![[Jenkins]](/jenkins/static/03a0bb70/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 10 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 0f0fc56a61fb33d243b6c42580a3c7392b2fab94 (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 0f0fc56a61fb33d243b6c42580a3c7392b2fab94 # timeout=10 Commit message: "Merge pull request #354 from ome/dependabot/submodules/scripts-2078ac7" > git rev-list --no-walk 6da9d2fffc1f3760e653ec62d8b0fd398b2a2813 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 7 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.0-py3-none-any.whl (2.1 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.0 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.2.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.31.0-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.10.0-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.5-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.6-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.2.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.21-py2.py3-none-any.whl.metadata (1.1 kB) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.2.0-py3-none-any.whl (350 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.31.0-py3-none-any.whl (62 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.10.0-py3-none-any.whl (33 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.2.2-py3-none-any.whl (163 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.5-cp39-abi3-manylinux_2_28_x86_64.whl (4.6 MB) Using cached idna-3.6-py3-none-any.whl (61 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.21-py2.py3-none-any.whl (118 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.2.0 PyYAML-6.0.1 certifi-2024.2.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.5 future-1.0.0 idna-3.6 pycparser-2.21 pyjwt-2.8.0 pynacl-1.5.0 requests-2.31.0 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.10.0 urllib3-1.26.18 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-03-21 00:39:15,224 [ scc.config] DEBUG Found github.token 2024-03-21 00:39:15,227 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-03-21 00:39:15,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:39:15,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:39:16,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-03-21 00:39:16,302 [ scc.gh] DEBUG 3127 remaining from 5000 (Reset at 01:03 2024-03-21 00:39:16,303 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-21 00:39:16,307 [ scc.git] DEBUG Check current status 2024-03-21 00:39:16,307 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-21 00:39:16,311 [ scc.git] DEBUG 0f0fc56 Merge pull request #354 from ome/dependabot/submodules/scripts-2078ac7 2024-03-21 00:39:16,311 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-21 00:39:16,358 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-03-21 00:39:16,361 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-03-21 00:39:16,364 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-03-21 00:39:16,367 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-03-21 00:39:16,370 [ scc.git] DEBUG 3b7ccfa865a44b0309b69c6dca34af2d12343a5d omero-figure (v6.2.0-1-g3b7ccfa8) 2024-03-21 00:39:16,373 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-03-21 00:39:16,376 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-03-21 00:39:16,422 [ scc.git] DEBUG a232ed07b982c17d7bb87f2d93a72c451ae836f3 omero-iviewer (v0.13.0-16-ga232ed0) 2024-03-21 00:39:16,426 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-03-21 00:39:16,429 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-03-21 00:39:16,432 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-03-21 00:39:16,434 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-03-21 00:39:16,437 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-03-21 00:39:16,440 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-03-21 00:39:16,445 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-03-21 00:39:16,449 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-03-21 00:39:16,451 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-03-21 00:39:16,454 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-03-21 00:39:16,457 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-03-21 00:39:16,460 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-03-21 00:39:16,462 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-03-21 00:39:16,466 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-03-21 00:39:16,470 [ scc.config] DEBUG Found remote.origin.url 2024-03-21 00:39:16,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-03-21 00:39:17,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-21 00:39:17,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-21 00:39:18,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-21 00:39:18,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-21 00:39:18,502 [ scc.git] DEBUG Resetting... 2024-03-21 00:39:18,502 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-03-21 00:39:18,512 [ scc.git] DEBUG HEAD is now at 0f0fc56 Merge pull request #354 from ome/dependabot/submodules/scripts-2078ac7 2024-03-21 00:39:18,512 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-03-21 00:39:18,617 [ scc.git] DEBUG Check current status 2024-03-21 00:39:18,617 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-21 00:39:18,622 [ scc.git] DEBUG 0f0fc56 Merge pull request #354 from ome/dependabot/submodules/scripts-2078ac7 2024-03-21 00:39:18,622 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-21 00:39:18,668 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-03-21 00:39:18,672 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-03-21 00:39:18,674 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-03-21 00:39:18,678 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-03-21 00:39:18,681 [ scc.git] DEBUG 3b7ccfa865a44b0309b69c6dca34af2d12343a5d omero-figure (v6.2.0-1-g3b7ccfa8) 2024-03-21 00:39:18,684 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-03-21 00:39:18,688 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-03-21 00:39:18,691 [ scc.git] DEBUG a232ed07b982c17d7bb87f2d93a72c451ae836f3 omero-iviewer (v0.13.0-16-ga232ed0) 2024-03-21 00:39:18,695 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-03-21 00:39:18,699 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-03-21 00:39:18,703 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-03-21 00:39:18,706 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-03-21 00:39:18,709 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-03-21 00:39:18,712 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-03-21 00:39:18,715 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-03-21 00:39:18,718 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-03-21 00:39:18,721 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-03-21 00:39:18,724 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-03-21 00:39:18,726 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-03-21 00:39:18,730 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-03-21 00:39:18,733 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-03-21 00:39:18,736 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-03-21 00:39:18,737 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-03-21 00:39:18,737 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-03-21 00:39:18,738 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-03-21 00:39:18,738 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-03-21 00:39:18,738 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-03-21 00:39:18,738 [ scc.repo] DEBUG ## PRs found: 2024-03-21 00:39:18,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-03-21 00:39:18,943 [ scc.repo] DEBUG ## Branches found: 2024-03-21 00:39:18,943 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:39:18,943 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:39:18,948 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-21 00:39:18,952 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-21 00:39:18,952 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-21 00:39:18,957 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-21 00:39:18,961 [ scc.git] DEBUG Already up to date. 2024-03-21 00:39:18,961 [ scc.git] DEBUG ## Unique users: [] 2024-03-21 00:39:18,961 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:39:18,961 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:39:18,964 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-21 00:39:19,020 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:39:19,020 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:39:19,025 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-21 00:39:19,394 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd8a2f451f0> has no local changes 2024-03-21 00:39:19,394 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Generated by OMERO-plugins-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/)' 2024-03-21 00:39:19,472 [ scc.git] DEBUG [detached HEAD 8dbd966] merge master -Dorg -Snone 2024-03-21 00:39:19,473 [ scc.merge] INFO Repository: ome/omero-plugins 2024-03-21 00:39:19,473 [ scc.merge] INFO Already up to date. 2024-03-21 00:39:19,473 [ scc.merge] INFO 2024-03-21 00:39:19,473 [ scc.merge] INFO 2024-03-21 00:39:19,473 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-03-21 00:39:19,473 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-03-21 00:39:28,952 [ scc.config] DEBUG Found github.token 2024-03-21 00:39:28,955 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-03-21 00:39:29,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:39:29,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:39:30,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-03-21 00:39:30,010 [ scc.gh] DEBUG 3119 remaining from 5000 (Reset at 01:03 2024-03-21 00:39:30,011 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-21 00:39:30,015 [ scc.git] DEBUG Check current status 2024-03-21 00:39:30,015 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-21 00:39:30,018 [ scc.git] DEBUG 8dbd966 merge master -Dorg -Snone 2024-03-21 00:39:30,019 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-21 00:39:30,071 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-03-21 00:39:30,074 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-03-21 00:39:30,076 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-03-21 00:39:30,079 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-03-21 00:39:30,083 [ scc.git] DEBUG 3b7ccfa865a44b0309b69c6dca34af2d12343a5d omero-figure (v6.2.0-1-g3b7ccfa8) 2024-03-21 00:39:30,086 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-03-21 00:39:30,089 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-03-21 00:39:30,092 [ scc.git] DEBUG a232ed07b982c17d7bb87f2d93a72c451ae836f3 omero-iviewer (v0.13.0-16-ga232ed0) 2024-03-21 00:39:30,095 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-03-21 00:39:30,098 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-03-21 00:39:30,101 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-03-21 00:39:30,104 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-03-21 00:39:30,107 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-03-21 00:39:30,110 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-03-21 00:39:30,113 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-03-21 00:39:30,116 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-03-21 00:39:30,118 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-03-21 00:39:30,121 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-03-21 00:39:30,124 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-03-21 00:39:30,126 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-03-21 00:39:30,129 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-03-21 00:39:30,133 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-03-21 00:39:30,138 [ scc.config] DEBUG Found remote.origin.url 2024-03-21 00:39:30,139 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-03-21 00:39:30,141 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-03-21 00:39:30,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-03-21 00:39:30,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-21 00:39:31,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-21 00:39:31,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-21 00:39:32,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-21 00:39:32,146 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:39:32,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-03-21 00:39:32,225 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-21 00:39:32,228 [ scc.git] DEBUG Check current status 2024-03-21 00:39:32,229 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-21 00:39:32,232 [ scc.git] DEBUG c9c839c Merge pull request #64 from jburel/gateway_5_8_2 2024-03-21 00:39:32,233 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-21 00:39:32,280 [ scc.config] DEBUG Found remote.origin.url 2024-03-21 00:39:32,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-03-21 00:39:33,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-21 00:39:33,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-21 00:39:33,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-21 00:39:34,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-21 00:39:34,338 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:39:34,378 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:39:34,379 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-03-21 00:39:34,379 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-21 00:39:34,383 [ scc.git] DEBUG Check current status 2024-03-21 00:39:34,383 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-21 00:39:34,387 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-03-21 00:39:34,387 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-21 00:39:34,430 [ scc.config] DEBUG Found remote.origin.url 2024-03-21 00:39:34,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-03-21 00:39:35,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-21 00:39:35,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-21 00:39:36,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-21 00:39:36,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-21 00:39:36,541 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:39:36,582 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:39:36,583 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-03-21 00:39:36,583 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-21 00:39:36,587 [ scc.git] DEBUG Check current status 2024-03-21 00:39:36,587 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-21 00:39:36,590 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-03-21 00:39:36,590 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-21 00:39:36,629 [ scc.config] DEBUG Found remote.origin.url 2024-03-21 00:39:37,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-03-21 00:39:37,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-21 00:39:37,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-21 00:39:38,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-21 00:39:38,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-21 00:39:38,693 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:39:38,734 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:39:38,735 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-03-21 00:39:38,735 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-21 00:39:38,739 [ scc.git] DEBUG Check current status 2024-03-21 00:39:38,739 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-21 00:39:38,742 [ scc.git] DEBUG 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-03-21 00:39:38,743 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-21 00:39:38,785 [ scc.config] DEBUG Found remote.origin.url 2024-03-21 00:39:39,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-03-21 00:39:39,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-21 00:39:40,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-21 00:39:40,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-21 00:39:40,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-21 00:39:40,878 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:39:40,919 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:39:40,921 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-03-21 00:39:40,921 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-21 00:39:40,925 [ scc.git] DEBUG Check current status 2024-03-21 00:39:40,926 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-21 00:39:40,949 [ scc.git] DEBUG 3b7ccfa8 Bump version: 6.2.0 → 6.2.1.dev0 2024-03-21 00:39:40,949 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-21 00:39:40,991 [ scc.config] DEBUG Found remote.origin.url 2024-03-21 00:39:41,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-03-21 00:39:41,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-21 00:39:42,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-21 00:39:42,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-21 00:39:43,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-21 00:39:43,077 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:39:43,118 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:39:43,119 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-03-21 00:39:43,119 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-21 00:39:43,123 [ scc.git] DEBUG Check current status 2024-03-21 00:39:43,124 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-21 00:39:43,127 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-03-21 00:39:43,128 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-21 00:39:43,173 [ scc.config] DEBUG Found remote.origin.url 2024-03-21 00:39:43,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-03-21 00:39:44,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-21 00:39:44,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-21 00:39:44,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-21 00:39:45,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-21 00:39:45,255 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:39:45,295 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:39:45,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-03-21 00:39:45,296 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-21 00:39:45,301 [ scc.git] DEBUG Check current status 2024-03-21 00:39:45,301 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-21 00:39:45,306 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-03-21 00:39:45,307 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-21 00:39:45,351 [ scc.config] DEBUG Found remote.origin.url 2024-03-21 00:39:45,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-03-21 00:39:46,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-21 00:39:46,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-21 00:39:47,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-21 00:39:47,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-21 00:39:47,449 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:39:47,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:39:47,489 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-03-21 00:39:47,489 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-21 00:39:47,493 [ scc.git] DEBUG Check current status 2024-03-21 00:39:47,494 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-21 00:39:47,497 [ scc.git] DEBUG a232ed0 Merge pull request #466 from ome/dependabot/npm_and_yarn/follow-redirects-1.15.6 2024-03-21 00:39:47,498 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-21 00:39:47,541 [ scc.config] DEBUG Found remote.origin.url 2024-03-21 00:39:47,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-03-21 00:39:48,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-21 00:39:48,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-21 00:39:49,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-21 00:39:49,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-21 00:39:49,754 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:39:49,796 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:39:49,797 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-03-21 00:39:49,797 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-21 00:39:49,802 [ scc.git] DEBUG Check current status 2024-03-21 00:39:49,802 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-21 00:39:49,807 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-03-21 00:39:49,807 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-21 00:39:49,852 [ scc.config] DEBUG Found remote.origin.url 2024-03-21 00:39:50,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-03-21 00:39:50,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-21 00:39:51,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-21 00:39:51,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-21 00:39:51,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-21 00:39:51,932 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:39:51,974 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:39:51,975 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-03-21 00:39:51,975 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-21 00:39:51,980 [ scc.git] DEBUG Check current status 2024-03-21 00:39:51,980 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-21 00:39:51,984 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-03-21 00:39:51,984 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-21 00:39:52,027 [ scc.config] DEBUG Found remote.origin.url 2024-03-21 00:39:52,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-03-21 00:39:52,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-21 00:39:53,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-21 00:39:53,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-21 00:39:54,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-21 00:39:54,067 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:39:54,105 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:39:54,106 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-03-21 00:39:54,106 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-21 00:39:54,110 [ scc.git] DEBUG Check current status 2024-03-21 00:39:54,110 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-21 00:39:54,114 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-03-21 00:39:54,115 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-21 00:39:54,162 [ scc.config] DEBUG Found remote.origin.url 2024-03-21 00:39:54,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-03-21 00:39:54,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-21 00:39:55,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-21 00:39:55,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-21 00:39:56,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-21 00:39:56,212 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:39:56,264 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:39:56,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-03-21 00:39:56,265 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-21 00:39:56,270 [ scc.git] DEBUG Check current status 2024-03-21 00:39:56,270 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-21 00:39:56,274 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-03-21 00:39:56,274 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-21 00:39:56,320 [ scc.config] DEBUG Found remote.origin.url 2024-03-21 00:39:56,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-03-21 00:39:57,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-21 00:39:57,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-21 00:39:57,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-21 00:39:58,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-21 00:39:58,388 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:39:58,431 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:39:58,432 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-03-21 00:39:58,432 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-21 00:39:58,436 [ scc.git] DEBUG Check current status 2024-03-21 00:39:58,437 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-21 00:39:58,440 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-03-21 00:39:58,441 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-21 00:39:58,483 [ scc.config] DEBUG Found remote.origin.url 2024-03-21 00:39:58,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-03-21 00:39:59,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-21 00:39:59,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-21 00:40:00,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-21 00:40:00,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-21 00:40:00,559 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:40:00,597 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:40:00,598 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-03-21 00:40:00,598 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-21 00:40:00,603 [ scc.git] DEBUG Check current status 2024-03-21 00:40:00,603 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-21 00:40:00,607 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-03-21 00:40:00,608 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-21 00:40:00,655 [ scc.config] DEBUG Found remote.origin.url 2024-03-21 00:40:01,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-03-21 00:40:01,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-21 00:40:01,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-21 00:40:02,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-21 00:40:02,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-21 00:40:02,721 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:40:02,758 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:40:02,759 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-03-21 00:40:02,759 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-21 00:40:02,763 [ scc.git] DEBUG Check current status 2024-03-21 00:40:02,763 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-21 00:40:02,768 [ scc.git] DEBUG a0148a6 Merge pull request #68 from sbesson/pytest 2024-03-21 00:40:02,769 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-21 00:40:02,818 [ scc.config] DEBUG Found remote.origin.url 2024-03-21 00:40:03,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-03-21 00:40:03,147 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-03-21 00:40:03,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-03-21 00:40:03,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-21 00:40:04,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-21 00:40:04,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-21 00:40:05,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-21 00:40:05,098 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:40:05,143 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:40:05,145 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-03-21 00:40:05,145 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-21 00:40:05,149 [ scc.git] DEBUG Check current status 2024-03-21 00:40:05,149 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-21 00:40:05,153 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-03-21 00:40:05,153 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-21 00:40:05,198 [ scc.config] DEBUG Found remote.origin.url 2024-03-21 00:40:05,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-03-21 00:40:06,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-21 00:40:06,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-21 00:40:06,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-21 00:40:07,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-21 00:40:07,244 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:40:07,284 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:40:07,285 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-03-21 00:40:07,285 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-21 00:40:07,289 [ scc.git] DEBUG Check current status 2024-03-21 00:40:07,289 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-21 00:40:07,294 [ scc.git] DEBUG deab817 update setup-python to v4 2024-03-21 00:40:07,294 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-21 00:40:07,337 [ scc.config] DEBUG Found remote.origin.url 2024-03-21 00:40:07,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-03-21 00:40:08,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-21 00:40:08,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-21 00:40:09,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-21 00:40:09,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-21 00:40:09,444 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:40:09,485 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:40:09,485 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-03-21 00:40:09,486 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-21 00:40:09,490 [ scc.git] DEBUG Check current status 2024-03-21 00:40:09,490 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-21 00:40:09,494 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-03-21 00:40:09,494 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-21 00:40:09,537 [ scc.config] DEBUG Found remote.origin.url 2024-03-21 00:40:09,538 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-03-21 00:40:09,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-03-21 00:40:10,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-21 00:40:10,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-21 00:40:11,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-21 00:40:11,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-21 00:40:11,606 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:40:11,650 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:40:11,650 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-03-21 00:40:11,651 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-21 00:40:11,655 [ scc.git] DEBUG Check current status 2024-03-21 00:40:11,656 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-21 00:40:11,660 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-03-21 00:40:11,661 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-21 00:40:11,706 [ scc.config] DEBUG Found remote.origin.url 2024-03-21 00:40:12,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-03-21 00:40:12,025 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-03-21 00:40:12,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-03-21 00:40:12,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-21 00:40:13,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-21 00:40:13,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-21 00:40:13,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-21 00:40:13,949 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:40:13,990 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:40:13,991 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-03-21 00:40:13,991 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-21 00:40:13,996 [ scc.git] DEBUG Check current status 2024-03-21 00:40:13,996 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-21 00:40:14,001 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-03-21 00:40:14,002 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-21 00:40:14,054 [ scc.config] DEBUG Found remote.origin.url 2024-03-21 00:40:14,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-03-21 00:40:14,372 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-03-21 00:40:14,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-03-21 00:40:15,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-21 00:40:15,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-21 00:40:15,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-21 00:40:16,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-21 00:40:16,297 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:40:16,338 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:40:16,339 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-03-21 00:40:16,339 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-21 00:40:16,345 [ scc.git] DEBUG Check current status 2024-03-21 00:40:16,345 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-21 00:40:16,351 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-03-21 00:40:16,351 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-21 00:40:16,394 [ scc.config] DEBUG Found remote.origin.url 2024-03-21 00:40:16,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-03-21 00:40:17,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-21 00:40:17,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-21 00:40:18,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-21 00:40:18,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-21 00:40:18,585 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:40:18,626 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:40:18,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-03-21 00:40:18,627 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-21 00:40:18,632 [ scc.git] DEBUG Check current status 2024-03-21 00:40:18,632 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-21 00:40:18,650 [ scc.git] DEBUG 2078ac7 Bump version: 5.8.0 → 5.8.1.dev0 2024-03-21 00:40:18,651 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-21 00:40:18,700 [ scc.config] DEBUG Found remote.origin.url 2024-03-21 00:40:18,701 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-03-21 00:40:19,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-03-21 00:40:19,041 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-03-21 00:40:19,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-03-21 00:40:19,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-21 00:40:20,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-21 00:40:20,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-21 00:40:20,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-21 00:40:20,983 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:40:21,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:40:21,026 [ scc.git] DEBUG Resetting... 2024-03-21 00:40:21,026 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-03-21 00:40:21,035 [ scc.git] DEBUG HEAD is now at 8dbd966 merge master -Dorg -Snone 2024-03-21 00:40:21,036 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-03-21 00:40:21,138 [ scc.git] DEBUG Check current status 2024-03-21 00:40:21,139 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-21 00:40:21,144 [ scc.git] DEBUG 8dbd966 merge master -Dorg -Snone 2024-03-21 00:40:21,145 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-21 00:40:21,194 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-03-21 00:40:21,197 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-03-21 00:40:21,200 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-03-21 00:40:21,203 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-03-21 00:40:21,206 [ scc.git] DEBUG 3b7ccfa865a44b0309b69c6dca34af2d12343a5d omero-figure (v6.2.0-1-g3b7ccfa8) 2024-03-21 00:40:21,209 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-03-21 00:40:21,212 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-03-21 00:40:21,215 [ scc.git] DEBUG a232ed07b982c17d7bb87f2d93a72c451ae836f3 omero-iviewer (v0.13.0-16-ga232ed0) 2024-03-21 00:40:21,218 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-03-21 00:40:21,221 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-03-21 00:40:21,224 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-03-21 00:40:21,226 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-03-21 00:40:21,230 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-03-21 00:40:21,233 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-03-21 00:40:21,236 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-03-21 00:40:21,239 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-03-21 00:40:21,241 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-03-21 00:40:21,244 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-03-21 00:40:21,246 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-03-21 00:40:21,249 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-03-21 00:40:21,252 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-03-21 00:40:21,255 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-03-21 00:40:21,256 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-03-21 00:40:21,256 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-03-21 00:40:21,256 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-03-21 00:40:21,256 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-03-21 00:40:21,256 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-03-21 00:40:21,256 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-03-21 00:40:21,256 [ scc.repo] DEBUG ## PRs found: 2024-03-21 00:40:21,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-03-21 00:40:21,409 [ scc.repo] DEBUG ## Branches found: 2024-03-21 00:40:21,410 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:40:21,410 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:40:21,415 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-21 00:40:21,419 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-21 00:40:21,419 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-21 00:40:21,423 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-21 00:40:21,430 [ scc.git] DEBUG Already up to date. 2024-03-21 00:40:21,430 [ scc.git] DEBUG ## Unique users: [] 2024-03-21 00:40:21,430 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:40:21,430 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:40:21,435 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-21 00:40:21,489 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:40:21,490 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:40:21,495 [ scc.repo] DEBUG ## PRs found: 2024-03-21 00:40:21,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-03-21 00:40:21,828 [ scc.repo] DEBUG ## Branches found: 2024-03-21 00:40:21,828 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-03-21 00:40:21,828 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:40:21,828 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:40:21,837 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-21 00:40:21,842 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-21 00:40:21,842 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-21 00:40:21,847 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-21 00:40:21,851 [ scc.git] DEBUG Already up to date. 2024-03-21 00:40:21,851 [ scc.git] DEBUG ## Unique users: [] 2024-03-21 00:40:21,851 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:40:21,851 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:40:21,855 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-21 00:40:21,895 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:40:21,895 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:40:21,900 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:40:21,941 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-21 00:40:21,947 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41d9c819a0> has no local changes 2024-03-21 00:40:21,947 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/)' 2024-03-21 00:40:21,954 [ scc.git] DEBUG [detached HEAD 18bd039] merge master -Dorg -Ssuccess-only 2024-03-21 00:40:21,955 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:40:21,955 [ scc.repo] DEBUG ## PRs found: 2024-03-21 00:40:22,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-03-21 00:40:22,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-03-21 00:40:23,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-03-21 00:40:23,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-03-21 00:40:24,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-21 00:40:24,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-21 00:40:25,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-03-21 00:40:25,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-03-21 00:40:25,562 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-03-21 00:40:26,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-03-21 00:40:26,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-03-21 00:40:26,482 [ scc.repo] DEBUG ## Branches found: 2024-03-21 00:40:26,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-03-21 00:40:26,482 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:40:26,483 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:40:26,488 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-21 00:40:26,493 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-21 00:40:26,493 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-21 00:40:26,500 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-21 00:40:26,506 [ scc.git] DEBUG Already up to date. 2024-03-21 00:40:26,506 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-03-21 00:40:26,957 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-03-21 00:40:26,957 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-03-21 00:40:26,962 [ scc.git] DEBUG ## Unique users: [] 2024-03-21 00:40:26,962 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:40:26,963 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:40:26,969 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-03-21 00:40:26,976 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:40:26,982 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-03-21 00:40:26,999 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-21 00:40:27,002 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-03-21 00:40:27,002 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-03-21 00:40:27,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:40:27,165 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-21 00:40:27,210 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:40:27,210 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:40:27,215 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:40:27,256 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-21 00:40:27,262 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41d8be49a0> has no local changes 2024-03-21 00:40:27,262 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/)' 2024-03-21 00:40:27,282 [ scc.git] DEBUG [detached HEAD 7e709ae] merge master -Dorg -Ssuccess-only 2024-03-21 00:40:27,283 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:40:27,283 [ scc.repo] DEBUG ## PRs found: 2024-03-21 00:40:27,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-03-21 00:40:28,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-03-21 00:40:28,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-03-21 00:40:29,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-03-21 00:40:29,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-03-21 00:40:30,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-03-21 00:40:30,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-21 00:40:31,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-03-21 00:40:31,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-03-21 00:40:31,425 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-03-21 00:40:31,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-03-21 00:40:32,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-03-21 00:40:32,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-03-21 00:40:33,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-03-21 00:40:33,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-03-21 00:40:33,675 [ scc.repo] DEBUG ## Branches found: 2024-03-21 00:40:33,675 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-03-21 00:40:33,675 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:40:33,675 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:40:33,681 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-21 00:40:33,686 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-21 00:40:33,686 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-21 00:40:33,690 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-21 00:40:33,696 [ scc.git] DEBUG Already up to date. 2024-03-21 00:40:33,696 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-03-21 00:40:34,205 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-03-21 00:40:34,205 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-03-21 00:40:34,211 [ scc.git] DEBUG ## Unique users: [] 2024-03-21 00:40:34,211 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:40:34,211 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:40:34,216 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-03-21 00:40:34,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:40:34,225 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-03-21 00:40:34,257 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-21 00:40:34,260 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-03-21 00:40:34,260 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-03-21 00:40:34,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:40:34,420 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-21 00:40:34,462 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:40:34,462 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:40:34,469 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:40:34,510 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-21 00:40:34,517 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41d9c81b80> has no local changes 2024-03-21 00:40:34,517 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/)' 2024-03-21 00:40:34,525 [ scc.git] DEBUG [detached HEAD c54cf7c] merge master -Dorg -Ssuccess-only 2024-03-21 00:40:34,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:40:34,526 [ scc.repo] DEBUG ## PRs found: 2024-03-21 00:40:34,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-03-21 00:40:35,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-03-21 00:40:35,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-03-21 00:40:36,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-03-21 00:40:36,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-21 00:40:37,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-21 00:40:37,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-03-21 00:40:38,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-03-21 00:40:38,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-03-21 00:40:39,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-03-21 00:40:39,084 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-03-21 00:40:39,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-03-21 00:40:40,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-03-21 00:40:40,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-03-21 00:40:41,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-03-21 00:40:41,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-21 00:40:41,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-03-21 00:40:42,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-03-21 00:40:42,342 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-03-21 00:40:42,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-03-21 00:40:43,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-03-21 00:40:43,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-03-21 00:40:44,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-03-21 00:40:44,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-21 00:40:45,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-03-21 00:40:45,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-03-21 00:40:45,594 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-03-21 00:40:45,595 [ scc.repo] DEBUG ## Branches found: 2024-03-21 00:40:45,595 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-03-21 00:40:45,595 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:40:45,595 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:40:45,602 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-21 00:40:45,608 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-21 00:40:45,608 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-21 00:40:45,614 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-21 00:40:45,619 [ scc.git] DEBUG Already up to date. 2024-03-21 00:40:45,620 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-03-21 00:40:46,071 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-03-21 00:40:46,072 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-03-21 00:40:46,078 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-03-21 00:40:46,520 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-03-21 00:40:46,520 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-03-21 00:40:46,526 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-03-21 00:40:46,984 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-03-21 00:40:46,984 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-03-21 00:40:46,989 [ scc.git] DEBUG ## Unique users: [] 2024-03-21 00:40:46,989 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:40:46,989 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:40:46,994 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-03-21 00:40:47,002 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:40:47,007 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-03-21 00:40:47,136 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-03-21 00:40:47,137 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-03-21 00:40:47,137 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-03-21 00:40:47,137 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-03-21 00:40:47,137 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-03-21 00:40:47,143 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-03-21 00:40:47,152 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-03-21 00:40:47,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:40:47,319 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-03-21 00:40:47,326 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-03-21 00:40:47,333 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#6](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-03-21 00:40:47,338 [ scc.config] DEBUG Found github.token 2024-03-21 00:40:47,338 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-03-21 00:40:47,338 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-03-21 00:40:47,345 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:40:47,351 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-03-21 00:40:47,393 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-03-21 00:40:47,393 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-03-21 00:40:47,393 [ scc.git] DEBUG Auto-merging setup.py 2024-03-21 00:40:47,393 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-03-21 00:40:47,393 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-03-21 00:40:47,393 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-03-21 00:40:47,393 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-03-21 00:40:47,393 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-03-21 00:40:47,393 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-03-21 00:40:47,399 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-03-21 00:40:47,405 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-03-21 00:40:47,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:40:47,731 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-03-21 00:40:47,738 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-03-21 00:40:47,744 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#6](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-03-21 00:40:47,750 [ scc.config] DEBUG Found github.token 2024-03-21 00:40:47,750 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-03-21 00:40:47,750 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-03-21 00:40:47,757 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:40:47,762 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-03-21 00:40:47,776 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-03-21 00:40:47,776 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-03-21 00:40:47,777 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-21 00:40:47,780 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-03-21 00:40:47,780 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-03-21 00:40:47,780 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-03-21 00:40:47,780 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-03-21 00:40:47,780 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-03-21 00:40:47,780 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-03-21 00:40:48,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:40:48,141 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-21 00:40:48,185 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:40:48,185 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:40:48,190 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:40:48,233 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-21 00:40:48,239 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41d8347700> has no local changes 2024-03-21 00:40:48,239 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/)' 2024-03-21 00:40:48,248 [ scc.git] DEBUG [detached HEAD 37e39fb] merge master -Dorg -Ssuccess-only 2024-03-21 00:40:48,248 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:40:48,248 [ scc.repo] DEBUG ## PRs found: 2024-03-21 00:40:48,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-03-21 00:40:49,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/548 HTTP/1.1" 200 None 2024-03-21 00:40:49,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/32b0ccd55ce3c95dabcf8ebf817b032e4b864438 HTTP/1.1" 200 None 2024-03-21 00:40:50,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/32b0ccd55ce3c95dabcf8ebf817b032e4b864438/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-21 00:40:50,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/32b0ccd55ce3c95dabcf8ebf817b032e4b864438/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-21 00:40:50,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/32b0ccd55ce3c95dabcf8ebf817b032e4b864438 HTTP/1.1" 200 None 2024-03-21 00:40:51,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/32b0ccd55ce3c95dabcf8ebf817b032e4b864438?per_page=1 HTTP/1.1" 200 2 2024-03-21 00:40:51,396 [ scc.repo] DEBUG - PR 548 will-moore 'Fix cropping of panel labels and float usage for shape labels' 2024-03-21 00:40:51,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543 HTTP/1.1" 200 None 2024-03-21 00:40:52,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543/comments HTTP/1.1" 200 None 2024-03-21 00:40:52,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/477 HTTP/1.1" 200 None 2024-03-21 00:40:53,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/477/comments HTTP/1.1" 200 None 2024-03-21 00:40:53,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d1948f063f3b4b5736f4d2cf26dc0da7091dd933 HTTP/1.1" 200 None 2024-03-21 00:40:54,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d1948f063f3b4b5736f4d2cf26dc0da7091dd933/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-21 00:40:54,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d1948f063f3b4b5736f4d2cf26dc0da7091dd933/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-21 00:40:55,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d1948f063f3b4b5736f4d2cf26dc0da7091dd933 HTTP/1.1" 200 None 2024-03-21 00:40:55,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/d1948f063f3b4b5736f4d2cf26dc0da7091dd933?per_page=1 HTTP/1.1" 200 2 2024-03-21 00:40:55,541 [ scc.repo] DEBUG - PR 477 will-moore 'Vite' 2024-03-21 00:40:55,541 [ scc.repo] DEBUG ## Branches found: 2024-03-21 00:40:55,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-03-21 00:40:55,541 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:40:55,541 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:40:55,547 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-21 00:40:55,552 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-21 00:40:55,552 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-21 00:40:55,558 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-21 00:40:55,564 [ scc.git] DEBUG Already up to date. 2024-03-21 00:40:55,564 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-03-21 00:40:56,749 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-03-21 00:40:56,750 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-03-21 00:40:56,752 [ scc.git] DEBUG Calling 'git fetch origin pull/548/head' 2024-03-21 00:40:57,173 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-03-21 00:40:57,173 [ scc.git] DEBUG * branch refs/pull/548/head -> FETCH_HEAD 2024-03-21 00:40:57,178 [ scc.git] DEBUG ## Unique users: [] 2024-03-21 00:40:57,178 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:40:57,178 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:40:57,183 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d1948f063f3b4b5736f4d2cf26dc0da7091dd933' 2024-03-21 00:40:57,207 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:40:57,213 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Vite) d1948f063f3b4b5736f4d2cf26dc0da7091dd933' 2024-03-21 00:40:57,257 [ scc.git] DEBUG Auto-merging .bumpversion.cfg 2024-03-21 00:40:57,258 [ scc.git] DEBUG Auto-merging setup.py 2024-03-21 00:40:57,258 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-21 00:40:57,315 [ scc.git] DEBUG .bumpversion.cfg | 1 + 2024-03-21 00:40:57,315 [ scc.git] DEBUG .gitignore | 5 +- 2024-03-21 00:40:57,315 [ scc.git] DEBUG Dockerfile | 15 - 2024-03-21 00:40:57,315 [ scc.git] DEBUG Gruntfile.js | 177 - 2024-03-21 00:40:57,315 [ scc.git] DEBUG README.rst | 58 +- 2024-03-21 00:40:57,315 [ scc.git] DEBUG deploy_build.sh | 12 + 2024-03-21 00:40:57,315 [ scc.git] DEBUG docs/demo/index.html | 940 --- 2024-03-21 00:40:57,315 [ scc.git] DEBUG .../static/figure/3rdparty/backbone-1.0.0.js | 1571 ---- 2024-03-21 00:40:57,315 [ scc.git] DEBUG .../figure/3rdparty/backbone.mousetrap/README.md | 28 - 2024-03-21 00:40:57,315 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/css/bootstrap.css | 6805 ---------------- 2024-03-21 00:40:57,315 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/css/bootstrap.min.css | 9 - 2024-03-21 00:40:57,315 [ scc.git] DEBUG .../fonts/glyphicons-halflings-regular.eot | Bin 14079 -> 0 bytes 2024-03-21 00:40:57,315 [ scc.git] DEBUG .../fonts/glyphicons-halflings-regular.svg | 228 - 2024-03-21 00:40:57,316 [ scc.git] DEBUG .../fonts/glyphicons-halflings-regular.ttf | Bin 29512 -> 0 bytes 2024-03-21 00:40:57,316 [ scc.git] DEBUG .../fonts/glyphicons-halflings-regular.woff | Bin 16448 -> 0 bytes 2024-03-21 00:40:57,316 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/js/bootstrap.js | 1999 ----- 2024-03-21 00:40:57,316 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/js/bootstrap.min.js | 6 - 2024-03-21 00:40:57,316 [ scc.git] DEBUG .../css/bootstrap-colorpicker.css | 217 - 2024-03-21 00:40:57,316 [ scc.git] DEBUG .../css/bootstrap-colorpicker.min.css | 9 - 2024-03-21 00:40:57,316 [ scc.git] DEBUG .../img/bootstrap-colorpicker/alpha-horizontal.png | Bin 3635 -> 0 bytes 2024-03-21 00:40:57,316 [ scc.git] DEBUG .../img/bootstrap-colorpicker/alpha.png | Bin 3271 -> 0 bytes 2024-03-21 00:40:57,316 [ scc.git] DEBUG .../img/bootstrap-colorpicker/hue.png | Bin 2972 -> 0 bytes 2024-03-21 00:40:57,316 [ scc.git] DEBUG .../img/bootstrap-colorpicker/saturation.png | Bin 8817 -> 0 bytes 2024-03-21 00:40:57,316 [ scc.git] DEBUG .../js/bootstrap-colorpicker.js | 1028 --- 2024-03-21 00:40:57,316 [ scc.git] DEBUG .../js/bootstrap-colorpicker.min.js | 1 - 2024-03-21 00:40:57,316 [ scc.git] DEBUG .../figure/3rdparty/jquery-1.11.1/jquery.min.js | 4 - 2024-03-21 00:40:57,316 [ scc.git] DEBUG .../jquery-ui-1.10.4/css/jquery.ui.base.css | 28 - 2024-03-21 00:40:57,316 [ scc.git] DEBUG .../jquery-ui-1.10.4/css/jquery.ui.slider.css | 73 - 2024-03-21 00:40:57,316 [ scc.git] DEBUG .../3rdparty/jquery-ui-1.10.4/jquery-ui.min.js | 12 - 2024-03-21 00:40:57,316 [ scc.git] DEBUG 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src/js/views/info_panel_view.js | 20 +- 2024-03-21 00:40:57,320 [ scc.git] DEBUG src/js/views/labels_from_maps_modal.js | 53 +- 2024-03-21 00:40:57,320 [ scc.git] DEBUG src/js/views/legend_view.js | 13 +- 2024-03-21 00:40:57,320 [ scc.git] DEBUG src/js/views/lutpicker.js | 39 +- 2024-03-21 00:40:57,320 [ scc.git] DEBUG src/js/views/modal_views.js | 57 +- 2024-03-21 00:40:57,320 [ scc.git] DEBUG src/js/views/panel_view.js | 39 +- 2024-03-21 00:40:57,320 [ scc.git] DEBUG src/js/views/raphael-rect.js | 6 +- 2024-03-21 00:40:57,320 [ scc.git] DEBUG src/js/views/right_panel_view.js | 441 +- 2024-03-21 00:40:57,321 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 17 +- 2024-03-21 00:40:57,321 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 47 +- 2024-03-21 00:40:57,321 [ scc.git] DEBUG src/js/views/scalebar_form_view.js | 24 +- 2024-03-21 00:40:57,321 [ scc.git] DEBUG src/js/views/svg_model_view.js | 11 +- 2024-03-21 00:40:57,321 [ scc.git] DEBUG .../ome.csrf.js => src/js/views/util.csrf.js | 29 +- 2024-03-21 00:40:57,321 [ scc.git] DEBUG src/js/views/util.js | 68 +- 2024-03-21 00:40:57,321 [ scc.git] DEBUG src/js/views/zt_sliders_view.js | 332 + 2024-03-21 00:40:57,321 [ scc.git] DEBUG src/scss/styles.scss | 2 + 2024-03-21 00:40:57,321 [ scc.git] DEBUG src/shapeEditorTest.html | 149 + 2024-03-21 00:40:57,321 [ scc.git] DEBUG src/templates/channel_slider.template.html | 91 + 2024-03-21 00:40:57,321 [ scc.git] DEBUG src/templates/channel_slider_template.html | 78 - 2024-03-21 00:40:57,321 [ scc.git] DEBUG ...el_template.html => figure_panel.template.html} | 2 +- 2024-03-21 00:40:57,321 [ scc.git] DEBUG ...le_item.html => figure_file_item.template.html} | 0 2024-03-21 00:40:57,321 [ scc.git] DEBUG ...te.html => image_display_options.template.html} | 11 +- 2024-03-21 00:40:57,321 [ scc.git] DEBUG ...anel_template.html => info_panel.template.html} | 8 +- 2024-03-21 00:40:57,321 [ scc.git] DEBUG .../{label_template.html => label.template.html} | 0 2024-03-21 00:40:57,321 [ scc.git] DEBUG ...ate.html => label_right_vertical.template.html} | 0 2024-03-21 00:40:57,321 [ scc.git] DEBUG ...ble_template.html => label_table.template.html} | 0 2024-03-21 00:40:57,321 [ scc.git] DEBUG ..._template.html => label_vertical.template.html} | 0 2024-03-21 00:40:57,321 [ scc.git] DEBUG ...orm_template.html => labels_form.template.html} | 2 +- 2024-03-21 00:40:57,321 [ scc.git] DEBUG src/templates/labels_form_inner.template.html | 172 + 2024-03-21 00:40:57,321 [ scc.git] DEBUG src/templates/labels_form_inner_template.html | 173 - 2024-03-21 00:40:57,321 [ scc.git] DEBUG .../{lut_picker.html => lut_picker.template.html} | 6 +- 2024-03-21 00:40:57,321 [ scc.git] DEBUG ...modal_roi.html => crop_modal_roi.template.html} | 0 2024-03-21 00:40:57,321 [ scc.git] DEBUG ...mplate.html => paper_setup_modal.template.html} | 103 +- 2024-03-21 00:40:57,321 [ scc.git] DEBUG ...mplate.html => preview_id_change.template.html} | 54 +- 2024-03-21 00:40:57,321 [ scc.git] DEBUG ..._modal_roi.html => roi_modal_roi.template.html} | 4 +- 2024-03-21 00:40:57,321 [ scc.git] DEBUG ...al_shape.html => roi_modal_shape.template.html} | 0 2024-03-21 00:40:57,321 [ scc.git] DEBUG ...t_buttons.html => roi_zt_buttons.template.html} | 4 +- 2024-03-21 00:40:57,321 [ scc.git] DEBUG src/templates/rois_form.template.html | 94 + 2024-03-21 00:40:57,321 [ scc.git] DEBUG src/templates/rois_form_template.html | 93 - 2024-03-21 00:40:57,322 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 143 + 2024-03-21 00:40:57,322 [ scc.git] DEBUG src/templates/scalebar_form_template.html | 143 - 2024-03-21 00:40:57,322 [ scc.git] DEBUG ..._template.html => scalebar_panel.template.html} | 0 2024-03-21 00:40:57,322 [ scc.git] DEBUG ...r_template.html => shape_toolbar.template.html} | 62 +- 2024-03-21 00:40:57,322 [ scc.git] DEBUG src/templates/viewport.template.html | 5 + 2024-03-21 00:40:57,322 [ scc.git] DEBUG ..._template.html => viewport_inner.template.html} | 0 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DEBUG rename {omero_figure/static/figure => src}/images/line-icon-16.png (100%) 2024-03-21 00:40:57,324 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/luts_10.png (100%) 2024-03-21 00:40:57,324 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/markdown_dark32x20.png (100%) 2024-03-21 00:40:57,324 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/markdown_light32x20.png (100%) 2024-03-21 00:40:57,324 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/polygon-icon-16.png (100%) 2024-03-21 00:40:57,324 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/polyline-icon-16.png (100%) 2024-03-21 00:40:57,324 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/projection20.png (100%) 2024-03-21 00:40:57,324 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/square-outline-icon-16.png (100%) 2024-03-21 00:40:57,324 [ scc.git] DEBUG create mode 100644 src/index.html 2024-03-21 00:40:57,324 [ scc.git] DEBUG delete mode 100644 src/js/app.js 2024-03-21 00:40:57,324 [ scc.git] DEBUG create mode 100644 src/js/main.js 2024-03-21 00:40:57,324 [ scc.git] DEBUG create mode 100644 src/js/shapeEditorTest.js 2024-03-21 00:40:57,324 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/ellipse.js 2024-03-21 00:40:57,324 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/line.js 2024-03-21 00:40:57,324 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/polygon.js 2024-03-21 00:40:57,325 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/rect.js 2024-03-21 00:40:57,325 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/shape_manager.js 2024-03-21 00:40:57,325 [ scc.git] DEBUG rename {omero_figure/static/figure/3rdparty/backbone.mousetrap => src/js/views}/backbone.mousetrap.js (76%) 2024-03-21 00:40:57,325 [ scc.git] DEBUG mode change 100755 => 100644 2024-03-21 00:40:57,325 [ scc.git] DEBUG rename omero_figure/static/figure/3rdparty/ome.csrf.js => src/js/views/util.csrf.js (84%) 2024-03-21 00:40:57,325 [ scc.git] DEBUG create mode 100644 src/js/views/zt_sliders_view.js 2024-03-21 00:40:57,325 [ scc.git] DEBUG create mode 100644 src/scss/styles.scss 2024-03-21 00:40:57,325 [ scc.git] DEBUG create mode 100644 src/shapeEditorTest.html 2024-03-21 00:40:57,325 [ scc.git] DEBUG create mode 100644 src/templates/channel_slider.template.html 2024-03-21 00:40:57,325 [ scc.git] DEBUG delete mode 100644 src/templates/channel_slider_template.html 2024-03-21 00:40:57,325 [ scc.git] DEBUG rename src/templates/{figure_panel_template.html => figure_panel.template.html} (77%) 2024-03-21 00:40:57,325 [ scc.git] DEBUG rename src/templates/files/{figure_file_item.html => figure_file_item.template.html} (100%) 2024-03-21 00:40:57,325 [ scc.git] DEBUG rename src/templates/{image_display_options_template.html => image_display_options.template.html} (54%) 2024-03-21 00:40:57,325 [ scc.git] DEBUG rename src/templates/{info_panel_template.html => info_panel.template.html} (90%) 2024-03-21 00:40:57,325 [ scc.git] DEBUG rename src/templates/labels/{label_template.html => label.template.html} (100%) 2024-03-21 00:40:57,325 [ scc.git] DEBUG rename src/templates/labels/{label_right_vertical_template.html => label_right_vertical.template.html} (100%) 2024-03-21 00:40:57,325 [ scc.git] DEBUG rename src/templates/labels/{label_table_template.html => label_table.template.html} (100%) 2024-03-21 00:40:57,325 [ scc.git] DEBUG rename src/templates/labels/{label_vertical_template.html => label_vertical.template.html} (100%) 2024-03-21 00:40:57,325 [ scc.git] DEBUG rename src/templates/{labels_form_template.html => labels_form.template.html} (89%) 2024-03-21 00:40:57,325 [ scc.git] DEBUG create mode 100644 src/templates/labels_form_inner.template.html 2024-03-21 00:40:57,325 [ scc.git] DEBUG delete mode 100644 src/templates/labels_form_inner_template.html 2024-03-21 00:40:57,325 [ scc.git] DEBUG rename src/templates/{lut_picker.html => lut_picker.template.html} (64%) 2024-03-21 00:40:57,325 [ scc.git] DEBUG rename src/templates/modal_dialogs/{crop_modal_roi.html => crop_modal_roi.template.html} (100%) 2024-03-21 00:40:57,325 [ scc.git] DEBUG rename src/templates/modal_dialogs/{paper_setup_modal_template.html => paper_setup_modal.template.html} (54%) 2024-03-21 00:40:57,325 [ scc.git] DEBUG rename src/templates/modal_dialogs/{preview_Id_change_template.html => preview_id_change.template.html} (52%) 2024-03-21 00:40:57,325 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_modal_roi.html => roi_modal_roi.template.html} (94%) 2024-03-21 00:40:57,325 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_modal_shape.html => roi_modal_shape.template.html} (100%) 2024-03-21 00:40:57,325 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_zt_buttons.html => roi_zt_buttons.template.html} (62%) 2024-03-21 00:40:57,326 [ scc.git] DEBUG create mode 100644 src/templates/rois_form.template.html 2024-03-21 00:40:57,326 [ scc.git] DEBUG delete mode 100644 src/templates/rois_form_template.html 2024-03-21 00:40:57,326 [ scc.git] DEBUG create mode 100644 src/templates/scalebar_form.template.html 2024-03-21 00:40:57,326 [ scc.git] DEBUG delete mode 100644 src/templates/scalebar_form_template.html 2024-03-21 00:40:57,326 [ scc.git] DEBUG rename src/templates/{scalebar_panel_template.html => scalebar_panel.template.html} (100%) 2024-03-21 00:40:57,326 [ scc.git] DEBUG rename src/templates/shapes/{shape_toolbar_template.html => shape_toolbar.template.html} (60%) 2024-03-21 00:40:57,326 [ scc.git] DEBUG create mode 100644 src/templates/viewport.template.html 2024-03-21 00:40:57,326 [ scc.git] DEBUG rename src/templates/{viewport_inner_template.html => viewport_inner.template.html} (100%) 2024-03-21 00:40:57,326 [ scc.git] DEBUG delete mode 100644 src/templates/viewport_template.html 2024-03-21 00:40:57,326 [ scc.git] DEBUG rename src/templates/{xywh_panel_template.html => xywh_panel.template.html} (64%) 2024-03-21 00:40:57,326 [ scc.git] DEBUG rename src/templates/{zoom_crop_template.html => zoom_crop.template.html} (54%) 2024-03-21 00:40:57,326 [ scc.git] DEBUG create mode 100644 vite.config.js 2024-03-21 00:40:57,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:40:57,473 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...32b0ccd55ce3c95dabcf8ebf817b032e4b864438' 2024-03-21 00:40:57,482 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:40:57,500 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 548 (Fix cropping of panel labels and float usage for shape labels) 32b0ccd55ce3c95dabcf8ebf817b032e4b864438' 2024-03-21 00:40:57,523 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-21 00:40:57,527 [ scc.git] DEBUG omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py | 6 +++--- 2024-03-21 00:40:57,527 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2024-03-21 00:40:57,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:40:57,907 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-21 00:40:57,946 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:40:57,946 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:40:57,952 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:40:57,994 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-21 00:40:58,009 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41d8358bb0> has no local changes 2024-03-21 00:40:58,010 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 543 will-moore 'Plate well labels' (stage: draft) Already up to date. Merged PRs: - PR 477 will-moore 'Vite' - PR 548 will-moore 'Fix cropping of panel labels and float usage for shape labels' Generated by OMERO-plugins-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/)' 2024-03-21 00:40:58,020 [ scc.git] DEBUG [detached HEAD 0c11943b] merge master -Dorg -Ssuccess-only 2024-03-21 00:40:58,021 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:40:58,021 [ scc.repo] DEBUG ## PRs found: 2024-03-21 00:40:58,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-03-21 00:40:58,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-03-21 00:40:59,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-03-21 00:40:59,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-03-21 00:41:00,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-21 00:41:00,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-03-21 00:41:01,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-03-21 00:41:01,172 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-03-21 00:41:01,172 [ scc.repo] DEBUG ## Branches found: 2024-03-21 00:41:01,172 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-03-21 00:41:01,172 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:41:01,172 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:01,177 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-21 00:41:01,182 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-21 00:41:01,182 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-21 00:41:01,188 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-21 00:41:01,194 [ scc.git] DEBUG Already up to date. 2024-03-21 00:41:01,194 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-03-21 00:41:01,589 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-03-21 00:41:01,589 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-03-21 00:41:01,594 [ scc.git] DEBUG ## Unique users: [] 2024-03-21 00:41:01,594 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:41:01,594 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:01,599 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-03-21 00:41:01,604 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:01,608 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-03-21 00:41:01,636 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-03-21 00:41:01,636 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-21 00:41:01,639 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-03-21 00:41:01,639 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-03-21 00:41:01,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:41:01,786 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-21 00:41:01,829 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:41:01,829 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:01,835 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:41:01,875 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-21 00:41:01,883 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41d8b93430> has no local changes 2024-03-21 00:41:01,883 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/)' 2024-03-21 00:41:01,892 [ scc.git] DEBUG [detached HEAD 52b2fb3] merge master -Dorg -Ssuccess-only 2024-03-21 00:41:01,892 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:41:01,892 [ scc.repo] DEBUG ## PRs found: 2024-03-21 00:41:02,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-03-21 00:41:02,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-03-21 00:41:02,731 [ scc.repo] DEBUG # ... Include label: dependencies 2024-03-21 00:41:03,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-03-21 00:41:03,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-21 00:41:04,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-21 00:41:04,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-03-21 00:41:05,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-03-21 00:41:05,110 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-03-21 00:41:05,111 [ scc.repo] DEBUG ## Branches found: 2024-03-21 00:41:05,111 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-03-21 00:41:05,111 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:41:05,111 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:05,117 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-21 00:41:05,122 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-21 00:41:05,122 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-21 00:41:05,127 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-21 00:41:05,134 [ scc.git] DEBUG Already up to date. 2024-03-21 00:41:05,134 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-03-21 00:41:05,547 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-03-21 00:41:05,547 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-03-21 00:41:05,552 [ scc.git] DEBUG ## Unique users: [] 2024-03-21 00:41:05,552 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:41:05,552 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:05,557 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-03-21 00:41:05,563 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:05,568 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-03-21 00:41:05,580 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-21 00:41:05,584 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-03-21 00:41:05,584 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-03-21 00:41:05,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:41:05,739 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-21 00:41:05,782 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:41:05,782 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:05,788 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:41:05,829 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-21 00:41:05,837 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41d83475e0> has no local changes 2024-03-21 00:41:05,837 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/)' 2024-03-21 00:41:05,847 [ scc.git] DEBUG [detached HEAD 536d22d] merge master -Dorg -Ssuccess-only 2024-03-21 00:41:05,847 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:41:05,847 [ scc.repo] DEBUG ## PRs found: 2024-03-21 00:41:06,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-03-21 00:41:06,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-03-21 00:41:07,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f5a45e055da264fa0a385a5c0d51a6374708e5d2 HTTP/1.1" 200 None 2024-03-21 00:41:07,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f5a45e055da264fa0a385a5c0d51a6374708e5d2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-21 00:41:08,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f5a45e055da264fa0a385a5c0d51a6374708e5d2/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-21 00:41:08,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f5a45e055da264fa0a385a5c0d51a6374708e5d2 HTTP/1.1" 200 None 2024-03-21 00:41:09,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/f5a45e055da264fa0a385a5c0d51a6374708e5d2?per_page=1 HTTP/1.1" 200 2 2024-03-21 00:41:09,014 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-03-21 00:41:09,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/464 HTTP/1.1" 200 None 2024-03-21 00:41:09,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/464/comments HTTP/1.1" 200 None 2024-03-21 00:41:10,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/97542d9b749f93d4902f7dce703bbf2a04316a98 HTTP/1.1" 200 None 2024-03-21 00:41:10,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/97542d9b749f93d4902f7dce703bbf2a04316a98/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-21 00:41:11,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/97542d9b749f93d4902f7dce703bbf2a04316a98/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-21 00:41:11,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/97542d9b749f93d4902f7dce703bbf2a04316a98 HTTP/1.1" 200 None 2024-03-21 00:41:12,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/97542d9b749f93d4902f7dce703bbf2a04316a98?per_page=1 HTTP/1.1" 200 2 2024-03-21 00:41:12,244 [ scc.repo] DEBUG - PR 464 will-moore 'Tile load error warning' 2024-03-21 00:41:12,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-03-21 00:41:13,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-03-21 00:41:13,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-03-21 00:41:14,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-21 00:41:14,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-03-21 00:41:14,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-03-21 00:41:14,980 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-03-21 00:41:15,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/456 HTTP/1.1" 200 None 2024-03-21 00:41:15,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/456/comments HTTP/1.1" 200 None 2024-03-21 00:41:16,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745 HTTP/1.1" 200 None 2024-03-21 00:41:16,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-21 00:41:17,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-21 00:41:17,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745 HTTP/1.1" 200 None 2024-03-21 00:41:18,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745?per_page=1 HTTP/1.1" 200 2 2024-03-21 00:41:18,124 [ scc.repo] DEBUG - PR 456 will-moore 'Don't use tiles for non-big movies' 2024-03-21 00:41:18,124 [ scc.repo] DEBUG ## Branches found: 2024-03-21 00:41:18,124 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-03-21 00:41:18,124 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:41:18,125 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:18,130 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-21 00:41:18,135 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-21 00:41:18,135 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-21 00:41:18,140 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-21 00:41:18,145 [ scc.git] DEBUG Already up to date. 2024-03-21 00:41:18,145 [ scc.git] DEBUG Calling 'git fetch origin pull/456/head' 2024-03-21 00:41:19,607 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-03-21 00:41:19,607 [ scc.git] DEBUG * branch refs/pull/456/head -> FETCH_HEAD 2024-03-21 00:41:19,613 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-03-21 00:41:20,012 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-03-21 00:41:20,012 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-03-21 00:41:20,016 [ scc.git] DEBUG Calling 'git fetch origin pull/464/head' 2024-03-21 00:41:20,524 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-03-21 00:41:20,524 [ scc.git] DEBUG * branch refs/pull/464/head -> FETCH_HEAD 2024-03-21 00:41:20,530 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-03-21 00:41:21,368 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-03-21 00:41:21,369 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-03-21 00:41:21,371 [ scc.git] DEBUG ## Unique users: [] 2024-03-21 00:41:21,371 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:41:21,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:21,377 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2954dd294c5d9f89b64ca4cedcc76dd0c9a32745' 2024-03-21 00:41:21,384 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:21,389 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 456 (Don't use tiles for non-big movies) 2954dd294c5d9f89b64ca4cedcc76dd0c9a32745' 2024-03-21 00:41:21,433 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-21 00:41:21,436 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 5 +++-- 2024-03-21 00:41:21,436 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 2 deletions(-) 2024-03-21 00:41:21,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:41:21,599 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-03-21 00:41:21,606 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:21,611 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-03-21 00:41:21,656 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-21 00:41:21,660 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-03-21 00:41:21,660 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-03-21 00:41:21,660 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-03-21 00:41:22,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:41:22,247 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...97542d9b749f93d4902f7dce703bbf2a04316a98' 2024-03-21 00:41:22,254 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:22,259 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 464 (Tile load error warning) 97542d9b749f93d4902f7dce703bbf2a04316a98' 2024-03-21 00:41:22,291 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-21 00:41:22,296 [ scc.git] DEBUG css/app.css | 22 ++++++++++++++++++++++ 2024-03-21 00:41:22,296 [ scc.git] DEBUG src/events/events.js | 2 ++ 2024-03-21 00:41:22,296 [ scc.git] DEBUG src/index-dev.html | 6 +++--- 2024-03-21 00:41:22,296 [ scc.git] DEBUG src/viewers/ol3-viewer.html | 2 +- 2024-03-21 00:41:22,296 [ scc.git] DEBUG src/viewers/ol3-viewer.js | 4 +++- 2024-03-21 00:41:22,296 [ scc.git] DEBUG src/viewers/viewer/Viewer.js | 39 +++++++++++++++++++++++++++++++++++++-- 2024-03-21 00:41:22,296 [ scc.git] DEBUG 6 files changed, 68 insertions(+), 7 deletions(-) 2024-03-21 00:41:22,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:41:22,655 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f5a45e055da264fa0a385a5c0d51a6374708e5d2' 2024-03-21 00:41:22,662 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:22,668 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) f5a45e055da264fa0a385a5c0d51a6374708e5d2' 2024-03-21 00:41:22,771 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-03-21 00:41:22,771 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-21 00:41:22,776 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 7 +- 2024-03-21 00:41:22,776 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-03-21 00:41:22,776 [ scc.git] DEBUG src/app/header.html | 5 ++ 2024-03-21 00:41:22,776 [ scc.git] DEBUG src/app/header.js | 50 +++++++++++- 2024-03-21 00:41:22,776 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-03-21 00:41:22,776 [ scc.git] DEBUG src/utils/figure.js | 186 ++++++++++++++++++++++++++++++++++++++++++ 2024-03-21 00:41:22,776 [ scc.git] DEBUG 6 files changed, 257 insertions(+), 3 deletions(-) 2024-03-21 00:41:22,776 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-03-21 00:41:23,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:41:23,059 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-21 00:41:23,102 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:41:23,102 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:23,107 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:41:23,150 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-21 00:41:23,159 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41d836a4f0> has no local changes 2024-03-21 00:41:23,159 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 456 will-moore 'Don't use tiles for non-big movies' - PR 460 will-moore 'Channel min spinner fix' - PR 464 will-moore 'Tile load error warning' - PR 465 will-moore 'Save as Figure' Generated by OMERO-plugins-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/)' 2024-03-21 00:41:23,168 [ scc.git] DEBUG [detached HEAD 65a4970] merge master -Dorg -Ssuccess-only 2024-03-21 00:41:23,169 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:41:23,169 [ scc.repo] DEBUG ## PRs found: 2024-03-21 00:41:23,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-03-21 00:41:25,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-03-21 00:41:25,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-03-21 00:41:26,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-03-21 00:41:26,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-21 00:41:27,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-21 00:41:27,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-03-21 00:41:27,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-03-21 00:41:27,844 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-03-21 00:41:27,844 [ scc.repo] DEBUG ## Branches found: 2024-03-21 00:41:27,844 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-03-21 00:41:27,845 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:41:27,845 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:27,851 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-21 00:41:27,856 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-21 00:41:27,856 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-21 00:41:27,862 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-21 00:41:27,870 [ scc.git] DEBUG Already up to date. 2024-03-21 00:41:27,870 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-03-21 00:41:28,271 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-03-21 00:41:28,271 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-03-21 00:41:28,276 [ scc.git] DEBUG ## Unique users: [] 2024-03-21 00:41:28,276 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:41:28,276 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:28,282 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-03-21 00:41:28,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:28,294 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-03-21 00:41:28,304 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-21 00:41:28,307 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-03-21 00:41:28,307 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-03-21 00:41:28,307 [ scc.git] DEBUG requirements.txt | 2 +- 2024-03-21 00:41:28,307 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-03-21 00:41:28,307 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-03-21 00:41:28,307 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-03-21 00:41:28,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:41:28,460 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-21 00:41:28,503 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:41:28,503 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:28,509 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:41:28,549 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-21 00:41:28,556 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41d8322ac0> has no local changes 2024-03-21 00:41:28,556 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/)' 2024-03-21 00:41:28,564 [ scc.git] DEBUG [detached HEAD f5123ff] merge master -Dorg -Ssuccess-only 2024-03-21 00:41:28,565 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:41:28,565 [ scc.repo] DEBUG ## PRs found: 2024-03-21 00:41:28,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-03-21 00:41:29,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-03-21 00:41:29,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-03-21 00:41:30,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-03-21 00:41:30,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-21 00:41:31,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-21 00:41:31,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-03-21 00:41:32,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-03-21 00:41:32,351 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-03-21 00:41:32,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-03-21 00:41:33,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-03-21 00:41:33,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-03-21 00:41:34,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-21 00:41:34,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-03-21 00:41:35,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-03-21 00:41:35,106 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-03-21 00:41:35,106 [ scc.repo] DEBUG ## Branches found: 2024-03-21 00:41:35,106 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-03-21 00:41:35,106 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:41:35,106 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:35,112 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-21 00:41:35,119 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-21 00:41:35,119 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-21 00:41:35,125 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-21 00:41:35,131 [ scc.git] DEBUG Already up to date. 2024-03-21 00:41:35,131 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-03-21 00:41:35,726 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-03-21 00:41:35,726 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-03-21 00:41:35,731 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-03-21 00:41:36,324 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-03-21 00:41:36,324 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-03-21 00:41:36,329 [ scc.git] DEBUG ## Unique users: [] 2024-03-21 00:41:36,329 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:41:36,329 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:36,335 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-03-21 00:41:36,342 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:36,347 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-03-21 00:41:36,446 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-03-21 00:41:36,447 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-03-21 00:41:36,447 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-03-21 00:41:36,447 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-03-21 00:41:36,447 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-03-21 00:41:36,447 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-03-21 00:41:36,454 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-03-21 00:41:36,461 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-03-21 00:41:36,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:41:36,611 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-03-21 00:41:36,619 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-03-21 00:41:36,626 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#6](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-03-21 00:41:36,631 [ scc.config] DEBUG Found github.token 2024-03-21 00:41:36,631 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-03-21 00:41:36,631 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-03-21 00:41:36,639 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:36,644 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-03-21 00:41:36,700 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-03-21 00:41:36,700 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-03-21 00:41:36,700 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-03-21 00:41:36,700 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-03-21 00:41:36,700 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-03-21 00:41:36,706 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-03-21 00:41:36,714 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-03-21 00:41:37,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:41:37,016 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-03-21 00:41:37,023 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-03-21 00:41:37,029 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#6](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-03-21 00:41:37,036 [ scc.config] DEBUG Found github.token 2024-03-21 00:41:37,036 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-03-21 00:41:37,036 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-21 00:41:37,082 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:41:37,083 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:37,088 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:41:37,132 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-21 00:41:37,140 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41d834e5b0> has no local changes 2024-03-21 00:41:37,140 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/)' 2024-03-21 00:41:37,150 [ scc.git] DEBUG [detached HEAD 53e4db5] merge master -Dorg -Ssuccess-only 2024-03-21 00:41:37,150 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:41:37,150 [ scc.repo] DEBUG ## PRs found: 2024-03-21 00:41:37,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-03-21 00:41:38,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-03-21 00:41:38,025 [ scc.repo] DEBUG # ... Include label: dependencies 2024-03-21 00:41:38,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-03-21 00:41:39,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-21 00:41:39,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-21 00:41:40,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-03-21 00:41:40,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-03-21 00:41:40,462 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-03-21 00:41:40,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-03-21 00:41:40,917 [ scc.repo] DEBUG # ... Include label: dependencies 2024-03-21 00:41:41,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-03-21 00:41:41,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-21 00:41:42,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-21 00:41:42,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-03-21 00:41:43,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-03-21 00:41:43,269 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-03-21 00:41:43,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-03-21 00:41:43,729 [ scc.repo] DEBUG # ... Include label: dependencies 2024-03-21 00:41:44,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-03-21 00:41:44,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-21 00:41:45,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-21 00:41:45,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-03-21 00:41:46,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-03-21 00:41:46,203 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-03-21 00:41:46,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-03-21 00:41:47,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-03-21 00:41:47,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-03-21 00:41:48,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-03-21 00:41:48,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-03-21 00:41:48,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-03-21 00:41:48,961 [ scc.repo] DEBUG ## Branches found: 2024-03-21 00:41:48,961 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-03-21 00:41:48,962 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:41:48,962 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:48,968 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-21 00:41:48,973 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-21 00:41:48,973 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-21 00:41:48,978 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-21 00:41:48,984 [ scc.git] DEBUG Already up to date. 2024-03-21 00:41:48,984 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-03-21 00:41:49,381 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-03-21 00:41:49,381 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-03-21 00:41:49,386 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-03-21 00:41:49,769 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-03-21 00:41:49,769 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-03-21 00:41:49,774 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-03-21 00:41:50,164 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-03-21 00:41:50,164 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-03-21 00:41:50,169 [ scc.git] DEBUG ## Unique users: [] 2024-03-21 00:41:50,169 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:41:50,169 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:50,175 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-03-21 00:41:50,181 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:50,186 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-03-21 00:41:50,195 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-21 00:41:50,197 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-03-21 00:41:50,197 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-03-21 00:41:50,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:41:50,354 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-03-21 00:41:50,360 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:50,365 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-03-21 00:41:50,410 [ scc.git] DEBUG Auto-merging package-lock.json 2024-03-21 00:41:50,411 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-21 00:41:50,414 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-03-21 00:41:50,414 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-03-21 00:41:50,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:41:50,755 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-03-21 00:41:50,761 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:50,767 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-03-21 00:41:50,811 [ scc.git] DEBUG Auto-merging package-lock.json 2024-03-21 00:41:50,811 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-21 00:41:50,815 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-03-21 00:41:50,815 [ scc.git] DEBUG package.json | 2 +- 2024-03-21 00:41:50,815 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-03-21 00:41:51,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:41:51,164 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-21 00:41:51,205 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:41:51,206 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:51,211 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:41:51,264 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-21 00:41:51,271 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41d8b8bf10> has no local changes 2024-03-21 00:41:51,271 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/)' 2024-03-21 00:41:51,281 [ scc.git] DEBUG [detached HEAD 7e32253] merge master -Dorg -Ssuccess-only 2024-03-21 00:41:51,282 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:41:51,282 [ scc.repo] DEBUG ## PRs found: 2024-03-21 00:41:51,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-03-21 00:41:52,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-03-21 00:41:52,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-03-21 00:41:53,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-21 00:41:53,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-03-21 00:41:54,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-03-21 00:41:54,114 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-03-21 00:41:54,114 [ scc.repo] DEBUG ## Branches found: 2024-03-21 00:41:54,114 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-03-21 00:41:54,114 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:41:54,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:54,120 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-21 00:41:54,125 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-21 00:41:54,125 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-21 00:41:54,130 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-21 00:41:54,136 [ scc.git] DEBUG Already up to date. 2024-03-21 00:41:54,137 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-03-21 00:41:54,525 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-03-21 00:41:54,525 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-03-21 00:41:54,529 [ scc.git] DEBUG ## Unique users: [] 2024-03-21 00:41:54,530 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:41:54,530 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:54,535 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-03-21 00:41:54,541 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:54,546 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-03-21 00:41:54,556 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-21 00:41:54,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:41:54,715 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-21 00:41:54,759 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:41:54,760 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:54,765 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:41:54,812 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-21 00:41:54,817 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41d8340280> has no local changes 2024-03-21 00:41:54,818 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/)' 2024-03-21 00:41:54,825 [ scc.git] DEBUG [detached HEAD 686ce80] merge master -Dorg -Ssuccess-only 2024-03-21 00:41:54,825 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:41:54,825 [ scc.repo] DEBUG ## PRs found: 2024-03-21 00:41:55,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-03-21 00:41:55,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-03-21 00:41:56,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-03-21 00:41:56,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-03-21 00:41:57,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-03-21 00:41:57,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-21 00:41:57,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-03-21 00:41:58,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-03-21 00:41:58,384 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-03-21 00:41:58,384 [ scc.repo] DEBUG ## Branches found: 2024-03-21 00:41:58,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-03-21 00:41:58,384 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:41:58,384 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:58,391 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-21 00:41:58,397 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-21 00:41:58,397 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-21 00:41:58,403 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-21 00:41:58,410 [ scc.git] DEBUG Already up to date. 2024-03-21 00:41:58,410 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-03-21 00:41:58,956 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-03-21 00:41:58,956 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-03-21 00:41:58,960 [ scc.git] DEBUG ## Unique users: [] 2024-03-21 00:41:58,961 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:41:58,961 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:58,966 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-03-21 00:41:58,972 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:58,977 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-03-21 00:41:59,018 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-03-21 00:41:59,018 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-21 00:41:59,021 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-03-21 00:41:59,021 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-03-21 00:41:59,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:41:59,172 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-21 00:41:59,218 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:41:59,218 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:41:59,224 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:41:59,264 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-21 00:41:59,271 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41d82dd5b0> has no local changes 2024-03-21 00:41:59,271 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/)' 2024-03-21 00:41:59,281 [ scc.git] DEBUG [detached HEAD 45a92b3] merge master -Dorg -Ssuccess-only 2024-03-21 00:41:59,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:41:59,281 [ scc.repo] DEBUG ## PRs found: 2024-03-21 00:41:59,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-03-21 00:42:00,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-03-21 00:42:00,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-03-21 00:42:01,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-03-21 00:42:01,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-21 00:42:02,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-03-21 00:42:02,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-03-21 00:42:02,424 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-03-21 00:42:02,424 [ scc.repo] DEBUG ## Branches found: 2024-03-21 00:42:02,424 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-03-21 00:42:02,424 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:02,424 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:02,430 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-21 00:42:02,435 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-21 00:42:02,436 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-21 00:42:02,441 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-21 00:42:02,447 [ scc.git] DEBUG Already up to date. 2024-03-21 00:42:02,447 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-03-21 00:42:03,019 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-03-21 00:42:03,019 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-03-21 00:42:03,024 [ scc.git] DEBUG ## Unique users: [] 2024-03-21 00:42:03,025 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:03,025 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:03,030 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-03-21 00:42:03,036 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:03,043 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-03-21 00:42:03,128 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-03-21 00:42:03,128 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-03-21 00:42:03,128 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-03-21 00:42:03,128 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-03-21 00:42:03,128 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-03-21 00:42:03,128 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-03-21 00:42:03,128 [ scc.git] DEBUG Auto-merging setup.py 2024-03-21 00:42:03,129 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-03-21 00:42:03,129 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-03-21 00:42:03,129 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-03-21 00:42:03,136 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-03-21 00:42:03,143 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-03-21 00:42:03,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:03,295 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-03-21 00:42:03,303 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-03-21 00:42:03,309 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#6](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/urls.py - omero_signup/views.py - setup.py --conflicts 2024-03-21 00:42:03,314 [ scc.config] DEBUG Found github.token 2024-03-21 00:42:03,314 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-03-21 00:42:03,314 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-21 00:42:03,357 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:03,357 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:03,362 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:42:03,410 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-21 00:42:03,417 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41d8321af0> has no local changes 2024-03-21 00:42:03,417 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/)' 2024-03-21 00:42:03,425 [ scc.git] DEBUG [detached HEAD 85dd1a6] merge master -Dorg -Ssuccess-only 2024-03-21 00:42:03,426 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:03,426 [ scc.repo] DEBUG ## PRs found: 2024-03-21 00:42:03,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-03-21 00:42:04,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-03-21 00:42:04,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-03-21 00:42:05,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-03-21 00:42:05,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-21 00:42:06,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-03-21 00:42:06,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-03-21 00:42:06,603 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-03-21 00:42:06,603 [ scc.repo] DEBUG ## Branches found: 2024-03-21 00:42:06,603 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-03-21 00:42:06,604 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:06,604 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:06,610 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-21 00:42:06,615 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-21 00:42:06,615 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-21 00:42:06,621 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-21 00:42:06,628 [ scc.git] DEBUG Already up to date. 2024-03-21 00:42:06,628 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-03-21 00:42:07,108 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-03-21 00:42:07,108 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-03-21 00:42:07,113 [ scc.git] DEBUG ## Unique users: [] 2024-03-21 00:42:07,113 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:07,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:07,119 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-03-21 00:42:07,126 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:07,132 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-03-21 00:42:07,169 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-21 00:42:07,173 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-03-21 00:42:07,173 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-03-21 00:42:07,173 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-03-21 00:42:07,173 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-03-21 00:42:07,174 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-03-21 00:42:07,174 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-03-21 00:42:07,174 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-03-21 00:42:07,174 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-03-21 00:42:07,174 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-03-21 00:42:07,174 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-03-21 00:42:07,174 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-03-21 00:42:07,176 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-03-21 00:42:07,176 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-03-21 00:42:07,176 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-03-21 00:42:07,176 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-03-21 00:42:07,176 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-03-21 00:42:07,176 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-03-21 00:42:07,176 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-03-21 00:42:07,177 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-03-21 00:42:07,177 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-03-21 00:42:07,177 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-03-21 00:42:07,177 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-03-21 00:42:07,177 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-03-21 00:42:07,177 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-03-21 00:42:07,177 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-03-21 00:42:07,177 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-03-21 00:42:07,177 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-03-21 00:42:07,177 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-03-21 00:42:07,177 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-03-21 00:42:07,177 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-03-21 00:42:07,177 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-03-21 00:42:07,177 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-03-21 00:42:07,177 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-03-21 00:42:07,177 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-03-21 00:42:07,177 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-03-21 00:42:07,177 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-03-21 00:42:07,177 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-03-21 00:42:07,177 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-03-21 00:42:07,177 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-03-21 00:42:07,177 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-03-21 00:42:07,177 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-03-21 00:42:07,177 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-03-21 00:42:07,177 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-03-21 00:42:07,177 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-03-21 00:42:07,177 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-03-21 00:42:07,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:07,327 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-21 00:42:07,373 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:07,373 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:07,379 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:42:07,424 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-21 00:42:07,432 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41d8340f10> has no local changes 2024-03-21 00:42:07,432 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/)' 2024-03-21 00:42:07,442 [ scc.git] DEBUG [detached HEAD 47a54af] merge master -Dorg -Ssuccess-only 2024-03-21 00:42:07,443 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:07,443 [ scc.repo] DEBUG ## PRs found: 2024-03-21 00:42:07,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-03-21 00:42:07,763 [ scc.repo] DEBUG ## Branches found: 2024-03-21 00:42:07,763 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-03-21 00:42:07,763 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:07,763 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:07,769 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-21 00:42:07,774 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-21 00:42:07,774 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-21 00:42:07,779 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-21 00:42:07,785 [ scc.git] DEBUG Already up to date. 2024-03-21 00:42:07,786 [ scc.git] DEBUG ## Unique users: [] 2024-03-21 00:42:07,786 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:07,786 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:07,791 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-21 00:42:07,834 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:07,834 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:07,840 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:42:07,881 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-21 00:42:07,886 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41d8295fa0> has no local changes 2024-03-21 00:42:07,887 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/)' 2024-03-21 00:42:07,894 [ scc.git] DEBUG [detached HEAD d868ae9] merge master -Dorg -Ssuccess-only 2024-03-21 00:42:07,894 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:07,894 [ scc.repo] DEBUG ## PRs found: 2024-03-21 00:42:08,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-03-21 00:42:08,181 [ scc.repo] DEBUG ## Branches found: 2024-03-21 00:42:08,182 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-03-21 00:42:08,182 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:08,182 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:08,189 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-21 00:42:08,195 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-21 00:42:08,195 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-21 00:42:08,202 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-21 00:42:08,209 [ scc.git] DEBUG Already up to date. 2024-03-21 00:42:08,210 [ scc.git] DEBUG ## Unique users: [] 2024-03-21 00:42:08,210 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:08,210 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:08,216 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-21 00:42:08,258 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:08,259 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:08,264 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:42:08,303 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-21 00:42:08,309 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41d8295550> has no local changes 2024-03-21 00:42:08,310 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/)' 2024-03-21 00:42:08,320 [ scc.git] DEBUG [detached HEAD 6ca6a77] merge master -Dorg -Ssuccess-only 2024-03-21 00:42:08,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:08,320 [ scc.git] INFO Overriding base-branch from master to main 2024-03-21 00:42:08,321 [ scc.repo] DEBUG ## PRs found: 2024-03-21 00:42:08,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-03-21 00:42:09,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-03-21 00:42:09,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-03-21 00:42:10,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-03-21 00:42:10,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-03-21 00:42:11,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-21 00:42:11,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-21 00:42:11,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-03-21 00:42:12,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-03-21 00:42:12,363 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-03-21 00:42:12,364 [ scc.repo] DEBUG ## Branches found: 2024-03-21 00:42:12,364 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-03-21 00:42:12,364 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:12,364 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:12,369 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-03-21 00:42:12,374 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-21 00:42:12,374 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-03-21 00:42:12,380 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-03-21 00:42:12,385 [ scc.git] DEBUG Already up to date. 2024-03-21 00:42:12,386 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-03-21 00:42:12,825 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-03-21 00:42:12,825 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-03-21 00:42:12,831 [ scc.git] DEBUG ## Unique users: [] 2024-03-21 00:42:12,831 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:12,831 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:12,837 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-03-21 00:42:12,843 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:12,847 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-03-21 00:42:12,879 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-03-21 00:42:12,879 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-03-21 00:42:12,879 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-03-21 00:42:12,880 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-03-21 00:42:12,886 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-03-21 00:42:12,893 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-03-21 00:42:13,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:13,045 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-03-21 00:42:13,052 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-03-21 00:42:13,058 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#6](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-03-21 00:42:13,063 [ scc.config] DEBUG Found github.token 2024-03-21 00:42:13,063 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-03-21 00:42:13,063 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-21 00:42:13,105 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:13,105 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:13,111 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:42:13,154 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-21 00:42:13,161 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41d82447c0> has no local changes 2024-03-21 00:42:13,161 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/)' 2024-03-21 00:42:13,170 [ scc.git] DEBUG [detached HEAD 1d72e14] merge master -Dorg -Ssuccess-only 2024-03-21 00:42:13,171 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:13,171 [ scc.repo] DEBUG ## PRs found: 2024-03-21 00:42:13,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-03-21 00:42:13,472 [ scc.repo] DEBUG ## Branches found: 2024-03-21 00:42:13,472 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-03-21 00:42:13,472 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:13,472 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:13,478 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-21 00:42:13,485 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-21 00:42:13,485 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-21 00:42:13,492 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-21 00:42:13,499 [ scc.git] DEBUG Already up to date. 2024-03-21 00:42:13,499 [ scc.git] DEBUG ## Unique users: [] 2024-03-21 00:42:13,499 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:13,499 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:13,504 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-21 00:42:13,548 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:13,548 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:13,553 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:42:13,595 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-21 00:42:13,601 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41d829c4f0> has no local changes 2024-03-21 00:42:13,601 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/)' 2024-03-21 00:42:13,611 [ scc.git] DEBUG [detached HEAD cfc5ee8] merge master -Dorg -Ssuccess-only 2024-03-21 00:42:13,611 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:13,611 [ scc.repo] DEBUG ## PRs found: 2024-03-21 00:42:13,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-03-21 00:42:13,876 [ scc.repo] DEBUG ## Branches found: 2024-03-21 00:42:13,876 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-03-21 00:42:13,876 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:13,876 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:13,882 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-21 00:42:13,887 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-21 00:42:13,887 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-21 00:42:13,893 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-21 00:42:13,899 [ scc.git] DEBUG Already up to date. 2024-03-21 00:42:13,899 [ scc.git] DEBUG ## Unique users: [] 2024-03-21 00:42:13,899 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:13,899 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:13,905 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-21 00:42:13,947 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:13,947 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:13,953 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:42:13,997 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-21 00:42:14,005 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41d8244610> has no local changes 2024-03-21 00:42:14,006 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/)' 2024-03-21 00:42:14,015 [ scc.git] DEBUG [detached HEAD 9df73ae] merge master -Dorg -Ssuccess-only 2024-03-21 00:42:14,015 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:14,015 [ scc.repo] DEBUG ## PRs found: 2024-03-21 00:42:14,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-03-21 00:42:14,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-03-21 00:42:15,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-03-21 00:42:15,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-03-21 00:42:16,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-21 00:42:16,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-03-21 00:42:17,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-03-21 00:42:17,093 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-03-21 00:42:17,093 [ scc.repo] DEBUG ## Branches found: 2024-03-21 00:42:17,093 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-03-21 00:42:17,093 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:17,093 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:17,099 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-21 00:42:17,103 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-21 00:42:17,103 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-21 00:42:17,109 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-21 00:42:17,115 [ scc.git] DEBUG Already up to date. 2024-03-21 00:42:17,116 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-03-21 00:42:17,612 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-03-21 00:42:17,612 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-03-21 00:42:17,617 [ scc.git] DEBUG ## Unique users: [] 2024-03-21 00:42:17,617 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:17,617 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:17,623 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-03-21 00:42:17,630 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:17,636 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-03-21 00:42:17,671 [ scc.git] DEBUG Auto-merging Dockerfile 2024-03-21 00:42:17,671 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-03-21 00:42:17,671 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-03-21 00:42:17,672 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-03-21 00:42:17,679 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-03-21 00:42:17,688 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-03-21 00:42:17,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:17,837 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-03-21 00:42:17,844 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-03-21 00:42:17,851 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#6](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-03-21 00:42:17,857 [ scc.config] DEBUG Found github.token 2024-03-21 00:42:17,857 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-03-21 00:42:17,857 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-21 00:42:17,903 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:17,904 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:17,910 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:42:17,956 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-21 00:42:17,964 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41d81fe4f0> has no local changes 2024-03-21 00:42:17,964 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/)' 2024-03-21 00:42:17,974 [ scc.git] DEBUG [detached HEAD 455ba2d] merge master -Dorg -Ssuccess-only 2024-03-21 00:42:17,974 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:17,975 [ scc.git] INFO Overriding base-branch from master to develop 2024-03-21 00:42:17,975 [ scc.repo] DEBUG ## PRs found: 2024-03-21 00:42:18,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-03-21 00:42:18,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-03-21 00:42:19,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-03-21 00:42:19,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-03-21 00:42:20,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-03-21 00:42:20,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-03-21 00:42:21,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-03-21 00:42:21,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-03-21 00:42:22,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-21 00:42:22,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-03-21 00:42:22,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-03-21 00:42:22,922 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-03-21 00:42:23,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-03-21 00:42:23,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-03-21 00:42:24,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-03-21 00:42:24,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-03-21 00:42:24,812 [ scc.repo] DEBUG ## Branches found: 2024-03-21 00:42:24,812 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-03-21 00:42:24,812 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:24,812 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:24,818 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-03-21 00:42:24,823 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-21 00:42:24,824 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-03-21 00:42:24,829 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-03-21 00:42:24,835 [ scc.git] DEBUG Already up to date. 2024-03-21 00:42:24,835 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-03-21 00:42:25,297 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-03-21 00:42:25,297 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-03-21 00:42:25,303 [ scc.git] DEBUG ## Unique users: [] 2024-03-21 00:42:25,303 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:25,303 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:25,309 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-03-21 00:42:25,318 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:25,324 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-03-21 00:42:25,354 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-03-21 00:42:25,355 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-03-21 00:42:25,355 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-03-21 00:42:25,355 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-03-21 00:42:25,362 [ scc.git] DEBUG Calling 'git reset --hard 2078ac72dbf11f2733e685000a274eff81c2ac2d' 2024-03-21 00:42:25,368 [ scc.git] DEBUG HEAD is now at 2078ac7 Bump version: 5.8.0 → 5.8.1.dev0 2024-03-21 00:42:25,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:25,523 [ scc.git] DEBUG Calling 'git merge-base 2078ac72dbf11f2733e685000a274eff81c2ac2d 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-03-21 00:42:25,532 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..2078ac72dbf11f2733e685000a274eff81c2ac2d' 2024-03-21 00:42:25,538 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#6](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-03-21 00:42:25,543 [ scc.config] DEBUG Found github.token 2024-03-21 00:42:25,543 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-03-21 00:42:25,543 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-21 00:42:25,581 [ scc.git] DEBUG Get sha1 of %s 2024-03-21 00:42:25,581 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-21 00:42:25,587 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:42:25,630 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-21 00:42:25,637 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41d820f2e0> has no local changes 2024-03-21 00:42:25,637 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/)' 2024-03-21 00:42:25,646 [ scc.git] DEBUG [detached HEAD d8dd168] merge master -Dorg -Ssuccess-only 2024-03-21 00:42:25,646 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:25,647 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-21 00:42:25,727 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-03-21 00:42:25,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:25,941 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-03-21 00:42:25,946 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-03-21 00:42:26,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:26,341 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-03-21 00:42:26,346 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-03-21 00:42:26,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:26,755 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-03-21 00:42:26,760 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-03-21 00:42:27,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:27,172 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-03-21 00:42:27,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:27,566 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-03-21 00:42:27,572 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-03-21 00:42:27,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:27,965 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-03-21 00:42:27,970 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-03-21 00:42:28,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:28,359 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-03-21 00:42:28,364 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-03-21 00:42:28,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:28,765 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-03-21 00:42:28,772 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-03-21 00:42:29,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:29,168 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-03-21 00:42:29,173 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-03-21 00:42:29,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:29,580 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-03-21 00:42:29,585 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-03-21 00:42:29,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:29,986 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-03-21 00:42:29,991 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-03-21 00:42:30,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:30,399 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-03-21 00:42:30,403 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-03-21 00:42:30,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:30,805 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-03-21 00:42:31,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:31,218 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-03-21 00:42:31,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:31,618 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-03-21 00:42:31,623 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-03-21 00:42:32,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:32,033 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-03-21 00:42:32,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:32,435 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-03-21 00:42:32,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:32,838 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-03-21 00:42:32,844 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-03-21 00:42:33,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:33,227 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-03-21 00:42:33,232 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-03-21 00:42:33,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:33,635 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-03-21 00:42:33,639 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-03-21 00:42:34,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:34,042 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-03-21 00:42:34,048 [ scc.config] DEBUG Found submodule.scripts.url 2024-03-21 00:42:34,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-21 00:42:34,510 [ scc.config] DEBUG Found submodule.scripts.branch 2024-03-21 00:42:34,510 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-21 00:42:34,602 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41d9ef51f0> has local changes 2024-03-21 00:42:34,602 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 543 will-moore 'Plate well labels' (stage: draft) Already up to date. Merged PRs: - PR 477 will-moore 'Vite' - PR 548 will-moore 'Fix cropping of panel labels and float usage for shape labels' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 456 will-moore 'Don't use tiles for non-big movies' - PR 460 will-moore 'Channel min spinner fix' - PR 464 will-moore 'Tile load error warning' - PR 465 will-moore 'Save as Figure' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#6 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/6/)' 2024-03-21 00:42:34,618 [ scc.git] DEBUG [detached HEAD df804d9] merge master -Dorg -Ssuccess-only 2024-03-21 00:42:34,619 [ scc.merge] INFO Repository: ome/omero-plugins 2024-03-21 00:42:34,619 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-03-21 00:42:34,619 [ scc.merge] INFO Already up to date. 2024-03-21 00:42:34,619 [ scc.merge] INFO 2024-03-21 00:42:34,619 [ scc.merge] INFO 2024-03-21 00:42:34,619 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-03-21 00:42:34,619 [ scc.merge] INFO Already up to date. 2024-03-21 00:42:34,619 [ scc.merge] INFO 2024-03-21 00:42:34,619 [ scc.merge] INFO 2024-03-21 00:42:34,619 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-03-21 00:42:34,619 [ scc.merge] INFO Excluded PRs: 2024-03-21 00:42:34,619 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-03-21 00:42:34,619 [ scc.merge] INFO Already up to date. 2024-03-21 00:42:34,619 [ scc.merge] INFO 2024-03-21 00:42:34,619 [ scc.merge] INFO Merged PRs: 2024-03-21 00:42:34,619 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-03-21 00:42:34,619 [ scc.merge] INFO 2024-03-21 00:42:34,620 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-03-21 00:42:34,620 [ scc.merge] INFO Excluded PRs: 2024-03-21 00:42:34,620 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-03-21 00:42:34,620 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-03-21 00:42:34,620 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-03-21 00:42:34,620 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-03-21 00:42:34,620 [ scc.merge] INFO Already up to date. 2024-03-21 00:42:34,620 [ scc.merge] INFO 2024-03-21 00:42:34,620 [ scc.merge] INFO Merged PRs: 2024-03-21 00:42:34,620 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-03-21 00:42:34,620 [ scc.merge] INFO 2024-03-21 00:42:34,620 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-03-21 00:42:34,620 [ scc.merge] INFO Excluded PRs: 2024-03-21 00:42:34,620 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-03-21 00:42:34,620 [ scc.merge] INFO Already up to date. 2024-03-21 00:42:34,620 [ scc.merge] INFO 2024-03-21 00:42:34,620 [ scc.merge] INFO Merged PRs: 2024-03-21 00:42:34,620 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-03-21 00:42:34,620 [ scc.merge] INFO 2024-03-21 00:42:34,620 [ scc.merge] INFO Conflicting PRs (not included): 2024-03-21 00:42:34,620 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-03-21 00:42:34,620 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-03-21 00:42:34,620 [ scc.merge] INFO 2024-03-21 00:42:34,620 [ scc.merge] INFO Repository: ome/omero-figure 2024-03-21 00:42:34,620 [ scc.merge] INFO Excluded PRs: 2024-03-21 00:42:34,620 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (stage: draft) 2024-03-21 00:42:34,620 [ scc.merge] INFO Already up to date. 2024-03-21 00:42:34,620 [ scc.merge] INFO 2024-03-21 00:42:34,620 [ scc.merge] INFO Merged PRs: 2024-03-21 00:42:34,620 [ scc.merge] INFO - PR 477 will-moore 'Vite' 2024-03-21 00:42:34,620 [ scc.merge] INFO - PR 548 will-moore 'Fix cropping of panel labels and float usage for shape labels' 2024-03-21 00:42:34,620 [ scc.merge] INFO 2024-03-21 00:42:34,620 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-03-21 00:42:34,620 [ scc.merge] INFO Already up to date. 2024-03-21 00:42:34,620 [ scc.merge] INFO 2024-03-21 00:42:34,620 [ scc.merge] INFO Merged PRs: 2024-03-21 00:42:34,620 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-03-21 00:42:34,620 [ scc.merge] INFO 2024-03-21 00:42:34,620 [ scc.merge] INFO Repository: ome/omero-gallery 2024-03-21 00:42:34,621 [ scc.merge] INFO Already up to date. 2024-03-21 00:42:34,621 [ scc.merge] INFO 2024-03-21 00:42:34,621 [ scc.merge] INFO Merged PRs: 2024-03-21 00:42:34,621 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-03-21 00:42:34,621 [ scc.merge] INFO 2024-03-21 00:42:34,621 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-03-21 00:42:34,621 [ scc.merge] INFO Excluded PRs: 2024-03-21 00:42:34,621 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-03-21 00:42:34,621 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-03-21 00:42:34,621 [ scc.merge] INFO Already up to date. 2024-03-21 00:42:34,621 [ scc.merge] INFO 2024-03-21 00:42:34,621 [ scc.merge] INFO Merged PRs: 2024-03-21 00:42:34,621 [ scc.merge] INFO - PR 456 will-moore 'Don't use tiles for non-big movies' 2024-03-21 00:42:34,621 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-03-21 00:42:34,621 [ scc.merge] INFO - PR 464 will-moore 'Tile load error warning' 2024-03-21 00:42:34,621 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-03-21 00:42:34,621 [ scc.merge] INFO 2024-03-21 00:42:34,621 [ scc.merge] INFO Repository: ome/omero-mapr 2024-03-21 00:42:34,621 [ scc.merge] INFO Excluded PRs: 2024-03-21 00:42:34,621 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-03-21 00:42:34,621 [ scc.merge] INFO Already up to date. 2024-03-21 00:42:34,621 [ scc.merge] INFO 2024-03-21 00:42:34,621 [ scc.merge] INFO Merged PRs: 2024-03-21 00:42:34,621 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-03-21 00:42:34,621 [ scc.merge] INFO 2024-03-21 00:42:34,621 [ scc.merge] INFO Repository: ome/omero-metadata 2024-03-21 00:42:34,621 [ scc.merge] INFO Already up to date. 2024-03-21 00:42:34,621 [ scc.merge] INFO 2024-03-21 00:42:34,621 [ scc.merge] INFO Conflicting PRs (not included): 2024-03-21 00:42:34,621 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-03-21 00:42:34,621 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-03-21 00:42:34,621 [ scc.merge] INFO 2024-03-21 00:42:34,621 [ scc.merge] INFO Repository: ome/omero-parade 2024-03-21 00:42:34,621 [ scc.merge] INFO Excluded PRs: 2024-03-21 00:42:34,621 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-03-21 00:42:34,621 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-03-21 00:42:34,621 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-03-21 00:42:34,621 [ scc.merge] INFO Already up to date. 2024-03-21 00:42:34,621 [ scc.merge] INFO 2024-03-21 00:42:34,622 [ scc.merge] INFO Merged PRs: 2024-03-21 00:42:34,622 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-03-21 00:42:34,622 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-03-21 00:42:34,622 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-03-21 00:42:34,622 [ scc.merge] INFO 2024-03-21 00:42:34,622 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-03-21 00:42:34,622 [ scc.merge] INFO Already up to date. 2024-03-21 00:42:34,622 [ scc.merge] INFO 2024-03-21 00:42:34,622 [ scc.merge] INFO Merged PRs: 2024-03-21 00:42:34,622 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-03-21 00:42:34,622 [ scc.merge] INFO 2024-03-21 00:42:34,622 [ scc.merge] INFO Repository: ome/omero-rois 2024-03-21 00:42:34,622 [ scc.merge] INFO Excluded PRs: 2024-03-21 00:42:34,622 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-03-21 00:42:34,622 [ scc.merge] INFO Already up to date. 2024-03-21 00:42:34,622 [ scc.merge] INFO 2024-03-21 00:42:34,622 [ scc.merge] INFO Merged PRs: 2024-03-21 00:42:34,622 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-03-21 00:42:34,622 [ scc.merge] INFO 2024-03-21 00:42:34,622 [ scc.merge] INFO Repository: ome/omero-signup 2024-03-21 00:42:34,622 [ scc.merge] INFO Already up to date. 2024-03-21 00:42:34,622 [ scc.merge] INFO 2024-03-21 00:42:34,622 [ scc.merge] INFO Conflicting PRs (not included): 2024-03-21 00:42:34,622 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-03-21 00:42:34,622 [ scc.merge] INFO 2024-03-21 00:42:34,622 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-03-21 00:42:34,622 [ scc.merge] INFO Already up to date. 2024-03-21 00:42:34,622 [ scc.merge] INFO 2024-03-21 00:42:34,622 [ scc.merge] INFO Merged PRs: 2024-03-21 00:42:34,622 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-03-21 00:42:34,622 [ scc.merge] INFO 2024-03-21 00:42:34,622 [ scc.merge] INFO Repository: ome/omero-upload 2024-03-21 00:42:34,622 [ scc.merge] INFO Already up to date. 2024-03-21 00:42:34,622 [ scc.merge] INFO 2024-03-21 00:42:34,622 [ scc.merge] INFO 2024-03-21 00:42:34,623 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-03-21 00:42:34,623 [ scc.merge] INFO Already up to date. 2024-03-21 00:42:34,623 [ scc.merge] INFO 2024-03-21 00:42:34,623 [ scc.merge] INFO 2024-03-21 00:42:34,623 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-03-21 00:42:34,623 [ scc.merge] INFO Excluded PRs: 2024-03-21 00:42:34,623 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-03-21 00:42:34,623 [ scc.merge] INFO Already up to date. 2024-03-21 00:42:34,623 [ scc.merge] INFO 2024-03-21 00:42:34,623 [ scc.merge] INFO Conflicting PRs (not included): 2024-03-21 00:42:34,623 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-03-21 00:42:34,623 [ scc.merge] INFO 2024-03-21 00:42:34,623 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-03-21 00:42:34,623 [ scc.merge] INFO Already up to date. 2024-03-21 00:42:34,623 [ scc.merge] INFO 2024-03-21 00:42:34,623 [ scc.merge] INFO 2024-03-21 00:42:34,623 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-03-21 00:42:34,623 [ scc.merge] INFO Already up to date. 2024-03-21 00:42:34,623 [ scc.merge] INFO 2024-03-21 00:42:34,623 [ scc.merge] INFO 2024-03-21 00:42:34,623 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-03-21 00:42:34,623 [ scc.merge] INFO Already up to date. 2024-03-21 00:42:34,623 [ scc.merge] INFO 2024-03-21 00:42:34,623 [ scc.merge] INFO Conflicting PRs (not included): 2024-03-21 00:42:34,623 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-03-21 00:42:34,624 [ scc.merge] INFO 2024-03-21 00:42:34,624 [ scc.merge] INFO Repository: ome/scripts 2024-03-21 00:42:34,624 [ scc.merge] INFO Excluded PRs: 2024-03-21 00:42:34,624 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-03-21 00:42:34,624 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-03-21 00:42:34,624 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-03-21 00:42:34,624 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-03-21 00:42:34,624 [ scc.merge] INFO Already up to date. 2024-03-21 00:42:34,624 [ scc.merge] INFO 2024-03-21 00:42:34,624 [ scc.merge] INFO Conflicting PRs (not included): 2024-03-21 00:42:34,624 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-03-21 00:42:34,624 [ scc.merge] INFO 2024-03-21 00:42:34,624 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-03-21 00:42:34,624 [ scc.git] DEBUG Calling 'git remote' 2024-03-21 00:42:34,630 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-03-21 00:42:34,630 [ scc.git] DEBUG Calling 'git remote' 2024-03-21 00:42:34,636 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:34,636 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-03-21 00:42:34,636 [ scc.git] DEBUG Calling 'git remote' 2024-03-21 00:42:34,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:34,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-03-21 00:42:34,641 [ scc.git] DEBUG Calling 'git remote' 2024-03-21 00:42:34,645 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:34,646 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-03-21 00:42:34,646 [ scc.git] DEBUG Calling 'git remote' 2024-03-21 00:42:34,650 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:34,650 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-03-21 00:42:34,651 [ scc.git] DEBUG Calling 'git remote' 2024-03-21 00:42:34,655 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:34,655 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-03-21 00:42:34,655 [ scc.git] DEBUG Calling 'git remote' 2024-03-21 00:42:34,660 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:34,660 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-03-21 00:42:34,660 [ scc.git] DEBUG Calling 'git remote' 2024-03-21 00:42:34,665 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:34,665 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-03-21 00:42:34,665 [ scc.git] DEBUG Calling 'git remote' 2024-03-21 00:42:34,672 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:34,672 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-03-21 00:42:34,672 [ scc.git] DEBUG Calling 'git remote' 2024-03-21 00:42:34,677 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:34,677 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-03-21 00:42:34,677 [ scc.git] DEBUG Calling 'git remote' 2024-03-21 00:42:34,683 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:34,683 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-03-21 00:42:34,683 [ scc.git] DEBUG Calling 'git remote' 2024-03-21 00:42:34,688 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:34,688 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-03-21 00:42:34,688 [ scc.git] DEBUG Calling 'git remote' 2024-03-21 00:42:34,693 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:34,693 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-03-21 00:42:34,693 [ scc.git] DEBUG Calling 'git remote' 2024-03-21 00:42:34,699 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:34,699 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-03-21 00:42:34,699 [ scc.git] DEBUG Calling 'git remote' 2024-03-21 00:42:34,704 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:34,704 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-03-21 00:42:34,704 [ scc.git] DEBUG Calling 'git remote' 2024-03-21 00:42:34,710 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:34,710 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-03-21 00:42:34,711 [ scc.git] DEBUG Calling 'git remote' 2024-03-21 00:42:34,716 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:34,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-03-21 00:42:34,717 [ scc.git] DEBUG Calling 'git remote' 2024-03-21 00:42:34,723 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:34,723 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-03-21 00:42:34,723 [ scc.git] DEBUG Calling 'git remote' 2024-03-21 00:42:34,728 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:34,728 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-03-21 00:42:34,728 [ scc.git] DEBUG Calling 'git remote' 2024-03-21 00:42:34,733 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:34,733 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-03-21 00:42:34,733 [ scc.git] DEBUG Calling 'git remote' 2024-03-21 00:42:34,738 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:34,738 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-03-21 00:42:34,738 [ scc.git] DEBUG Calling 'git remote' 2024-03-21 00:42:34,743 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-03-21 00:42:34,743 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-03-21 00:42:34,744 [ scc.git] DEBUG Calling 'git remote' 2024-03-21 00:42:34,749 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.8.2 to 5.9.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD bc91ba3] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 2ca566b Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 3b7ccfa8 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a232ed0 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from a0148a6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 2078ac7 nothing to commit, working tree clean [detached HEAD 25817cb] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-03-21 00:43:22,258 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-03-21 00:43:31,217 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-03-21 00:43:33,525 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-03-21 00:43:38,146 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-03-21 00:44:25,531 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS