Started by upstream project "Trigger" build number 101 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/80042be2aab2f4c47851263660cdf7971582cd0b3548009ec2196c6f3069ef1a/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 77 [Pipeline] sh > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.0.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.0.1 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.11.0-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-46.0.5-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (39 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.2.25-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.8.1-py3-none-any.whl (432 kB) Using cached pyjwt-2.11.0-py3-none-any.whl (28 kB) Using cached cryptography-46.0.5-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (193 kB) Using cached idna-3.11-py3-none-any.whl (71 kB) Using cached certifi-2026.2.25-py3-none-any.whl (153 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.0-py3-none-any.whl (48 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2026.2.25 cffi-2.0.0 charset_normalizer-3.4.5 cryptography-46.0.5 future-1.0.0 idna-3.11 pycparser-3.0 pyjwt-2.11.0 pynacl-1.6.2 requests-2.32.5 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-03-11 00:43:03,043 [ scc.config] DEBUG Found github.token 2026-03-11 00:43:03,044 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-03-11 00:43:03,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:43:03,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:43:04,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-03-11 00:43:04,036 [ scc.gh] DEBUG 4918 remaining from 5000 (Reset at 01:03 2026-03-11 00:43:04,037 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-11 00:43:04,040 [ scc.git] DEBUG Check current status 2026-03-11 00:43:04,040 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-11 00:43:04,042 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-03-11 00:43:04,043 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-11 00:43:04,087 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-03-11 00:43:04,090 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-03-11 00:43:04,093 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-03-11 00:43:04,096 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-03-11 00:43:04,100 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-03-11 00:43:04,102 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-03-11 00:43:04,105 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-03-11 00:43:04,108 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-03-11 00:43:04,111 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-03-11 00:43:04,114 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-03-11 00:43:04,116 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-03-11 00:43:04,119 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-03-11 00:43:04,122 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-03-11 00:43:04,125 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-03-11 00:43:04,128 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-03-11 00:43:04,131 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-03-11 00:43:04,133 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-03-11 00:43:04,135 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-03-11 00:43:04,138 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-03-11 00:43:04,141 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-03-11 00:43:04,143 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-03-11 00:43:04,147 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-03-11 00:43:04,149 [ scc.config] DEBUG Found remote.origin.url 2026-03-11 00:43:04,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-03-11 00:43:05,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-11 00:43:05,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-11 00:43:05,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-11 00:43:06,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-11 00:43:06,286 [ scc.git] DEBUG Resetting... 2026-03-11 00:43:06,286 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-03-11 00:43:06,293 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-03-11 00:43:06,294 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-03-11 00:43:06,390 [ scc.git] DEBUG Check current status 2026-03-11 00:43:06,390 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-11 00:43:06,392 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-03-11 00:43:06,392 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-11 00:43:06,436 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-03-11 00:43:06,439 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-03-11 00:43:06,441 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-03-11 00:43:06,445 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-03-11 00:43:06,448 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-03-11 00:43:06,451 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-03-11 00:43:06,454 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-03-11 00:43:06,457 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-03-11 00:43:06,460 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-03-11 00:43:06,462 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-03-11 00:43:06,465 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-03-11 00:43:06,468 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-03-11 00:43:06,471 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-03-11 00:43:06,474 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-03-11 00:43:06,477 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-03-11 00:43:06,480 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-03-11 00:43:06,482 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-03-11 00:43:06,485 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-03-11 00:43:06,487 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-03-11 00:43:06,490 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-03-11 00:43:06,492 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-03-11 00:43:06,496 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-03-11 00:43:06,497 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-03-11 00:43:06,497 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-03-11 00:43:06,497 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-03-11 00:43:06,497 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-03-11 00:43:06,497 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-03-11 00:43:06,497 [ scc.repo] DEBUG ## PRs found: 2026-03-11 00:43:06,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-03-11 00:43:07,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-03-11 00:43:07,375 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-11 00:43:07,375 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-03-11 00:43:07,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-03-11 00:43:07,897 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-11 00:43:07,897 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-03-11 00:43:08,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-03-11 00:43:08,432 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-11 00:43:08,432 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-03-11 00:43:08,432 [ scc.repo] DEBUG ## Branches found: 2026-03-11 00:43:08,432 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:43:08,432 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:43:08,434 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-11 00:43:08,437 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-11 00:43:08,437 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-11 00:43:08,439 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-11 00:43:08,442 [ scc.git] DEBUG Already up to date. 2026-03-11 00:43:08,442 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-03-11 00:43:08,726 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-11 00:43:08,726 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-03-11 00:43:08,730 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-03-11 00:43:09,132 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-11 00:43:09,132 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-03-11 00:43:09,137 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-03-11 00:43:09,520 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-11 00:43:09,520 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-03-11 00:43:09,524 [ scc.git] DEBUG ## Unique users: [] 2026-03-11 00:43:09,524 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:43:09,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:43:09,526 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-03-11 00:43:09,529 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:43:09,531 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-03-11 00:43:09,545 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:43:09,548 [ scc.git] DEBUG scripts | 2 +- 2026-03-11 00:43:09,548 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-11 00:43:09,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:43:09,717 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-03-11 00:43:09,719 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:43:09,722 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-03-11 00:43:09,806 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:43:09,808 [ scc.git] DEBUG omero-figure | 2 +- 2026-03-11 00:43:09,808 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-11 00:43:10,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:43:10,122 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-03-11 00:43:10,125 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:43:10,127 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-03-11 00:43:10,142 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:43:10,144 [ scc.git] DEBUG omero-iviewer | 2 +- 2026-03-11 00:43:10,144 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-11 00:43:10,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:43:10,528 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-11 00:43:10,590 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-03-11 00:43:10,610 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-03-11 00:43:10,623 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-03-11 00:43:10,624 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:43:10,624 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:43:10,626 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-11 00:43:11,426 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f38bf12e750> has no local changes 2026-03-11 00:43:11,426 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#85 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/)' 2026-03-11 00:43:11,498 [ scc.git] DEBUG [detached HEAD 6177d36] merge master -Dorg -Snone 2026-03-11 00:43:11,498 [ scc.merge] INFO Repository: ome/omero-plugins 2026-03-11 00:43:11,498 [ scc.merge] INFO Already up to date. 2026-03-11 00:43:11,498 [ scc.merge] INFO 2026-03-11 00:43:11,498 [ scc.merge] INFO Merged PRs: 2026-03-11 00:43:11,498 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-03-11 00:43:11,498 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-03-11 00:43:11,498 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-03-11 00:43:11,498 [ scc.merge] INFO 2026-03-11 00:43:11,498 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-03-11 00:43:11,498 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' Submodule path 'omero-cli-zarr': checked out '9f844b877d8e19e42a69d7ba43f7dc086680fbec' Submodule path 'omero-figure': checked out 'acada9be0cc8759f88dbfd89e8f1f7d69955749c' Submodule path 'omero-iviewer': checked out '5e2de43ad401fb00690a79644056e0ac15fabfd5' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-rois': checked out 'fc9ff96901ce7b92e3ba51327ba7ba64fff76959' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2026-03-11 00:43:20,901 [ scc.config] DEBUG Found github.token 2026-03-11 00:43:20,902 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-03-11 00:43:21,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:43:21,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:43:21,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-03-11 00:43:21,897 [ scc.gh] DEBUG 4904 remaining from 5000 (Reset at 01:03 2026-03-11 00:43:21,897 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-11 00:43:21,900 [ scc.git] DEBUG Check current status 2026-03-11 00:43:21,900 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-11 00:43:21,903 [ scc.git] DEBUG 6177d36 merge master -Dorg -Snone 2026-03-11 00:43:21,903 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-11 00:43:21,951 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-03-11 00:43:21,954 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-03-11 00:43:21,957 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2026-03-11 00:43:21,960 [ scc.git] DEBUG +9f844b877d8e19e42a69d7ba43f7dc086680fbec omero-cli-zarr (v0.8.0-1-g9f844b8) 2026-03-11 00:43:21,964 [ scc.git] DEBUG +acada9be0cc8759f88dbfd89e8f1f7d69955749c omero-figure (v7.4.1-1-gacada9be) 2026-03-11 00:43:21,967 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-03-11 00:43:21,969 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-03-11 00:43:21,973 [ scc.git] DEBUG +5e2de43ad401fb00690a79644056e0ac15fabfd5 omero-iviewer (v0.16.0-20-g5e2de43) 2026-03-11 00:43:21,976 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-03-11 00:43:21,978 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2026-03-11 00:43:21,981 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-03-11 00:43:21,984 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-03-11 00:43:21,987 [ scc.git] DEBUG +fc9ff96901ce7b92e3ba51327ba7ba64fff76959 omero-rois (v0.4.1-1-gfc9ff96) 2026-03-11 00:43:21,990 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-03-11 00:43:21,993 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2026-03-11 00:43:21,995 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-03-11 00:43:21,998 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2026-03-11 00:43:22,000 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2026-03-11 00:43:22,003 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-03-11 00:43:22,005 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-03-11 00:43:22,008 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-03-11 00:43:22,012 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 scripts (v5.10.0-1-g5b4d768) 2026-03-11 00:43:22,015 [ scc.config] DEBUG Found remote.origin.url 2026-03-11 00:43:22,015 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-03-11 00:43:22,016 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2026-03-11 00:43:22,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-03-11 00:43:22,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-11 00:43:23,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-11 00:43:23,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-11 00:43:24,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-11 00:43:24,164 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:43:24,238 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-03-11 00:43:24,238 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-11 00:43:24,241 [ scc.git] DEBUG Check current status 2026-03-11 00:43:24,241 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-11 00:43:24,243 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2026-03-11 00:43:24,243 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-11 00:43:24,281 [ scc.config] DEBUG Found remote.origin.url 2026-03-11 00:43:24,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2026-03-11 00:43:25,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-11 00:43:26,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-11 00:43:26,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-11 00:43:27,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-11 00:43:27,109 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:43:27,149 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:43:27,150 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-03-11 00:43:27,150 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-11 00:43:27,152 [ scc.git] DEBUG Check current status 2026-03-11 00:43:27,152 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-11 00:43:27,154 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2026-03-11 00:43:27,154 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-11 00:43:27,194 [ scc.config] DEBUG Found remote.origin.url 2026-03-11 00:43:27,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2026-03-11 00:43:28,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-11 00:43:28,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-11 00:43:28,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-11 00:43:29,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-11 00:43:29,433 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:43:29,472 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:43:29,472 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-03-11 00:43:29,472 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-11 00:43:29,474 [ scc.git] DEBUG Check current status 2026-03-11 00:43:29,474 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-11 00:43:29,476 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2026-03-11 00:43:29,477 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-11 00:43:29,515 [ scc.config] DEBUG Found remote.origin.url 2026-03-11 00:43:29,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2026-03-11 00:43:30,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-11 00:43:30,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-11 00:43:31,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-11 00:43:31,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-11 00:43:31,653 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:43:31,693 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:43:31,693 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-03-11 00:43:31,693 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-11 00:43:31,695 [ scc.git] DEBUG Check current status 2026-03-11 00:43:31,695 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-11 00:43:31,698 [ scc.git] DEBUG 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-03-11 00:43:31,698 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-11 00:43:31,738 [ scc.config] DEBUG Found remote.origin.url 2026-03-11 00:43:32,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2026-03-11 00:43:32,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-11 00:43:33,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-11 00:43:33,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-11 00:43:33,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-11 00:43:33,938 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:43:33,977 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:43:33,978 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-03-11 00:43:33,978 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-11 00:43:33,980 [ scc.git] DEBUG Check current status 2026-03-11 00:43:33,980 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-11 00:43:33,983 [ scc.git] DEBUG acada9be Bump version: 7.4.1 → 7.4.2.dev0 2026-03-11 00:43:33,983 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-11 00:43:34,022 [ scc.config] DEBUG Found remote.origin.url 2026-03-11 00:43:34,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2026-03-11 00:43:34,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-11 00:43:35,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-11 00:43:35,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-11 00:43:36,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-11 00:43:36,200 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:43:36,239 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:43:36,239 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-03-11 00:43:36,239 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-11 00:43:36,242 [ scc.git] DEBUG Check current status 2026-03-11 00:43:36,242 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-11 00:43:36,244 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2026-03-11 00:43:36,244 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-11 00:43:36,283 [ scc.config] DEBUG Found remote.origin.url 2026-03-11 00:43:36,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2026-03-11 00:43:37,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-11 00:43:37,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-11 00:43:38,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-11 00:43:38,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-11 00:43:38,443 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:43:38,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:43:38,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-03-11 00:43:38,483 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-11 00:43:38,485 [ scc.git] DEBUG Check current status 2026-03-11 00:43:38,485 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-11 00:43:38,487 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2026-03-11 00:43:38,487 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-11 00:43:38,528 [ scc.config] DEBUG Found remote.origin.url 2026-03-11 00:43:38,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2026-03-11 00:43:39,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-11 00:43:40,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-11 00:43:40,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-11 00:43:40,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-11 00:43:40,973 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:43:41,012 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:43:41,013 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-03-11 00:43:41,013 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-11 00:43:41,015 [ scc.git] DEBUG Check current status 2026-03-11 00:43:41,015 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-11 00:43:41,017 [ scc.git] DEBUG 5e2de43 Merge pull request #510 from joshmoore/issue-509 2026-03-11 00:43:41,017 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-11 00:43:41,056 [ scc.config] DEBUG Found remote.origin.url 2026-03-11 00:43:41,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2026-03-11 00:43:42,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-11 00:43:42,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-11 00:43:42,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-11 00:43:43,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-11 00:43:43,291 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:43:43,331 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:43:43,331 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-03-11 00:43:43,331 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-11 00:43:43,333 [ scc.git] DEBUG Check current status 2026-03-11 00:43:43,333 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-11 00:43:43,335 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2026-03-11 00:43:43,336 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-11 00:43:43,375 [ scc.config] DEBUG Found remote.origin.url 2026-03-11 00:43:43,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2026-03-11 00:43:44,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-11 00:43:44,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-11 00:43:45,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-11 00:43:45,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-11 00:43:45,569 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:43:45,608 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:43:45,609 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-03-11 00:43:45,609 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-11 00:43:45,611 [ scc.git] DEBUG Check current status 2026-03-11 00:43:45,611 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-11 00:43:45,613 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-03-11 00:43:45,614 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-11 00:43:45,652 [ scc.config] DEBUG Found remote.origin.url 2026-03-11 00:43:46,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2026-03-11 00:43:46,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-11 00:43:47,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-11 00:43:47,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-11 00:43:47,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-11 00:43:47,914 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:43:47,952 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:43:47,953 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-03-11 00:43:47,953 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-11 00:43:47,955 [ scc.git] DEBUG Check current status 2026-03-11 00:43:47,955 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-11 00:43:47,957 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2026-03-11 00:43:47,958 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-11 00:43:47,997 [ scc.config] DEBUG Found remote.origin.url 2026-03-11 00:43:48,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2026-03-11 00:43:48,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-11 00:43:49,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-11 00:43:49,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-11 00:43:50,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-11 00:43:50,239 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:43:50,277 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:43:50,277 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-03-11 00:43:50,278 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-11 00:43:50,280 [ scc.git] DEBUG Check current status 2026-03-11 00:43:50,280 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-11 00:43:50,282 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2026-03-11 00:43:50,282 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-11 00:43:50,320 [ scc.config] DEBUG Found remote.origin.url 2026-03-11 00:43:50,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2026-03-11 00:43:51,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-11 00:43:51,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-11 00:43:52,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-11 00:43:52,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-11 00:43:52,496 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:43:52,534 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:43:52,534 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-03-11 00:43:52,535 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-11 00:43:52,537 [ scc.git] DEBUG Check current status 2026-03-11 00:43:52,537 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-11 00:43:52,539 [ scc.git] DEBUG fc9ff96 Bump version: 0.4.1 → 0.4.2.dev0 2026-03-11 00:43:52,539 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-11 00:43:52,579 [ scc.config] DEBUG Found remote.origin.url 2026-03-11 00:43:52,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2026-03-11 00:43:53,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-11 00:43:53,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-11 00:43:54,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-11 00:43:54,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-11 00:43:54,843 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:43:54,882 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:43:54,882 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-03-11 00:43:54,882 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-11 00:43:54,884 [ scc.git] DEBUG Check current status 2026-03-11 00:43:54,884 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-11 00:43:54,886 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2026-03-11 00:43:54,887 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-11 00:43:54,926 [ scc.config] DEBUG Found remote.origin.url 2026-03-11 00:43:55,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2026-03-11 00:43:55,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-11 00:43:56,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-11 00:43:56,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-11 00:43:57,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-11 00:43:57,205 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:43:57,243 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:43:57,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-03-11 00:43:57,244 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-11 00:43:57,246 [ scc.git] DEBUG Check current status 2026-03-11 00:43:57,246 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-11 00:43:57,248 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2026-03-11 00:43:57,248 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-11 00:43:57,287 [ scc.config] DEBUG Found remote.origin.url 2026-03-11 00:43:57,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-03-11 00:43:57,629 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-03-11 00:43:57,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2026-03-11 00:43:58,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-11 00:43:58,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-11 00:43:59,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-11 00:43:59,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-11 00:43:59,619 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:43:59,659 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:43:59,660 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-03-11 00:43:59,660 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-11 00:43:59,662 [ scc.git] DEBUG Check current status 2026-03-11 00:43:59,662 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-11 00:43:59,664 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2026-03-11 00:43:59,665 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-11 00:43:59,705 [ scc.config] DEBUG Found remote.origin.url 2026-03-11 00:44:00,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2026-03-11 00:44:00,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-11 00:44:01,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-11 00:44:01,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-11 00:44:01,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-11 00:44:01,938 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:44:01,977 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:44:01,977 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-03-11 00:44:01,977 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-11 00:44:01,979 [ scc.git] DEBUG Check current status 2026-03-11 00:44:01,979 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-11 00:44:01,982 [ scc.git] DEBUG 160d894 Fix display of code 2026-03-11 00:44:01,982 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-11 00:44:02,021 [ scc.config] DEBUG Found remote.origin.url 2026-03-11 00:44:02,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2026-03-11 00:44:02,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-11 00:44:03,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-11 00:44:03,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-11 00:44:04,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-11 00:44:04,297 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:44:04,336 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:44:04,336 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-03-11 00:44:04,336 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-11 00:44:04,338 [ scc.git] DEBUG Check current status 2026-03-11 00:44:04,338 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-11 00:44:04,341 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-03-11 00:44:04,341 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-11 00:44:04,380 [ scc.config] DEBUG Found remote.origin.url 2026-03-11 00:44:04,380 [ scc.git] DEBUG Repository configuration: base-branch: main 2026-03-11 00:44:04,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2026-03-11 00:44:05,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-11 00:44:05,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-11 00:44:06,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-11 00:44:06,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-11 00:44:06,777 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:44:06,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:44:06,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-03-11 00:44:06,817 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-11 00:44:06,819 [ scc.git] DEBUG Check current status 2026-03-11 00:44:06,819 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-11 00:44:06,822 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2026-03-11 00:44:06,822 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-11 00:44:06,861 [ scc.config] DEBUG Found remote.origin.url 2026-03-11 00:44:07,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-03-11 00:44:07,186 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-03-11 00:44:07,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2026-03-11 00:44:07,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-11 00:44:08,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-11 00:44:08,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-11 00:44:09,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-11 00:44:09,205 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:44:09,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:44:09,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-03-11 00:44:09,244 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-11 00:44:09,247 [ scc.git] DEBUG Check current status 2026-03-11 00:44:09,247 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-11 00:44:09,249 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2026-03-11 00:44:09,249 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-11 00:44:09,288 [ scc.config] DEBUG Found remote.origin.url 2026-03-11 00:44:09,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-03-11 00:44:09,626 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-03-11 00:44:09,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2026-03-11 00:44:10,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-11 00:44:10,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-11 00:44:11,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-11 00:44:11,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-11 00:44:11,667 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:44:11,706 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:44:11,706 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-03-11 00:44:11,706 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-11 00:44:11,708 [ scc.git] DEBUG Check current status 2026-03-11 00:44:11,708 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-11 00:44:11,710 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2026-03-11 00:44:11,710 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-11 00:44:11,751 [ scc.config] DEBUG Found remote.origin.url 2026-03-11 00:44:12,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2026-03-11 00:44:12,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-11 00:44:13,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-11 00:44:13,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-11 00:44:13,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-11 00:44:13,929 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:44:13,968 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:44:13,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-03-11 00:44:13,969 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-11 00:44:13,971 [ scc.git] DEBUG Check current status 2026-03-11 00:44:13,971 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-11 00:44:13,973 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0 2026-03-11 00:44:13,973 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-11 00:44:14,013 [ scc.config] DEBUG Found remote.origin.url 2026-03-11 00:44:14,014 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-03-11 00:44:14,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-03-11 00:44:14,351 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-03-11 00:44:14,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2026-03-11 00:44:15,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-11 00:44:15,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-11 00:44:15,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-11 00:44:16,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-11 00:44:16,376 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:44:16,416 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:44:16,416 [ scc.git] DEBUG Resetting... 2026-03-11 00:44:16,416 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-03-11 00:44:16,423 [ scc.git] DEBUG HEAD is now at 6177d36 merge master -Dorg -Snone 2026-03-11 00:44:16,423 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-03-11 00:44:16,476 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2026-03-11 00:44:16,492 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2026-03-11 00:44:16,526 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-03-11 00:44:16,544 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-03-11 00:44:16,558 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2026-03-11 00:44:16,575 [ scc.git] DEBUG Submodule path 'omero-rois': checked out 'bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9' 2026-03-11 00:44:16,589 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2026-03-11 00:44:16,602 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2026-03-11 00:44:16,613 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2026-03-11 00:44:16,637 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-03-11 00:44:16,640 [ scc.git] DEBUG Check current status 2026-03-11 00:44:16,640 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-11 00:44:16,643 [ scc.git] DEBUG 6177d36 merge master -Dorg -Snone 2026-03-11 00:44:16,643 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-11 00:44:16,685 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-03-11 00:44:16,687 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-03-11 00:44:16,690 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-03-11 00:44:16,693 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-03-11 00:44:16,697 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2026-03-11 00:44:16,699 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-03-11 00:44:16,702 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-03-11 00:44:16,705 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2026-03-11 00:44:16,708 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-03-11 00:44:16,710 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-03-11 00:44:16,713 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-03-11 00:44:16,715 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-03-11 00:44:16,718 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-03-11 00:44:16,721 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-03-11 00:44:16,724 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-03-11 00:44:16,727 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-03-11 00:44:16,729 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-03-11 00:44:16,731 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-03-11 00:44:16,734 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-03-11 00:44:16,736 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-03-11 00:44:16,739 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-03-11 00:44:16,742 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2026-03-11 00:44:16,743 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-03-11 00:44:16,743 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-03-11 00:44:16,743 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-03-11 00:44:16,743 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-03-11 00:44:16,743 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-03-11 00:44:16,743 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-03-11 00:44:16,743 [ scc.repo] DEBUG ## PRs found: 2026-03-11 00:44:17,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-03-11 00:44:17,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-03-11 00:44:17,514 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-11 00:44:18,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2026-03-11 00:44:18,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:44:19,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2026-03-11 00:44:19,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:44:19,602 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-03-11 00:44:20,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-03-11 00:44:20,284 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-11 00:44:20,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2026-03-11 00:44:21,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:44:21,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2026-03-11 00:44:22,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:44:22,171 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-03-11 00:44:22,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-03-11 00:44:22,709 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-11 00:44:23,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2026-03-11 00:44:23,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:44:24,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2026-03-11 00:44:24,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:44:24,706 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-03-11 00:44:24,706 [ scc.repo] DEBUG ## Branches found: 2026-03-11 00:44:24,706 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:44:24,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:44:24,709 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-11 00:44:24,711 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-11 00:44:24,711 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-11 00:44:24,714 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-11 00:44:24,717 [ scc.git] DEBUG Already up to date. 2026-03-11 00:44:24,717 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-03-11 00:44:25,203 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-11 00:44:25,203 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-03-11 00:44:25,208 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-03-11 00:44:25,492 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-11 00:44:25,492 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-03-11 00:44:25,496 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-03-11 00:44:25,852 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-11 00:44:25,852 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-03-11 00:44:25,857 [ scc.git] DEBUG ## Unique users: [] 2026-03-11 00:44:25,857 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:44:25,857 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:44:25,859 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-03-11 00:44:25,862 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:44:25,864 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-03-11 00:44:25,867 [ scc.git] DEBUG Already up to date. 2026-03-11 00:44:26,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:44:26,020 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-03-11 00:44:26,023 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:44:26,025 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-03-11 00:44:26,028 [ scc.git] DEBUG Already up to date. 2026-03-11 00:44:26,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:44:26,425 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-03-11 00:44:26,428 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:44:26,430 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-03-11 00:44:26,432 [ scc.git] DEBUG Already up to date. 2026-03-11 00:44:26,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:44:26,816 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-11 00:44:26,867 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:44:26,867 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:44:26,869 [ scc.repo] DEBUG ## PRs found: 2026-03-11 00:44:27,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2026-03-11 00:44:27,234 [ scc.repo] DEBUG ## Branches found: 2026-03-11 00:44:27,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-03-11 00:44:27,234 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:44:27,234 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:44:27,237 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-11 00:44:27,239 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-11 00:44:27,239 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-11 00:44:27,242 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-11 00:44:27,244 [ scc.git] DEBUG Already up to date. 2026-03-11 00:44:27,244 [ scc.git] DEBUG ## Unique users: [] 2026-03-11 00:44:27,245 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:44:27,245 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:44:27,247 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-11 00:44:27,287 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:44:27,287 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:44:27,289 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:44:27,326 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-11 00:44:27,329 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa8166dd10> has no local changes 2026-03-11 00:44:27,329 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#85 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/)' 2026-03-11 00:44:27,334 [ scc.git] DEBUG [detached HEAD 90c0d4f] merge master -Dorg -Ssuccess-only 2026-03-11 00:44:27,335 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:44:27,335 [ scc.repo] DEBUG ## PRs found: 2026-03-11 00:44:27,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2026-03-11 00:44:28,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2026-03-11 00:44:28,483 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-11 00:44:29,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2026-03-11 00:44:29,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:44:30,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:44:31,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2026-03-11 00:44:31,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:44:31,469 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-11 00:44:32,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2026-03-11 00:44:32,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2026-03-11 00:44:32,732 [ scc.repo] DEBUG ## Branches found: 2026-03-11 00:44:32,733 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-03-11 00:44:32,733 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:44:32,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:44:32,735 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-11 00:44:32,738 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-11 00:44:32,738 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-11 00:44:32,740 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-11 00:44:32,744 [ scc.git] DEBUG Already up to date. 2026-03-11 00:44:32,744 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2026-03-11 00:44:33,278 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2026-03-11 00:44:33,278 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2026-03-11 00:44:33,282 [ scc.git] DEBUG ## Unique users: [] 2026-03-11 00:44:33,282 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:44:33,283 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:44:33,285 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-03-11 00:44:33,288 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:44:33,290 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-03-11 00:44:33,296 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:44:33,298 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-11 00:44:33,298 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-11 00:44:33,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:44:33,444 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-11 00:44:33,483 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:44:33,483 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:44:33,486 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:44:33,524 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-11 00:44:33,527 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa815f4410> has no local changes 2026-03-11 00:44:33,527 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#85 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/)' 2026-03-11 00:44:33,533 [ scc.git] DEBUG [detached HEAD 4906517] merge master -Dorg -Ssuccess-only 2026-03-11 00:44:33,533 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:44:33,533 [ scc.repo] DEBUG ## PRs found: 2026-03-11 00:44:34,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2026-03-11 00:44:34,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2026-03-11 00:44:35,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2026-03-11 00:44:35,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None 2026-03-11 00:44:36,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:44:36,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:44:37,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None 2026-03-11 00:44:37,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:44:37,620 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2026-03-11 00:44:38,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2026-03-11 00:44:38,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2026-03-11 00:44:38,630 [ scc.repo] DEBUG ## Branches found: 2026-03-11 00:44:38,630 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-03-11 00:44:38,630 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:44:38,630 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:44:38,633 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-11 00:44:38,635 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-11 00:44:38,635 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-11 00:44:38,638 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-11 00:44:38,646 [ scc.git] DEBUG Updating ce6e13c..68b7303 2026-03-11 00:44:39,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2026-03-11 00:44:40,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2026-03-11 00:44:40,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2026-03-11 00:44:41,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2026-03-11 00:44:41,661 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2026-03-11 00:44:42,296 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2026-03-11 00:44:42,296 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2026-03-11 00:44:42,301 [ scc.git] DEBUG ## Unique users: [] 2026-03-11 00:44:42,301 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:44:42,301 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:44:42,303 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-03-11 00:44:42,307 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:44:42,309 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-03-11 00:44:42,323 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2026-03-11 00:44:42,324 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:44:42,327 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2026-03-11 00:44:42,327 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2026-03-11 00:44:42,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:44:42,666 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-11 00:44:42,703 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:44:42,703 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:44:42,705 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:44:42,742 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-11 00:44:42,745 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa81606c10> has no local changes 2026-03-11 00:44:42,745 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#85 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/)' 2026-03-11 00:44:42,752 [ scc.git] DEBUG [detached HEAD e16c1e9] merge master -Dorg -Ssuccess-only 2026-03-11 00:44:42,752 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:44:42,752 [ scc.repo] DEBUG ## PRs found: 2026-03-11 00:44:43,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2026-03-11 00:44:43,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/193 HTTP/1.1" 200 None 2026-03-11 00:44:44,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c HTTP/1.1" 200 None 2026-03-11 00:44:44,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:44:45,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:44:45,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c HTTP/1.1" 200 None 2026-03-11 00:44:46,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?per_page=1 HTTP/1.1" 200 None 2026-03-11 00:44:46,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c HTTP/1.1" 200 None 2026-03-11 00:44:47,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/status HTTP/1.1" 200 None 2026-03-11 00:44:47,393 [ scc.repo] DEBUG - PR 193 dominikl 'Only parse import uris if stated' 2026-03-11 00:44:47,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2026-03-11 00:44:48,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2026-03-11 00:44:48,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-03-11 00:44:49,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:44:49,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:44:50,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-03-11 00:44:50,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None 2026-03-11 00:44:51,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-03-11 00:44:51,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None 2026-03-11 00:44:51,817 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-03-11 00:44:52,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2026-03-11 00:44:52,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2026-03-11 00:44:53,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2026-03-11 00:44:53,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2026-03-11 00:44:54,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae HTTP/1.1" 200 None 2026-03-11 00:44:54,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:44:55,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:44:55,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae HTTP/1.1" 200 None 2026-03-11 00:44:56,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f99a6a6869bf6259376adaea157f24955c9aa3ae?per_page=1 HTTP/1.1" 200 None 2026-03-11 00:44:56,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae HTTP/1.1" 200 None 2026-03-11 00:44:57,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/status HTTP/1.1" 200 None 2026-03-11 00:44:57,230 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-03-11 00:44:57,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2026-03-11 00:44:58,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2026-03-11 00:44:59,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-03-11 00:44:59,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:45:00,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:45:00,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-03-11 00:45:01,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2026-03-11 00:45:01,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-03-11 00:45:02,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2026-03-11 00:45:02,169 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2026-03-11 00:45:02,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2026-03-11 00:45:03,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2026-03-11 00:45:03,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2026-03-11 00:45:04,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2026-03-11 00:45:04,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2026-03-11 00:45:05,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2026-03-11 00:45:05,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2026-03-11 00:45:06,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2026-03-11 00:45:06,232 [ scc.repo] DEBUG ## Branches found: 2026-03-11 00:45:06,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-03-11 00:45:06,233 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:45:06,233 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:45:06,235 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-11 00:45:06,237 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-11 00:45:06,237 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-11 00:45:06,241 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-11 00:45:06,255 [ scc.git] DEBUG Updating 11d3587..9f844b8 2026-03-11 00:45:07,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/172 HTTP/1.1" 200 None 2026-03-11 00:45:07,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/192 HTTP/1.1" 200 None 2026-03-11 00:45:08,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/186 HTTP/1.1" 200 None 2026-03-11 00:45:09,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/187 HTTP/1.1" 200 None 2026-03-11 00:45:10,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2026-03-11 00:45:11,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2026-03-11 00:45:11,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2026-03-11 00:45:12,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2026-03-11 00:45:13,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2026-03-11 00:45:14,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2026-03-11 00:45:14,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2026-03-11 00:45:15,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2026-03-11 00:45:15,552 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2026-03-11 00:45:16,410 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-03-11 00:45:16,410 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2026-03-11 00:45:16,414 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2026-03-11 00:45:17,061 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-03-11 00:45:17,061 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2026-03-11 00:45:17,066 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2026-03-11 00:45:17,430 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-03-11 00:45:17,430 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2026-03-11 00:45:17,434 [ scc.git] DEBUG Calling 'git fetch origin pull/193/head' 2026-03-11 00:45:17,710 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-03-11 00:45:17,710 [ scc.git] DEBUG * branch refs/pull/193/head -> FETCH_HEAD 2026-03-11 00:45:17,714 [ scc.git] DEBUG ## Unique users: [] 2026-03-11 00:45:17,714 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:45:17,714 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:45:17,716 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-03-11 00:45:17,720 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:45:17,722 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-03-11 00:45:18,079 [ scc.git] DEBUG Auto-merging README.rst 2026-03-11 00:45:18,079 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-03-11 00:45:18,079 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py 2026-03-11 00:45:18,079 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-03-11 00:45:18,079 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-03-11 00:45:18,079 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2026-03-11 00:45:18,079 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2026-03-11 00:45:18,079 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2026-03-11 00:45:18,079 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py 2026-03-11 00:45:18,079 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-03-11 00:45:18,079 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-03-11 00:45:18,079 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-11 00:45:18,079 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-11 00:45:18,082 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-11 00:45:18,087 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-03-11 00:45:18,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:45:18,241 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-03-11 00:45:18,244 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-11 00:45:18,247 [ scc.git] INFO - PR 174 will-moore 'Skip wells' Conflicting PR. Removed from build [OMERO-plugins-push#85](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/cli.py - src/omero_zarr/masks.py - src/omero_zarr/util.py - src/omero_zarr/raw_pixels.py - test/integration/clitest/test_export.py --conflicts 2026-03-11 00:45:18,249 [ scc.config] DEBUG Found github.token 2026-03-11 00:45:18,249 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts. 2026-03-11 00:45:18,249 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-03-11 00:45:18,253 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:45:18,255 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-03-11 00:45:18,650 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-03-11 00:45:18,650 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-03-11 00:45:18,650 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-03-11 00:45:18,650 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-03-11 00:45:18,651 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-11 00:45:18,651 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-11 00:45:18,654 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-11 00:45:18,658 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-03-11 00:45:18,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:45:18,807 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-03-11 00:45:18,810 [ scc.git] DEBUG Calling 'git diff --name-only 9530c10ba9823fcba6b39139987bf4bcd4a60179..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-11 00:45:18,813 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#85](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/consoleText) for more details. Possible conflicts: - PR #174 will-moore 'Skip wells' - src/omero_zarr/masks.py - test/integration/clitest/test_export.py - Upstream changes - src/omero_zarr/masks.py - test/integration/clitest/test_export.py --conflicts 2026-03-11 00:45:18,815 [ scc.config] DEBUG Found github.token 2026-03-11 00:45:18,815 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2026-03-11 00:45:18,815 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-03-11 00:45:18,818 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:45:18,820 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-03-11 00:45:19,122 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-03-11 00:45:19,122 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-03-11 00:45:19,122 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2026-03-11 00:45:19,122 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_import.py 2026-03-11 00:45:19,122 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_import.py 2026-03-11 00:45:19,123 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-11 00:45:19,123 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-11 00:45:19,125 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-11 00:45:19,129 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-03-11 00:45:19,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:45:19,274 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-03-11 00:45:19,278 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-11 00:45:19,280 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#85](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/zarr_import.py - test/integration/clitest/test_import.py --conflicts 2026-03-11 00:45:19,282 [ scc.config] DEBUG Found github.token 2026-03-11 00:45:19,282 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2026-03-11 00:45:19,282 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-03-11 00:45:19,285 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:45:19,287 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 193 (Only parse import uris if stated) bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-03-11 00:45:19,294 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:45:19,297 [ scc.git] DEBUG src/omero_zarr/cli.py | 8 ++++++++ 2026-03-11 00:45:19,297 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 40 +++++++++++++++++++++------------------- 2026-03-11 00:45:19,297 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 19 deletions(-) 2026-03-11 00:45:19,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:45:19,684 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-11 00:45:19,721 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:45:19,721 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:45:19,723 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:45:19,759 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-11 00:45:19,762 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa816fc710> has no local changes 2026-03-11 00:45:19,762 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#85 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/)' 2026-03-11 00:45:19,768 [ scc.git] DEBUG [detached HEAD 866cbf1] merge master -Dorg -Ssuccess-only 2026-03-11 00:45:19,768 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:45:19,768 [ scc.repo] DEBUG ## PRs found: 2026-03-11 00:45:20,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2026-03-11 00:45:20,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/669 HTTP/1.1" 200 None 2026-03-11 00:45:21,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/666 HTTP/1.1" 200 None 2026-03-11 00:45:21,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/666/comments HTTP/1.1" 200 None 2026-03-11 00:45:22,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/870a04c282c68091e2e59c8bc04247f7419d05e4 HTTP/1.1" 200 None 2026-03-11 00:45:22,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/870a04c282c68091e2e59c8bc04247f7419d05e4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:45:23,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/870a04c282c68091e2e59c8bc04247f7419d05e4 HTTP/1.1" 200 None 2026-03-11 00:45:23,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/870a04c282c68091e2e59c8bc04247f7419d05e4?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:45:23,758 [ scc.repo] DEBUG - PR 666 will-moore 'Standalone app' 2026-03-11 00:45:24,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/663 HTTP/1.1" 200 None 2026-03-11 00:45:24,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/663/comments HTTP/1.1" 200 None 2026-03-11 00:45:25,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2f986f52ea19f9209b6a83450286bc9f5dac72bb HTTP/1.1" 200 None 2026-03-11 00:45:25,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2f986f52ea19f9209b6a83450286bc9f5dac72bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:45:26,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2f986f52ea19f9209b6a83450286bc9f5dac72bb/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:45:27,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2f986f52ea19f9209b6a83450286bc9f5dac72bb HTTP/1.1" 200 None 2026-03-11 00:45:27,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/2f986f52ea19f9209b6a83450286bc9f5dac72bb?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:45:27,552 [ scc.repo] DEBUG - PR 663 will-moore 'Zarr' 2026-03-11 00:45:28,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/662 HTTP/1.1" 200 None 2026-03-11 00:45:28,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/662/comments HTTP/1.1" 200 None 2026-03-11 00:45:29,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cfaed4dabe5ddc7f27de211c1a2630942a55a775 HTTP/1.1" 200 None 2026-03-11 00:45:29,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cfaed4dabe5ddc7f27de211c1a2630942a55a775/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:45:30,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cfaed4dabe5ddc7f27de211c1a2630942a55a775/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:45:30,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cfaed4dabe5ddc7f27de211c1a2630942a55a775 HTTP/1.1" 200 None 2026-03-11 00:45:31,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/cfaed4dabe5ddc7f27de211c1a2630942a55a775?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:45:31,190 [ scc.repo] DEBUG - PR 662 will-moore 'Export script handles OME-zarr images' 2026-03-11 00:45:31,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None 2026-03-11 00:45:32,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652/comments HTTP/1.1" 200 None 2026-03-11 00:45:32,170 [ scc.repo] DEBUG # ... Include label: include 2026-03-11 00:45:32,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None 2026-03-11 00:45:33,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:45:33,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:45:34,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None 2026-03-11 00:45:34,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:45:34,632 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-03-11 00:45:35,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2026-03-11 00:45:35,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2026-03-11 00:45:35,740 [ scc.repo] DEBUG ## Branches found: 2026-03-11 00:45:35,740 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-03-11 00:45:35,740 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:45:35,740 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:45:35,743 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-11 00:45:35,746 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-11 00:45:35,746 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-11 00:45:35,751 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-11 00:45:35,791 [ scc.git] DEBUG Updating 9cc36cde..acada9be 2026-03-11 00:45:36,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/674 HTTP/1.1" 200 None 2026-03-11 00:45:37,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/675 HTTP/1.1" 200 None 2026-03-11 00:45:38,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/671 HTTP/1.1" 200 None 2026-03-11 00:45:38,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/672 HTTP/1.1" 200 None 2026-03-11 00:45:39,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/667 HTTP/1.1" 200 None 2026-03-11 00:45:40,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/665 HTTP/1.1" 200 None 2026-03-11 00:45:40,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/656 HTTP/1.1" 200 None 2026-03-11 00:45:41,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/670 HTTP/1.1" 200 None 2026-03-11 00:45:42,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/664 HTTP/1.1" 200 None 2026-03-11 00:45:43,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/654 HTTP/1.1" 200 None 2026-03-11 00:45:44,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/648 HTTP/1.1" 200 None 2026-03-11 00:45:44,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/661 HTTP/1.1" 200 None 2026-03-11 00:45:45,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None 2026-03-11 00:45:46,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None 2026-03-11 00:45:47,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None 2026-03-11 00:45:48,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None 2026-03-11 00:45:48,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2026-03-11 00:45:49,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2026-03-11 00:45:50,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2026-03-11 00:45:51,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2026-03-11 00:45:51,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2026-03-11 00:45:52,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2026-03-11 00:45:53,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2026-03-11 00:45:54,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2026-03-11 00:45:55,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2026-03-11 00:45:56,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2026-03-11 00:45:56,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2026-03-11 00:45:57,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2026-03-11 00:45:58,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2026-03-11 00:45:58,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2026-03-11 00:45:59,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2026-03-11 00:46:00,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2026-03-11 00:46:00,442 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head' 2026-03-11 00:46:00,971 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-03-11 00:46:00,971 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD 2026-03-11 00:46:00,976 [ scc.git] DEBUG Calling 'git fetch origin pull/662/head' 2026-03-11 00:46:02,460 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-03-11 00:46:02,460 [ scc.git] DEBUG * branch refs/pull/662/head -> FETCH_HEAD 2026-03-11 00:46:02,464 [ scc.git] DEBUG Calling 'git fetch origin pull/663/head' 2026-03-11 00:46:02,868 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-03-11 00:46:02,869 [ scc.git] DEBUG * branch refs/pull/663/head -> FETCH_HEAD 2026-03-11 00:46:02,873 [ scc.git] DEBUG Calling 'git fetch origin pull/666/head' 2026-03-11 00:46:03,276 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-03-11 00:46:03,276 [ scc.git] DEBUG * branch refs/pull/666/head -> FETCH_HEAD 2026-03-11 00:46:03,281 [ scc.git] DEBUG ## Unique users: [] 2026-03-11 00:46:03,281 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:46:03,281 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:46:03,283 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-03-11 00:46:03,292 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:46:03,294 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-03-11 00:46:03,335 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-03-11 00:46:03,335 [ scc.git] DEBUG Auto-merging src/index.html 2026-03-11 00:46:03,335 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-03-11 00:46:03,335 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:46:03,341 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++- 2026-03-11 00:46:03,341 [ scc.git] DEBUG src/index.html | 11 ++ 2026-03-11 00:46:03,341 [ scc.git] DEBUG src/js/views/figure_view.js | 1 + 2026-03-11 00:46:03,341 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-) 2026-03-11 00:46:03,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:46:03,495 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cfaed4dabe5ddc7f27de211c1a2630942a55a775' 2026-03-11 00:46:03,502 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:46:03,504 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 662 (Export script handles OME-zarr images) cfaed4dabe5ddc7f27de211c1a2630942a55a775' 2026-03-11 00:46:03,522 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-03-11 00:46:03,523 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:46:03,527 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 435 +++++++++++++++------ 2026-03-11 00:46:03,527 [ scc.git] DEBUG 1 file changed, 319 insertions(+), 116 deletions(-) 2026-03-11 00:46:03,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:46:03,882 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2f986f52ea19f9209b6a83450286bc9f5dac72bb' 2026-03-11 00:46:03,889 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:46:03,891 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 663 (Zarr) 2f986f52ea19f9209b6a83450286bc9f5dac72bb' 2026-03-11 00:46:04,096 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-11 00:46:04,097 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-03-11 00:46:04,097 [ scc.git] DEBUG Auto-merging package.json 2026-03-11 00:46:04,097 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package.json 2026-03-11 00:46:04,097 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-11 00:46:04,097 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-11 00:46:04,102 [ scc.git] DEBUG Calling 'git reset --hard 254555659aad0ef5be1598f1ccc0e1aac4bb40e0' 2026-03-11 00:46:04,111 [ scc.git] DEBUG HEAD is now at 25455565 merge master -Dorg -Ssuccess-only: PR 662 (Export script handles OME-zarr images) 2026-03-11 00:46:04,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:46:04,288 [ scc.git] DEBUG Calling 'git merge-base acada9be0cc8759f88dbfd89e8f1f7d69955749c 2f986f52ea19f9209b6a83450286bc9f5dac72bb' 2026-03-11 00:46:04,292 [ scc.git] DEBUG Calling 'git diff --name-only 186921eab53e6bdfe6df0720213e1c3759898cf9..acada9be0cc8759f88dbfd89e8f1f7d69955749c' 2026-03-11 00:46:04,295 [ scc.git] INFO - PR 663 will-moore 'Zarr' Conflicting PR. Removed from build [OMERO-plugins-push#85](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/consoleText) for more details. Possible conflicts: - Upstream changes - package.json - package-lock.json --conflicts 2026-03-11 00:46:04,297 [ scc.config] DEBUG Found github.token 2026-03-11 00:46:04,297 [ scc.git] DEBUG Not adding comment to issue #663, already --conflicts. 2026-03-11 00:46:04,297 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...870a04c282c68091e2e59c8bc04247f7419d05e4' 2026-03-11 00:46:04,303 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:46:04,306 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 666 (Standalone app) 870a04c282c68091e2e59c8bc04247f7419d05e4' 2026-03-11 00:46:04,947 [ scc.git] DEBUG Auto-merging omero_figure/views.py 2026-03-11 00:46:04,947 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-11 00:46:04,947 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-03-11 00:46:04,947 [ scc.git] DEBUG Auto-merging package.json 2026-03-11 00:46:04,947 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package.json 2026-03-11 00:46:04,947 [ scc.git] DEBUG Auto-merging src/css/figure.css 2026-03-11 00:46:04,947 [ scc.git] DEBUG Auto-merging src/index.html 2026-03-11 00:46:04,947 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2026-03-11 00:46:04,947 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/models/figure_model.js 2026-03-11 00:46:04,947 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2026-03-11 00:46:04,947 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/models/panel_model.js 2026-03-11 00:46:04,947 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-03-11 00:46:04,947 [ scc.git] DEBUG Auto-merging src/js/views/modal_views.js 2026-03-11 00:46:04,947 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2026-03-11 00:46:04,947 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2026-03-11 00:46:04,947 [ scc.git] DEBUG Auto-merging src/js/views/util.js 2026-03-11 00:46:04,947 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/util.js 2026-03-11 00:46:04,947 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-11 00:46:04,947 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-11 00:46:04,952 [ scc.git] DEBUG Calling 'git reset --hard 254555659aad0ef5be1598f1ccc0e1aac4bb40e0' 2026-03-11 00:46:04,963 [ scc.git] DEBUG HEAD is now at 25455565 merge master -Dorg -Ssuccess-only: PR 662 (Export script handles OME-zarr images) 2026-03-11 00:46:05,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:46:05,113 [ scc.git] DEBUG Calling 'git merge-base acada9be0cc8759f88dbfd89e8f1f7d69955749c 870a04c282c68091e2e59c8bc04247f7419d05e4' 2026-03-11 00:46:05,120 [ scc.git] DEBUG Calling 'git diff --name-only b79d638b95385463319f73afc484cf4a1ee3ba13..acada9be0cc8759f88dbfd89e8f1f7d69955749c' 2026-03-11 00:46:05,123 [ scc.git] INFO - PR 666 will-moore 'Standalone app' Conflicting PR. Removed from build [OMERO-plugins-push#85](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/consoleText) for more details. Possible conflicts: - PR #663 will-moore 'Zarr' - package.json - src/js/models/panel_model.js - src/js/views/util.js - src/js/models/figure_model.js - package-lock.json - Upstream changes - package.json - src/js/models/panel_model.js - src/js/views/util.js - src/js/models/figure_model.js - package-lock.json --conflicts 2026-03-11 00:46:05,125 [ scc.config] DEBUG Found github.token 2026-03-11 00:46:05,125 [ scc.git] DEBUG Not adding comment to issue #666, already --conflicts. 2026-03-11 00:46:05,126 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-11 00:46:05,163 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:46:05,163 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:46:05,165 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:46:05,200 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-11 00:46:05,207 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa816ab750> has no local changes 2026-03-11 00:46:05,207 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 669 will-moore 'Standalone python script' (stage: draft) - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) Updating 9cc36cde..acada9be Previously merged: - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 662 will-moore 'Export script handles OME-zarr images' Conflicting PRs (not included): - PR 663 will-moore 'Zarr' - PR 666 will-moore 'Standalone app' Generated by OMERO-plugins-push#85 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/)' 2026-03-11 00:46:05,214 [ scc.git] DEBUG [detached HEAD f123318e] merge master -Dorg -Ssuccess-only 2026-03-11 00:46:05,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:46:05,215 [ scc.repo] DEBUG ## PRs found: 2026-03-11 00:46:05,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2026-03-11 00:46:06,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2026-03-11 00:46:06,170 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-11 00:46:06,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2026-03-11 00:46:07,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:46:07,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:46:08,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2026-03-11 00:46:08,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:46:08,831 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-11 00:46:09,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2026-03-11 00:46:09,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2026-03-11 00:46:10,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2026-03-11 00:46:10,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:46:11,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2026-03-11 00:46:11,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:46:11,853 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2026-03-11 00:46:11,854 [ scc.repo] DEBUG ## Branches found: 2026-03-11 00:46:11,854 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-03-11 00:46:11,854 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:46:11,854 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:46:11,856 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-11 00:46:11,859 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-11 00:46:11,859 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-11 00:46:11,861 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-11 00:46:11,865 [ scc.git] DEBUG Already up to date. 2026-03-11 00:46:11,865 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2026-03-11 00:46:12,189 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-03-11 00:46:12,189 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2026-03-11 00:46:12,193 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2026-03-11 00:46:12,455 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-03-11 00:46:12,455 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2026-03-11 00:46:12,459 [ scc.git] DEBUG ## Unique users: [] 2026-03-11 00:46:12,459 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:46:12,459 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:46:12,462 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-03-11 00:46:12,465 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:46:12,467 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-03-11 00:46:12,558 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2026-03-11 00:46:12,559 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:46:12,562 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2026-03-11 00:46:12,562 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2026-03-11 00:46:12,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:46:12,698 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-03-11 00:46:12,700 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:46:12,703 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-03-11 00:46:12,709 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:46:12,712 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-11 00:46:12,712 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-11 00:46:13,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:46:13,106 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-11 00:46:13,142 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:46:13,142 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:46:13,145 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:46:13,182 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-11 00:46:13,185 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa816209d0> has no local changes 2026-03-11 00:46:13,185 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#85 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/)' 2026-03-11 00:46:13,190 [ scc.git] DEBUG [detached HEAD 90fab60] merge master -Dorg -Ssuccess-only 2026-03-11 00:46:13,191 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:46:13,191 [ scc.repo] DEBUG ## PRs found: 2026-03-11 00:46:13,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2026-03-11 00:46:14,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2026-03-11 00:46:14,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2026-03-11 00:46:15,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2026-03-11 00:46:15,314 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-11 00:46:15,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2026-03-11 00:46:16,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:46:16,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:46:17,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2026-03-11 00:46:17,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:46:17,956 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-03-11 00:46:18,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2026-03-11 00:46:18,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2026-03-11 00:46:19,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2026-03-11 00:46:19,454 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-11 00:46:20,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2026-03-11 00:46:20,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:46:21,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2026-03-11 00:46:21,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:46:21,505 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-03-11 00:46:21,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2026-03-11 00:46:21,993 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-11 00:46:22,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2026-03-11 00:46:23,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:46:23,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2026-03-11 00:46:24,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:46:24,060 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-03-11 00:46:24,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2026-03-11 00:46:24,544 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-11 00:46:25,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2026-03-11 00:46:25,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:46:26,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2026-03-11 00:46:26,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:46:26,604 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-03-11 00:46:27,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2026-03-11 00:46:27,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2026-03-11 00:46:27,594 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-11 00:46:28,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2026-03-11 00:46:28,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:46:29,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2026-03-11 00:46:29,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:46:29,590 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-03-11 00:46:30,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2026-03-11 00:46:30,074 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-11 00:46:30,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2026-03-11 00:46:31,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:46:31,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2026-03-11 00:46:32,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:46:32,439 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-03-11 00:46:32,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2026-03-11 00:46:32,921 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-11 00:46:33,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2026-03-11 00:46:34,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:46:34,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2026-03-11 00:46:35,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:46:35,061 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-03-11 00:46:35,061 [ scc.repo] DEBUG ## Branches found: 2026-03-11 00:46:35,061 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-03-11 00:46:35,062 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:46:35,062 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:46:35,064 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-11 00:46:35,067 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-11 00:46:35,067 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-11 00:46:35,069 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-11 00:46:35,072 [ scc.git] DEBUG Already up to date. 2026-03-11 00:46:35,072 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2026-03-11 00:46:35,515 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-11 00:46:35,515 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2026-03-11 00:46:35,518 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2026-03-11 00:46:35,888 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-11 00:46:35,888 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2026-03-11 00:46:35,892 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2026-03-11 00:46:36,266 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-11 00:46:36,266 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2026-03-11 00:46:36,270 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2026-03-11 00:46:36,634 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-11 00:46:36,635 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2026-03-11 00:46:36,639 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2026-03-11 00:46:37,017 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-11 00:46:37,017 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2026-03-11 00:46:37,022 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2026-03-11 00:46:37,486 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-11 00:46:37,486 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2026-03-11 00:46:37,490 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2026-03-11 00:46:37,847 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-11 00:46:37,847 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2026-03-11 00:46:37,851 [ scc.git] DEBUG ## Unique users: [] 2026-03-11 00:46:37,851 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:46:37,851 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:46:37,853 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-03-11 00:46:37,855 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:46:37,858 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-03-11 00:46:37,865 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:46:37,870 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-03-11 00:46:37,870 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-03-11 00:46:38,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:46:38,026 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-03-11 00:46:38,029 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:46:38,031 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-03-11 00:46:38,045 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-11 00:46:38,046 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:46:38,050 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2026-03-11 00:46:38,050 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2026-03-11 00:46:38,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:46:38,435 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-03-11 00:46:38,437 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:46:38,439 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-03-11 00:46:38,492 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-11 00:46:38,492 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-03-11 00:46:38,492 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-11 00:46:38,493 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-11 00:46:38,495 [ scc.git] DEBUG Calling 'git reset --hard 5489a6fb18c09dea8a916d5dd666d051fb6dfa94' 2026-03-11 00:46:38,499 [ scc.git] DEBUG HEAD is now at 5489a6f merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2026-03-11 00:46:38,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:46:38,845 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-03-11 00:46:38,847 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-03-11 00:46:38,850 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#85](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2026-03-11 00:46:38,852 [ scc.config] DEBUG Found github.token 2026-03-11 00:46:38,852 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2026-03-11 00:46:38,852 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-03-11 00:46:38,854 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:46:38,857 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-03-11 00:46:38,886 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-11 00:46:38,887 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:46:38,891 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2026-03-11 00:46:38,891 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2026-03-11 00:46:39,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:46:39,256 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-03-11 00:46:39,259 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:46:39,261 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-03-11 00:46:39,276 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-11 00:46:39,276 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:46:39,281 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-03-11 00:46:39,281 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-03-11 00:46:39,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:46:39,654 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-03-11 00:46:39,657 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:46:39,659 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-03-11 00:46:39,722 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-11 00:46:39,722 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-03-11 00:46:39,722 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-11 00:46:39,722 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-11 00:46:39,725 [ scc.git] DEBUG Calling 'git reset --hard 8d0d64b0b528d6c39c4b20d276de1096f791730d' 2026-03-11 00:46:39,729 [ scc.git] DEBUG HEAD is now at 8d0d64b merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-03-11 00:46:40,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:46:40,063 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-03-11 00:46:40,066 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-03-11 00:46:40,068 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#85](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2026-03-11 00:46:40,070 [ scc.config] DEBUG Found github.token 2026-03-11 00:46:40,070 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2026-03-11 00:46:40,070 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-03-11 00:46:40,073 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:46:40,075 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-03-11 00:46:40,093 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-11 00:46:40,093 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-03-11 00:46:40,093 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-11 00:46:40,093 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-11 00:46:40,096 [ scc.git] DEBUG Calling 'git reset --hard 8d0d64b0b528d6c39c4b20d276de1096f791730d' 2026-03-11 00:46:40,100 [ scc.git] DEBUG HEAD is now at 8d0d64b merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-03-11 00:46:40,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:46:40,457 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-03-11 00:46:40,459 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-03-11 00:46:40,462 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#85](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2026-03-11 00:46:40,464 [ scc.config] DEBUG Found github.token 2026-03-11 00:46:40,464 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2026-03-11 00:46:40,464 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-11 00:46:40,500 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:46:40,500 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:46:40,502 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:46:40,537 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-11 00:46:40,541 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa804f75d0> has no local changes 2026-03-11 00:46:40,541 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#85 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/)' 2026-03-11 00:46:40,548 [ scc.git] DEBUG [detached HEAD 3616a6f] merge master -Dorg -Ssuccess-only 2026-03-11 00:46:40,548 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:46:40,548 [ scc.repo] DEBUG ## PRs found: 2026-03-11 00:46:41,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2026-03-11 00:46:41,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/514 HTTP/1.1" 200 None 2026-03-11 00:46:42,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f29e3950325423129b309fdefc7851ee0dd46e26 HTTP/1.1" 200 None 2026-03-11 00:46:42,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f29e3950325423129b309fdefc7851ee0dd46e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:46:43,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f29e3950325423129b309fdefc7851ee0dd46e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:46:44,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f29e3950325423129b309fdefc7851ee0dd46e26 HTTP/1.1" 200 None 2026-03-11 00:46:44,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/f29e3950325423129b309fdefc7851ee0dd46e26?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:46:44,621 [ scc.repo] DEBUG - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' 2026-03-11 00:46:45,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/513 HTTP/1.1" 200 None 2026-03-11 00:46:45,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None 2026-03-11 00:46:46,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:46:46,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:46:47,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None 2026-03-11 00:46:47,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/aebb6273b9267a47a47363208fa97dc9c638a688?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:46:47,600 [ scc.repo] DEBUG - PR 513 jburel 'Bump Python version' 2026-03-11 00:46:48,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/512 HTTP/1.1" 200 None 2026-03-11 00:46:48,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None 2026-03-11 00:46:49,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:46:49,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:46:50,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None 2026-03-11 00:46:50,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/ec8f9e716c574a715529da53dff61ef178020c43?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:46:50,612 [ scc.repo] DEBUG - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-03-11 00:46:51,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511 HTTP/1.1" 200 None 2026-03-11 00:46:51,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None 2026-03-11 00:46:52,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2026-03-11 00:46:52,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2026-03-11 00:46:53,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2026-03-11 00:46:53,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2026-03-11 00:46:53,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2026-03-11 00:46:54,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2026-03-11 00:46:54,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2026-03-11 00:46:55,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:46:55,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2026-03-11 00:46:56,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:46:56,320 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2026-03-11 00:46:56,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2026-03-11 00:46:57,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2026-03-11 00:46:57,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2026-03-11 00:46:58,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:46:58,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2026-03-11 00:46:59,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:46:59,326 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2026-03-11 00:46:59,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2026-03-11 00:47:00,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2026-03-11 00:47:00,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2026-03-11 00:47:01,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:47:01,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2026-03-11 00:47:02,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:47:02,211 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2026-03-11 00:47:02,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2026-03-11 00:47:03,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2026-03-11 00:47:03,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None 2026-03-11 00:47:04,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:47:04,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:47:04,675 [ scc.repo] DEBUG ## Branches found: 2026-03-11 00:47:04,675 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-03-11 00:47:04,675 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:47:04,675 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:04,678 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-11 00:47:04,680 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-11 00:47:04,680 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-11 00:47:04,683 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-11 00:47:04,690 [ scc.git] DEBUG Updating 7a798ce..5e2de43 2026-03-11 00:47:05,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2026-03-11 00:47:06,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2026-03-11 00:47:06,182 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2026-03-11 00:47:06,544 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-11 00:47:06,545 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2026-03-11 00:47:06,549 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2026-03-11 00:47:07,084 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-11 00:47:07,084 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2026-03-11 00:47:07,088 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2026-03-11 00:47:07,506 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-11 00:47:07,506 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2026-03-11 00:47:07,510 [ scc.git] DEBUG Calling 'git fetch origin pull/512/head' 2026-03-11 00:47:07,772 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-11 00:47:07,772 [ scc.git] DEBUG * branch refs/pull/512/head -> FETCH_HEAD 2026-03-11 00:47:07,776 [ scc.git] DEBUG Calling 'git fetch origin pull/513/head' 2026-03-11 00:47:08,124 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-11 00:47:08,124 [ scc.git] DEBUG * branch refs/pull/513/head -> FETCH_HEAD 2026-03-11 00:47:08,128 [ scc.git] DEBUG Calling 'git fetch origin pull/514/head' 2026-03-11 00:47:08,493 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-11 00:47:08,493 [ scc.git] DEBUG * branch refs/pull/514/head -> FETCH_HEAD 2026-03-11 00:47:08,499 [ scc.git] DEBUG ## Unique users: [] 2026-03-11 00:47:08,499 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:47:08,499 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:08,502 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-03-11 00:47:08,506 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:08,509 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-03-11 00:47:08,536 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2026-03-11 00:47:08,536 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2026-03-11 00:47:08,537 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:47:08,541 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2026-03-11 00:47:08,542 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2026-03-11 00:47:08,542 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2026-03-11 00:47:08,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:47:08,720 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2026-03-11 00:47:08,724 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:08,727 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2026-03-11 00:47:08,745 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2026-03-11 00:47:08,745 [ scc.git] DEBUG Auto-merging src/app/context.js 2026-03-11 00:47:08,745 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2026-03-11 00:47:08,746 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2026-03-11 00:47:08,746 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:47:08,750 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2026-03-11 00:47:08,751 [ scc.git] DEBUG src/app/context.js | 6 +- 2026-03-11 00:47:08,751 [ scc.git] DEBUG src/app/header.html | 5 + 2026-03-11 00:47:08,751 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2026-03-11 00:47:08,751 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2026-03-11 00:47:08,751 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2026-03-11 00:47:08,751 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2026-03-11 00:47:08,751 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2026-03-11 00:47:09,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:47:09,114 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2026-03-11 00:47:09,119 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:09,121 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2026-03-11 00:47:09,132 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2026-03-11 00:47:09,133 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:47:09,136 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2026-03-11 00:47:09,136 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2026-03-11 00:47:09,136 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2026-03-11 00:47:09,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:47:09,515 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ec8f9e716c574a715529da53dff61ef178020c43' 2026-03-11 00:47:09,520 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:09,522 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 512 (Replace manual changelog by automated GH release step) ec8f9e716c574a715529da53dff61ef178020c43' 2026-03-11 00:47:09,533 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:47:09,536 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 5 + 2026-03-11 00:47:09,536 [ scc.git] DEBUG CHANGELOG.md | 261 ------------------------------------- 2026-03-11 00:47:09,536 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 261 deletions(-) 2026-03-11 00:47:09,536 [ scc.git] DEBUG delete mode 100644 CHANGELOG.md 2026-03-11 00:47:09,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:47:09,919 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aebb6273b9267a47a47363208fa97dc9c638a688' 2026-03-11 00:47:09,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:09,925 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 513 (Bump Python version) aebb6273b9267a47a47363208fa97dc9c638a688' 2026-03-11 00:47:09,935 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-03-11 00:47:09,936 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:47:09,938 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 4 ++-- 2026-03-11 00:47:09,938 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2026-03-11 00:47:10,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:47:10,328 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f29e3950325423129b309fdefc7851ee0dd46e26' 2026-03-11 00:47:10,332 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:10,334 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 514 (Fix where interpolate_pixels server config is read from) f29e3950325423129b309fdefc7851ee0dd46e26' 2026-03-11 00:47:10,345 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2026-03-11 00:47:10,346 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:47:10,349 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 3 ++- 2026-03-11 00:47:10,349 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 1 deletion(-) 2026-03-11 00:47:10,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:47:10,734 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-11 00:47:10,773 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:47:10,773 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:10,775 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:47:10,811 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-11 00:47:10,815 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa816baad0> has no local changes 2026-03-11 00:47:10,815 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..5e2de43 Previously merged: - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 513 jburel 'Bump Python version' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' Generated by OMERO-plugins-push#85 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/)' 2026-03-11 00:47:10,822 [ scc.git] DEBUG [detached HEAD ad3aa23] merge master -Dorg -Ssuccess-only 2026-03-11 00:47:10,822 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:47:10,822 [ scc.repo] DEBUG ## PRs found: 2026-03-11 00:47:11,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2026-03-11 00:47:11,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2026-03-11 00:47:12,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2026-03-11 00:47:12,251 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-11 00:47:12,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2026-03-11 00:47:13,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:47:13,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:47:14,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2026-03-11 00:47:14,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:47:14,719 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-11 00:47:15,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2026-03-11 00:47:15,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2026-03-11 00:47:16,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:47:16,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2026-03-11 00:47:17,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:47:17,142 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-11 00:47:17,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2026-03-11 00:47:18,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2026-03-11 00:47:18,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2026-03-11 00:47:19,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:47:19,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2026-03-11 00:47:19,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:47:19,998 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2026-03-11 00:47:19,998 [ scc.repo] DEBUG ## Branches found: 2026-03-11 00:47:19,998 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-03-11 00:47:19,998 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:47:19,998 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:20,000 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-11 00:47:20,003 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-11 00:47:20,003 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-11 00:47:20,006 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-11 00:47:20,009 [ scc.git] DEBUG Already up to date. 2026-03-11 00:47:20,009 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-03-11 00:47:20,287 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-03-11 00:47:20,287 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-03-11 00:47:20,291 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2026-03-11 00:47:20,686 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-03-11 00:47:20,686 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2026-03-11 00:47:20,689 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2026-03-11 00:47:20,949 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-03-11 00:47:20,949 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2026-03-11 00:47:20,953 [ scc.git] DEBUG ## Unique users: [] 2026-03-11 00:47:20,953 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:47:20,953 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:20,956 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-03-11 00:47:20,959 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:20,961 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-03-11 00:47:20,969 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:47:20,972 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2026-03-11 00:47:20,972 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2026-03-11 00:47:20,972 [ scc.git] DEBUG requirements.txt | 2 +- 2026-03-11 00:47:20,972 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2026-03-11 00:47:20,972 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2026-03-11 00:47:20,972 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2026-03-11 00:47:21,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:47:21,168 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-03-11 00:47:21,171 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:21,173 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-03-11 00:47:21,180 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:47:21,183 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-11 00:47:21,183 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-11 00:47:21,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:47:21,559 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-03-11 00:47:21,562 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:21,564 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-03-11 00:47:21,587 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-03-11 00:47:21,587 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-03-11 00:47:21,587 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-11 00:47:21,588 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-11 00:47:21,590 [ scc.git] DEBUG Calling 'git reset --hard ca7740afba9c0d6f2432c8bd420bb4165f20b7ea' 2026-03-11 00:47:21,594 [ scc.git] DEBUG HEAD is now at ca7740a merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2026-03-11 00:47:21,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:47:21,951 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-03-11 00:47:21,953 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2026-03-11 00:47:21,956 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#85](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2026-03-11 00:47:21,958 [ scc.config] DEBUG Found github.token 2026-03-11 00:47:21,958 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2026-03-11 00:47:21,958 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-11 00:47:21,995 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:47:21,995 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:21,997 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:47:22,033 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-11 00:47:22,036 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa804feb90> has no local changes 2026-03-11 00:47:22,036 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#85 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/)' 2026-03-11 00:47:22,042 [ scc.git] DEBUG [detached HEAD 5d9dea3] merge master -Dorg -Ssuccess-only 2026-03-11 00:47:22,042 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:47:22,043 [ scc.repo] DEBUG ## PRs found: 2026-03-11 00:47:22,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2026-03-11 00:47:23,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None 2026-03-11 00:47:23,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None 2026-03-11 00:47:23,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f HTTP/1.1" 200 None 2026-03-11 00:47:24,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:47:24,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f HTTP/1.1" 200 None 2026-03-11 00:47:25,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:47:25,354 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-03-11 00:47:25,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2026-03-11 00:47:26,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2026-03-11 00:47:26,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2026-03-11 00:47:27,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:47:27,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2026-03-11 00:47:28,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:47:28,341 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-03-11 00:47:28,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2026-03-11 00:47:29,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2026-03-11 00:47:29,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2026-03-11 00:47:30,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:47:30,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2026-03-11 00:47:31,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:47:31,150 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-03-11 00:47:31,150 [ scc.repo] DEBUG ## Branches found: 2026-03-11 00:47:31,150 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-03-11 00:47:31,150 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:47:31,150 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:31,153 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-11 00:47:31,155 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-11 00:47:31,155 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-11 00:47:31,158 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-11 00:47:31,164 [ scc.git] DEBUG Updating 3cd120c..55060a2 2026-03-11 00:47:31,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2026-03-11 00:47:31,839 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2026-03-11 00:47:32,290 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-03-11 00:47:32,290 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2026-03-11 00:47:32,295 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2026-03-11 00:47:32,765 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-03-11 00:47:32,765 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2026-03-11 00:47:32,768 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head' 2026-03-11 00:47:33,113 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-03-11 00:47:33,113 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD 2026-03-11 00:47:33,117 [ scc.git] DEBUG ## Unique users: [] 2026-03-11 00:47:33,117 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:47:33,117 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:33,120 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-03-11 00:47:33,123 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:33,126 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-03-11 00:47:33,139 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2026-03-11 00:47:33,139 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2026-03-11 00:47:33,139 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-03-11 00:47:33,139 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-03-11 00:47:33,139 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-11 00:47:33,139 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-11 00:47:33,142 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-03-11 00:47:33,145 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-03-11 00:47:33,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:47:33,314 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-03-11 00:47:33,317 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2026-03-11 00:47:33,320 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#85](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2026-03-11 00:47:33,322 [ scc.config] DEBUG Found github.token 2026-03-11 00:47:33,322 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2026-03-11 00:47:33,322 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2026-03-11 00:47:33,326 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:33,328 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2026-03-11 00:47:33,343 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-03-11 00:47:33,343 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-03-11 00:47:33,343 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2026-03-11 00:47:33,343 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-11 00:47:33,343 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-11 00:47:33,346 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-03-11 00:47:33,351 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-03-11 00:47:33,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:47:33,713 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2026-03-11 00:47:33,717 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2026-03-11 00:47:33,719 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#85](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2026-03-11 00:47:33,721 [ scc.config] DEBUG Found github.token 2026-03-11 00:47:33,721 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2026-03-11 00:47:33,721 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-03-11 00:47:33,724 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:33,726 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-03-11 00:47:33,734 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:47:33,737 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++- 2026-03-11 00:47:33,737 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-) 2026-03-11 00:47:34,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:47:34,122 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-11 00:47:34,159 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:47:34,159 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:34,161 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:47:34,197 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-11 00:47:34,200 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa81622910> has no local changes 2026-03-11 00:47:34,201 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#85 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/)' 2026-03-11 00:47:34,206 [ scc.git] DEBUG [detached HEAD af51aae] merge master -Dorg -Ssuccess-only 2026-03-11 00:47:34,206 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:47:34,207 [ scc.repo] DEBUG ## PRs found: 2026-03-11 00:47:34,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2026-03-11 00:47:35,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2026-03-11 00:47:35,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2026-03-11 00:47:36,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:47:36,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:47:37,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2026-03-11 00:47:37,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:47:37,813 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-11 00:47:38,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2026-03-11 00:47:38,341 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-11 00:47:38,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2026-03-11 00:47:39,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:47:39,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:47:40,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2026-03-11 00:47:40,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:47:40,841 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-03-11 00:47:41,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2026-03-11 00:47:41,443 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-11 00:47:42,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2026-03-11 00:47:42,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:47:43,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:47:43,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2026-03-11 00:47:43,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:47:43,925 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-03-11 00:47:44,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2026-03-11 00:47:44,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2026-03-11 00:47:45,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2026-03-11 00:47:46,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2026-03-11 00:47:46,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2026-03-11 00:47:46,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2026-03-11 00:47:47,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2026-03-11 00:47:47,466 [ scc.repo] DEBUG ## Branches found: 2026-03-11 00:47:47,466 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-03-11 00:47:47,466 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:47:47,466 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:47,469 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-11 00:47:47,471 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-11 00:47:47,471 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-11 00:47:47,473 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-11 00:47:47,477 [ scc.git] DEBUG Already up to date. 2026-03-11 00:47:47,477 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2026-03-11 00:47:47,757 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-03-11 00:47:47,757 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2026-03-11 00:47:47,760 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2026-03-11 00:47:48,146 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-03-11 00:47:48,146 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2026-03-11 00:47:48,151 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2026-03-11 00:47:48,415 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-03-11 00:47:48,415 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2026-03-11 00:47:48,419 [ scc.git] DEBUG ## Unique users: [] 2026-03-11 00:47:48,419 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:47:48,419 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:48,421 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2026-03-11 00:47:48,424 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:48,426 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2026-03-11 00:47:48,433 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:47:48,436 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2026-03-11 00:47:48,436 [ scc.git] DEBUG package.json | 2 +- 2026-03-11 00:47:48,436 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2026-03-11 00:47:48,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:47:48,578 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2026-03-11 00:47:48,581 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:48,583 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2026-03-11 00:47:48,592 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-11 00:47:48,592 [ scc.git] DEBUG Auto-merging package.json 2026-03-11 00:47:48,593 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:47:48,596 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2026-03-11 00:47:48,596 [ scc.git] DEBUG package.json | 2 +- 2026-03-11 00:47:48,596 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-03-11 00:47:48,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:47:48,981 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-03-11 00:47:48,984 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:48,986 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-03-11 00:47:48,994 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:47:48,997 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-11 00:47:48,997 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-11 00:47:49,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:47:49,390 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-11 00:47:49,427 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:47:49,427 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:49,429 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:47:49,464 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-11 00:47:49,468 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa816af050> has no local changes 2026-03-11 00:47:49,468 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#85 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/)' 2026-03-11 00:47:49,474 [ scc.git] DEBUG [detached HEAD 6e15f7a] merge master -Dorg -Ssuccess-only 2026-03-11 00:47:49,474 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:47:49,474 [ scc.repo] DEBUG ## PRs found: 2026-03-11 00:47:49,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2026-03-11 00:47:50,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2026-03-11 00:47:50,391 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-11 00:47:50,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2026-03-11 00:47:51,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:47:52,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:47:52,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2026-03-11 00:47:52,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:47:52,948 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-11 00:47:52,948 [ scc.repo] DEBUG ## Branches found: 2026-03-11 00:47:52,948 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-03-11 00:47:52,948 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:47:52,948 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:52,951 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-11 00:47:52,953 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-11 00:47:52,953 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-11 00:47:52,956 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-11 00:47:52,959 [ scc.git] DEBUG Already up to date. 2026-03-11 00:47:52,959 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2026-03-11 00:47:53,241 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2026-03-11 00:47:53,241 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2026-03-11 00:47:53,245 [ scc.git] DEBUG ## Unique users: [] 2026-03-11 00:47:53,245 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:47:53,245 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:53,247 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2026-03-11 00:47:53,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:53,252 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2026-03-11 00:47:53,258 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:47:53,261 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-11 00:47:53,261 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-11 00:47:53,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:47:53,407 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-11 00:47:53,444 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:47:53,444 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:53,446 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:47:53,481 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-11 00:47:53,484 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa804f9f10> has no local changes 2026-03-11 00:47:53,485 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#85 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/)' 2026-03-11 00:47:53,490 [ scc.git] DEBUG [detached HEAD 2ee5469] merge master -Dorg -Ssuccess-only 2026-03-11 00:47:53,490 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:47:53,490 [ scc.repo] DEBUG ## PRs found: 2026-03-11 00:47:53,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2026-03-11 00:47:54,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None 2026-03-11 00:47:54,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34/comments HTTP/1.1" 200 None 2026-03-11 00:47:54,924 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-11 00:47:55,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-03-11 00:47:56,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:47:56,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:47:57,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-03-11 00:47:57,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None 2026-03-11 00:47:58,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-03-11 00:47:58,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None 2026-03-11 00:47:58,472 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-11 00:47:58,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2026-03-11 00:47:58,931 [ scc.repo] DEBUG ## Branches found: 2026-03-11 00:47:58,931 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-03-11 00:47:58,931 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:47:58,931 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:47:58,934 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-11 00:47:58,936 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-11 00:47:58,936 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-11 00:47:58,939 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-11 00:47:58,947 [ scc.git] DEBUG Updating bdfeb5e..fc9ff96 2026-03-11 00:47:59,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/36 HTTP/1.1" 200 None 2026-03-11 00:48:00,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/35 HTTP/1.1" 200 None 2026-03-11 00:48:00,384 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head' 2026-03-11 00:48:00,659 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2026-03-11 00:48:00,659 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD 2026-03-11 00:48:00,662 [ scc.git] DEBUG ## Unique users: [] 2026-03-11 00:48:00,662 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:00,662 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:00,665 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301' 2026-03-11 00:48:00,668 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:00,670 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301' 2026-03-11 00:48:00,881 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-03-11 00:48:00,882 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-03-11 00:48:00,882 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-11 00:48:00,882 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-11 00:48:00,884 [ scc.git] DEBUG Calling 'git reset --hard fc9ff96901ce7b92e3ba51327ba7ba64fff76959' 2026-03-11 00:48:00,888 [ scc.git] DEBUG HEAD is now at fc9ff96 Bump version: 0.4.1 → 0.4.2.dev0 2026-03-11 00:48:01,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:01,032 [ scc.git] DEBUG Calling 'git merge-base fc9ff96901ce7b92e3ba51327ba7ba64fff76959 149bb248277256d589ea0db597c04739e8134301' 2026-03-11 00:48:01,035 [ scc.git] DEBUG Calling 'git diff --name-only bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9..fc9ff96901ce7b92e3ba51327ba7ba64fff76959' 2026-03-11 00:48:01,037 [ scc.git] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#85](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/consoleText) for more details. Possible conflicts: - Upstream changes - .github/workflows/publish_pypi.yml --conflicts 2026-03-11 00:48:01,039 [ scc.config] DEBUG Found github.token 2026-03-11 00:48:01,039 [ scc.git] DEBUG Not adding comment to issue #34, already --conflicts. 2026-03-11 00:48:01,039 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-11 00:48:01,076 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:01,076 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:01,078 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:48:01,113 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-11 00:48:01,116 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa80516610> has no local changes 2026-03-11 00:48:01,116 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Conflicting PRs (not included): - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#85 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/)' 2026-03-11 00:48:01,122 [ scc.git] DEBUG [detached HEAD fbc5264] merge master -Dorg -Ssuccess-only 2026-03-11 00:48:01,122 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:01,122 [ scc.repo] DEBUG ## PRs found: 2026-03-11 00:48:01,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2026-03-11 00:48:02,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2026-03-11 00:48:02,203 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-11 00:48:02,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2026-03-11 00:48:03,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:48:03,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:48:04,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2026-03-11 00:48:04,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:48:04,760 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-11 00:48:05,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2026-03-11 00:48:05,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2026-03-11 00:48:06,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2026-03-11 00:48:06,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:48:07,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2026-03-11 00:48:07,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:48:07,632 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2026-03-11 00:48:07,632 [ scc.repo] DEBUG ## Branches found: 2026-03-11 00:48:07,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-03-11 00:48:07,632 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:07,632 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:07,635 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-11 00:48:07,637 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-11 00:48:07,637 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-11 00:48:07,640 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-11 00:48:07,643 [ scc.git] DEBUG Already up to date. 2026-03-11 00:48:07,643 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-03-11 00:48:08,146 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-03-11 00:48:08,146 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-03-11 00:48:08,150 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-03-11 00:48:08,411 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-03-11 00:48:08,411 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-03-11 00:48:08,415 [ scc.git] DEBUG ## Unique users: [] 2026-03-11 00:48:08,415 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:08,415 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:08,417 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-03-11 00:48:08,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:08,422 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-03-11 00:48:08,538 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2026-03-11 00:48:08,538 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2026-03-11 00:48:08,538 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2026-03-11 00:48:08,538 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2026-03-11 00:48:08,538 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2026-03-11 00:48:08,538 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2026-03-11 00:48:08,538 [ scc.git] DEBUG Auto-merging setup.py 2026-03-11 00:48:08,538 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2026-03-11 00:48:08,538 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-11 00:48:08,538 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-11 00:48:08,541 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2026-03-11 00:48:08,544 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2026-03-11 00:48:08,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:08,695 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-03-11 00:48:08,697 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2026-03-11 00:48:08,700 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#85](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/views.py - omero_signup/urls.py - setup.py --conflicts 2026-03-11 00:48:08,702 [ scc.config] DEBUG Found github.token 2026-03-11 00:48:08,702 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2026-03-11 00:48:08,702 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-03-11 00:48:08,705 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:08,707 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-03-11 00:48:08,714 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:48:08,716 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-11 00:48:08,716 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-11 00:48:09,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:09,089 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-11 00:48:09,126 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:09,126 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:09,128 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:48:09,164 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-11 00:48:09,167 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa816d1810> has no local changes 2026-03-11 00:48:09,167 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#85 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/)' 2026-03-11 00:48:09,172 [ scc.git] DEBUG [detached HEAD ac83be8] merge master -Dorg -Ssuccess-only 2026-03-11 00:48:09,172 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:09,172 [ scc.repo] DEBUG ## PRs found: 2026-03-11 00:48:09,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2026-03-11 00:48:10,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2026-03-11 00:48:10,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2026-03-11 00:48:11,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2026-03-11 00:48:11,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2026-03-11 00:48:12,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:48:12,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2026-03-11 00:48:13,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/c18c080227e97899382d3464baa7c7885a621623?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:48:13,218 [ scc.repo] DEBUG - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-03-11 00:48:13,218 [ scc.repo] DEBUG ## Branches found: 2026-03-11 00:48:13,218 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-03-11 00:48:13,218 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:13,218 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:13,220 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-11 00:48:13,223 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-11 00:48:13,223 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-11 00:48:13,225 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-11 00:48:13,232 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2026-03-11 00:48:13,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2026-03-11 00:48:14,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2026-03-11 00:48:15,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2026-03-11 00:48:15,412 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-03-11 00:48:15,767 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2026-03-11 00:48:15,767 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-03-11 00:48:15,771 [ scc.git] DEBUG ## Unique users: [] 2026-03-11 00:48:15,771 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:15,771 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:15,774 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c18c080227e97899382d3464baa7c7885a621623' 2026-03-11 00:48:15,776 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:15,779 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (Add 'ms' target for ./docker) c18c080227e97899382d3464baa7c7885a621623' 2026-03-11 00:48:15,849 [ scc.git] DEBUG Auto-merging .github/workflows/main.yml 2026-03-11 00:48:15,849 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:48:15,852 [ scc.git] DEBUG .github/workflows/main.yml | 8 ++++++++ 2026-03-11 00:48:15,852 [ scc.git] DEBUG docker | 22 ++++++++++++++++++++++ 2026-03-11 00:48:15,852 [ scc.git] DEBUG ms/compose.yml | 11 +++++++++++ 2026-03-11 00:48:15,852 [ scc.git] DEBUG ms/example/Dockerfile | 13 +++++++++++++ 2026-03-11 00:48:15,852 [ scc.git] DEBUG ms/test | 2 ++ 2026-03-11 00:48:15,852 [ scc.git] DEBUG 5 files changed, 56 insertions(+) 2026-03-11 00:48:15,852 [ scc.git] DEBUG create mode 100644 ms/compose.yml 2026-03-11 00:48:15,852 [ scc.git] DEBUG create mode 100644 ms/example/Dockerfile 2026-03-11 00:48:15,853 [ scc.git] DEBUG create mode 100755 ms/test 2026-03-11 00:48:16,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:16,007 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-11 00:48:16,044 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:16,044 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:16,046 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:48:16,082 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-11 00:48:16,085 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa8052e950> has no local changes 2026-03-11 00:48:16,085 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Generated by OMERO-plugins-push#85 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/)' 2026-03-11 00:48:16,090 [ scc.git] DEBUG [detached HEAD 0f4abe9] merge master -Dorg -Ssuccess-only 2026-03-11 00:48:16,090 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:16,090 [ scc.repo] DEBUG ## PRs found: 2026-03-11 00:48:16,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2026-03-11 00:48:17,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2026-03-11 00:48:17,003 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-11 00:48:17,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2026-03-11 00:48:18,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:48:18,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:48:19,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2026-03-11 00:48:19,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:48:19,499 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-11 00:48:19,499 [ scc.repo] DEBUG ## Branches found: 2026-03-11 00:48:19,499 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-03-11 00:48:19,499 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:19,499 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:19,502 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-11 00:48:19,504 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-11 00:48:19,504 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-11 00:48:19,506 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-11 00:48:19,509 [ scc.git] DEBUG Already up to date. 2026-03-11 00:48:19,509 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-03-11 00:48:19,791 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2026-03-11 00:48:19,791 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-03-11 00:48:19,795 [ scc.git] DEBUG ## Unique users: [] 2026-03-11 00:48:19,795 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:19,795 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:19,797 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-03-11 00:48:19,800 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:19,802 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-03-11 00:48:19,808 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:48:19,810 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-11 00:48:19,810 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-11 00:48:19,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:19,955 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-11 00:48:19,991 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:19,991 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:19,993 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:48:20,028 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-11 00:48:20,031 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa805641d0> has no local changes 2026-03-11 00:48:20,031 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#85 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/)' 2026-03-11 00:48:20,037 [ scc.git] DEBUG [detached HEAD 38199e2] merge master -Dorg -Ssuccess-only 2026-03-11 00:48:20,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:20,037 [ scc.repo] DEBUG ## PRs found: 2026-03-11 00:48:20,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2026-03-11 00:48:20,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2026-03-11 00:48:20,993 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-11 00:48:21,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2026-03-11 00:48:22,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:48:22,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:48:23,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2026-03-11 00:48:23,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:48:23,629 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-11 00:48:23,629 [ scc.repo] DEBUG ## Branches found: 2026-03-11 00:48:23,629 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-03-11 00:48:23,629 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:23,629 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:23,632 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-11 00:48:23,634 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-11 00:48:23,634 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-11 00:48:23,637 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-11 00:48:23,643 [ scc.git] DEBUG Updating deab817..160d894 2026-03-11 00:48:24,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2026-03-11 00:48:24,334 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-03-11 00:48:24,615 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2026-03-11 00:48:24,615 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-03-11 00:48:24,619 [ scc.git] DEBUG ## Unique users: [] 2026-03-11 00:48:24,619 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:24,619 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:24,621 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-03-11 00:48:24,624 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:24,626 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-03-11 00:48:24,632 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:48:24,634 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-11 00:48:24,634 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-11 00:48:24,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:24,772 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-11 00:48:24,809 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:24,809 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:24,811 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:48:24,847 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-11 00:48:24,850 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa805b1750> has no local changes 2026-03-11 00:48:24,850 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#85 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/)' 2026-03-11 00:48:24,855 [ scc.git] DEBUG [detached HEAD 73eb05c] merge master -Dorg -Ssuccess-only 2026-03-11 00:48:24,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:24,855 [ scc.git] INFO Overriding base-branch from master to main 2026-03-11 00:48:24,855 [ scc.repo] DEBUG ## PRs found: 2026-03-11 00:48:25,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2026-03-11 00:48:25,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2026-03-11 00:48:26,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2026-03-11 00:48:26,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2026-03-11 00:48:27,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:48:27,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:48:28,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2026-03-11 00:48:28,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:48:28,653 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2026-03-11 00:48:29,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2026-03-11 00:48:29,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2026-03-11 00:48:30,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2026-03-11 00:48:30,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2026-03-11 00:48:31,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:48:31,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2026-03-11 00:48:31,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:48:31,929 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-03-11 00:48:31,930 [ scc.repo] DEBUG ## Branches found: 2026-03-11 00:48:31,930 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-03-11 00:48:31,930 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:31,930 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:31,932 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2026-03-11 00:48:31,934 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-11 00:48:31,934 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2026-03-11 00:48:31,937 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2026-03-11 00:48:31,943 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2026-03-11 00:48:32,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2026-03-11 00:48:33,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2026-03-11 00:48:33,438 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2026-03-11 00:48:33,941 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-03-11 00:48:33,942 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2026-03-11 00:48:33,946 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2026-03-11 00:48:34,464 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-03-11 00:48:34,465 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2026-03-11 00:48:34,468 [ scc.git] DEBUG ## Unique users: [] 2026-03-11 00:48:34,469 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:34,469 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:34,471 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-03-11 00:48:34,474 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:34,476 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-03-11 00:48:34,522 [ scc.git] DEBUG Auto-merging README.rst 2026-03-11 00:48:34,522 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2026-03-11 00:48:34,522 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2026-03-11 00:48:34,522 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-03-11 00:48:34,522 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-11 00:48:34,522 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-11 00:48:34,525 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-03-11 00:48:34,528 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-03-11 00:48:34,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:34,688 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-03-11 00:48:34,691 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-03-11 00:48:34,694 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#85](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2026-03-11 00:48:34,696 [ scc.config] DEBUG Found github.token 2026-03-11 00:48:34,696 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2026-03-11 00:48:34,696 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-03-11 00:48:34,699 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:34,701 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-03-11 00:48:34,709 [ scc.git] DEBUG Auto-merging README.rst 2026-03-11 00:48:34,709 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-03-11 00:48:34,710 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:48:34,713 [ scc.git] DEBUG README.rst | 3 + 2026-03-11 00:48:34,714 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2026-03-11 00:48:34,714 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2026-03-11 00:48:34,714 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2026-03-11 00:48:34,714 [ scc.git] DEBUG setup.py | 5 +- 2026-03-11 00:48:34,714 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2026-03-11 00:48:34,714 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2026-03-11 00:48:35,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:35,091 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-11 00:48:35,129 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:35,129 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:35,131 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:48:35,167 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-11 00:48:35,170 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa80581410> has no local changes 2026-03-11 00:48:35,170 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#85 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/)' 2026-03-11 00:48:35,176 [ scc.git] DEBUG [detached HEAD 34f9a72] merge master -Dorg -Ssuccess-only 2026-03-11 00:48:35,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:35,176 [ scc.repo] DEBUG ## PRs found: 2026-03-11 00:48:35,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2026-03-11 00:48:36,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2026-03-11 00:48:36,247 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-11 00:48:36,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2026-03-11 00:48:37,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:48:37,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:48:38,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2026-03-11 00:48:38,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:48:38,778 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-11 00:48:38,778 [ scc.repo] DEBUG ## Branches found: 2026-03-11 00:48:38,778 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-03-11 00:48:38,778 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:38,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:38,781 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-11 00:48:38,783 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-11 00:48:38,783 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-11 00:48:38,785 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-11 00:48:38,788 [ scc.git] DEBUG Already up to date. 2026-03-11 00:48:38,788 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2026-03-11 00:48:39,198 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2026-03-11 00:48:39,198 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2026-03-11 00:48:39,202 [ scc.git] DEBUG ## Unique users: [] 2026-03-11 00:48:39,202 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:39,202 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:39,205 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-03-11 00:48:39,207 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:39,209 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-03-11 00:48:39,216 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:48:39,218 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-11 00:48:39,218 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-11 00:48:39,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:39,360 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-11 00:48:39,396 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:39,396 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:39,398 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:48:39,434 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-11 00:48:39,437 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa8056bb50> has no local changes 2026-03-11 00:48:39,437 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#85 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/)' 2026-03-11 00:48:39,443 [ scc.git] DEBUG [detached HEAD 708c9eb] merge master -Dorg -Ssuccess-only 2026-03-11 00:48:39,443 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:39,444 [ scc.repo] DEBUG ## PRs found: 2026-03-11 00:48:39,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2026-03-11 00:48:40,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2026-03-11 00:48:40,375 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-11 00:48:40,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2026-03-11 00:48:41,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-11 00:48:41,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-11 00:48:42,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2026-03-11 00:48:42,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2026-03-11 00:48:42,826 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-11 00:48:42,826 [ scc.repo] DEBUG ## Branches found: 2026-03-11 00:48:42,826 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-03-11 00:48:42,827 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:42,827 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:42,829 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-11 00:48:42,831 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-11 00:48:42,831 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-11 00:48:42,833 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-11 00:48:42,837 [ scc.git] DEBUG Already up to date. 2026-03-11 00:48:42,837 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2026-03-11 00:48:43,120 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2026-03-11 00:48:43,120 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2026-03-11 00:48:43,124 [ scc.git] DEBUG ## Unique users: [] 2026-03-11 00:48:43,124 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:43,124 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:43,127 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-03-11 00:48:43,129 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:43,131 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-03-11 00:48:43,138 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-11 00:48:43,140 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-11 00:48:43,140 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-11 00:48:43,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:43,277 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-11 00:48:43,313 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:43,313 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:43,315 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:48:43,351 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-11 00:48:43,355 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa80534090> has no local changes 2026-03-11 00:48:43,355 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#85 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/)' 2026-03-11 00:48:43,360 [ scc.git] DEBUG [detached HEAD d8356fe] merge master -Dorg -Ssuccess-only 2026-03-11 00:48:43,361 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:43,361 [ scc.repo] DEBUG ## PRs found: 2026-03-11 00:48:43,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2026-03-11 00:48:43,712 [ scc.repo] DEBUG ## Branches found: 2026-03-11 00:48:43,712 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-03-11 00:48:43,712 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:43,712 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:43,714 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-11 00:48:43,717 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-11 00:48:43,717 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-11 00:48:43,719 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-11 00:48:43,722 [ scc.git] DEBUG Already up to date. 2026-03-11 00:48:43,722 [ scc.git] DEBUG ## Unique users: [] 2026-03-11 00:48:43,722 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:43,722 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:43,724 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-11 00:48:43,759 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:43,759 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:43,762 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:48:43,796 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-11 00:48:43,799 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa805d24d0> has no local changes 2026-03-11 00:48:43,799 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#85 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/)' 2026-03-11 00:48:43,805 [ scc.git] DEBUG [detached HEAD 07d7b4f] merge master -Dorg -Ssuccess-only 2026-03-11 00:48:43,805 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:43,805 [ scc.git] INFO Overriding base-branch from master to develop 2026-03-11 00:48:43,805 [ scc.repo] DEBUG ## PRs found: 2026-03-11 00:48:44,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 2 2026-03-11 00:48:44,174 [ scc.repo] DEBUG ## Branches found: 2026-03-11 00:48:44,175 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-03-11 00:48:44,175 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:44,175 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:44,177 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-03-11 00:48:44,179 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-11 00:48:44,179 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-03-11 00:48:44,182 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-03-11 00:48:44,193 [ scc.git] DEBUG Updating 4b4c755..5b4d768 2026-03-11 00:48:45,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-03-11 00:48:46,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-03-11 00:48:46,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-03-11 00:48:47,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-03-11 00:48:48,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2026-03-11 00:48:48,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2026-03-11 00:48:49,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2026-03-11 00:48:49,622 [ scc.git] DEBUG ## Unique users: [] 2026-03-11 00:48:49,622 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:49,622 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:49,625 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-11 00:48:49,663 [ scc.git] DEBUG Get sha1 of %s 2026-03-11 00:48:49,663 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-11 00:48:49,665 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:48:49,701 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-11 00:48:49,704 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa803c43d0> has no local changes 2026-03-11 00:48:49,704 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#85 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/)' 2026-03-11 00:48:49,710 [ scc.git] DEBUG [detached HEAD 5732367] merge master -Dorg -Ssuccess-only 2026-03-11 00:48:49,710 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:49,710 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-11 00:48:49,778 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2026-03-11 00:48:50,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:50,060 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2026-03-11 00:48:50,062 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2026-03-11 00:48:50,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:50,477 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2026-03-11 00:48:50,479 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2026-03-11 00:48:50,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:50,880 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2026-03-11 00:48:50,882 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2026-03-11 00:48:51,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:51,320 [ scc.config] DEBUG Found submodule.omero-figure.url 2026-03-11 00:48:51,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:51,713 [ scc.config] DEBUG Found submodule.omero-figure.branch 2026-03-11 00:48:51,715 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2026-03-11 00:48:52,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:52,120 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2026-03-11 00:48:52,121 [ scc.config] DEBUG Found submodule.omero-gallery.url 2026-03-11 00:48:52,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:52,580 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2026-03-11 00:48:52,582 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2026-03-11 00:48:52,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:52,982 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2026-03-11 00:48:52,983 [ scc.config] DEBUG Found submodule.omero-mapr.url 2026-03-11 00:48:53,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:53,398 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2026-03-11 00:48:53,400 [ scc.config] DEBUG Found submodule.omero-metadata.url 2026-03-11 00:48:53,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:53,949 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2026-03-11 00:48:53,951 [ scc.config] DEBUG Found submodule.omero-parade.url 2026-03-11 00:48:54,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:54,377 [ scc.config] DEBUG Found submodule.omero-parade.branch 2026-03-11 00:48:54,379 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2026-03-11 00:48:54,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:54,769 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2026-03-11 00:48:54,771 [ scc.config] DEBUG Found submodule.omero-rois.url 2026-03-11 00:48:55,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:55,166 [ scc.config] DEBUG Found submodule.omero-signup.url 2026-03-11 00:48:55,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:55,560 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2026-03-11 00:48:55,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:55,946 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2026-03-11 00:48:55,948 [ scc.config] DEBUG Found submodule.omero-upload.url 2026-03-11 00:48:56,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:56,375 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2026-03-11 00:48:56,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:56,782 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2026-03-11 00:48:57,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:57,177 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2026-03-11 00:48:57,179 [ scc.config] DEBUG Found submodule.omero-weberror.url 2026-03-11 00:48:57,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:57,564 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2026-03-11 00:48:57,566 [ scc.config] DEBUG Found submodule.omero-webtest.url 2026-03-11 00:48:57,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:57,950 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2026-03-11 00:48:57,952 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2026-03-11 00:48:58,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:58,350 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2026-03-11 00:48:58,352 [ scc.config] DEBUG Found submodule.scripts.url 2026-03-11 00:48:58,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-11 00:48:58,737 [ scc.config] DEBUG Found submodule.scripts.branch 2026-03-11 00:48:58,737 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-11 00:48:58,811 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa815e8490> has local changes 2026-03-11 00:48:58,812 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Excluded PRs: - PR 669 will-moore 'Standalone python script' (stage: draft) - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) Updating 9cc36cde..acada9be Previously merged: - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 662 will-moore 'Export script handles OME-zarr images' Conflicting PRs (not included): - PR 663 will-moore 'Zarr' - PR 666 will-moore 'Standalone app' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..5e2de43 Previously merged: - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 513 jburel 'Bump Python version' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Conflicting PRs (not included): - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#85 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/85/)' 2026-03-11 00:48:58,823 [ scc.git] DEBUG [detached HEAD b7f369b] merge master -Dorg -Ssuccess-only 2026-03-11 00:48:58,823 [ scc.merge] INFO Repository: ome/omero-plugins 2026-03-11 00:48:58,824 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2026-03-11 00:48:58,824 [ scc.merge] INFO Already up to date. 2026-03-11 00:48:58,824 [ scc.merge] INFO 2026-03-11 00:48:58,824 [ scc.merge] INFO Merged PRs: 2026-03-11 00:48:58,824 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-03-11 00:48:58,824 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-03-11 00:48:58,824 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-03-11 00:48:58,824 [ scc.merge] INFO 2026-03-11 00:48:58,824 [ scc.merge] INFO Repository: ome/minimal-omero-client 2026-03-11 00:48:58,824 [ scc.merge] INFO Already up to date. 2026-03-11 00:48:58,824 [ scc.merge] INFO 2026-03-11 00:48:58,824 [ scc.merge] INFO 2026-03-11 00:48:58,824 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2026-03-11 00:48:58,824 [ scc.merge] INFO Excluded PRs: 2026-03-11 00:48:58,824 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2026-03-11 00:48:58,824 [ scc.merge] INFO Already up to date. 2026-03-11 00:48:58,824 [ scc.merge] INFO 2026-03-11 00:48:58,824 [ scc.merge] INFO Merged PRs: 2026-03-11 00:48:58,825 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-11 00:48:58,825 [ scc.merge] INFO 2026-03-11 00:48:58,825 [ scc.merge] INFO Repository: ome/omero-cli-render 2026-03-11 00:48:58,825 [ scc.merge] INFO Excluded PRs: 2026-03-11 00:48:58,825 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2026-03-11 00:48:58,825 [ scc.merge] INFO Updating ce6e13c..68b7303 2026-03-11 00:48:58,825 [ scc.merge] INFO Previously merged: 2026-03-11 00:48:58,825 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2026-03-11 00:48:58,825 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2026-03-11 00:48:58,825 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2026-03-11 00:48:58,825 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2026-03-11 00:48:58,825 [ scc.merge] INFO 2026-03-11 00:48:58,825 [ scc.merge] INFO Merged PRs: 2026-03-11 00:48:58,825 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2026-03-11 00:48:58,825 [ scc.merge] INFO 2026-03-11 00:48:58,825 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2026-03-11 00:48:58,825 [ scc.merge] INFO Excluded PRs: 2026-03-11 00:48:58,825 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' (exclude comment) 2026-03-11 00:48:58,825 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2026-03-11 00:48:58,825 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2026-03-11 00:48:58,825 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2026-03-11 00:48:58,825 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-03-11 00:48:58,825 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2026-03-11 00:48:58,825 [ scc.merge] INFO Updating 11d3587..9f844b8 2026-03-11 00:48:58,825 [ scc.merge] INFO Previously merged: 2026-03-11 00:48:58,825 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2026-03-11 00:48:58,825 [ scc.merge] INFO - PR 192 jburel 'Set Omero pixel size' 2026-03-11 00:48:58,825 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2026-03-11 00:48:58,825 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-11 00:48:58,826 [ scc.merge] INFO 2026-03-11 00:48:58,826 [ scc.merge] INFO Merged PRs: 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 193 dominikl 'Only parse import uris if stated' 2026-03-11 00:48:58,826 [ scc.merge] INFO 2026-03-11 00:48:58,826 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-03-11 00:48:58,826 [ scc.merge] INFO 2026-03-11 00:48:58,826 [ scc.merge] INFO Repository: ome/omero-figure 2026-03-11 00:48:58,826 [ scc.merge] INFO Excluded PRs: 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 669 will-moore 'Standalone python script' (stage: draft) 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) 2026-03-11 00:48:58,826 [ scc.merge] INFO Updating 9cc36cde..acada9be 2026-03-11 00:48:58,826 [ scc.merge] INFO Previously merged: 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 667 Tom-TBT 'Label suggestion interface' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 664 Nirkan 'Handle many channels ' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2026-03-11 00:48:58,826 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2026-03-11 00:48:58,827 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2026-03-11 00:48:58,827 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2026-03-11 00:48:58,827 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2026-03-11 00:48:58,827 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2026-03-11 00:48:58,827 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2026-03-11 00:48:58,827 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2026-03-11 00:48:58,827 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2026-03-11 00:48:58,827 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-11 00:48:58,827 [ scc.merge] INFO 2026-03-11 00:48:58,827 [ scc.merge] INFO Merged PRs: 2026-03-11 00:48:58,827 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-03-11 00:48:58,827 [ scc.merge] INFO - PR 662 will-moore 'Export script handles OME-zarr images' 2026-03-11 00:48:58,827 [ scc.merge] INFO 2026-03-11 00:48:58,827 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-11 00:48:58,827 [ scc.merge] INFO - PR 663 will-moore 'Zarr' 2026-03-11 00:48:58,827 [ scc.merge] INFO - PR 666 will-moore 'Standalone app' 2026-03-11 00:48:58,827 [ scc.merge] INFO 2026-03-11 00:48:58,827 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2026-03-11 00:48:58,827 [ scc.merge] INFO Already up to date. 2026-03-11 00:48:58,827 [ scc.merge] INFO 2026-03-11 00:48:58,827 [ scc.merge] INFO Merged PRs: 2026-03-11 00:48:58,827 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2026-03-11 00:48:58,827 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-11 00:48:58,827 [ scc.merge] INFO 2026-03-11 00:48:58,827 [ scc.merge] INFO Repository: ome/omero-gallery 2026-03-11 00:48:58,827 [ scc.merge] INFO Already up to date. 2026-03-11 00:48:58,827 [ scc.merge] INFO 2026-03-11 00:48:58,827 [ scc.merge] INFO Merged PRs: 2026-03-11 00:48:58,827 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-03-11 00:48:58,827 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-03-11 00:48:58,827 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-03-11 00:48:58,827 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-03-11 00:48:58,827 [ scc.merge] INFO 2026-03-11 00:48:58,827 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-11 00:48:58,827 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-03-11 00:48:58,827 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-03-11 00:48:58,827 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-03-11 00:48:58,827 [ scc.merge] INFO 2026-03-11 00:48:58,827 [ scc.merge] INFO Repository: ome/omero-iviewer 2026-03-11 00:48:58,827 [ scc.merge] INFO Excluded PRs: 2026-03-11 00:48:58,827 [ scc.merge] INFO - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) 2026-03-11 00:48:58,827 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft) 2026-03-11 00:48:58,827 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) 2026-03-11 00:48:58,827 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2026-03-11 00:48:58,828 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2026-03-11 00:48:58,828 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2026-03-11 00:48:58,828 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure) 2026-03-11 00:48:58,828 [ scc.merge] INFO Updating 7a798ce..5e2de43 2026-03-11 00:48:58,828 [ scc.merge] INFO Previously merged: 2026-03-11 00:48:58,828 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2026-03-11 00:48:58,828 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-11 00:48:58,828 [ scc.merge] INFO 2026-03-11 00:48:58,828 [ scc.merge] INFO Merged PRs: 2026-03-11 00:48:58,828 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2026-03-11 00:48:58,828 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2026-03-11 00:48:58,828 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2026-03-11 00:48:58,828 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-03-11 00:48:58,828 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2026-03-11 00:48:58,828 [ scc.merge] INFO - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' 2026-03-11 00:48:58,828 [ scc.merge] INFO 2026-03-11 00:48:58,828 [ scc.merge] INFO Repository: ome/omero-mapr 2026-03-11 00:48:58,828 [ scc.merge] INFO Excluded PRs: 2026-03-11 00:48:58,828 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2026-03-11 00:48:58,828 [ scc.merge] INFO Already up to date. 2026-03-11 00:48:58,828 [ scc.merge] INFO 2026-03-11 00:48:58,828 [ scc.merge] INFO Merged PRs: 2026-03-11 00:48:58,828 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2026-03-11 00:48:58,828 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-11 00:48:58,828 [ scc.merge] INFO 2026-03-11 00:48:58,828 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-11 00:48:58,828 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-11 00:48:58,828 [ scc.merge] INFO 2026-03-11 00:48:58,828 [ scc.merge] INFO Repository: ome/omero-metadata 2026-03-11 00:48:58,828 [ scc.merge] INFO Updating 3cd120c..55060a2 2026-03-11 00:48:58,828 [ scc.merge] INFO Previously merged: 2026-03-11 00:48:58,828 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-11 00:48:58,828 [ scc.merge] INFO 2026-03-11 00:48:58,828 [ scc.merge] INFO Merged PRs: 2026-03-11 00:48:58,828 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-03-11 00:48:58,828 [ scc.merge] INFO 2026-03-11 00:48:58,828 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-11 00:48:58,828 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-03-11 00:48:58,828 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-03-11 00:48:58,828 [ scc.merge] INFO 2026-03-11 00:48:58,828 [ scc.merge] INFO Repository: ome/omero-parade 2026-03-11 00:48:58,828 [ scc.merge] INFO Excluded PRs: 2026-03-11 00:48:58,828 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2026-03-11 00:48:58,828 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2026-03-11 00:48:58,828 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2026-03-11 00:48:58,828 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2026-03-11 00:48:58,828 [ scc.merge] INFO Already up to date. 2026-03-11 00:48:58,828 [ scc.merge] INFO 2026-03-11 00:48:58,829 [ scc.merge] INFO Merged PRs: 2026-03-11 00:48:58,829 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-03-11 00:48:58,829 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-03-11 00:48:58,829 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-11 00:48:58,829 [ scc.merge] INFO 2026-03-11 00:48:58,829 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2026-03-11 00:48:58,829 [ scc.merge] INFO Already up to date. 2026-03-11 00:48:58,829 [ scc.merge] INFO 2026-03-11 00:48:58,829 [ scc.merge] INFO Merged PRs: 2026-03-11 00:48:58,829 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-11 00:48:58,829 [ scc.merge] INFO 2026-03-11 00:48:58,829 [ scc.merge] INFO Repository: ome/omero-rois 2026-03-11 00:48:58,829 [ scc.merge] INFO Excluded PRs: 2026-03-11 00:48:58,829 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-03-11 00:48:58,829 [ scc.merge] INFO Updating bdfeb5e..fc9ff96 2026-03-11 00:48:58,829 [ scc.merge] INFO Previously merged: 2026-03-11 00:48:58,829 [ scc.merge] INFO - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' 2026-03-11 00:48:58,829 [ scc.merge] INFO - PR 35 will-moore 'Add roi to array functions' 2026-03-11 00:48:58,829 [ scc.merge] INFO 2026-03-11 00:48:58,829 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-11 00:48:58,829 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-11 00:48:58,829 [ scc.merge] INFO 2026-03-11 00:48:58,829 [ scc.merge] INFO Repository: ome/omero-signup 2026-03-11 00:48:58,829 [ scc.merge] INFO Already up to date. 2026-03-11 00:48:58,829 [ scc.merge] INFO 2026-03-11 00:48:58,829 [ scc.merge] INFO Merged PRs: 2026-03-11 00:48:58,829 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-11 00:48:58,829 [ scc.merge] INFO 2026-03-11 00:48:58,829 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-11 00:48:58,829 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2026-03-11 00:48:58,829 [ scc.merge] INFO 2026-03-11 00:48:58,829 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2026-03-11 00:48:58,829 [ scc.merge] INFO Excluded PRs: 2026-03-11 00:48:58,829 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2026-03-11 00:48:58,829 [ scc.merge] INFO Updating cda3ec6..c8a0015 2026-03-11 00:48:58,829 [ scc.merge] INFO Previously merged: 2026-03-11 00:48:58,829 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2026-03-11 00:48:58,829 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2026-03-11 00:48:58,829 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2026-03-11 00:48:58,829 [ scc.merge] INFO 2026-03-11 00:48:58,829 [ scc.merge] INFO Merged PRs: 2026-03-11 00:48:58,829 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-03-11 00:48:58,829 [ scc.merge] INFO 2026-03-11 00:48:58,829 [ scc.merge] INFO Repository: ome/omero-upload 2026-03-11 00:48:58,829 [ scc.merge] INFO Already up to date. 2026-03-11 00:48:58,829 [ scc.merge] INFO 2026-03-11 00:48:58,829 [ scc.merge] INFO Merged PRs: 2026-03-11 00:48:58,829 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-11 00:48:58,829 [ scc.merge] INFO 2026-03-11 00:48:58,830 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2026-03-11 00:48:58,830 [ scc.merge] INFO Updating deab817..160d894 2026-03-11 00:48:58,830 [ scc.merge] INFO Previously merged: 2026-03-11 00:48:58,830 [ scc.merge] INFO - PR 20 jburel 'Build' 2026-03-11 00:48:58,830 [ scc.merge] INFO 2026-03-11 00:48:58,830 [ scc.merge] INFO Merged PRs: 2026-03-11 00:48:58,830 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-11 00:48:58,830 [ scc.merge] INFO 2026-03-11 00:48:58,830 [ scc.merge] INFO Repository: ome/omero-web-zarr 2026-03-11 00:48:58,830 [ scc.merge] INFO Excluded PRs: 2026-03-11 00:48:58,830 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2026-03-11 00:48:58,830 [ scc.merge] INFO Updating 8f3c313..4e1e685 2026-03-11 00:48:58,830 [ scc.merge] INFO Previously merged: 2026-03-11 00:48:58,830 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2026-03-11 00:48:58,830 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2026-03-11 00:48:58,830 [ scc.merge] INFO 2026-03-11 00:48:58,830 [ scc.merge] INFO Merged PRs: 2026-03-11 00:48:58,830 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2026-03-11 00:48:58,830 [ scc.merge] INFO 2026-03-11 00:48:58,830 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-11 00:48:58,830 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-03-11 00:48:58,830 [ scc.merge] INFO 2026-03-11 00:48:58,830 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2026-03-11 00:48:58,830 [ scc.merge] INFO Already up to date. 2026-03-11 00:48:58,830 [ scc.merge] INFO 2026-03-11 00:48:58,830 [ scc.merge] INFO Merged PRs: 2026-03-11 00:48:58,830 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-11 00:48:58,830 [ scc.merge] INFO 2026-03-11 00:48:58,830 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2026-03-11 00:48:58,830 [ scc.merge] INFO Already up to date. 2026-03-11 00:48:58,830 [ scc.merge] INFO 2026-03-11 00:48:58,830 [ scc.merge] INFO Merged PRs: 2026-03-11 00:48:58,830 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-11 00:48:58,830 [ scc.merge] INFO 2026-03-11 00:48:58,830 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2026-03-11 00:48:58,830 [ scc.merge] INFO Already up to date. 2026-03-11 00:48:58,830 [ scc.merge] INFO 2026-03-11 00:48:58,830 [ scc.merge] INFO 2026-03-11 00:48:58,830 [ scc.merge] INFO Repository: ome/scripts 2026-03-11 00:48:58,830 [ scc.merge] INFO Updating 4b4c755..5b4d768 2026-03-11 00:48:58,830 [ scc.merge] INFO Previously merged: 2026-03-11 00:48:58,830 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-03-11 00:48:58,830 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-03-11 00:48:58,830 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-03-11 00:48:58,830 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-03-11 00:48:58,830 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2026-03-11 00:48:58,830 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2026-03-11 00:48:58,830 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2026-03-11 00:48:58,831 [ scc.merge] INFO 2026-03-11 00:48:58,831 [ scc.merge] INFO 2026-03-11 00:48:58,831 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-03-11 00:48:58,831 [ scc.git] DEBUG Calling 'git remote' 2026-03-11 00:48:58,833 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-03-11 00:48:58,833 [ scc.git] DEBUG Calling 'git remote' 2026-03-11 00:48:58,835 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:58,835 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-03-11 00:48:58,835 [ scc.git] DEBUG Calling 'git remote' 2026-03-11 00:48:58,837 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:58,837 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-03-11 00:48:58,837 [ scc.git] DEBUG Calling 'git remote' 2026-03-11 00:48:58,839 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:58,839 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-03-11 00:48:58,839 [ scc.git] DEBUG Calling 'git remote' 2026-03-11 00:48:58,841 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:58,841 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-03-11 00:48:58,841 [ scc.git] DEBUG Calling 'git remote' 2026-03-11 00:48:58,843 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:58,843 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-03-11 00:48:58,843 [ scc.git] DEBUG Calling 'git remote' 2026-03-11 00:48:58,845 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:58,845 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-03-11 00:48:58,845 [ scc.git] DEBUG Calling 'git remote' 2026-03-11 00:48:58,847 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:58,847 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-03-11 00:48:58,847 [ scc.git] DEBUG Calling 'git remote' 2026-03-11 00:48:58,849 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:58,849 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-03-11 00:48:58,849 [ scc.git] DEBUG Calling 'git remote' 2026-03-11 00:48:58,851 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:58,851 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-03-11 00:48:58,851 [ scc.git] DEBUG Calling 'git remote' 2026-03-11 00:48:58,853 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:58,853 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-03-11 00:48:58,854 [ scc.git] DEBUG Calling 'git remote' 2026-03-11 00:48:58,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:58,856 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-03-11 00:48:58,856 [ scc.git] DEBUG Calling 'git remote' 2026-03-11 00:48:58,858 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:58,858 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-03-11 00:48:58,858 [ scc.git] DEBUG Calling 'git remote' 2026-03-11 00:48:58,860 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:58,860 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-03-11 00:48:58,860 [ scc.git] DEBUG Calling 'git remote' 2026-03-11 00:48:58,862 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:58,862 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-03-11 00:48:58,862 [ scc.git] DEBUG Calling 'git remote' 2026-03-11 00:48:58,864 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:58,864 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-03-11 00:48:58,864 [ scc.git] DEBUG Calling 'git remote' 2026-03-11 00:48:58,866 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:58,866 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-03-11 00:48:58,866 [ scc.git] DEBUG Calling 'git remote' 2026-03-11 00:48:58,868 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:58,868 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-03-11 00:48:58,868 [ scc.git] DEBUG Calling 'git remote' 2026-03-11 00:48:58,870 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:58,870 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-03-11 00:48:58,870 [ scc.git] DEBUG Calling 'git remote' 2026-03-11 00:48:58,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:58,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-03-11 00:48:58,872 [ scc.git] DEBUG Calling 'git remote' 2026-03-11 00:48:58,874 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:58,874 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-03-11 00:48:58,874 [ scc.git] DEBUG Calling 'git remote' 2026-03-11 00:48:58,876 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-11 00:48:58,876 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-03-11 00:48:58,876 [ scc.git] DEBUG Calling 'git remote' 2026-03-11 00:48:58,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.6-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 6992978] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD 71feae0] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-03-11 00:49:45,315 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-03-11 00:49:54,729 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-03-11 00:49:57,178 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-03-11 00:50:01,819 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-03-11 00:50:44,154 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS