 bytes 2025-08-29 00:46:39,223 [ scc.git] DEBUG src/index.html | 34 +- 2025-08-29 00:46:39,223 [ scc.git] DEBUG src/js/models/panel_model.js | 69 +- 2025-08-29 00:46:39,223 [ scc.git] DEBUG src/js/shapeEditorTest.js | 29 +- 2025-08-29 00:46:39,223 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 208 +++++- 2025-08-29 00:46:39,223 [ scc.git] DEBUG src/js/shape_editor/line.js | 215 +++++- 2025-08-29 00:46:39,223 [ scc.git] DEBUG src/js/shape_editor/point.js | 203 +++++- 2025-08-29 00:46:39,223 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 207 +++++- 2025-08-29 00:46:39,223 [ scc.git] DEBUG src/js/shape_editor/rect.js | 212 +++++- 2025-08-29 00:46:39,223 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 411 ++++++++++- 2025-08-29 00:46:39,223 [ scc.git] DEBUG src/js/shape_editor/text.js | 754 +++++++++++++++++++++ 2025-08-29 00:46:39,224 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +- 2025-08-29 00:46:39,226 [ scc.git] DEBUG src/js/views/right_panel_view.js | 121 +++- 2025-08-29 00:46:39,226 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 57 +- 2025-08-29 00:46:39,226 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 182 ++++- 2025-08-29 00:46:39,226 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:39,226 [ scc.git] DEBUG src/shapeEditorTest.html | 37 +- 2025-08-29 00:46:39,226 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 4 +- 2025-08-29 00:46:39,226 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 51 ++ 2025-08-29 00:46:39,226 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 382 +++++++---- 2025-08-29 00:46:39,226 [ scc.git] DEBUG 22 files changed, 3249 insertions(+), 225 deletions(-) 2025-08-29 00:46:39,226 [ scc.git] DEBUG create mode 100644 src/images/text-icon-24.png 2025-08-29 00:46:39,226 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/text.js 2025-08-29 00:46:39,226 [ scc.git] DEBUG create mode 100644 src/templates/shapes/shape_sidebar.template.html 2025-08-29 00:46:39,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:46:39,415 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8996880bb97573423561afaca6de24e03ec57895' 2025-08-29 00:46:39,423 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:46:39,425 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 605 (Colorbar feature) 8996880bb97573423561afaca6de24e03ec57895' 2025-08-29 00:46:39,457 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-08-29 00:46:39,457 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-08-29 00:46:39,457 [ scc.git] DEBUG Auto-merging src/index.html 2025-08-29 00:46:39,457 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2025-08-29 00:46:39,457 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2025-08-29 00:46:39,457 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2025-08-29 00:46:39,458 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:46:39,465 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 392 +++++++++++++++++++-- 2025-08-29 00:46:39,465 [ scc.git] DEBUG src/css/figure.css | 133 ++++++- 2025-08-29 00:46:39,465 [ scc.git] DEBUG src/index.html | 4 + 2025-08-29 00:46:39,465 [ scc.git] DEBUG src/js/models/panel_model.js | 169 +++++++-- 2025-08-29 00:46:39,465 [ scc.git] DEBUG src/js/views/colorbar_form_view.js | 124 +++++++ 2025-08-29 00:46:39,465 [ scc.git] DEBUG src/js/views/lutpicker.js | 67 ++-- 2025-08-29 00:46:39,465 [ scc.git] DEBUG src/js/views/panel_view.js | 79 ++++- 2025-08-29 00:46:39,465 [ scc.git] DEBUG src/js/views/right_panel_view.js | 13 + 2025-08-29 00:46:39,465 [ scc.git] DEBUG src/templates/colorbar.template.html | 42 +++ 2025-08-29 00:46:39,465 [ scc.git] DEBUG src/templates/colorbar_form.template.html | 137 +++++++ 2025-08-29 00:46:39,465 [ scc.git] DEBUG 10 files changed, 1080 insertions(+), 80 deletions(-) 2025-08-29 00:46:39,465 [ scc.git] DEBUG create mode 100644 src/js/views/colorbar_form_view.js 2025-08-29 00:46:39,465 [ scc.git] DEBUG create mode 100644 src/templates/colorbar.template.html 2025-08-29 00:46:39,465 [ scc.git] DEBUG create mode 100644 src/templates/colorbar_form.template.html 2025-08-29 00:46:39,667 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:39,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:46:39,872 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...59ca9bf79effaded86845d8c49fb94bda6727333' 2025-08-29 00:46:39,880 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:46:39,882 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 610 (Add docs/contributing.rst) 59ca9bf79effaded86845d8c49fb94bda6727333' 2025-08-29 00:46:39,903 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:46:39,906 [ scc.git] DEBUG .github/PULL_REQUEST_TEMPLATE.md | 5 +++ 2025-08-29 00:46:39,906 [ scc.git] DEBUG README.rst | 4 +- 2025-08-29 00:46:39,907 [ scc.git] DEBUG docs/contributing.md | 89 ++++++++++++++++++++++++++++++++++++++++ 2025-08-29 00:46:39,907 [ scc.git] DEBUG 3 files changed, 97 insertions(+), 1 deletion(-) 2025-08-29 00:46:39,907 [ scc.git] DEBUG create mode 100644 .github/PULL_REQUEST_TEMPLATE.md 2025-08-29 00:46:39,907 [ scc.git] DEBUG create mode 100644 docs/contributing.md 2025-08-29 00:46:40,124 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:40,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:46:40,312 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9ae98a37ea474db7d473b99abb884cd4b1fdfb36' 2025-08-29 00:46:40,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:46:40,323 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Script version) 9ae98a37ea474db7d473b99abb884cd4b1fdfb36' 2025-08-29 00:46:40,353 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-08-29 00:46:40,353 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-29 00:46:40,353 [ scc.git] DEBUG Auto-merging package.json 2025-08-29 00:46:40,353 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-08-29 00:46:40,353 [ scc.git] DEBUG Auto-merging src/index.html 2025-08-29 00:46:40,354 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:46:40,362 [ scc.git] DEBUG .bumpversion.cfg | 2 + 2025-08-29 00:46:40,362 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 7 +- 2025-08-29 00:46:40,363 [ scc.git] DEBUG omero_figure/urls.py | 3 + 2025-08-29 00:46:40,363 [ scc.git] DEBUG omero_figure/views.py | 54 ++++++++++++++ 2025-08-29 00:46:40,363 [ scc.git] DEBUG package-lock.json | 8 +- 2025-08-29 00:46:40,363 [ scc.git] DEBUG package.json | 3 +- 2025-08-29 00:46:40,363 [ scc.git] DEBUG src/css/figure.css | 2 +- 2025-08-29 00:46:40,363 [ scc.git] DEBUG src/html/dialogs/scriptManagerDialog.html | 86 ++++++++++++++++++++++ 2025-08-29 00:46:40,363 [ scc.git] DEBUG src/index.html | 20 +++-- 2025-08-29 00:46:40,363 [ scc.git] DEBUG src/js/views/figure_view.js | 54 ++++++++++++++ 2025-08-29 00:46:40,363 [ scc.git] DEBUG vite.config.js | 3 + 2025-08-29 00:46:40,363 [ scc.git] DEBUG 11 files changed, 230 insertions(+), 12 deletions(-) 2025-08-29 00:46:40,363 [ scc.git] DEBUG create mode 100644 src/html/dialogs/scriptManagerDialog.html 2025-08-29 00:46:40,564 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:40,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:46:40,767 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...83df5184c9424f29b3f8b578d50a0e9d0be3c363' 2025-08-29 00:46:40,775 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:46:40,777 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 616 (Fix labels around border) 83df5184c9424f29b3f8b578d50a0e9d0be3c363' 2025-08-29 00:46:40,803 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-08-29 00:46:40,803 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2025-08-29 00:46:40,803 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2025-08-29 00:46:40,803 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/panel_view.js 2025-08-29 00:46:40,804 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-29 00:46:40,804 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-29 00:46:40,809 [ scc.git] DEBUG Calling 'git reset --hard edb8b6fb7d3d090f178711976108c83f9297a058' 2025-08-29 00:46:40,819 [ scc.git] DEBUG HEAD is now at edb8b6fb merge master -Dorg -Ssuccess-only: PR 612 (Script version) 2025-08-29 00:46:41,019 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:41,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:46:41,217 [ scc.git] DEBUG Calling 'git merge-base d2c6f5bc061df1e02422728732b07ae7a929ccb2 83df5184c9424f29b3f8b578d50a0e9d0be3c363' 2025-08-29 00:46:41,221 [ scc.git] DEBUG Calling 'git diff --name-only d2c6f5bc061df1e02422728732b07ae7a929ccb2..d2c6f5bc061df1e02422728732b07ae7a929ccb2' 2025-08-29 00:46:41,225 [ scc.git] INFO - PR 616 Rdornier 'Fix labels around border' Conflicting PR. Removed from build [OMERO-plugins-push#519](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/js/views/panel_view.js - PR #605 Tom-TBT 'Colorbar feature' - src/js/views/panel_view.js --conflicts 2025-08-29 00:46:41,227 [ scc.config] DEBUG Found github.token 2025-08-29 00:46:41,227 [ scc.git] DEBUG Not adding comment to issue #616, already --conflicts. 2025-08-29 00:46:41,227 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7a71d8f456b659444095e496a4c6d2449c306a29' 2025-08-29 00:46:41,235 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:46:41,238 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 630 (Fix color and position for ALL new panel insets) 7a71d8f456b659444095e496a4c6d2449c306a29' 2025-08-29 00:46:41,256 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2025-08-29 00:46:41,256 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/right_panel_view.js 2025-08-29 00:46:41,256 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-29 00:46:41,257 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-29 00:46:41,260 [ scc.git] DEBUG Calling 'git reset --hard edb8b6fb7d3d090f178711976108c83f9297a058' 2025-08-29 00:46:41,266 [ scc.git] DEBUG HEAD is now at edb8b6fb merge master -Dorg -Ssuccess-only: PR 612 (Script version) 2025-08-29 00:46:41,469 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:41,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:46:41,670 [ scc.git] DEBUG Calling 'git merge-base d2c6f5bc061df1e02422728732b07ae7a929ccb2 7a71d8f456b659444095e496a4c6d2449c306a29' 2025-08-29 00:46:41,673 [ scc.git] DEBUG Calling 'git diff --name-only 9cc36cde05bde4def7b62b07c2e9ae5f66712e96..d2c6f5bc061df1e02422728732b07ae7a929ccb2' 2025-08-29 00:46:41,677 [ scc.git] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' Conflicting PR. Removed from build [OMERO-plugins-push#519](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/js/views/right_panel_view.js - PR #605 Tom-TBT 'Colorbar feature' - src/js/views/right_panel_view.js --conflicts 2025-08-29 00:46:41,680 [ scc.config] DEBUG Found github.token 2025-08-29 00:46:41,680 [ scc.git] DEBUG Not adding comment to issue #630, already --conflicts. 2025-08-29 00:46:41,680 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d15ebc233eb1b3e235bad4fe780e78c80339f39e' 2025-08-29 00:46:41,689 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:46:41,691 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 637 (Fix scalebar position) d15ebc233eb1b3e235bad4fe780e78c80339f39e' 2025-08-29 00:46:41,716 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-08-29 00:46:41,716 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-08-29 00:46:41,716 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2025-08-29 00:46:41,716 [ scc.git] DEBUG Auto-merging src/templates/scalebar_form.template.html 2025-08-29 00:46:41,716 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/templates/scalebar_form.template.html 2025-08-29 00:46:41,717 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-29 00:46:41,717 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-29 00:46:41,722 [ scc.git] DEBUG Calling 'git reset --hard edb8b6fb7d3d090f178711976108c83f9297a058' 2025-08-29 00:46:41,731 [ scc.git] DEBUG HEAD is now at edb8b6fb merge master -Dorg -Ssuccess-only: PR 612 (Script version) 2025-08-29 00:46:41,922 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:42,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:46:42,123 [ scc.git] DEBUG Calling 'git merge-base d2c6f5bc061df1e02422728732b07ae7a929ccb2 d15ebc233eb1b3e235bad4fe780e78c80339f39e' 2025-08-29 00:46:42,127 [ scc.git] DEBUG Calling 'git diff --name-only d2c6f5bc061df1e02422728732b07ae7a929ccb2..d2c6f5bc061df1e02422728732b07ae7a929ccb2' 2025-08-29 00:46:42,131 [ scc.git] INFO - PR 637 Rdornier 'Fix scalebar position' Conflicting PR. Removed from build [OMERO-plugins-push#519](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/templates/scalebar_form.template.html --conflicts 2025-08-29 00:46:42,133 [ scc.config] DEBUG Found github.token 2025-08-29 00:46:42,133 [ scc.git] DEBUG Not adding comment to issue #637, already --conflicts. 2025-08-29 00:46:42,133 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ea5d315d21af32b6ce5529e86b939672d110c8cf' 2025-08-29 00:46:42,141 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:46:42,143 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 639 (Bump vite from 6.2.6 to 6.2.7) ea5d315d21af32b6ce5529e86b939672d110c8cf' 2025-08-29 00:46:42,160 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-29 00:46:42,160 [ scc.git] DEBUG Auto-merging package.json 2025-08-29 00:46:42,161 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:46:42,165 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2025-08-29 00:46:42,165 [ scc.git] DEBUG package.json | 2 +- 2025-08-29 00:46:42,165 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2025-08-29 00:46:42,375 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:42,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:46:42,630 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:46:42,674 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:46:42,674 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:46:42,676 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:46:42,717 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:46:42,723 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fda0f736610> has no local changes 2025-08-29 00:46:42,723 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) - PR 619 will-moore 'OME-Zarr support' (stage: draft) - PR 543 will-moore 'Plate well labels' (exclude comment) Updating 9cc36cde..d2c6f5bc Previously merged: - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 600 Rdornier 'Label on rois' - PR 605 Tom-TBT 'Colorbar feature' - PR 610 will-moore 'Add docs/contributing.rst' - PR 612 will-moore 'Script version' - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7' Conflicting PRs (not included): - PR 616 Rdornier 'Fix labels around border' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 637 Rdornier 'Fix scalebar position' Generated by OMERO-plugins-push#519 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/)' 2025-08-29 00:46:42,732 [ scc.git] DEBUG [detached HEAD a33f04c0] merge master -Dorg -Ssuccess-only 2025-08-29 00:46:42,732 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:46:42,732 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:46:42,882 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:43,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2025-08-29 00:46:43,456 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:43,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2025-08-29 00:46:43,957 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:44,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2025-08-29 00:46:44,430 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:44,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-08-29 00:46:44,998 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:45,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:46:45,514 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:45,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-08-29 00:46:46,063 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:46,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:46:46,286 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2025-08-29 00:46:46,286 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:46:46,286 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-08-29 00:46:46,286 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:46:46,286 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:46:46,289 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:46:46,292 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:46:46,292 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:46:46,295 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:46:46,298 [ scc.git] DEBUG Already up to date. 2025-08-29 00:46:46,298 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2025-08-29 00:46:46,585 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2025-08-29 00:46:46,585 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2025-08-29 00:46:46,590 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:46:46,590 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:46:46,590 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:46:46,593 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-08-29 00:46:46,596 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:46:46,598 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-08-29 00:46:46,606 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2025-08-29 00:46:46,607 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:46:46,610 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2025-08-29 00:46:46,610 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2025-08-29 00:46:46,613 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:46,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:46:46,811 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:46:46,853 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:46:46,853 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:46:46,856 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:46:46,896 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:46:46,899 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fda0f72f650> has no local changes 2025-08-29 00:46:46,899 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#519 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/)' 2025-08-29 00:46:46,906 [ scc.git] DEBUG [detached HEAD c1e32ff] merge master -Dorg -Ssuccess-only 2025-08-29 00:46:46,906 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:46:46,906 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:46:47,063 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:47,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2025-08-29 00:46:47,630 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:47,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2025-08-29 00:46:48,169 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:48,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2025-08-29 00:46:48,706 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:48,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2025-08-29 00:46:48,986 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-29 00:46:49,238 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:49,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2025-08-29 00:46:49,868 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:50,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:46:50,416 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:50,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:46:50,941 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:51,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2025-08-29 00:46:51,563 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:51,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:46:51,769 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2025-08-29 00:46:52,022 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:52,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2025-08-29 00:46:52,603 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:52,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2025-08-29 00:46:53,166 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:53,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2025-08-29 00:46:53,396 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-29 00:46:53,647 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:54,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-08-29 00:46:54,262 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:54,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:46:54,825 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:55,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:46:55,384 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:55,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-08-29 00:46:55,987 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:56,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:46:56,193 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-08-29 00:46:56,445 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:56,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2025-08-29 00:46:56,698 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-29 00:46:56,950 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:57,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-08-29 00:46:57,542 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:57,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:46:58,118 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:58,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:46:58,694 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:58,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-08-29 00:46:59,190 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:59,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:46:59,394 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-08-29 00:46:59,646 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:46:59,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2025-08-29 00:46:59,926 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-29 00:47:00,178 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:00,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-08-29 00:47:00,768 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:01,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:47:01,282 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:01,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:47:01,856 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:02,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-08-29 00:47:02,344 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:02,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:47:02,551 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-08-29 00:47:02,804 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:03,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2025-08-29 00:47:03,301 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:03,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2025-08-29 00:47:03,547 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-29 00:47:03,799 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:04,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-08-29 00:47:04,400 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:04,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:47:04,930 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:05,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:47:05,453 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:05,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-08-29 00:47:06,040 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:06,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:47:06,234 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-08-29 00:47:06,486 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:06,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2025-08-29 00:47:06,760 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-29 00:47:07,012 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:07,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-08-29 00:47:07,627 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:07,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:47:08,145 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:08,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:47:08,690 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:09,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-08-29 00:47:09,293 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:09,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:47:09,498 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-08-29 00:47:09,750 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:10,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2025-08-29 00:47:10,017 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-29 00:47:10,269 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:10,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-08-29 00:47:10,839 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:11,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:47:11,379 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:11,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:47:11,960 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:12,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-08-29 00:47:12,586 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:12,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:47:12,817 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-08-29 00:47:12,817 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:47:12,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-08-29 00:47:12,817 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:47:12,817 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:47:12,820 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:47:12,823 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:47:12,823 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:47:12,826 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:47:12,829 [ scc.git] DEBUG Already up to date. 2025-08-29 00:47:12,829 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2025-08-29 00:47:13,116 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-29 00:47:13,116 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2025-08-29 00:47:13,121 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2025-08-29 00:47:13,395 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-29 00:47:13,395 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2025-08-29 00:47:13,400 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2025-08-29 00:47:13,673 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-29 00:47:13,673 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2025-08-29 00:47:13,677 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2025-08-29 00:47:13,953 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-29 00:47:13,953 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2025-08-29 00:47:13,958 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2025-08-29 00:47:14,244 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-29 00:47:14,244 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2025-08-29 00:47:14,249 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2025-08-29 00:47:14,542 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-29 00:47:14,542 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2025-08-29 00:47:14,547 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2025-08-29 00:47:14,834 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-29 00:47:14,834 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2025-08-29 00:47:14,839 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:47:14,839 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:47:14,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:47:14,842 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-08-29 00:47:14,845 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:47:14,847 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-08-29 00:47:14,857 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:47:14,862 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2025-08-29 00:47:14,862 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2025-08-29 00:47:14,865 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:15,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:47:15,068 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-08-29 00:47:15,072 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:47:15,074 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-08-29 00:47:15,090 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-29 00:47:15,091 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:47:15,097 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2025-08-29 00:47:15,097 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2025-08-29 00:47:15,320 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:15,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:47:15,526 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-08-29 00:47:15,529 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:47:15,532 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-08-29 00:47:15,549 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-29 00:47:15,549 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-08-29 00:47:15,550 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-29 00:47:15,550 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-29 00:47:15,553 [ scc.git] DEBUG Calling 'git reset --hard 1882101d086714e0bd1c96db9ff98ccb8567386a' 2025-08-29 00:47:15,558 [ scc.git] DEBUG HEAD is now at 1882101 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2025-08-29 00:47:15,778 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:15,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:47:15,968 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-08-29 00:47:15,971 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-08-29 00:47:15,974 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#519](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2025-08-29 00:47:15,976 [ scc.config] DEBUG Found github.token 2025-08-29 00:47:15,976 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2025-08-29 00:47:15,976 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-08-29 00:47:15,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:47:15,981 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-08-29 00:47:15,999 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-29 00:47:16,000 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:47:16,005 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2025-08-29 00:47:16,005 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2025-08-29 00:47:16,220 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:16,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:47:16,410 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-08-29 00:47:16,413 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:47:16,416 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-08-29 00:47:16,432 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-29 00:47:16,433 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:47:16,438 [ scc.git] DEBUG package-lock.json | 6 +++--- 2025-08-29 00:47:16,438 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2025-08-29 00:47:16,662 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:16,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:47:16,860 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-08-29 00:47:16,864 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:47:16,866 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-08-29 00:47:16,883 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-29 00:47:16,883 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-08-29 00:47:16,884 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-29 00:47:16,884 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-29 00:47:16,887 [ scc.git] DEBUG Calling 'git reset --hard 35e114eec4af0c9488bdfd2e82fd842c4a6dbc23' 2025-08-29 00:47:16,892 [ scc.git] DEBUG HEAD is now at 35e114e merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-08-29 00:47:17,112 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:17,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:47:17,295 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-08-29 00:47:17,298 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-08-29 00:47:17,301 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#519](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2025-08-29 00:47:17,303 [ scc.config] DEBUG Found github.token 2025-08-29 00:47:17,303 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2025-08-29 00:47:17,303 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-08-29 00:47:17,307 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:47:17,309 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-08-29 00:47:17,328 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-29 00:47:17,328 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-08-29 00:47:17,328 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-29 00:47:17,328 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-29 00:47:17,331 [ scc.git] DEBUG Calling 'git reset --hard 35e114eec4af0c9488bdfd2e82fd842c4a6dbc23' 2025-08-29 00:47:17,336 [ scc.git] DEBUG HEAD is now at 35e114e merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-08-29 00:47:17,547 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:17,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:47:17,763 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-08-29 00:47:17,766 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-08-29 00:47:17,769 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#519](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2025-08-29 00:47:17,771 [ scc.config] DEBUG Found github.token 2025-08-29 00:47:17,771 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2025-08-29 00:47:17,772 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:47:17,813 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:47:17,813 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:47:17,815 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:47:17,856 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:47:17,860 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fda0f82e910> has no local changes 2025-08-29 00:47:17,861 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#519 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/)' 2025-08-29 00:47:17,868 [ scc.git] DEBUG [detached HEAD 6af5e36] merge master -Dorg -Ssuccess-only 2025-08-29 00:47:17,869 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:47:17,869 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:47:18,015 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:18,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2025-08-29 00:47:18,647 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:19,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2025-08-29 00:47:19,317 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:19,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2025-08-29 00:47:19,848 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:20,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None 2025-08-29 00:47:20,421 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:20,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None 2025-08-29 00:47:20,690 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-29 00:47:20,941 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:21,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2025-08-29 00:47:21,538 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:21,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:47:22,143 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:22,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:47:22,766 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:23,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2025-08-29 00:47:23,403 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:23,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:47:23,623 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2025-08-29 00:47:23,875 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:24,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2025-08-29 00:47:24,188 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-29 00:47:24,440 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:24,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-08-29 00:47:25,030 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:25,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:47:25,609 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:25,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:47:26,145 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:26,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-08-29 00:47:26,771 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:26,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:47:26,998 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-08-29 00:47:27,250 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:27,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2025-08-29 00:47:27,816 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:28,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2025-08-29 00:47:28,298 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:28,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2025-08-29 00:47:28,793 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:29,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2025-08-29 00:47:29,304 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:29,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-08-29 00:47:29,893 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:30,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:47:30,397 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:30,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-08-29 00:47:30,949 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:31,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:47:31,161 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2025-08-29 00:47:31,414 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:31,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2025-08-29 00:47:31,934 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:32,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2025-08-29 00:47:32,480 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:32,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-08-29 00:47:33,022 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:33,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:47:33,543 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:33,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-08-29 00:47:34,025 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:34,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:47:34,249 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2025-08-29 00:47:34,500 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:34,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2025-08-29 00:47:35,032 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:35,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2025-08-29 00:47:35,520 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:35,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-08-29 00:47:36,063 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:36,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:47:36,551 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:36,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-08-29 00:47:37,118 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:37,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:47:37,338 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2025-08-29 00:47:37,590 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:37,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2025-08-29 00:47:38,089 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:38,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2025-08-29 00:47:38,587 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:38,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None 2025-08-29 00:47:39,164 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:39,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:47:39,713 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:39,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:47:39,999 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:47:39,999 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-08-29 00:47:39,999 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:47:39,999 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:47:40,002 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:47:40,005 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:47:40,005 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:47:40,008 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:47:40,016 [ scc.git] DEBUG Updating 7a798ce..bb94cf8 2025-08-29 00:47:40,250 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:40,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2025-08-29 00:47:40,723 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2025-08-29 00:47:41,040 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-08-29 00:47:41,040 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2025-08-29 00:47:41,044 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2025-08-29 00:47:41,324 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-08-29 00:47:41,324 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2025-08-29 00:47:41,328 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2025-08-29 00:47:41,617 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-08-29 00:47:41,617 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2025-08-29 00:47:41,622 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2025-08-29 00:47:41,903 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-08-29 00:47:41,903 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2025-08-29 00:47:41,908 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head' 2025-08-29 00:47:42,197 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-08-29 00:47:42,197 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD 2025-08-29 00:47:42,201 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:47:42,202 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:47:42,202 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:47:42,204 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-08-29 00:47:42,210 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:47:42,212 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-08-29 00:47:42,226 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2025-08-29 00:47:42,226 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2025-08-29 00:47:42,228 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:47:42,231 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2025-08-29 00:47:42,231 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2025-08-29 00:47:42,231 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2025-08-29 00:47:42,234 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:42,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:47:42,423 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2025-08-29 00:47:42,430 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:47:42,432 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2025-08-29 00:47:42,452 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2025-08-29 00:47:42,452 [ scc.git] DEBUG Auto-merging src/app/context.js 2025-08-29 00:47:42,452 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2025-08-29 00:47:42,452 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2025-08-29 00:47:42,453 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:47:42,459 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2025-08-29 00:47:42,459 [ scc.git] DEBUG src/app/context.js | 6 +- 2025-08-29 00:47:42,459 [ scc.git] DEBUG src/app/header.html | 5 + 2025-08-29 00:47:42,459 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2025-08-29 00:47:42,459 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2025-08-29 00:47:42,459 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2025-08-29 00:47:42,459 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2025-08-29 00:47:42,459 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2025-08-29 00:47:42,675 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:42,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:47:42,866 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2025-08-29 00:47:42,874 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:47:42,876 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2025-08-29 00:47:42,891 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2025-08-29 00:47:42,892 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:47:42,896 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2025-08-29 00:47:42,896 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2025-08-29 00:47:42,896 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2025-08-29 00:47:43,119 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:43,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:47:43,312 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-08-29 00:47:43,320 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:47:43,322 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-08-29 00:47:43,339 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:47:43,349 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2025-08-29 00:47:43,349 [ scc.git] DEBUG package.json | 2 +- 2025-08-29 00:47:43,349 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2025-08-29 00:47:43,565 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:43,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:47:43,769 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-08-29 00:47:43,776 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:47:43,778 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-08-29 00:47:43,817 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-29 00:47:43,817 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-08-29 00:47:43,818 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-29 00:47:43,818 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-29 00:47:43,821 [ scc.git] DEBUG Calling 'git reset --hard 15d737b1209bca839f0ed05d80fa35d20ad89b04' 2025-08-29 00:47:43,829 [ scc.git] DEBUG HEAD is now at 15d737b merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) 2025-08-29 00:47:44,021 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:44,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:47:44,242 [ scc.git] DEBUG Calling 'git merge-base bb94cf8da960e3283090038b04432f301560f5e4 45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-08-29 00:47:44,246 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..bb94cf8da960e3283090038b04432f301560f5e4' 2025-08-29 00:47:44,249 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Conflicting PR. Removed from build [OMERO-plugins-push#519](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/consoleText) for more details. Possible conflicts: - PR #499 dependabot[bot] 'Bump nanoid and mocha' - package-lock.json --conflicts 2025-08-29 00:47:44,251 [ scc.config] DEBUG Found github.token 2025-08-29 00:47:44,251 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts. 2025-08-29 00:47:44,251 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:47:44,294 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:47:44,294 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:47:44,296 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:47:44,337 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:47:44,344 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fda0f80d190> has no local changes 2025-08-29 00:47:44,344 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..bb94cf8 Previously merged: - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Generated by OMERO-plugins-push#519 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/)' 2025-08-29 00:47:44,352 [ scc.git] DEBUG [detached HEAD ee0beda] merge master -Dorg -Ssuccess-only 2025-08-29 00:47:44,352 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:47:44,352 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:47:44,495 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:44,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2025-08-29 00:47:45,029 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:45,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2025-08-29 00:47:45,577 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:45,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2025-08-29 00:47:46,120 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:46,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:47:46,627 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:46,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2025-08-29 00:47:47,157 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:47,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:47:47,360 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-29 00:47:47,612 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:47,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2025-08-29 00:47:48,144 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:48,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2025-08-29 00:47:48,643 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:48,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-08-29 00:47:49,227 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:49,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:47:49,725 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:49,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-08-29 00:47:50,238 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:50,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:47:50,465 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2025-08-29 00:47:50,465 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:47:50,465 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-08-29 00:47:50,466 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:47:50,466 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:47:50,468 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:47:50,471 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:47:50,471 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:47:50,474 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:47:50,477 [ scc.git] DEBUG Already up to date. 2025-08-29 00:47:50,477 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2025-08-29 00:47:50,756 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-08-29 00:47:50,756 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2025-08-29 00:47:50,761 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2025-08-29 00:47:51,042 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-08-29 00:47:51,042 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2025-08-29 00:47:51,047 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:47:51,047 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:47:51,047 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:47:51,049 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-08-29 00:47:51,054 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:47:51,056 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-08-29 00:47:51,065 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:47:51,068 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2025-08-29 00:47:51,069 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2025-08-29 00:47:51,069 [ scc.git] DEBUG requirements.txt | 2 +- 2025-08-29 00:47:51,069 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2025-08-29 00:47:51,069 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2025-08-29 00:47:51,069 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2025-08-29 00:47:51,071 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:51,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:47:51,291 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2025-08-29 00:47:51,296 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:47:51,298 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2025-08-29 00:47:51,308 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:47:51,311 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-08-29 00:47:51,311 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-29 00:47:51,543 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:51,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:47:51,805 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:47:51,847 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:47:51,847 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:47:51,849 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:47:51,890 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:47:51,894 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fda0f7407d0> has no local changes 2025-08-29 00:47:51,894 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#519 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/)' 2025-08-29 00:47:51,901 [ scc.git] DEBUG [detached HEAD 4b3f054] merge master -Dorg -Ssuccess-only 2025-08-29 00:47:51,901 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:47:51,901 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:47:52,057 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:52,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2025-08-29 00:47:52,636 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:52,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2025-08-29 00:47:53,163 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:53,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2025-08-29 00:47:53,735 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:54,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-08-29 00:47:54,323 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:54,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:47:54,819 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:55,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-08-29 00:47:55,367 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:55,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:47:55,594 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-08-29 00:47:55,846 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:56,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2025-08-29 00:47:56,389 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:56,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2025-08-29 00:47:56,918 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:57,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-08-29 00:47:57,483 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:57,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:47:57,977 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:58,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-08-29 00:47:58,525 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:58,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:47:58,745 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-08-29 00:47:58,745 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:47:58,745 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-08-29 00:47:58,745 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:47:58,745 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:47:58,748 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:47:58,751 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:47:58,751 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:47:58,754 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:47:58,762 [ scc.git] DEBUG Updating 3cd120c..55060a2 2025-08-29 00:47:58,997 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:47:59,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2025-08-29 00:47:59,464 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2025-08-29 00:47:59,763 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-08-29 00:47:59,763 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2025-08-29 00:47:59,767 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2025-08-29 00:48:00,049 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-08-29 00:48:00,049 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2025-08-29 00:48:00,054 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:48:00,054 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:00,054 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:00,057 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-08-29 00:48:00,061 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:00,064 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-08-29 00:48:00,077 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2025-08-29 00:48:00,078 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2025-08-29 00:48:00,078 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-08-29 00:48:00,078 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-08-29 00:48:00,078 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-29 00:48:00,078 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-29 00:48:00,081 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2025-08-29 00:48:00,086 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-08-29 00:48:00,088 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:00,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:48:00,289 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-08-29 00:48:00,294 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2025-08-29 00:48:00,298 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#519](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2025-08-29 00:48:00,300 [ scc.config] DEBUG Found github.token 2025-08-29 00:48:00,300 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2025-08-29 00:48:00,300 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2025-08-29 00:48:00,305 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:00,307 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2025-08-29 00:48:00,322 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-08-29 00:48:00,322 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-08-29 00:48:00,322 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2025-08-29 00:48:00,322 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-29 00:48:00,323 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-29 00:48:00,325 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2025-08-29 00:48:00,332 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-08-29 00:48:00,542 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:00,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:48:00,739 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2025-08-29 00:48:00,744 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2025-08-29 00:48:00,747 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#519](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2025-08-29 00:48:00,749 [ scc.config] DEBUG Found github.token 2025-08-29 00:48:00,749 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2025-08-29 00:48:00,749 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:48:00,792 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:00,792 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:00,794 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:48:00,834 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:48:00,839 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fda0f8f8290> has no local changes 2025-08-29 00:48:00,839 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#519 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/)' 2025-08-29 00:48:00,846 [ scc.git] DEBUG [detached HEAD 0b5b52f] merge master -Dorg -Ssuccess-only 2025-08-29 00:48:00,846 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:48:00,847 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:48:00,992 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:01,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2025-08-29 00:48:01,634 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:01,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2025-08-29 00:48:02,180 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:02,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2025-08-29 00:48:02,707 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:02,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:48:03,234 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:03,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:48:03,767 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:03,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2025-08-29 00:48:04,233 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:04,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:48:04,479 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-29 00:48:04,731 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:04,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2025-08-29 00:48:04,996 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-29 00:48:05,248 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:05,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2025-08-29 00:48:05,865 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:06,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:48:06,423 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:06,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:48:07,005 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:07,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2025-08-29 00:48:07,612 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:07,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:48:07,823 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2025-08-29 00:48:08,075 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:08,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2025-08-29 00:48:08,385 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-29 00:48:08,637 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:08,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2025-08-29 00:48:09,214 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:09,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:48:09,771 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:10,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:48:10,426 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:10,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2025-08-29 00:48:10,944 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:11,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:48:11,168 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2025-08-29 00:48:11,420 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:11,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2025-08-29 00:48:11,953 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:12,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2025-08-29 00:48:12,458 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:12,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2025-08-29 00:48:12,958 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:13,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2025-08-29 00:48:13,470 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:13,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2025-08-29 00:48:13,993 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:14,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2025-08-29 00:48:14,513 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:14,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2025-08-29 00:48:14,807 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:48:14,807 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-08-29 00:48:14,807 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:14,807 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:14,810 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:48:14,813 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:48:14,813 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:48:14,816 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:48:14,819 [ scc.git] DEBUG Already up to date. 2025-08-29 00:48:14,819 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2025-08-29 00:48:15,104 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-08-29 00:48:15,104 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2025-08-29 00:48:15,108 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2025-08-29 00:48:15,420 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-08-29 00:48:15,421 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2025-08-29 00:48:15,425 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2025-08-29 00:48:15,760 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-08-29 00:48:15,760 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2025-08-29 00:48:15,764 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:48:15,764 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:15,764 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:15,767 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2025-08-29 00:48:15,769 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:15,772 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2025-08-29 00:48:15,780 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:48:15,784 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2025-08-29 00:48:15,784 [ scc.git] DEBUG package.json | 2 +- 2025-08-29 00:48:15,784 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2025-08-29 00:48:15,787 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:15,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:48:15,984 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2025-08-29 00:48:15,987 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:15,990 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2025-08-29 00:48:16,000 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-29 00:48:16,000 [ scc.git] DEBUG Auto-merging package.json 2025-08-29 00:48:16,001 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:48:16,005 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2025-08-29 00:48:16,005 [ scc.git] DEBUG package.json | 2 +- 2025-08-29 00:48:16,005 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2025-08-29 00:48:16,236 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:16,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:48:16,428 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2025-08-29 00:48:16,431 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:16,434 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2025-08-29 00:48:16,443 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:48:16,446 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-08-29 00:48:16,446 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-29 00:48:16,680 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:16,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:48:16,892 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:48:16,936 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:16,936 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:16,938 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:48:16,978 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:48:16,982 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fda0c612250> has no local changes 2025-08-29 00:48:16,982 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#519 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/)' 2025-08-29 00:48:16,990 [ scc.git] DEBUG [detached HEAD 8c94d85] merge master -Dorg -Ssuccess-only 2025-08-29 00:48:16,990 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:48:16,990 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:48:17,144 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:17,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 2 2025-08-29 00:48:17,358 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:48:17,358 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-08-29 00:48:17,358 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:17,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:17,360 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:48:17,363 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:48:17,363 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:48:17,366 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:48:17,369 [ scc.git] DEBUG Already up to date. 2025-08-29 00:48:17,369 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:48:17,369 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:17,369 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:17,371 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:48:17,411 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:17,411 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:17,414 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:48:17,455 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:48:17,458 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fda0f82c550> has no local changes 2025-08-29 00:48:17,458 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Generated by OMERO-plugins-push#519 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/)' 2025-08-29 00:48:17,465 [ scc.git] DEBUG [detached HEAD d46ee5b] merge master -Dorg -Ssuccess-only 2025-08-29 00:48:17,465 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:48:17,465 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:48:17,610 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:17,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2025-08-29 00:48:18,180 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:18,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None 2025-08-29 00:48:18,728 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:18,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None 2025-08-29 00:48:19,235 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:19,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-08-29 00:48:19,858 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:20,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:48:20,372 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:20,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:48:20,946 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:21,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-08-29 00:48:21,545 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:21,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None 2025-08-29 00:48:22,040 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:22,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-08-29 00:48:22,533 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:22,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None 2025-08-29 00:48:22,870 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions' 2025-08-29 00:48:23,121 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:23,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2025-08-29 00:48:23,401 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:48:23,401 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-08-29 00:48:23,402 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:23,402 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:23,404 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:48:23,407 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:48:23,407 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:48:23,410 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:48:23,413 [ scc.git] DEBUG Already up to date. 2025-08-29 00:48:23,413 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head' 2025-08-29 00:48:23,705 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2025-08-29 00:48:23,705 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD 2025-08-29 00:48:23,710 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:48:23,710 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:23,710 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:23,712 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3' 2025-08-29 00:48:23,716 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:23,718 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3' 2025-08-29 00:48:23,727 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:48:23,730 [ scc.git] DEBUG setup.py | 4 +- 2025-08-29 00:48:23,730 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 + 2025-08-29 00:48:23,730 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++-- 2025-08-29 00:48:23,730 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-) 2025-08-29 00:48:23,733 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:23,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:48:23,934 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:48:23,978 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:23,978 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:23,980 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:48:24,021 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:48:24,025 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fda0c625d50> has no local changes 2025-08-29 00:48:24,025 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' Generated by OMERO-plugins-push#519 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/)' 2025-08-29 00:48:24,031 [ scc.git] DEBUG [detached HEAD dfb2cf4] merge master -Dorg -Ssuccess-only 2025-08-29 00:48:24,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:48:24,032 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:48:24,187 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:24,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2025-08-29 00:48:24,789 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:25,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2025-08-29 00:48:25,318 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:25,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2025-08-29 00:48:25,812 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:26,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-08-29 00:48:26,454 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:26,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:48:26,968 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:27,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-08-29 00:48:27,466 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:27,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:48:27,694 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2025-08-29 00:48:27,694 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:48:27,695 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-08-29 00:48:27,695 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:27,695 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:27,698 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:48:27,700 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:48:27,700 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:48:27,703 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:48:27,706 [ scc.git] DEBUG Already up to date. 2025-08-29 00:48:27,706 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2025-08-29 00:48:28,009 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2025-08-29 00:48:28,009 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2025-08-29 00:48:28,013 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:48:28,013 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:28,014 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:28,016 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-08-29 00:48:28,019 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:28,022 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-08-29 00:48:28,031 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2025-08-29 00:48:28,031 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2025-08-29 00:48:28,031 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2025-08-29 00:48:28,031 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2025-08-29 00:48:28,031 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2025-08-29 00:48:28,031 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2025-08-29 00:48:28,031 [ scc.git] DEBUG Auto-merging setup.py 2025-08-29 00:48:28,031 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2025-08-29 00:48:28,032 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-29 00:48:28,032 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-29 00:48:28,035 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2025-08-29 00:48:28,039 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2025-08-29 00:48:28,042 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:28,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:48:28,240 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-08-29 00:48:28,243 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2025-08-29 00:48:28,246 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#519](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/urls.py - setup.py - omero_signup/views.py --conflicts 2025-08-29 00:48:28,248 [ scc.config] DEBUG Found github.token 2025-08-29 00:48:28,248 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2025-08-29 00:48:28,249 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:48:28,290 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:28,290 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:28,293 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:48:28,332 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:48:28,335 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fda0c641d50> has no local changes 2025-08-29 00:48:28,335 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#519 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/)' 2025-08-29 00:48:28,342 [ scc.git] DEBUG [detached HEAD c740542] merge master -Dorg -Ssuccess-only 2025-08-29 00:48:28,343 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:48:28,343 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:48:28,492 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:28,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2025-08-29 00:48:29,088 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:29,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/76 HTTP/1.1" 200 None 2025-08-29 00:48:29,594 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:29,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None 2025-08-29 00:48:30,180 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:30,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:48:30,745 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:31,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:48:31,257 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:31,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None 2025-08-29 00:48:31,752 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:31,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:48:31,958 [ scc.repo] DEBUG - PR 76 will-moore 'Run cli deps' 2025-08-29 00:48:32,209 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:32,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2025-08-29 00:48:32,722 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:32,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2025-08-29 00:48:33,221 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:33,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2025-08-29 00:48:33,888 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:34,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:48:34,471 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:34,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:48:35,058 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:35,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None 2025-08-29 00:48:35,624 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:35,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None 2025-08-29 00:48:36,154 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:36,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2025-08-29 00:48:36,672 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:36,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2025-08-29 00:48:37,167 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:37,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-08-29 00:48:37,740 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:37,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:48:38,218 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:38,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-08-29 00:48:38,780 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:38,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:48:38,979 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-08-29 00:48:38,980 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:48:38,980 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-08-29 00:48:38,980 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:38,980 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:38,983 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:48:38,985 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:48:38,985 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:48:38,988 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:48:38,992 [ scc.git] DEBUG Already up to date. 2025-08-29 00:48:38,992 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2025-08-29 00:48:39,306 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-08-29 00:48:39,306 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2025-08-29 00:48:39,311 [ scc.git] DEBUG Calling 'git fetch origin pull/76/head' 2025-08-29 00:48:39,592 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-08-29 00:48:39,592 [ scc.git] DEBUG * branch refs/pull/76/head -> FETCH_HEAD 2025-08-29 00:48:39,597 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:48:39,597 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:39,597 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:39,599 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2025-08-29 00:48:39,604 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:39,606 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2025-08-29 00:48:39,619 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:48:39,623 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2025-08-29 00:48:39,623 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2025-08-29 00:48:39,623 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2025-08-29 00:48:39,623 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2025-08-29 00:48:39,623 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2025-08-29 00:48:39,625 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2025-08-29 00:48:39,625 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2025-08-29 00:48:39,625 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2025-08-29 00:48:39,625 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:39,625 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2025-08-29 00:48:39,625 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2025-08-29 00:48:39,625 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2025-08-29 00:48:39,626 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2025-08-29 00:48:39,626 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2025-08-29 00:48:39,626 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2025-08-29 00:48:39,626 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2025-08-29 00:48:39,626 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2025-08-29 00:48:39,626 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2025-08-29 00:48:39,626 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2025-08-29 00:48:39,626 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2025-08-29 00:48:39,626 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2025-08-29 00:48:39,626 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2025-08-29 00:48:39,626 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2025-08-29 00:48:39,626 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2025-08-29 00:48:39,626 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2025-08-29 00:48:39,626 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2025-08-29 00:48:39,626 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2025-08-29 00:48:39,626 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2025-08-29 00:48:39,626 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2025-08-29 00:48:39,626 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2025-08-29 00:48:39,626 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2025-08-29 00:48:39,626 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2025-08-29 00:48:39,626 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2025-08-29 00:48:39,626 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2025-08-29 00:48:39,626 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2025-08-29 00:48:39,626 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2025-08-29 00:48:39,626 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2025-08-29 00:48:39,626 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2025-08-29 00:48:39,626 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2025-08-29 00:48:39,626 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2025-08-29 00:48:39,626 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2025-08-29 00:48:39,626 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2025-08-29 00:48:39,626 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2025-08-29 00:48:39,626 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2025-08-29 00:48:39,626 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2025-08-29 00:48:39,626 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2025-08-29 00:48:39,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:48:39,824 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6' 2025-08-29 00:48:39,828 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:39,830 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 76 (Run cli deps) bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6' 2025-08-29 00:48:39,841 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:48:39,844 [ scc.git] DEBUG docker | 1 + 2025-08-29 00:48:39,844 [ scc.git] DEBUG 1 file changed, 1 insertion(+) 2025-08-29 00:48:40,076 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:40,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:48:40,277 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:48:40,319 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:40,319 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:40,322 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:48:40,362 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:48:40,366 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fda0c622410> has no local changes 2025-08-29 00:48:40,366 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' - PR 76 will-moore 'Run cli deps' Generated by OMERO-plugins-push#519 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/)' 2025-08-29 00:48:40,373 [ scc.git] DEBUG [detached HEAD 377b783] merge master -Dorg -Ssuccess-only 2025-08-29 00:48:40,373 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:48:40,373 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:48:40,529 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:40,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2025-08-29 00:48:40,753 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:48:40,753 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-08-29 00:48:40,753 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:40,753 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:40,756 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:48:40,758 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:48:40,758 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:48:40,761 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:48:40,764 [ scc.git] DEBUG Already up to date. 2025-08-29 00:48:40,764 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:48:40,764 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:40,764 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:40,767 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:48:40,808 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:40,808 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:40,810 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:48:40,849 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:48:40,853 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fda0c64bf50> has no local changes 2025-08-29 00:48:40,853 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#519 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/)' 2025-08-29 00:48:40,860 [ scc.git] DEBUG [detached HEAD bd086ea] merge master -Dorg -Ssuccess-only 2025-08-29 00:48:40,860 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:48:40,860 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:48:41,005 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:41,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2025-08-29 00:48:41,244 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:48:41,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-08-29 00:48:41,245 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:41,245 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:41,247 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:48:41,250 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:48:41,250 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:48:41,253 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:48:41,261 [ scc.git] DEBUG Updating deab817..160d894 2025-08-29 00:48:41,497 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:42,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2025-08-29 00:48:42,052 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:48:42,052 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:42,052 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:42,055 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:48:42,096 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:42,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:42,099 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:48:42,140 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:48:42,144 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fda0f7f1950> has no local changes 2025-08-29 00:48:42,144 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Generated by OMERO-plugins-push#519 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/)' 2025-08-29 00:48:42,151 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:48:42,151 [ scc.git] DEBUG [detached HEAD 32be2c3] merge master -Dorg -Ssuccess-only 2025-08-29 00:48:42,151 [ scc.git] INFO Overriding base-branch from master to main 2025-08-29 00:48:42,151 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:48:42,304 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:42,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2025-08-29 00:48:42,904 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:43,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2025-08-29 00:48:43,412 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:43,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/5934b1d040b20e93fd532ce2ba55e2d6fd5da3a2 HTTP/1.1" 200 None 2025-08-29 00:48:43,987 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:44,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/5934b1d040b20e93fd532ce2ba55e2d6fd5da3a2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:48:44,523 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:44,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/5934b1d040b20e93fd532ce2ba55e2d6fd5da3a2/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:48:45,031 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:45,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/5934b1d040b20e93fd532ce2ba55e2d6fd5da3a2 HTTP/1.1" 200 None 2025-08-29 00:48:45,627 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:45,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/5934b1d040b20e93fd532ce2ba55e2d6fd5da3a2?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:48:45,829 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2025-08-29 00:48:46,081 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:46,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/20 HTTP/1.1" 200 None 2025-08-29 00:48:46,595 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:46,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/20/comments HTTP/1.1" 200 None 2025-08-29 00:48:47,092 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:47,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/76b47bafa934219c6487579e3df167219ea56fec HTTP/1.1" 200 None 2025-08-29 00:48:47,658 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:47,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/76b47bafa934219c6487579e3df167219ea56fec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:48:48,189 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:48,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/76b47bafa934219c6487579e3df167219ea56fec/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:48:48,689 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:48,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/76b47bafa934219c6487579e3df167219ea56fec HTTP/1.1" 200 None 2025-08-29 00:48:49,239 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:49,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/76b47bafa934219c6487579e3df167219ea56fec?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:48:49,458 [ scc.repo] DEBUG - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2025-08-29 00:48:49,710 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:49,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None 2025-08-29 00:48:50,213 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:50,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None 2025-08-29 00:48:50,739 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:51,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None 2025-08-29 00:48:51,332 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:51,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:48:51,846 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:52,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:48:52,414 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:52,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2025-08-29 00:48:52,949 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:53,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2025-08-29 00:48:53,476 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:53,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2025-08-29 00:48:54,001 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:54,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-08-29 00:48:54,549 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:54,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:48:55,036 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:55,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-08-29 00:48:55,526 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:55,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:48:55,728 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-08-29 00:48:55,728 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:48:55,728 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-08-29 00:48:55,728 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:55,728 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:55,731 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2025-08-29 00:48:55,733 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:48:55,734 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2025-08-29 00:48:55,737 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2025-08-29 00:48:55,740 [ scc.git] DEBUG Already up to date. 2025-08-29 00:48:55,740 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2025-08-29 00:48:56,031 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-08-29 00:48:56,032 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2025-08-29 00:48:56,036 [ scc.git] DEBUG Calling 'git fetch origin pull/20/head' 2025-08-29 00:48:56,320 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-08-29 00:48:56,320 [ scc.git] DEBUG * branch refs/pull/20/head -> FETCH_HEAD 2025-08-29 00:48:56,324 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2025-08-29 00:48:56,618 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-08-29 00:48:56,618 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2025-08-29 00:48:56,622 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:48:56,622 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:56,622 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:56,625 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-08-29 00:48:56,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:56,630 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-08-29 00:48:56,638 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2025-08-29 00:48:56,638 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2025-08-29 00:48:56,639 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-29 00:48:56,639 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-29 00:48:56,642 [ scc.git] DEBUG Calling 'git reset --hard 8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2025-08-29 00:48:56,646 [ scc.git] DEBUG HEAD is now at 8f3c313 Merge pull request #17 from jburel/build 2025-08-29 00:48:56,649 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:56,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:48:56,866 [ scc.git] DEBUG Calling 'git merge-base 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-08-29 00:48:56,870 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2025-08-29 00:48:56,873 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#519](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2025-08-29 00:48:56,875 [ scc.config] DEBUG Found github.token 2025-08-29 00:48:56,875 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2025-08-29 00:48:56,875 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...76b47bafa934219c6487579e3df167219ea56fec' 2025-08-29 00:48:56,878 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:56,880 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 20 (Use zarr_format=2 for .zarray and chunk endpoints) 76b47bafa934219c6487579e3df167219ea56fec' 2025-08-29 00:48:56,888 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:48:56,891 [ scc.git] DEBUG omero_web_zarr/views.py | 3 ++- 2025-08-29 00:48:56,891 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 1 deletion(-) 2025-08-29 00:48:57,119 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:57,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:48:57,307 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5934b1d040b20e93fd532ce2ba55e2d6fd5da3a2' 2025-08-29 00:48:57,311 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:57,313 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) 5934b1d040b20e93fd532ce2ba55e2d6fd5da3a2' 2025-08-29 00:48:57,322 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2025-08-29 00:48:57,323 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:48:57,327 [ scc.git] DEBUG README.rst | 3 + 2025-08-29 00:48:57,327 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 299 +++++++++++++++++++++ 2025-08-29 00:48:57,327 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2025-08-29 00:48:57,327 [ scc.git] DEBUG omero_web_zarr/views.py | 41 ++- 2025-08-29 00:48:57,327 [ scc.git] DEBUG setup.py | 5 +- 2025-08-29 00:48:57,327 [ scc.git] DEBUG 5 files changed, 348 insertions(+), 2 deletions(-) 2025-08-29 00:48:57,327 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2025-08-29 00:48:57,559 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:57,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:48:57,749 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:48:57,792 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:57,792 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:57,794 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:48:57,834 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:48:57,838 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fda0c63e490> has no local changes 2025-08-29 00:48:57,838 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Merged PRs: - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#519 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/)' 2025-08-29 00:48:57,845 [ scc.git] DEBUG [detached HEAD 5996e80] merge master -Dorg -Ssuccess-only 2025-08-29 00:48:57,845 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:48:57,846 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:48:58,001 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:58,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2025-08-29 00:48:58,216 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:48:58,216 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-08-29 00:48:58,216 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:58,216 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:58,219 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:48:58,221 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:48:58,221 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:48:58,224 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:48:58,227 [ scc.git] DEBUG Already up to date. 2025-08-29 00:48:58,227 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:48:58,227 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:58,227 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:58,230 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:48:58,269 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:58,269 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:58,271 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:48:58,311 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:48:58,315 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fda0c62e8d0> has no local changes 2025-08-29 00:48:58,315 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#519 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/)' 2025-08-29 00:48:58,321 [ scc.git] DEBUG [detached HEAD d9a6f93] merge master -Dorg -Ssuccess-only 2025-08-29 00:48:58,321 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:48:58,321 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:48:58,468 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:58,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2025-08-29 00:48:58,691 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:48:58,691 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-08-29 00:48:58,691 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:58,691 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:58,694 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:48:58,696 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:48:58,696 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:48:58,699 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:48:58,702 [ scc.git] DEBUG Already up to date. 2025-08-29 00:48:58,702 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:48:58,702 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:58,702 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:58,704 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:48:58,743 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:48:58,743 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:48:58,745 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:48:58,785 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:48:58,789 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fda0c688690> has no local changes 2025-08-29 00:48:58,789 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#519 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/)' 2025-08-29 00:48:58,795 [ scc.git] DEBUG [detached HEAD a6c4c80] merge master -Dorg -Ssuccess-only 2025-08-29 00:48:58,796 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:48:58,796 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:48:58,943 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:59,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2025-08-29 00:48:59,543 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:48:59,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2025-08-29 00:49:00,080 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:00,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2025-08-29 00:49:00,565 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:00,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-08-29 00:49:01,164 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:01,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:49:02,016 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:02,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-08-29 00:49:02,967 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:03,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:49:03,185 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2025-08-29 00:49:03,185 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:49:03,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-08-29 00:49:03,185 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:49:03,185 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:49:03,188 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:49:03,190 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:49:03,190 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:49:03,193 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:49:03,196 [ scc.git] DEBUG Already up to date. 2025-08-29 00:49:03,197 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2025-08-29 00:49:03,477 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2025-08-29 00:49:03,477 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2025-08-29 00:49:03,481 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:49:03,481 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:49:03,481 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:49:03,484 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-08-29 00:49:03,487 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:49:03,489 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-08-29 00:49:03,498 [ scc.git] DEBUG Auto-merging Dockerfile 2025-08-29 00:49:03,498 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2025-08-29 00:49:03,498 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-29 00:49:03,499 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-29 00:49:03,502 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-08-29 00:49:03,507 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-08-29 00:49:03,509 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:03,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:49:03,702 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-08-29 00:49:03,705 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-08-29 00:49:03,708 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#519](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2025-08-29 00:49:03,710 [ scc.config] DEBUG Found github.token 2025-08-29 00:49:03,710 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2025-08-29 00:49:03,710 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:49:03,751 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:49:03,751 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:49:03,754 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:49:03,796 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:49:03,800 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fda0c6cec90> has no local changes 2025-08-29 00:49:03,800 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#519 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/)' 2025-08-29 00:49:03,807 [ scc.git] DEBUG [detached HEAD 0648c33] merge master -Dorg -Ssuccess-only 2025-08-29 00:49:03,807 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:49:03,807 [ scc.git] INFO Overriding base-branch from master to develop 2025-08-29 00:49:03,807 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:49:03,954 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:04,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-08-29 00:49:04,509 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:04,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-08-29 00:49:05,080 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:05,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-08-29 00:49:05,592 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:05,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-08-29 00:49:06,115 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:06,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:49:06,705 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:06,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:49:07,221 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:07,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-08-29 00:49:07,717 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:07,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:49:07,920 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-08-29 00:49:08,172 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:08,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-08-29 00:49:08,660 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:08,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-08-29 00:49:09,166 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:09,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-08-29 00:49:09,705 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:09,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:49:10,201 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:10,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-08-29 00:49:10,716 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:10,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:49:10,921 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-08-29 00:49:11,172 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:11,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-08-29 00:49:11,742 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:12,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-08-29 00:49:12,267 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:12,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-08-29 00:49:12,794 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:13,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-08-29 00:49:13,067 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:49:13,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-08-29 00:49:13,067 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:49:13,067 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:49:13,070 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-08-29 00:49:13,072 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:49:13,073 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-08-29 00:49:13,076 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-08-29 00:49:13,087 [ scc.git] DEBUG Updating 4b4c755..573db34 2025-08-29 00:49:13,318 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:13,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2025-08-29 00:49:14,134 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:14,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2025-08-29 00:49:14,650 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-08-29 00:49:14,954 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-08-29 00:49:14,954 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-08-29 00:49:14,958 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-08-29 00:49:15,252 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-08-29 00:49:15,252 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-08-29 00:49:15,257 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:49:15,257 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:49:15,257 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:49:15,259 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-29 00:49:15,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:49:15,268 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-29 00:49:15,279 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-08-29 00:49:15,280 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-29 00:49:15,280 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-29 00:49:15,282 [ scc.git] DEBUG Calling 'git reset --hard 573db340d5d1429fa17c7e486206948412a7c150' 2025-08-29 00:49:15,287 [ scc.git] DEBUG HEAD is now at 573db34 Bump version: 5.9.1 → 5.9.2.dev0 2025-08-29 00:49:15,289 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:15,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:49:15,484 [ scc.git] DEBUG Calling 'git merge-base 573db340d5d1429fa17c7e486206948412a7c150 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-29 00:49:15,490 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..573db340d5d1429fa17c7e486206948412a7c150' 2025-08-29 00:49:15,494 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#519](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-08-29 00:49:15,496 [ scc.config] DEBUG Found github.token 2025-08-29 00:49:15,496 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-08-29 00:49:15,496 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-08-29 00:49:15,501 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:49:15,504 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-08-29 00:49:15,514 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:49:15,518 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-08-29 00:49:15,518 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-08-29 00:49:15,736 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:15,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:49:15,946 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:49:15,988 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:49:15,988 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:49:15,990 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:49:16,032 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:49:16,036 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fda0c6b8e50> has no local changes 2025-08-29 00:49:16,036 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Updating 4b4c755..573db34 Previously merged: - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#519 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/)' 2025-08-29 00:49:16,043 [ scc.git] DEBUG [detached HEAD 4184c4c] merge master -Dorg -Ssuccess-only 2025-08-29 00:49:16,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:49:16,043 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:49:16,122 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2025-08-29 00:49:16,199 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:16,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:49:16,389 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2025-08-29 00:49:16,391 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2025-08-29 00:49:16,637 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:16,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:49:16,851 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2025-08-29 00:49:16,853 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2025-08-29 00:49:17,099 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:17,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:49:17,390 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2025-08-29 00:49:17,392 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2025-08-29 00:49:17,638 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:17,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:49:17,970 [ scc.config] DEBUG Found submodule.omero-figure.url 2025-08-29 00:49:18,215 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:18,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:49:18,428 [ scc.config] DEBUG Found submodule.omero-figure.branch 2025-08-29 00:49:18,429 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2025-08-29 00:49:18,675 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:18,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:49:18,865 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2025-08-29 00:49:18,867 [ scc.config] DEBUG Found submodule.omero-gallery.url 2025-08-29 00:49:19,112 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:19,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:49:19,312 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2025-08-29 00:49:19,314 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2025-08-29 00:49:19,560 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:19,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:49:19,752 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2025-08-29 00:49:19,754 [ scc.config] DEBUG Found submodule.omero-mapr.url 2025-08-29 00:49:19,999 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:20,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:49:20,194 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2025-08-29 00:49:20,196 [ scc.config] DEBUG Found submodule.omero-metadata.url 2025-08-29 00:49:20,441 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:20,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:49:20,651 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2025-08-29 00:49:20,654 [ scc.config] DEBUG Found submodule.omero-parade.url 2025-08-29 00:49:20,899 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:21,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:49:21,115 [ scc.config] DEBUG Found submodule.omero-parade.branch 2025-08-29 00:49:21,117 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2025-08-29 00:49:21,362 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:21,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:49:21,567 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2025-08-29 00:49:21,569 [ scc.config] DEBUG Found submodule.omero-rois.url 2025-08-29 00:49:21,814 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:22,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:49:22,018 [ scc.config] DEBUG Found submodule.omero-signup.url 2025-08-29 00:49:22,264 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:22,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:49:22,473 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2025-08-29 00:49:22,719 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:22,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:49:22,913 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2025-08-29 00:49:22,915 [ scc.config] DEBUG Found submodule.omero-upload.url 2025-08-29 00:49:23,161 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:23,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:49:23,364 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2025-08-29 00:49:23,609 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:23,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:49:23,809 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2025-08-29 00:49:24,055 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:24,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:49:24,269 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2025-08-29 00:49:24,271 [ scc.config] DEBUG Found submodule.omero-weberror.url 2025-08-29 00:49:24,516 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:24,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:49:24,720 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2025-08-29 00:49:24,722 [ scc.config] DEBUG Found submodule.omero-webtest.url 2025-08-29 00:49:24,967 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:25,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:49:25,191 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2025-08-29 00:49:25,193 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2025-08-29 00:49:25,438 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:25,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:49:25,629 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2025-08-29 00:49:25,631 [ scc.config] DEBUG Found submodule.scripts.url 2025-08-29 00:49:25,877 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:49:26,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:49:26,096 [ scc.config] DEBUG Found submodule.scripts.branch 2025-08-29 00:49:26,096 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:49:26,186 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fda11ff8490> has local changes 2025-08-29 00:49:26,186 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Repository: ome/omero-cli-render Excluded PRs: - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 69 dominikl 'Fix help text for impo/export commands' - PR 71 dominikl 'Escape slash character in image names' Repository: ome/omero-cli-zarr Excluded PRs: - PR 174 will-moore 'Skip wells' (stage: draft) - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..f7eea7c Previously merged: - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 180 will-moore 'Register command' Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) - PR 619 will-moore 'OME-Zarr support' (stage: draft) - PR 543 will-moore 'Plate well labels' (exclude comment) Updating 9cc36cde..d2c6f5bc Previously merged: - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 600 Rdornier 'Label on rois' - PR 605 Tom-TBT 'Colorbar feature' - PR 610 will-moore 'Add docs/contributing.rst' - PR 612 will-moore 'Script version' - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7' Conflicting PRs (not included): - PR 616 Rdornier 'Fix labels around border' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 637 Rdornier 'Fix scalebar position' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..bb94cf8 Previously merged: - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' - PR 76 will-moore 'Run cli deps' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Merged PRs: - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Updating 4b4c755..573db34 Previously merged: - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#519 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/519/)' 2025-08-29 00:49:26,199 [ scc.git] DEBUG [detached HEAD 38c851e] merge master -Dorg -Ssuccess-only 2025-08-29 00:49:26,199 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2025-08-29 00:49:26,200 [ scc.merge] INFO Repository: ome/omero-plugins 2025-08-29 00:49:26,200 [ scc.merge] INFO Already up to date. 2025-08-29 00:49:26,200 [ scc.merge] INFO 2025-08-29 00:49:26,200 [ scc.merge] INFO Merged PRs: 2025-08-29 00:49:26,200 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-08-29 00:49:26,200 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-08-29 00:49:26,200 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-08-29 00:49:26,200 [ scc.merge] INFO 2025-08-29 00:49:26,200 [ scc.merge] INFO Repository: ome/minimal-omero-client 2025-08-29 00:49:26,200 [ scc.merge] INFO Already up to date. 2025-08-29 00:49:26,200 [ scc.merge] INFO 2025-08-29 00:49:26,200 [ scc.merge] INFO 2025-08-29 00:49:26,200 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2025-08-29 00:49:26,200 [ scc.merge] INFO Excluded PRs: 2025-08-29 00:49:26,200 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2025-08-29 00:49:26,200 [ scc.merge] INFO Already up to date. 2025-08-29 00:49:26,200 [ scc.merge] INFO 2025-08-29 00:49:26,200 [ scc.merge] INFO 2025-08-29 00:49:26,200 [ scc.merge] INFO Repository: ome/omero-cli-render 2025-08-29 00:49:26,200 [ scc.merge] INFO Excluded PRs: 2025-08-29 00:49:26,200 [ scc.merge] INFO - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) 2025-08-29 00:49:26,200 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2025-08-29 00:49:26,200 [ scc.merge] INFO Already up to date. 2025-08-29 00:49:26,200 [ scc.merge] INFO 2025-08-29 00:49:26,200 [ scc.merge] INFO Merged PRs: 2025-08-29 00:49:26,200 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2025-08-29 00:49:26,200 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2025-08-29 00:49:26,200 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2025-08-29 00:49:26,200 [ scc.merge] INFO 2025-08-29 00:49:26,200 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2025-08-29 00:49:26,200 [ scc.merge] INFO Excluded PRs: 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' (stage: draft) 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (exclude comment) 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2025-08-29 00:49:26,201 [ scc.merge] INFO Updating 11d3587..f7eea7c 2025-08-29 00:49:26,201 [ scc.merge] INFO Previously merged: 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-29 00:49:26,201 [ scc.merge] INFO 2025-08-29 00:49:26,201 [ scc.merge] INFO Merged PRs: 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 180 will-moore 'Register command' 2025-08-29 00:49:26,201 [ scc.merge] INFO 2025-08-29 00:49:26,201 [ scc.merge] INFO Repository: ome/omero-figure 2025-08-29 00:49:26,201 [ scc.merge] INFO Excluded PRs: 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft) 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2025-08-29 00:49:26,201 [ scc.merge] INFO Updating 9cc36cde..d2c6f5bc 2025-08-29 00:49:26,201 [ scc.merge] INFO Previously merged: 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-29 00:49:26,201 [ scc.merge] INFO 2025-08-29 00:49:26,201 [ scc.merge] INFO Merged PRs: 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2025-08-29 00:49:26,201 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2025-08-29 00:49:26,202 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2025-08-29 00:49:26,202 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2025-08-29 00:49:26,202 [ scc.merge] INFO - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7' 2025-08-29 00:49:26,202 [ scc.merge] INFO 2025-08-29 00:49:26,202 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-29 00:49:26,202 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2025-08-29 00:49:26,202 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2025-08-29 00:49:26,202 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2025-08-29 00:49:26,202 [ scc.merge] INFO 2025-08-29 00:49:26,202 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2025-08-29 00:49:26,202 [ scc.merge] INFO Already up to date. 2025-08-29 00:49:26,202 [ scc.merge] INFO 2025-08-29 00:49:26,202 [ scc.merge] INFO Merged PRs: 2025-08-29 00:49:26,202 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2025-08-29 00:49:26,202 [ scc.merge] INFO 2025-08-29 00:49:26,202 [ scc.merge] INFO Repository: ome/omero-gallery 2025-08-29 00:49:26,202 [ scc.merge] INFO Already up to date. 2025-08-29 00:49:26,202 [ scc.merge] INFO 2025-08-29 00:49:26,202 [ scc.merge] INFO Merged PRs: 2025-08-29 00:49:26,202 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-08-29 00:49:26,202 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-08-29 00:49:26,202 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-08-29 00:49:26,202 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-08-29 00:49:26,202 [ scc.merge] INFO 2025-08-29 00:49:26,202 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-29 00:49:26,202 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-08-29 00:49:26,202 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-08-29 00:49:26,202 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2025-08-29 00:49:26,202 [ scc.merge] INFO 2025-08-29 00:49:26,202 [ scc.merge] INFO Repository: ome/omero-iviewer 2025-08-29 00:49:26,202 [ scc.merge] INFO Excluded PRs: 2025-08-29 00:49:26,202 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft) 2025-08-29 00:49:26,202 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2025-08-29 00:49:26,202 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2025-08-29 00:49:26,202 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2025-08-29 00:49:26,202 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure) 2025-08-29 00:49:26,202 [ scc.merge] INFO Updating 7a798ce..bb94cf8 2025-08-29 00:49:26,202 [ scc.merge] INFO Previously merged: 2025-08-29 00:49:26,202 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-29 00:49:26,203 [ scc.merge] INFO 2025-08-29 00:49:26,203 [ scc.merge] INFO Merged PRs: 2025-08-29 00:49:26,203 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2025-08-29 00:49:26,203 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2025-08-29 00:49:26,203 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2025-08-29 00:49:26,203 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-08-29 00:49:26,203 [ scc.merge] INFO 2025-08-29 00:49:26,203 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-29 00:49:26,203 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2025-08-29 00:49:26,203 [ scc.merge] INFO 2025-08-29 00:49:26,203 [ scc.merge] INFO Repository: ome/omero-mapr 2025-08-29 00:49:26,203 [ scc.merge] INFO Excluded PRs: 2025-08-29 00:49:26,203 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2025-08-29 00:49:26,203 [ scc.merge] INFO Already up to date. 2025-08-29 00:49:26,203 [ scc.merge] INFO 2025-08-29 00:49:26,203 [ scc.merge] INFO Merged PRs: 2025-08-29 00:49:26,203 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2025-08-29 00:49:26,203 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-29 00:49:26,203 [ scc.merge] INFO 2025-08-29 00:49:26,203 [ scc.merge] INFO Repository: ome/omero-metadata 2025-08-29 00:49:26,203 [ scc.merge] INFO Updating 3cd120c..55060a2 2025-08-29 00:49:26,203 [ scc.merge] INFO Previously merged: 2025-08-29 00:49:26,203 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-29 00:49:26,203 [ scc.merge] INFO 2025-08-29 00:49:26,203 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-29 00:49:26,203 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-08-29 00:49:26,203 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-08-29 00:49:26,203 [ scc.merge] INFO 2025-08-29 00:49:26,203 [ scc.merge] INFO Repository: ome/omero-parade 2025-08-29 00:49:26,203 [ scc.merge] INFO Excluded PRs: 2025-08-29 00:49:26,203 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2025-08-29 00:49:26,203 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2025-08-29 00:49:26,203 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2025-08-29 00:49:26,203 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2025-08-29 00:49:26,203 [ scc.merge] INFO Already up to date. 2025-08-29 00:49:26,203 [ scc.merge] INFO 2025-08-29 00:49:26,203 [ scc.merge] INFO Merged PRs: 2025-08-29 00:49:26,203 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2025-08-29 00:49:26,203 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2025-08-29 00:49:26,204 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-29 00:49:26,204 [ scc.merge] INFO 2025-08-29 00:49:26,204 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2025-08-29 00:49:26,204 [ scc.merge] INFO Already up to date. 2025-08-29 00:49:26,204 [ scc.merge] INFO 2025-08-29 00:49:26,204 [ scc.merge] INFO 2025-08-29 00:49:26,204 [ scc.merge] INFO Repository: ome/omero-rois 2025-08-29 00:49:26,204 [ scc.merge] INFO Excluded PRs: 2025-08-29 00:49:26,204 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-08-29 00:49:26,204 [ scc.merge] INFO Already up to date. 2025-08-29 00:49:26,204 [ scc.merge] INFO 2025-08-29 00:49:26,204 [ scc.merge] INFO Merged PRs: 2025-08-29 00:49:26,204 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions' 2025-08-29 00:49:26,204 [ scc.merge] INFO 2025-08-29 00:49:26,204 [ scc.merge] INFO Repository: ome/omero-signup 2025-08-29 00:49:26,204 [ scc.merge] INFO Already up to date. 2025-08-29 00:49:26,204 [ scc.merge] INFO 2025-08-29 00:49:26,204 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-29 00:49:26,204 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2025-08-29 00:49:26,204 [ scc.merge] INFO 2025-08-29 00:49:26,204 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2025-08-29 00:49:26,204 [ scc.merge] INFO Excluded PRs: 2025-08-29 00:49:26,204 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2025-08-29 00:49:26,204 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2025-08-29 00:49:26,204 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) 2025-08-29 00:49:26,204 [ scc.merge] INFO Already up to date. 2025-08-29 00:49:26,204 [ scc.merge] INFO 2025-08-29 00:49:26,204 [ scc.merge] INFO Merged PRs: 2025-08-29 00:49:26,204 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-08-29 00:49:26,204 [ scc.merge] INFO - PR 76 will-moore 'Run cli deps' 2025-08-29 00:49:26,204 [ scc.merge] INFO 2025-08-29 00:49:26,204 [ scc.merge] INFO Repository: ome/omero-upload 2025-08-29 00:49:26,204 [ scc.merge] INFO Already up to date. 2025-08-29 00:49:26,204 [ scc.merge] INFO 2025-08-29 00:49:26,204 [ scc.merge] INFO 2025-08-29 00:49:26,204 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2025-08-29 00:49:26,204 [ scc.merge] INFO Updating deab817..160d894 2025-08-29 00:49:26,205 [ scc.merge] INFO Previously merged: 2025-08-29 00:49:26,205 [ scc.merge] INFO - PR 20 jburel 'Build' 2025-08-29 00:49:26,205 [ scc.merge] INFO 2025-08-29 00:49:26,205 [ scc.merge] INFO 2025-08-29 00:49:26,205 [ scc.merge] INFO Repository: ome/omero-web-zarr 2025-08-29 00:49:26,205 [ scc.merge] INFO Excluded PRs: 2025-08-29 00:49:26,205 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure) 2025-08-29 00:49:26,205 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2025-08-29 00:49:26,205 [ scc.merge] INFO Already up to date. 2025-08-29 00:49:26,205 [ scc.merge] INFO 2025-08-29 00:49:26,205 [ scc.merge] INFO Merged PRs: 2025-08-29 00:49:26,205 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2025-08-29 00:49:26,205 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2025-08-29 00:49:26,205 [ scc.merge] INFO 2025-08-29 00:49:26,205 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-29 00:49:26,205 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-08-29 00:49:26,205 [ scc.merge] INFO 2025-08-29 00:49:26,205 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2025-08-29 00:49:26,205 [ scc.merge] INFO Already up to date. 2025-08-29 00:49:26,205 [ scc.merge] INFO 2025-08-29 00:49:26,205 [ scc.merge] INFO 2025-08-29 00:49:26,205 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2025-08-29 00:49:26,205 [ scc.merge] INFO Already up to date. 2025-08-29 00:49:26,205 [ scc.merge] INFO 2025-08-29 00:49:26,205 [ scc.merge] INFO 2025-08-29 00:49:26,205 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2025-08-29 00:49:26,205 [ scc.merge] INFO Already up to date. 2025-08-29 00:49:26,205 [ scc.merge] INFO 2025-08-29 00:49:26,205 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-29 00:49:26,205 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2025-08-29 00:49:26,205 [ scc.merge] INFO 2025-08-29 00:49:26,205 [ scc.merge] INFO Repository: ome/scripts 2025-08-29 00:49:26,205 [ scc.merge] INFO Excluded PRs: 2025-08-29 00:49:26,205 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-08-29 00:49:26,205 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-08-29 00:49:26,205 [ scc.merge] INFO Updating 4b4c755..573db34 2025-08-29 00:49:26,205 [ scc.merge] INFO Previously merged: 2025-08-29 00:49:26,205 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2025-08-29 00:49:26,205 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2025-08-29 00:49:26,206 [ scc.merge] INFO 2025-08-29 00:49:26,206 [ scc.merge] INFO Merged PRs: 2025-08-29 00:49:26,206 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-08-29 00:49:26,206 [ scc.merge] INFO 2025-08-29 00:49:26,206 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-29 00:49:26,206 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-08-29 00:49:26,206 [ scc.merge] INFO 2025-08-29 00:49:26,206 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-08-29 00:49:26,206 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:49:26,208 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-08-29 00:49:26,208 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:49:26,210 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:49:26,210 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-08-29 00:49:26,210 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:49:26,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:49:26,213 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-08-29 00:49:26,213 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:49:26,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:49:26,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-08-29 00:49:26,215 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:49:26,217 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:49:26,217 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-08-29 00:49:26,217 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:49:26,219 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:49:26,219 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-08-29 00:49:26,220 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:49:26,222 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:49:26,222 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-08-29 00:49:26,222 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:49:26,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:49:26,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-08-29 00:49:26,224 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:49:26,226 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:49:26,226 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-08-29 00:49:26,226 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:49:26,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:49:26,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-08-29 00:49:26,229 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:49:26,231 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:49:26,231 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-08-29 00:49:26,231 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:49:26,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:49:26,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-08-29 00:49:26,233 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:49:26,236 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:49:26,236 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-08-29 00:49:26,236 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:49:26,238 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:49:26,238 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-08-29 00:49:26,238 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:49:26,240 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:49:26,240 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-08-29 00:49:26,240 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:49:26,242 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:49:26,242 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-08-29 00:49:26,242 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:49:26,245 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:49:26,245 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-08-29 00:49:26,245 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:49:26,247 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:49:26,247 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-08-29 00:49:26,247 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:49:26,249 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:49:26,249 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-08-29 00:49:26,249 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:49:26,252 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:49:26,252 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-08-29 00:49:26,252 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:49:26,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:49:26,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-08-29 00:49:26,254 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:49:26,256 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-29 00:49:26,256 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-08-29 00:49:26,256 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:49:26,258 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 999d02e] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD 04ba79a] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-08-29 00:50:16,347 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-08-29 00:50:26,482 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-08-29 00:50:29,213 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-08-29 00:50:34,370 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-08-29 00:51:14,527 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS