Started by upstream project "Trigger" build number 100 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/80042be2aab2f4c47851263660cdf7971582cd0b3548009ec2196c6f3069ef1a/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 76 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.0.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.0.1 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.11.0-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-46.0.5-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (39 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.2.25-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.8.1-py3-none-any.whl (432 kB) Using cached pyjwt-2.11.0-py3-none-any.whl (28 kB) Using cached cryptography-46.0.5-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (193 kB) Using cached idna-3.11-py3-none-any.whl (71 kB) Using cached certifi-2026.2.25-py3-none-any.whl (153 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.0-py3-none-any.whl (48 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2026.2.25 cffi-2.0.0 charset_normalizer-3.4.5 cryptography-46.0.5 future-1.0.0 idna-3.11 pycparser-3.0 pyjwt-2.11.0 pynacl-1.6.2 requests-2.32.5 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-03-10 00:36:44,766 [ scc.config] DEBUG Found github.token 2026-03-10 00:36:44,767 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-03-10 00:36:44,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:36:45,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:36:45,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-03-10 00:36:45,781 [ scc.gh] DEBUG 4458 remaining from 5000 (Reset at 01:03 2026-03-10 00:36:45,781 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-10 00:36:45,784 [ scc.git] DEBUG Check current status 2026-03-10 00:36:45,784 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-10 00:36:45,786 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-03-10 00:36:45,786 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-10 00:36:45,833 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-03-10 00:36:45,836 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-03-10 00:36:45,838 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-03-10 00:36:45,842 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-03-10 00:36:45,846 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-03-10 00:36:45,849 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-03-10 00:36:45,851 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-03-10 00:36:45,854 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-03-10 00:36:45,857 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-03-10 00:36:45,860 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-03-10 00:36:45,862 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-03-10 00:36:45,866 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-03-10 00:36:45,869 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-03-10 00:36:45,872 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-03-10 00:36:45,875 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-03-10 00:36:45,878 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-03-10 00:36:45,880 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-03-10 00:36:45,883 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-03-10 00:36:45,885 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-03-10 00:36:45,888 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-03-10 00:36:45,891 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-03-10 00:36:45,894 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-03-10 00:36:45,897 [ scc.config] DEBUG Found remote.origin.url 2026-03-10 00:36:46,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-03-10 00:36:46,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-10 00:36:47,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-10 00:36:47,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-10 00:36:48,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-10 00:36:48,019 [ scc.git] DEBUG Resetting... 2026-03-10 00:36:48,019 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-03-10 00:36:48,027 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-03-10 00:36:48,027 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-03-10 00:36:48,128 [ scc.git] DEBUG Check current status 2026-03-10 00:36:48,128 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-10 00:36:48,130 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-03-10 00:36:48,130 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-10 00:36:48,176 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-03-10 00:36:48,179 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-03-10 00:36:48,182 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-03-10 00:36:48,185 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-03-10 00:36:48,188 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-03-10 00:36:48,191 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-03-10 00:36:48,194 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-03-10 00:36:48,196 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-03-10 00:36:48,199 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-03-10 00:36:48,202 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-03-10 00:36:48,205 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-03-10 00:36:48,207 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-03-10 00:36:48,211 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-03-10 00:36:48,213 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-03-10 00:36:48,216 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-03-10 00:36:48,219 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-03-10 00:36:48,221 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-03-10 00:36:48,224 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-03-10 00:36:48,226 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-03-10 00:36:48,229 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-03-10 00:36:48,232 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-03-10 00:36:48,235 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-03-10 00:36:48,236 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-03-10 00:36:48,236 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-03-10 00:36:48,236 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-03-10 00:36:48,236 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-03-10 00:36:48,236 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-03-10 00:36:48,236 [ scc.repo] DEBUG ## PRs found: 2026-03-10 00:36:48,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-03-10 00:36:49,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-03-10 00:36:49,130 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-10 00:36:49,130 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-03-10 00:36:49,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-03-10 00:36:49,658 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-10 00:36:49,658 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-03-10 00:36:50,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-03-10 00:36:50,168 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-10 00:36:50,168 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-03-10 00:36:50,168 [ scc.repo] DEBUG ## Branches found: 2026-03-10 00:36:50,168 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:36:50,168 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:36:50,171 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-10 00:36:50,173 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-10 00:36:50,173 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-10 00:36:50,176 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-10 00:36:50,179 [ scc.git] DEBUG Already up to date. 2026-03-10 00:36:50,179 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-03-10 00:36:50,466 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-10 00:36:50,466 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-03-10 00:36:50,470 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-03-10 00:36:50,875 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-10 00:36:50,875 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-03-10 00:36:50,879 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-03-10 00:36:51,141 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-10 00:36:51,141 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-03-10 00:36:51,145 [ scc.git] DEBUG ## Unique users: [] 2026-03-10 00:36:51,145 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:36:51,145 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:36:51,147 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-03-10 00:36:51,149 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:36:51,151 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-03-10 00:36:51,166 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:36:51,168 [ scc.git] DEBUG scripts | 2 +- 2026-03-10 00:36:51,168 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-10 00:36:51,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:36:51,312 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-03-10 00:36:51,315 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:36:51,317 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-03-10 00:36:51,331 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:36:51,333 [ scc.git] DEBUG omero-figure | 2 +- 2026-03-10 00:36:51,333 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-10 00:36:51,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:36:51,713 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-03-10 00:36:51,715 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:36:51,717 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-03-10 00:36:51,731 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:36:51,734 [ scc.git] DEBUG omero-iviewer | 2 +- 2026-03-10 00:36:51,734 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-10 00:36:52,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:36:52,108 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-10 00:36:52,171 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-03-10 00:36:52,193 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-03-10 00:36:52,207 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-03-10 00:36:52,208 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:36:52,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:36:52,210 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-10 00:36:52,288 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa12d3433d0> has no local changes 2026-03-10 00:36:52,288 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#84 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-03-10 00:36:52,357 [ scc.git] DEBUG [detached HEAD 1972526] merge master -Dorg -Snone 2026-03-10 00:36:52,357 [ scc.merge] INFO Repository: ome/omero-plugins 2026-03-10 00:36:52,357 [ scc.merge] INFO Already up to date. 2026-03-10 00:36:52,357 [ scc.merge] INFO 2026-03-10 00:36:52,357 [ scc.merge] INFO Merged PRs: 2026-03-10 00:36:52,357 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-03-10 00:36:52,357 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-03-10 00:36:52,357 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-03-10 00:36:52,357 [ scc.merge] INFO 2026-03-10 00:36:52,357 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-03-10 00:36:52,357 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' From https://github.com/ome/omero-cli-zarr + e501174...6b19853 pre-commit-ci-update-config -> origin/pre-commit-ci-update-config (forced update) Submodule path 'omero-cli-zarr': checked out '9f844b877d8e19e42a69d7ba43f7dc086680fbec' From https://github.com/ome/omero-figure c40849ec..acada9be master -> origin/master * [new tag] v7.4.1 -> v7.4.1 Submodule path 'omero-figure': checked out 'acada9be0cc8759f88dbfd89e8f1f7d69955749c' Submodule path 'omero-iviewer': checked out '5e2de43ad401fb00690a79644056e0ac15fabfd5' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' From https://github.com/ome/omero-rois + bf3e7d7...ebcd8c4 pre-commit-ci-update-config -> origin/pre-commit-ci-update-config (forced update) Submodule path 'omero-rois': checked out 'fc9ff96901ce7b92e3ba51327ba7ba64fff76959' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2026-03-10 00:37:01,158 [ scc.config] DEBUG Found github.token 2026-03-10 00:37:01,160 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-03-10 00:37:01,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:37:01,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:37:02,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-03-10 00:37:02,168 [ scc.gh] DEBUG 4444 remaining from 5000 (Reset at 01:03 2026-03-10 00:37:02,168 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-10 00:37:02,170 [ scc.git] DEBUG Check current status 2026-03-10 00:37:02,170 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-10 00:37:02,173 [ scc.git] DEBUG 1972526 merge master -Dorg -Snone 2026-03-10 00:37:02,173 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-10 00:37:02,218 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-03-10 00:37:02,220 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-03-10 00:37:02,223 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2026-03-10 00:37:02,227 [ scc.git] DEBUG +9f844b877d8e19e42a69d7ba43f7dc086680fbec omero-cli-zarr (v0.8.0-1-g9f844b8) 2026-03-10 00:37:02,231 [ scc.git] DEBUG +acada9be0cc8759f88dbfd89e8f1f7d69955749c omero-figure (v7.4.1-1-gacada9be) 2026-03-10 00:37:02,234 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-03-10 00:37:02,236 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-03-10 00:37:02,240 [ scc.git] DEBUG +5e2de43ad401fb00690a79644056e0ac15fabfd5 omero-iviewer (v0.16.0-20-g5e2de43) 2026-03-10 00:37:02,242 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-03-10 00:37:02,245 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2026-03-10 00:37:02,248 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-03-10 00:37:02,251 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-03-10 00:37:02,253 [ scc.git] DEBUG +fc9ff96901ce7b92e3ba51327ba7ba64fff76959 omero-rois (v0.4.1-1-gfc9ff96) 2026-03-10 00:37:02,256 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-03-10 00:37:02,259 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2026-03-10 00:37:02,262 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-03-10 00:37:02,265 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2026-03-10 00:37:02,268 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2026-03-10 00:37:02,270 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-03-10 00:37:02,273 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-03-10 00:37:02,276 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-03-10 00:37:02,279 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 scripts (v5.10.0-1-g5b4d768) 2026-03-10 00:37:02,281 [ scc.config] DEBUG Found remote.origin.url 2026-03-10 00:37:02,282 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-03-10 00:37:02,283 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2026-03-10 00:37:02,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-03-10 00:37:03,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-10 00:37:03,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-10 00:37:03,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-10 00:37:04,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-10 00:37:04,377 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:37:04,448 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-03-10 00:37:04,448 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-10 00:37:04,450 [ scc.git] DEBUG Check current status 2026-03-10 00:37:04,450 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-10 00:37:04,452 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2026-03-10 00:37:04,452 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-10 00:37:04,492 [ scc.config] DEBUG Found remote.origin.url 2026-03-10 00:37:04,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2026-03-10 00:37:05,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-10 00:37:05,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-10 00:37:06,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-10 00:37:06,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-10 00:37:06,644 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:37:06,682 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:37:06,682 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-03-10 00:37:06,683 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-10 00:37:06,685 [ scc.git] DEBUG Check current status 2026-03-10 00:37:06,685 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-10 00:37:06,687 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2026-03-10 00:37:06,687 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-10 00:37:06,725 [ scc.config] DEBUG Found remote.origin.url 2026-03-10 00:37:07,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2026-03-10 00:37:07,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-10 00:37:08,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-10 00:37:08,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-10 00:37:09,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-10 00:37:09,053 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:37:09,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:37:09,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-03-10 00:37:09,091 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-10 00:37:09,094 [ scc.git] DEBUG Check current status 2026-03-10 00:37:09,094 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-10 00:37:09,096 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2026-03-10 00:37:09,096 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-10 00:37:09,135 [ scc.config] DEBUG Found remote.origin.url 2026-03-10 00:37:09,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2026-03-10 00:37:10,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-10 00:37:10,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-10 00:37:11,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-10 00:37:11,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-10 00:37:11,460 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:37:11,500 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:37:11,500 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-03-10 00:37:11,500 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-10 00:37:11,502 [ scc.git] DEBUG Check current status 2026-03-10 00:37:11,502 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-10 00:37:11,505 [ scc.git] DEBUG 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-03-10 00:37:11,505 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-10 00:37:11,545 [ scc.config] DEBUG Found remote.origin.url 2026-03-10 00:37:11,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2026-03-10 00:37:12,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-10 00:37:12,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-10 00:37:13,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-10 00:37:13,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-10 00:37:13,752 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:37:13,790 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:37:13,791 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-03-10 00:37:13,791 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-10 00:37:13,793 [ scc.git] DEBUG Check current status 2026-03-10 00:37:13,793 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-10 00:37:13,796 [ scc.git] DEBUG acada9be Bump version: 7.4.1 → 7.4.2.dev0 2026-03-10 00:37:13,796 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-10 00:37:13,833 [ scc.config] DEBUG Found remote.origin.url 2026-03-10 00:37:14,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2026-03-10 00:37:14,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-10 00:37:15,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-10 00:37:15,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-10 00:37:15,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-10 00:37:15,972 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:37:16,009 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:37:16,009 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-03-10 00:37:16,009 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-10 00:37:16,012 [ scc.git] DEBUG Check current status 2026-03-10 00:37:16,012 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-10 00:37:16,014 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2026-03-10 00:37:16,014 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-10 00:37:16,055 [ scc.config] DEBUG Found remote.origin.url 2026-03-10 00:37:16,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2026-03-10 00:37:16,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-10 00:37:17,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-10 00:37:17,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-10 00:37:18,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-10 00:37:18,188 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:37:18,227 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:37:18,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-03-10 00:37:18,228 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-10 00:37:18,230 [ scc.git] DEBUG Check current status 2026-03-10 00:37:18,230 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-10 00:37:18,232 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2026-03-10 00:37:18,232 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-10 00:37:18,272 [ scc.config] DEBUG Found remote.origin.url 2026-03-10 00:37:18,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2026-03-10 00:37:19,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-10 00:37:19,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-10 00:37:20,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-10 00:37:20,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-10 00:37:20,413 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:37:20,453 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:37:20,453 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-03-10 00:37:20,453 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-10 00:37:20,455 [ scc.git] DEBUG Check current status 2026-03-10 00:37:20,455 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-10 00:37:20,458 [ scc.git] DEBUG 5e2de43 Merge pull request #510 from joshmoore/issue-509 2026-03-10 00:37:20,458 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-10 00:37:20,497 [ scc.config] DEBUG Found remote.origin.url 2026-03-10 00:37:20,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2026-03-10 00:37:21,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-10 00:37:21,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-10 00:37:22,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-10 00:37:22,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-10 00:37:22,662 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:37:22,701 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:37:22,702 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-03-10 00:37:22,702 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-10 00:37:22,704 [ scc.git] DEBUG Check current status 2026-03-10 00:37:22,704 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-10 00:37:22,706 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2026-03-10 00:37:22,706 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-10 00:37:22,745 [ scc.config] DEBUG Found remote.origin.url 2026-03-10 00:37:23,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2026-03-10 00:37:23,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-10 00:37:24,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-10 00:37:24,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-10 00:37:24,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-10 00:37:24,892 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:37:24,931 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:37:24,931 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-03-10 00:37:24,931 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-10 00:37:24,933 [ scc.git] DEBUG Check current status 2026-03-10 00:37:24,934 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-10 00:37:24,936 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-03-10 00:37:24,936 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-10 00:37:24,976 [ scc.config] DEBUG Found remote.origin.url 2026-03-10 00:37:25,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2026-03-10 00:37:25,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-10 00:37:26,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-10 00:37:26,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-10 00:37:27,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-10 00:37:27,121 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:37:27,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:37:27,161 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-03-10 00:37:27,161 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-10 00:37:27,163 [ scc.git] DEBUG Check current status 2026-03-10 00:37:27,163 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-10 00:37:27,165 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2026-03-10 00:37:27,165 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-10 00:37:27,204 [ scc.config] DEBUG Found remote.origin.url 2026-03-10 00:37:27,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2026-03-10 00:37:28,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-10 00:37:28,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-10 00:37:28,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-10 00:37:29,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-10 00:37:29,348 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:37:29,386 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:37:29,386 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-03-10 00:37:29,386 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-10 00:37:29,388 [ scc.git] DEBUG Check current status 2026-03-10 00:37:29,388 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-10 00:37:29,391 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2026-03-10 00:37:29,391 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-10 00:37:29,431 [ scc.config] DEBUG Found remote.origin.url 2026-03-10 00:37:29,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2026-03-10 00:37:30,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-10 00:37:30,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-10 00:37:31,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-10 00:37:31,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-10 00:37:31,565 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:37:31,604 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:37:31,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-03-10 00:37:31,605 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-10 00:37:31,607 [ scc.git] DEBUG Check current status 2026-03-10 00:37:31,607 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-10 00:37:31,609 [ scc.git] DEBUG fc9ff96 Bump version: 0.4.1 → 0.4.2.dev0 2026-03-10 00:37:31,609 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-10 00:37:31,649 [ scc.config] DEBUG Found remote.origin.url 2026-03-10 00:37:32,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2026-03-10 00:37:32,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-10 00:37:33,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-10 00:37:33,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-10 00:37:33,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-10 00:37:33,866 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:37:33,904 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:37:33,904 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-03-10 00:37:33,904 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-10 00:37:33,906 [ scc.git] DEBUG Check current status 2026-03-10 00:37:33,906 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-10 00:37:33,909 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2026-03-10 00:37:33,909 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-10 00:37:33,948 [ scc.config] DEBUG Found remote.origin.url 2026-03-10 00:37:34,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2026-03-10 00:37:34,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-10 00:37:35,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-10 00:37:35,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-10 00:37:36,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-10 00:37:36,326 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:37:36,365 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:37:36,366 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-03-10 00:37:36,366 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-10 00:37:36,368 [ scc.git] DEBUG Check current status 2026-03-10 00:37:36,368 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-10 00:37:36,371 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2026-03-10 00:37:36,371 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-10 00:37:36,411 [ scc.config] DEBUG Found remote.origin.url 2026-03-10 00:37:36,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-03-10 00:37:36,735 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-03-10 00:37:37,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2026-03-10 00:37:37,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-10 00:37:37,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-10 00:37:38,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-10 00:37:38,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-10 00:37:38,754 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:37:38,793 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:37:38,793 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-03-10 00:37:38,793 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-10 00:37:38,795 [ scc.git] DEBUG Check current status 2026-03-10 00:37:38,796 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-10 00:37:38,798 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2026-03-10 00:37:38,798 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-10 00:37:38,838 [ scc.config] DEBUG Found remote.origin.url 2026-03-10 00:37:39,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2026-03-10 00:37:39,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-10 00:37:40,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-10 00:37:40,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-10 00:37:41,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-10 00:37:41,053 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:37:41,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:37:41,093 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-03-10 00:37:41,093 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-10 00:37:41,095 [ scc.git] DEBUG Check current status 2026-03-10 00:37:41,095 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-10 00:37:41,097 [ scc.git] DEBUG 160d894 Fix display of code 2026-03-10 00:37:41,097 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-10 00:37:41,136 [ scc.config] DEBUG Found remote.origin.url 2026-03-10 00:37:41,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2026-03-10 00:37:42,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-10 00:37:42,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-10 00:37:42,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-10 00:37:43,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-10 00:37:43,354 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:37:43,393 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:37:43,394 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-03-10 00:37:43,394 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-10 00:37:43,396 [ scc.git] DEBUG Check current status 2026-03-10 00:37:43,396 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-10 00:37:43,398 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-03-10 00:37:43,398 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-10 00:37:43,437 [ scc.config] DEBUG Found remote.origin.url 2026-03-10 00:37:43,438 [ scc.git] DEBUG Repository configuration: base-branch: main 2026-03-10 00:37:43,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2026-03-10 00:37:44,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-10 00:37:44,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-10 00:37:45,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-10 00:37:45,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-10 00:37:45,535 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:37:45,573 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:37:45,573 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-03-10 00:37:45,573 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-10 00:37:45,575 [ scc.git] DEBUG Check current status 2026-03-10 00:37:45,575 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-10 00:37:45,578 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2026-03-10 00:37:45,578 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-10 00:37:45,616 [ scc.config] DEBUG Found remote.origin.url 2026-03-10 00:37:45,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-03-10 00:37:45,947 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-03-10 00:37:46,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2026-03-10 00:37:46,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-10 00:37:47,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-10 00:37:47,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-10 00:37:47,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-10 00:37:47,975 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:37:48,013 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:37:48,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-03-10 00:37:48,014 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-10 00:37:48,016 [ scc.git] DEBUG Check current status 2026-03-10 00:37:48,016 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-10 00:37:48,018 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2026-03-10 00:37:48,019 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-10 00:37:48,057 [ scc.config] DEBUG Found remote.origin.url 2026-03-10 00:37:48,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-03-10 00:37:48,396 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-03-10 00:37:48,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2026-03-10 00:37:49,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-10 00:37:49,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-10 00:37:49,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-10 00:37:50,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-10 00:37:50,382 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:37:50,420 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:37:50,420 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-03-10 00:37:50,421 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-10 00:37:50,423 [ scc.git] DEBUG Check current status 2026-03-10 00:37:50,423 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-10 00:37:50,425 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2026-03-10 00:37:50,425 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-10 00:37:50,463 [ scc.config] DEBUG Found remote.origin.url 2026-03-10 00:37:50,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2026-03-10 00:37:51,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-10 00:37:51,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-10 00:37:52,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-10 00:37:52,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-10 00:37:52,654 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:37:52,691 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:37:52,691 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-03-10 00:37:52,691 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-10 00:37:52,693 [ scc.git] DEBUG Check current status 2026-03-10 00:37:52,693 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-10 00:37:52,696 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0 2026-03-10 00:37:52,696 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-10 00:37:52,733 [ scc.config] DEBUG Found remote.origin.url 2026-03-10 00:37:52,734 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-03-10 00:37:53,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-03-10 00:37:53,095 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-03-10 00:37:53,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2026-03-10 00:37:53,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-10 00:37:54,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-10 00:37:54,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-10 00:37:55,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-10 00:37:55,091 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:37:55,128 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:37:55,128 [ scc.git] DEBUG Resetting... 2026-03-10 00:37:55,128 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-03-10 00:37:55,135 [ scc.git] DEBUG HEAD is now at 1972526 merge master -Dorg -Snone 2026-03-10 00:37:55,135 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-03-10 00:37:55,185 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2026-03-10 00:37:55,201 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2026-03-10 00:37:55,235 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-03-10 00:37:55,254 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-03-10 00:37:55,267 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2026-03-10 00:37:55,285 [ scc.git] DEBUG Submodule path 'omero-rois': checked out 'bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9' 2026-03-10 00:37:55,299 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2026-03-10 00:37:55,312 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2026-03-10 00:37:55,322 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2026-03-10 00:37:55,347 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-03-10 00:37:55,350 [ scc.git] DEBUG Check current status 2026-03-10 00:37:55,350 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-10 00:37:55,352 [ scc.git] DEBUG 1972526 merge master -Dorg -Snone 2026-03-10 00:37:55,352 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-10 00:37:55,394 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-03-10 00:37:55,396 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-03-10 00:37:55,399 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-03-10 00:37:55,402 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-03-10 00:37:55,406 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2026-03-10 00:37:55,408 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-03-10 00:37:55,411 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-03-10 00:37:55,414 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2026-03-10 00:37:55,417 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-03-10 00:37:55,419 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-03-10 00:37:55,422 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-03-10 00:37:55,424 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-03-10 00:37:55,428 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-03-10 00:37:55,430 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-03-10 00:37:55,433 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-03-10 00:37:55,436 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-03-10 00:37:55,438 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-03-10 00:37:55,441 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-03-10 00:37:55,443 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-03-10 00:37:55,446 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-03-10 00:37:55,448 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-03-10 00:37:55,452 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2026-03-10 00:37:55,452 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-03-10 00:37:55,452 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-03-10 00:37:55,452 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-03-10 00:37:55,452 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-03-10 00:37:55,452 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-03-10 00:37:55,452 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-03-10 00:37:55,453 [ scc.repo] DEBUG ## PRs found: 2026-03-10 00:37:55,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-03-10 00:37:56,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-03-10 00:37:56,301 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-10 00:37:56,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2026-03-10 00:37:57,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:37:58,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2026-03-10 00:37:58,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:37:58,465 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-03-10 00:37:58,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-03-10 00:37:58,981 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-10 00:37:59,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2026-03-10 00:37:59,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:38:00,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2026-03-10 00:38:01,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:38:01,001 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-03-10 00:38:01,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-03-10 00:38:01,533 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-10 00:38:02,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2026-03-10 00:38:02,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:38:03,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2026-03-10 00:38:03,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:38:03,562 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-03-10 00:38:03,563 [ scc.repo] DEBUG ## Branches found: 2026-03-10 00:38:03,563 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:38:03,563 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:38:03,565 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-10 00:38:03,567 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-10 00:38:03,567 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-10 00:38:03,570 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-10 00:38:03,573 [ scc.git] DEBUG Already up to date. 2026-03-10 00:38:03,573 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-03-10 00:38:03,951 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-10 00:38:03,951 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-03-10 00:38:03,955 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-03-10 00:38:04,336 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-10 00:38:04,337 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-03-10 00:38:04,341 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-03-10 00:38:04,704 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-10 00:38:04,704 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-03-10 00:38:04,708 [ scc.git] DEBUG ## Unique users: [] 2026-03-10 00:38:04,708 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:38:04,708 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:38:04,710 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-03-10 00:38:04,712 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:38:04,714 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-03-10 00:38:04,717 [ scc.git] DEBUG Already up to date. 2026-03-10 00:38:04,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:38:04,877 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-03-10 00:38:04,879 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:38:04,881 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-03-10 00:38:04,884 [ scc.git] DEBUG Already up to date. 2026-03-10 00:38:05,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:38:05,302 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-03-10 00:38:05,304 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:38:05,306 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-03-10 00:38:05,309 [ scc.git] DEBUG Already up to date. 2026-03-10 00:38:05,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:38:05,704 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-10 00:38:05,752 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:38:05,753 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:38:05,755 [ scc.repo] DEBUG ## PRs found: 2026-03-10 00:38:06,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2026-03-10 00:38:06,138 [ scc.repo] DEBUG ## Branches found: 2026-03-10 00:38:06,138 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-03-10 00:38:06,138 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:38:06,138 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:38:06,140 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-10 00:38:06,142 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-10 00:38:06,142 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-10 00:38:06,145 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-10 00:38:06,147 [ scc.git] DEBUG Already up to date. 2026-03-10 00:38:06,147 [ scc.git] DEBUG ## Unique users: [] 2026-03-10 00:38:06,147 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:38:06,148 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:38:06,150 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-10 00:38:06,187 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:38:06,187 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:38:06,189 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:38:06,227 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-10 00:38:06,230 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f880887d890> has no local changes 2026-03-10 00:38:06,230 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#84 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-03-10 00:38:06,235 [ scc.git] DEBUG [detached HEAD 180c004] merge master -Dorg -Ssuccess-only 2026-03-10 00:38:06,235 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:38:06,235 [ scc.repo] DEBUG ## PRs found: 2026-03-10 00:38:06,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2026-03-10 00:38:07,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2026-03-10 00:38:07,282 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-10 00:38:07,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2026-03-10 00:38:08,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:38:09,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:38:09,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2026-03-10 00:38:10,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:38:10,104 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-10 00:38:10,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2026-03-10 00:38:11,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2026-03-10 00:38:11,205 [ scc.repo] DEBUG ## Branches found: 2026-03-10 00:38:11,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-03-10 00:38:11,205 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:38:11,205 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:38:11,208 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-10 00:38:11,210 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-10 00:38:11,210 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-10 00:38:11,212 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-10 00:38:11,215 [ scc.git] DEBUG Already up to date. 2026-03-10 00:38:11,215 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2026-03-10 00:38:11,597 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2026-03-10 00:38:11,597 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2026-03-10 00:38:11,601 [ scc.git] DEBUG ## Unique users: [] 2026-03-10 00:38:11,601 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:38:11,602 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:38:11,604 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-03-10 00:38:11,606 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:38:11,609 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-03-10 00:38:11,615 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:38:11,618 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-10 00:38:11,618 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-10 00:38:11,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:38:11,761 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-10 00:38:11,798 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:38:11,798 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:38:11,800 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:38:11,835 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-10 00:38:11,838 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8808894b50> has no local changes 2026-03-10 00:38:11,838 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#84 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-03-10 00:38:11,843 [ scc.git] DEBUG [detached HEAD f0aa673] merge master -Dorg -Ssuccess-only 2026-03-10 00:38:11,844 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:38:11,844 [ scc.repo] DEBUG ## PRs found: 2026-03-10 00:38:12,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2026-03-10 00:38:12,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2026-03-10 00:38:13,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2026-03-10 00:38:13,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None 2026-03-10 00:38:14,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:38:14,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:38:15,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None 2026-03-10 00:38:15,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:38:15,735 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2026-03-10 00:38:16,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2026-03-10 00:38:16,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2026-03-10 00:38:16,692 [ scc.repo] DEBUG ## Branches found: 2026-03-10 00:38:16,692 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-03-10 00:38:16,692 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:38:16,692 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:38:16,694 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-10 00:38:16,697 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-10 00:38:16,697 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-10 00:38:16,700 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-10 00:38:16,707 [ scc.git] DEBUG Updating ce6e13c..68b7303 2026-03-10 00:38:17,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2026-03-10 00:38:18,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2026-03-10 00:38:18,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2026-03-10 00:38:19,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2026-03-10 00:38:19,563 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2026-03-10 00:38:20,053 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2026-03-10 00:38:20,054 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2026-03-10 00:38:20,057 [ scc.git] DEBUG ## Unique users: [] 2026-03-10 00:38:20,058 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:38:20,058 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:38:20,060 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-03-10 00:38:20,063 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:38:20,065 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-03-10 00:38:20,073 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2026-03-10 00:38:20,074 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:38:20,077 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2026-03-10 00:38:20,077 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2026-03-10 00:38:20,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:38:20,238 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-10 00:38:20,275 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:38:20,275 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:38:20,277 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:38:20,313 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-10 00:38:20,316 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f88088bd590> has no local changes 2026-03-10 00:38:20,316 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#84 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-03-10 00:38:20,322 [ scc.git] DEBUG [detached HEAD 6147814] merge master -Dorg -Ssuccess-only 2026-03-10 00:38:20,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:38:20,322 [ scc.repo] DEBUG ## PRs found: 2026-03-10 00:38:20,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2026-03-10 00:38:21,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/193 HTTP/1.1" 200 None 2026-03-10 00:38:21,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c HTTP/1.1" 200 None 2026-03-10 00:38:22,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:38:22,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:38:23,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c HTTP/1.1" 200 None 2026-03-10 00:38:23,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?per_page=1 HTTP/1.1" 200 None 2026-03-10 00:38:24,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c HTTP/1.1" 200 None 2026-03-10 00:38:24,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/status HTTP/1.1" 200 None 2026-03-10 00:38:24,647 [ scc.repo] DEBUG - PR 193 dominikl 'Only parse import uris if stated' 2026-03-10 00:38:25,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2026-03-10 00:38:25,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2026-03-10 00:38:26,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-03-10 00:38:26,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:38:27,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:38:27,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-03-10 00:38:27,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None 2026-03-10 00:38:28,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-03-10 00:38:28,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None 2026-03-10 00:38:28,931 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-03-10 00:38:29,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2026-03-10 00:38:29,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2026-03-10 00:38:30,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2026-03-10 00:38:30,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2026-03-10 00:38:31,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae HTTP/1.1" 200 None 2026-03-10 00:38:31,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:38:32,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:38:32,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae HTTP/1.1" 200 None 2026-03-10 00:38:33,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f99a6a6869bf6259376adaea157f24955c9aa3ae?per_page=1 HTTP/1.1" 200 None 2026-03-10 00:38:33,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae HTTP/1.1" 200 None 2026-03-10 00:38:34,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/status HTTP/1.1" 200 None 2026-03-10 00:38:34,244 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-03-10 00:38:34,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2026-03-10 00:38:35,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2026-03-10 00:38:35,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-03-10 00:38:36,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:38:36,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:38:37,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-03-10 00:38:37,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2026-03-10 00:38:38,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-03-10 00:38:38,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2026-03-10 00:38:38,745 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2026-03-10 00:38:39,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2026-03-10 00:38:39,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2026-03-10 00:38:40,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2026-03-10 00:38:40,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2026-03-10 00:38:41,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2026-03-10 00:38:42,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2026-03-10 00:38:42,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2026-03-10 00:38:42,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2026-03-10 00:38:42,979 [ scc.repo] DEBUG ## Branches found: 2026-03-10 00:38:42,979 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-03-10 00:38:42,979 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:38:42,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:38:42,982 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-10 00:38:42,984 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-10 00:38:42,984 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-10 00:38:42,988 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-10 00:38:43,000 [ scc.git] DEBUG Updating 11d3587..9f844b8 2026-03-10 00:38:43,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/172 HTTP/1.1" 200 None 2026-03-10 00:38:44,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/192 HTTP/1.1" 200 None 2026-03-10 00:38:45,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/186 HTTP/1.1" 200 None 2026-03-10 00:38:45,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/187 HTTP/1.1" 200 None 2026-03-10 00:38:46,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2026-03-10 00:38:47,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2026-03-10 00:38:48,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2026-03-10 00:38:48,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2026-03-10 00:38:49,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2026-03-10 00:38:50,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2026-03-10 00:38:50,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2026-03-10 00:38:51,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2026-03-10 00:38:51,737 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2026-03-10 00:38:52,155 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-03-10 00:38:52,155 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2026-03-10 00:38:52,159 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2026-03-10 00:38:52,423 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-03-10 00:38:52,424 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2026-03-10 00:38:52,427 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2026-03-10 00:38:52,686 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-03-10 00:38:52,686 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2026-03-10 00:38:52,690 [ scc.git] DEBUG Calling 'git fetch origin pull/193/head' 2026-03-10 00:38:52,953 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-03-10 00:38:52,953 [ scc.git] DEBUG * branch refs/pull/193/head -> FETCH_HEAD 2026-03-10 00:38:52,957 [ scc.git] DEBUG ## Unique users: [] 2026-03-10 00:38:52,957 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:38:52,957 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:38:52,959 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-03-10 00:38:52,963 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:38:52,965 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-03-10 00:38:52,977 [ scc.git] DEBUG Auto-merging README.rst 2026-03-10 00:38:52,977 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-03-10 00:38:52,977 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py 2026-03-10 00:38:52,977 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-03-10 00:38:52,977 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-03-10 00:38:52,977 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2026-03-10 00:38:52,977 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2026-03-10 00:38:52,977 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2026-03-10 00:38:52,977 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py 2026-03-10 00:38:52,977 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-03-10 00:38:52,977 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-03-10 00:38:52,977 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-10 00:38:52,978 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-10 00:38:52,980 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-10 00:38:52,984 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-03-10 00:38:53,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:38:53,123 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-03-10 00:38:53,126 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-10 00:38:53,129 [ scc.git] INFO - PR 174 will-moore 'Skip wells' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/cli.py - src/omero_zarr/masks.py - test/integration/clitest/test_export.py - src/omero_zarr/util.py - src/omero_zarr/raw_pixels.py --conflicts 2026-03-10 00:38:53,131 [ scc.config] DEBUG Found github.token 2026-03-10 00:38:53,131 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts. 2026-03-10 00:38:53,131 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-03-10 00:38:53,134 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:38:53,137 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-03-10 00:38:53,145 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-03-10 00:38:53,146 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-03-10 00:38:53,146 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-03-10 00:38:53,146 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-03-10 00:38:53,146 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-10 00:38:53,146 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-10 00:38:53,148 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-10 00:38:53,152 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-03-10 00:38:53,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:38:53,524 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-03-10 00:38:53,527 [ scc.git] DEBUG Calling 'git diff --name-only 9530c10ba9823fcba6b39139987bf4bcd4a60179..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-10 00:38:53,530 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - PR #174 will-moore 'Skip wells' - src/omero_zarr/masks.py - test/integration/clitest/test_export.py - Upstream changes - src/omero_zarr/masks.py - test/integration/clitest/test_export.py --conflicts 2026-03-10 00:38:53,532 [ scc.config] DEBUG Found github.token 2026-03-10 00:38:53,532 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2026-03-10 00:38:53,532 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-03-10 00:38:53,536 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:38:53,538 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-03-10 00:38:53,547 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-03-10 00:38:53,547 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-03-10 00:38:53,547 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2026-03-10 00:38:53,547 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_import.py 2026-03-10 00:38:53,548 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_import.py 2026-03-10 00:38:53,548 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-10 00:38:53,548 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-10 00:38:53,551 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-10 00:38:53,555 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-03-10 00:38:53,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:38:53,923 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-03-10 00:38:53,927 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-10 00:38:53,929 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - Upstream changes - test/integration/clitest/test_import.py - src/omero_zarr/zarr_import.py --conflicts 2026-03-10 00:38:53,931 [ scc.config] DEBUG Found github.token 2026-03-10 00:38:53,931 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2026-03-10 00:38:53,931 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-03-10 00:38:53,934 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:38:53,936 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 193 (Only parse import uris if stated) bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-03-10 00:38:53,943 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:38:53,946 [ scc.git] DEBUG src/omero_zarr/cli.py | 8 ++++++++ 2026-03-10 00:38:53,946 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 40 +++++++++++++++++++++------------------- 2026-03-10 00:38:53,946 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 19 deletions(-) 2026-03-10 00:38:54,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:38:54,354 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-10 00:38:54,391 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:38:54,391 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:38:54,393 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:38:54,429 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-10 00:38:54,432 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f88088c0110> has no local changes 2026-03-10 00:38:54,433 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#84 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-03-10 00:38:54,438 [ scc.git] DEBUG [detached HEAD bdc6b4c] merge master -Dorg -Ssuccess-only 2026-03-10 00:38:54,439 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:38:54,439 [ scc.repo] DEBUG ## PRs found: 2026-03-10 00:38:54,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2026-03-10 00:38:55,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/669 HTTP/1.1" 200 None 2026-03-10 00:38:55,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/666 HTTP/1.1" 200 None 2026-03-10 00:38:56,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/666/comments HTTP/1.1" 200 None 2026-03-10 00:38:56,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/870a04c282c68091e2e59c8bc04247f7419d05e4 HTTP/1.1" 200 None 2026-03-10 00:38:57,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/870a04c282c68091e2e59c8bc04247f7419d05e4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:38:57,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/870a04c282c68091e2e59c8bc04247f7419d05e4 HTTP/1.1" 200 None 2026-03-10 00:38:58,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/870a04c282c68091e2e59c8bc04247f7419d05e4?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:38:58,392 [ scc.repo] DEBUG - PR 666 will-moore 'Standalone app' 2026-03-10 00:38:58,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/663 HTTP/1.1" 200 None 2026-03-10 00:38:59,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/663/comments HTTP/1.1" 200 None 2026-03-10 00:38:59,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2f986f52ea19f9209b6a83450286bc9f5dac72bb HTTP/1.1" 200 None 2026-03-10 00:39:00,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2f986f52ea19f9209b6a83450286bc9f5dac72bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:39:01,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2f986f52ea19f9209b6a83450286bc9f5dac72bb/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:39:01,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2f986f52ea19f9209b6a83450286bc9f5dac72bb HTTP/1.1" 200 None 2026-03-10 00:39:02,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/2f986f52ea19f9209b6a83450286bc9f5dac72bb?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:39:02,039 [ scc.repo] DEBUG - PR 663 will-moore 'Zarr' 2026-03-10 00:39:02,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/662 HTTP/1.1" 200 None 2026-03-10 00:39:03,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/662/comments HTTP/1.1" 200 None 2026-03-10 00:39:03,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cfaed4dabe5ddc7f27de211c1a2630942a55a775 HTTP/1.1" 200 None 2026-03-10 00:39:04,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cfaed4dabe5ddc7f27de211c1a2630942a55a775/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:39:04,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cfaed4dabe5ddc7f27de211c1a2630942a55a775/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:39:05,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cfaed4dabe5ddc7f27de211c1a2630942a55a775 HTTP/1.1" 200 None 2026-03-10 00:39:05,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/cfaed4dabe5ddc7f27de211c1a2630942a55a775?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:39:05,587 [ scc.repo] DEBUG - PR 662 will-moore 'Export script handles OME-zarr images' 2026-03-10 00:39:06,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None 2026-03-10 00:39:06,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652/comments HTTP/1.1" 200 None 2026-03-10 00:39:06,558 [ scc.repo] DEBUG # ... Include label: include 2026-03-10 00:39:07,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None 2026-03-10 00:39:07,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:39:08,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:39:08,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None 2026-03-10 00:39:09,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:39:09,017 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-03-10 00:39:09,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2026-03-10 00:39:10,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2026-03-10 00:39:10,002 [ scc.repo] DEBUG ## Branches found: 2026-03-10 00:39:10,002 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-03-10 00:39:10,003 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:39:10,003 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:39:10,005 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-10 00:39:10,008 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-10 00:39:10,008 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-10 00:39:10,013 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-10 00:39:10,053 [ scc.git] DEBUG Updating 9cc36cde..acada9be 2026-03-10 00:39:10,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/674 HTTP/1.1" 200 None 2026-03-10 00:39:11,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/675 HTTP/1.1" 200 None 2026-03-10 00:39:11,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/671 HTTP/1.1" 200 None 2026-03-10 00:39:12,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/672 HTTP/1.1" 200 None 2026-03-10 00:39:13,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/667 HTTP/1.1" 200 None 2026-03-10 00:39:14,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/665 HTTP/1.1" 200 None 2026-03-10 00:39:14,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/656 HTTP/1.1" 200 None 2026-03-10 00:39:15,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/670 HTTP/1.1" 200 None 2026-03-10 00:39:16,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/664 HTTP/1.1" 200 None 2026-03-10 00:39:17,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/654 HTTP/1.1" 200 None 2026-03-10 00:39:17,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/648 HTTP/1.1" 200 None 2026-03-10 00:39:18,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/661 HTTP/1.1" 200 None 2026-03-10 00:39:19,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None 2026-03-10 00:39:20,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None 2026-03-10 00:39:20,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None 2026-03-10 00:39:21,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None 2026-03-10 00:39:22,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2026-03-10 00:39:22,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2026-03-10 00:39:23,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2026-03-10 00:39:24,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2026-03-10 00:39:24,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2026-03-10 00:39:25,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2026-03-10 00:39:26,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2026-03-10 00:39:26,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2026-03-10 00:39:27,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2026-03-10 00:39:28,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2026-03-10 00:39:29,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2026-03-10 00:39:29,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2026-03-10 00:39:30,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2026-03-10 00:39:31,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2026-03-10 00:39:31,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2026-03-10 00:39:32,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2026-03-10 00:39:32,646 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head' 2026-03-10 00:39:32,935 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-03-10 00:39:32,936 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD 2026-03-10 00:39:32,939 [ scc.git] DEBUG Calling 'git fetch origin pull/662/head' 2026-03-10 00:39:33,199 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-03-10 00:39:33,199 [ scc.git] DEBUG * branch refs/pull/662/head -> FETCH_HEAD 2026-03-10 00:39:33,203 [ scc.git] DEBUG Calling 'git fetch origin pull/663/head' 2026-03-10 00:39:33,705 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-03-10 00:39:33,705 [ scc.git] DEBUG * branch refs/pull/663/head -> FETCH_HEAD 2026-03-10 00:39:33,709 [ scc.git] DEBUG Calling 'git fetch origin pull/666/head' 2026-03-10 00:39:33,975 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-03-10 00:39:33,975 [ scc.git] DEBUG * branch refs/pull/666/head -> FETCH_HEAD 2026-03-10 00:39:33,978 [ scc.git] DEBUG ## Unique users: [] 2026-03-10 00:39:33,978 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:39:33,978 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:39:33,981 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-03-10 00:39:33,989 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:39:33,992 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-03-10 00:39:34,021 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-03-10 00:39:34,021 [ scc.git] DEBUG Auto-merging src/index.html 2026-03-10 00:39:34,021 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-03-10 00:39:34,022 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:39:34,028 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++- 2026-03-10 00:39:34,028 [ scc.git] DEBUG src/index.html | 11 ++ 2026-03-10 00:39:34,028 [ scc.git] DEBUG src/js/views/figure_view.js | 1 + 2026-03-10 00:39:34,028 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-) 2026-03-10 00:39:34,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:39:34,328 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cfaed4dabe5ddc7f27de211c1a2630942a55a775' 2026-03-10 00:39:34,334 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:39:34,336 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 662 (Export script handles OME-zarr images) cfaed4dabe5ddc7f27de211c1a2630942a55a775' 2026-03-10 00:39:34,355 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-03-10 00:39:34,356 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:39:34,361 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 435 +++++++++++++++------ 2026-03-10 00:39:34,361 [ scc.git] DEBUG 1 file changed, 319 insertions(+), 116 deletions(-) 2026-03-10 00:39:34,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:39:34,734 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2f986f52ea19f9209b6a83450286bc9f5dac72bb' 2026-03-10 00:39:34,740 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:39:34,742 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 663 (Zarr) 2f986f52ea19f9209b6a83450286bc9f5dac72bb' 2026-03-10 00:39:34,761 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-10 00:39:34,761 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-03-10 00:39:34,761 [ scc.git] DEBUG Auto-merging package.json 2026-03-10 00:39:34,761 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package.json 2026-03-10 00:39:34,761 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-10 00:39:34,762 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-10 00:39:34,767 [ scc.git] DEBUG Calling 'git reset --hard 855cf4d44574fc0c0e1b8476957ddaa662a81300' 2026-03-10 00:39:34,778 [ scc.git] DEBUG HEAD is now at 855cf4d4 merge master -Dorg -Ssuccess-only: PR 662 (Export script handles OME-zarr images) 2026-03-10 00:39:35,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:39:35,129 [ scc.git] DEBUG Calling 'git merge-base acada9be0cc8759f88dbfd89e8f1f7d69955749c 2f986f52ea19f9209b6a83450286bc9f5dac72bb' 2026-03-10 00:39:35,134 [ scc.git] DEBUG Calling 'git diff --name-only 186921eab53e6bdfe6df0720213e1c3759898cf9..acada9be0cc8759f88dbfd89e8f1f7d69955749c' 2026-03-10 00:39:35,137 [ scc.git] INFO - PR 663 will-moore 'Zarr' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - Upstream changes - package.json - package-lock.json --conflicts 2026-03-10 00:39:35,139 [ scc.config] DEBUG Found github.token 2026-03-10 00:39:35,139 [ scc.git] DEBUG Not adding comment to issue #663, already --conflicts. 2026-03-10 00:39:35,139 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...870a04c282c68091e2e59c8bc04247f7419d05e4' 2026-03-10 00:39:35,145 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:39:35,147 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 666 (Standalone app) 870a04c282c68091e2e59c8bc04247f7419d05e4' 2026-03-10 00:39:35,181 [ scc.git] DEBUG Auto-merging omero_figure/views.py 2026-03-10 00:39:35,181 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-10 00:39:35,181 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-03-10 00:39:35,181 [ scc.git] DEBUG Auto-merging package.json 2026-03-10 00:39:35,181 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package.json 2026-03-10 00:39:35,181 [ scc.git] DEBUG Auto-merging src/css/figure.css 2026-03-10 00:39:35,181 [ scc.git] DEBUG Auto-merging src/index.html 2026-03-10 00:39:35,181 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2026-03-10 00:39:35,181 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/models/figure_model.js 2026-03-10 00:39:35,181 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2026-03-10 00:39:35,181 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/models/panel_model.js 2026-03-10 00:39:35,181 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-03-10 00:39:35,181 [ scc.git] DEBUG Auto-merging src/js/views/modal_views.js 2026-03-10 00:39:35,181 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2026-03-10 00:39:35,181 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2026-03-10 00:39:35,181 [ scc.git] DEBUG Auto-merging src/js/views/util.js 2026-03-10 00:39:35,181 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/util.js 2026-03-10 00:39:35,181 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-10 00:39:35,181 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-10 00:39:35,186 [ scc.git] DEBUG Calling 'git reset --hard 855cf4d44574fc0c0e1b8476957ddaa662a81300' 2026-03-10 00:39:35,197 [ scc.git] DEBUG HEAD is now at 855cf4d4 merge master -Dorg -Ssuccess-only: PR 662 (Export script handles OME-zarr images) 2026-03-10 00:39:35,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:39:35,553 [ scc.git] DEBUG Calling 'git merge-base acada9be0cc8759f88dbfd89e8f1f7d69955749c 870a04c282c68091e2e59c8bc04247f7419d05e4' 2026-03-10 00:39:35,559 [ scc.git] DEBUG Calling 'git diff --name-only b79d638b95385463319f73afc484cf4a1ee3ba13..acada9be0cc8759f88dbfd89e8f1f7d69955749c' 2026-03-10 00:39:35,562 [ scc.git] INFO - PR 666 will-moore 'Standalone app' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - PR #663 will-moore 'Zarr' - package.json - src/js/models/figure_model.js - src/js/models/panel_model.js - package-lock.json - src/js/views/util.js - Upstream changes - package.json - src/js/models/figure_model.js - src/js/models/panel_model.js - package-lock.json - src/js/views/util.js --conflicts 2026-03-10 00:39:35,564 [ scc.config] DEBUG Found github.token 2026-03-10 00:39:35,565 [ scc.git] DEBUG Not adding comment to issue #666, already --conflicts. 2026-03-10 00:39:35,565 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-10 00:39:35,602 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:39:35,602 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:39:35,604 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:39:35,640 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-10 00:39:35,646 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8808835a10> has no local changes 2026-03-10 00:39:35,647 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 669 will-moore 'Standalone python script' (stage: draft) - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) Updating 9cc36cde..acada9be Previously merged: - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 662 will-moore 'Export script handles OME-zarr images' Conflicting PRs (not included): - PR 663 will-moore 'Zarr' - PR 666 will-moore 'Standalone app' Generated by OMERO-plugins-push#84 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-03-10 00:39:35,657 [ scc.git] DEBUG [detached HEAD aedc5d78] merge master -Dorg -Ssuccess-only 2026-03-10 00:39:35,657 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:39:35,657 [ scc.repo] DEBUG ## PRs found: 2026-03-10 00:39:36,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2026-03-10 00:39:36,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2026-03-10 00:39:36,563 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-10 00:39:37,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2026-03-10 00:39:37,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:39:38,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:39:39,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2026-03-10 00:39:39,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:39:39,431 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-10 00:39:39,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2026-03-10 00:39:40,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2026-03-10 00:39:40,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2026-03-10 00:39:41,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:39:41,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2026-03-10 00:39:42,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:39:42,320 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2026-03-10 00:39:42,320 [ scc.repo] DEBUG ## Branches found: 2026-03-10 00:39:42,321 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-03-10 00:39:42,321 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:39:42,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:39:42,323 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-10 00:39:42,326 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-10 00:39:42,326 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-10 00:39:42,328 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-10 00:39:42,331 [ scc.git] DEBUG Already up to date. 2026-03-10 00:39:42,331 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2026-03-10 00:39:42,597 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-03-10 00:39:42,597 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2026-03-10 00:39:42,601 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2026-03-10 00:39:42,868 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-03-10 00:39:42,868 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2026-03-10 00:39:42,871 [ scc.git] DEBUG ## Unique users: [] 2026-03-10 00:39:42,872 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:39:42,872 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:39:42,874 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-03-10 00:39:42,877 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:39:42,879 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-03-10 00:39:42,885 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2026-03-10 00:39:42,886 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:39:42,888 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2026-03-10 00:39:42,888 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2026-03-10 00:39:43,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:39:43,035 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-03-10 00:39:43,038 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:39:43,040 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-03-10 00:39:43,047 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:39:43,049 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-10 00:39:43,049 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-10 00:39:43,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:39:43,430 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-10 00:39:43,467 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:39:43,467 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:39:43,469 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:39:43,505 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-10 00:39:43,508 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f88076fd6d0> has no local changes 2026-03-10 00:39:43,508 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#84 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-03-10 00:39:43,514 [ scc.git] DEBUG [detached HEAD 7143a7e] merge master -Dorg -Ssuccess-only 2026-03-10 00:39:43,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:39:43,514 [ scc.repo] DEBUG ## PRs found: 2026-03-10 00:39:43,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2026-03-10 00:39:44,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2026-03-10 00:39:45,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2026-03-10 00:39:45,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2026-03-10 00:39:45,471 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-10 00:39:46,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2026-03-10 00:39:46,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:39:47,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:39:47,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2026-03-10 00:39:47,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:39:47,898 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-03-10 00:39:48,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2026-03-10 00:39:48,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2026-03-10 00:39:49,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2026-03-10 00:39:49,354 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-10 00:39:49,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2026-03-10 00:39:50,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:39:51,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2026-03-10 00:39:51,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:39:51,442 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-03-10 00:39:51,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2026-03-10 00:39:51,934 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-10 00:39:52,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2026-03-10 00:39:52,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:39:53,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2026-03-10 00:39:53,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:39:53,824 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-03-10 00:39:54,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2026-03-10 00:39:54,306 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-10 00:39:54,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2026-03-10 00:39:55,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:39:55,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2026-03-10 00:39:56,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:39:56,198 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-03-10 00:39:56,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2026-03-10 00:39:57,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2026-03-10 00:39:57,181 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-10 00:39:57,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2026-03-10 00:39:58,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:39:58,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2026-03-10 00:39:59,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:39:59,247 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-03-10 00:39:59,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2026-03-10 00:39:59,743 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-10 00:40:00,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2026-03-10 00:40:00,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:40:01,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2026-03-10 00:40:01,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:40:01,671 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-03-10 00:40:02,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2026-03-10 00:40:02,153 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-10 00:40:02,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2026-03-10 00:40:03,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:40:03,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2026-03-10 00:40:04,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:40:04,135 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-03-10 00:40:04,135 [ scc.repo] DEBUG ## Branches found: 2026-03-10 00:40:04,135 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-03-10 00:40:04,135 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:40:04,135 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:40:04,138 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-10 00:40:04,140 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-10 00:40:04,140 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-10 00:40:04,143 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-10 00:40:04,146 [ scc.git] DEBUG Already up to date. 2026-03-10 00:40:04,146 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2026-03-10 00:40:04,413 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-10 00:40:04,413 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2026-03-10 00:40:04,417 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2026-03-10 00:40:04,939 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-10 00:40:04,939 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2026-03-10 00:40:04,943 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2026-03-10 00:40:05,201 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-10 00:40:05,201 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2026-03-10 00:40:05,206 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2026-03-10 00:40:05,458 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-10 00:40:05,458 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2026-03-10 00:40:05,461 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2026-03-10 00:40:05,737 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-10 00:40:05,737 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2026-03-10 00:40:05,740 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2026-03-10 00:40:06,092 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-10 00:40:06,093 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2026-03-10 00:40:06,097 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2026-03-10 00:40:06,348 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-10 00:40:06,348 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2026-03-10 00:40:06,352 [ scc.git] DEBUG ## Unique users: [] 2026-03-10 00:40:06,353 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:40:06,353 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:40:06,355 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-03-10 00:40:06,357 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:40:06,360 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-03-10 00:40:06,367 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:40:06,371 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-03-10 00:40:06,372 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-03-10 00:40:06,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:40:06,528 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-03-10 00:40:06,531 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:40:06,533 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-03-10 00:40:06,547 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-10 00:40:06,548 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:40:06,552 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2026-03-10 00:40:06,552 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2026-03-10 00:40:06,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:40:06,924 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-03-10 00:40:06,926 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:40:06,928 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-03-10 00:40:06,943 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-10 00:40:06,944 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-03-10 00:40:06,944 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-10 00:40:06,944 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-10 00:40:06,946 [ scc.git] DEBUG Calling 'git reset --hard f0ed4be664af98567a70227c728aeaab3ad87c12' 2026-03-10 00:40:06,951 [ scc.git] DEBUG HEAD is now at f0ed4be merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2026-03-10 00:40:07,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:40:07,313 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-03-10 00:40:07,316 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-03-10 00:40:07,319 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2026-03-10 00:40:07,321 [ scc.config] DEBUG Found github.token 2026-03-10 00:40:07,321 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2026-03-10 00:40:07,321 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-03-10 00:40:07,323 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:40:07,326 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-03-10 00:40:07,340 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-10 00:40:07,341 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:40:07,345 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2026-03-10 00:40:07,345 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2026-03-10 00:40:07,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:40:07,735 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-03-10 00:40:07,738 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:40:07,740 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-03-10 00:40:07,755 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-10 00:40:07,755 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:40:07,760 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-03-10 00:40:07,760 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-03-10 00:40:08,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:40:08,125 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-03-10 00:40:08,128 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:40:08,130 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-03-10 00:40:08,144 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-10 00:40:08,144 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-03-10 00:40:08,144 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-10 00:40:08,144 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-10 00:40:08,147 [ scc.git] DEBUG Calling 'git reset --hard 18069bf2b6145903ca220021a0e261286c0a2d3f' 2026-03-10 00:40:08,152 [ scc.git] DEBUG HEAD is now at 18069bf merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-03-10 00:40:08,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:40:08,536 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-03-10 00:40:08,538 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-03-10 00:40:08,541 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2026-03-10 00:40:08,543 [ scc.config] DEBUG Found github.token 2026-03-10 00:40:08,543 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2026-03-10 00:40:08,543 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-03-10 00:40:08,545 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:40:08,548 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-03-10 00:40:08,565 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-10 00:40:08,565 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-03-10 00:40:08,566 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-10 00:40:08,566 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-10 00:40:08,568 [ scc.git] DEBUG Calling 'git reset --hard 18069bf2b6145903ca220021a0e261286c0a2d3f' 2026-03-10 00:40:08,573 [ scc.git] DEBUG HEAD is now at 18069bf merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-03-10 00:40:08,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:40:08,941 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-03-10 00:40:08,944 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-03-10 00:40:08,946 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2026-03-10 00:40:08,948 [ scc.config] DEBUG Found github.token 2026-03-10 00:40:08,948 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2026-03-10 00:40:08,948 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-10 00:40:08,985 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:40:08,985 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:40:08,987 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:40:09,023 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-10 00:40:09,027 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f88088dc290> has no local changes 2026-03-10 00:40:09,027 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#84 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-03-10 00:40:09,032 [ scc.git] DEBUG [detached HEAD eae51f5] merge master -Dorg -Ssuccess-only 2026-03-10 00:40:09,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:40:09,033 [ scc.repo] DEBUG ## PRs found: 2026-03-10 00:40:09,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2026-03-10 00:40:10,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/514 HTTP/1.1" 200 None 2026-03-10 00:40:10,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f29e3950325423129b309fdefc7851ee0dd46e26 HTTP/1.1" 200 None 2026-03-10 00:40:11,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f29e3950325423129b309fdefc7851ee0dd46e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:40:11,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f29e3950325423129b309fdefc7851ee0dd46e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:40:12,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f29e3950325423129b309fdefc7851ee0dd46e26 HTTP/1.1" 200 None 2026-03-10 00:40:12,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/f29e3950325423129b309fdefc7851ee0dd46e26?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:40:12,680 [ scc.repo] DEBUG - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' 2026-03-10 00:40:13,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/513 HTTP/1.1" 200 None 2026-03-10 00:40:13,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None 2026-03-10 00:40:14,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:40:14,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:40:15,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None 2026-03-10 00:40:15,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/aebb6273b9267a47a47363208fa97dc9c638a688?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:40:15,745 [ scc.repo] DEBUG - PR 513 jburel 'Bump Python version' 2026-03-10 00:40:16,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/512 HTTP/1.1" 200 None 2026-03-10 00:40:16,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None 2026-03-10 00:40:17,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:40:17,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:40:18,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None 2026-03-10 00:40:18,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/ec8f9e716c574a715529da53dff61ef178020c43?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:40:18,697 [ scc.repo] DEBUG - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-03-10 00:40:19,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511 HTTP/1.1" 200 None 2026-03-10 00:40:19,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None 2026-03-10 00:40:20,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2026-03-10 00:40:20,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2026-03-10 00:40:21,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2026-03-10 00:40:21,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2026-03-10 00:40:22,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2026-03-10 00:40:22,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2026-03-10 00:40:23,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2026-03-10 00:40:23,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:40:24,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2026-03-10 00:40:24,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:40:24,593 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2026-03-10 00:40:25,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2026-03-10 00:40:25,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2026-03-10 00:40:26,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2026-03-10 00:40:26,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:40:27,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2026-03-10 00:40:27,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:40:27,604 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2026-03-10 00:40:28,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2026-03-10 00:40:28,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2026-03-10 00:40:29,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2026-03-10 00:40:29,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:40:30,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2026-03-10 00:40:30,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:40:30,523 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2026-03-10 00:40:31,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2026-03-10 00:40:31,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2026-03-10 00:40:32,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None 2026-03-10 00:40:32,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:40:33,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:40:33,157 [ scc.repo] DEBUG ## Branches found: 2026-03-10 00:40:33,157 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-03-10 00:40:33,157 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:40:33,157 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:40:33,159 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-10 00:40:33,162 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-10 00:40:33,162 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-10 00:40:33,164 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-10 00:40:33,171 [ scc.git] DEBUG Updating 7a798ce..5e2de43 2026-03-10 00:40:33,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2026-03-10 00:40:34,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2026-03-10 00:40:34,650 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2026-03-10 00:40:34,941 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-10 00:40:34,941 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2026-03-10 00:40:34,945 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2026-03-10 00:40:35,360 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-10 00:40:35,360 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2026-03-10 00:40:35,364 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2026-03-10 00:40:35,622 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-10 00:40:35,622 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2026-03-10 00:40:35,626 [ scc.git] DEBUG Calling 'git fetch origin pull/512/head' 2026-03-10 00:40:35,883 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-10 00:40:35,883 [ scc.git] DEBUG * branch refs/pull/512/head -> FETCH_HEAD 2026-03-10 00:40:35,887 [ scc.git] DEBUG Calling 'git fetch origin pull/513/head' 2026-03-10 00:40:36,145 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-10 00:40:36,145 [ scc.git] DEBUG * branch refs/pull/513/head -> FETCH_HEAD 2026-03-10 00:40:36,149 [ scc.git] DEBUG Calling 'git fetch origin pull/514/head' 2026-03-10 00:40:36,523 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-10 00:40:36,523 [ scc.git] DEBUG * branch refs/pull/514/head -> FETCH_HEAD 2026-03-10 00:40:36,526 [ scc.git] DEBUG ## Unique users: [] 2026-03-10 00:40:36,526 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:40:36,527 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:40:36,529 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-03-10 00:40:36,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:40:36,534 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-03-10 00:40:36,544 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2026-03-10 00:40:36,544 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2026-03-10 00:40:36,545 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:40:36,549 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2026-03-10 00:40:36,549 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2026-03-10 00:40:36,549 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2026-03-10 00:40:36,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:40:36,695 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2026-03-10 00:40:36,699 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:40:36,701 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2026-03-10 00:40:36,715 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2026-03-10 00:40:36,715 [ scc.git] DEBUG Auto-merging src/app/context.js 2026-03-10 00:40:36,715 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2026-03-10 00:40:36,715 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2026-03-10 00:40:36,716 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:40:36,720 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2026-03-10 00:40:36,720 [ scc.git] DEBUG src/app/context.js | 6 +- 2026-03-10 00:40:36,720 [ scc.git] DEBUG src/app/header.html | 5 + 2026-03-10 00:40:36,720 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2026-03-10 00:40:36,720 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2026-03-10 00:40:36,720 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2026-03-10 00:40:36,720 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2026-03-10 00:40:36,720 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2026-03-10 00:40:37,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:40:37,102 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2026-03-10 00:40:37,106 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:40:37,108 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2026-03-10 00:40:37,118 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2026-03-10 00:40:37,118 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:40:37,121 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2026-03-10 00:40:37,121 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2026-03-10 00:40:37,121 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2026-03-10 00:40:37,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:40:37,500 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ec8f9e716c574a715529da53dff61ef178020c43' 2026-03-10 00:40:37,504 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:40:37,506 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 512 (Replace manual changelog by automated GH release step) ec8f9e716c574a715529da53dff61ef178020c43' 2026-03-10 00:40:37,515 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:40:37,518 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 5 + 2026-03-10 00:40:37,518 [ scc.git] DEBUG CHANGELOG.md | 261 ------------------------------------- 2026-03-10 00:40:37,518 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 261 deletions(-) 2026-03-10 00:40:37,518 [ scc.git] DEBUG delete mode 100644 CHANGELOG.md 2026-03-10 00:40:37,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:40:37,894 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aebb6273b9267a47a47363208fa97dc9c638a688' 2026-03-10 00:40:37,898 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:40:37,900 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 513 (Bump Python version) aebb6273b9267a47a47363208fa97dc9c638a688' 2026-03-10 00:40:37,908 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-03-10 00:40:37,909 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:40:37,911 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 4 ++-- 2026-03-10 00:40:37,912 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2026-03-10 00:40:38,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:40:38,282 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f29e3950325423129b309fdefc7851ee0dd46e26' 2026-03-10 00:40:38,286 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:40:38,288 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 514 (Fix where interpolate_pixels server config is read from) f29e3950325423129b309fdefc7851ee0dd46e26' 2026-03-10 00:40:38,297 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2026-03-10 00:40:38,298 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:40:38,301 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 3 ++- 2026-03-10 00:40:38,301 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 1 deletion(-) 2026-03-10 00:40:38,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:40:38,697 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-10 00:40:38,734 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:40:38,734 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:40:38,736 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:40:38,772 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-10 00:40:38,776 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f88076ecfd0> has no local changes 2026-03-10 00:40:38,776 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..5e2de43 Previously merged: - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 513 jburel 'Bump Python version' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' Generated by OMERO-plugins-push#84 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-03-10 00:40:38,782 [ scc.git] DEBUG [detached HEAD fd1cee7] merge master -Dorg -Ssuccess-only 2026-03-10 00:40:38,783 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:40:38,783 [ scc.repo] DEBUG ## PRs found: 2026-03-10 00:40:39,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2026-03-10 00:40:39,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2026-03-10 00:40:40,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2026-03-10 00:40:40,184 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-10 00:40:40,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2026-03-10 00:40:41,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:40:41,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:40:42,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2026-03-10 00:40:42,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:40:42,914 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-10 00:40:43,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2026-03-10 00:40:43,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2026-03-10 00:40:44,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:40:44,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2026-03-10 00:40:45,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:40:45,315 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-10 00:40:45,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2026-03-10 00:40:46,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2026-03-10 00:40:46,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2026-03-10 00:40:47,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:40:47,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2026-03-10 00:40:48,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:40:48,247 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2026-03-10 00:40:48,248 [ scc.repo] DEBUG ## Branches found: 2026-03-10 00:40:48,248 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-03-10 00:40:48,248 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:40:48,248 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:40:48,251 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-10 00:40:48,253 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-10 00:40:48,253 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-10 00:40:48,256 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-10 00:40:48,258 [ scc.git] DEBUG Already up to date. 2026-03-10 00:40:48,258 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-03-10 00:40:48,654 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-03-10 00:40:48,654 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-03-10 00:40:48,657 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2026-03-10 00:40:49,027 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-03-10 00:40:49,027 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2026-03-10 00:40:49,031 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2026-03-10 00:40:49,294 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-03-10 00:40:49,294 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2026-03-10 00:40:49,298 [ scc.git] DEBUG ## Unique users: [] 2026-03-10 00:40:49,298 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:40:49,298 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:40:49,300 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-03-10 00:40:49,303 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:40:49,305 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-03-10 00:40:49,313 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:40:49,316 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2026-03-10 00:40:49,316 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2026-03-10 00:40:49,316 [ scc.git] DEBUG requirements.txt | 2 +- 2026-03-10 00:40:49,316 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2026-03-10 00:40:49,316 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2026-03-10 00:40:49,316 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2026-03-10 00:40:49,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:40:49,458 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-03-10 00:40:49,461 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:40:49,463 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-03-10 00:40:49,469 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:40:49,472 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-10 00:40:49,472 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-10 00:40:49,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:40:49,853 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-03-10 00:40:49,856 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:40:49,858 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-03-10 00:40:49,865 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-03-10 00:40:49,865 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-03-10 00:40:49,865 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-10 00:40:49,865 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-10 00:40:49,868 [ scc.git] DEBUG Calling 'git reset --hard 78b64e9f4c0f714c1a7dfe4b90059efdc3dec072' 2026-03-10 00:40:49,871 [ scc.git] DEBUG HEAD is now at 78b64e9 merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2026-03-10 00:40:50,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:40:50,254 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-03-10 00:40:50,256 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2026-03-10 00:40:50,259 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2026-03-10 00:40:50,261 [ scc.config] DEBUG Found github.token 2026-03-10 00:40:50,261 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2026-03-10 00:40:50,261 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-10 00:40:50,298 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:40:50,298 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:40:50,300 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:40:50,336 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-10 00:40:50,339 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f88077117d0> has no local changes 2026-03-10 00:40:50,339 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#84 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-03-10 00:40:50,345 [ scc.git] DEBUG [detached HEAD 8fd1904] merge master -Dorg -Ssuccess-only 2026-03-10 00:40:50,345 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:40:50,345 [ scc.repo] DEBUG ## PRs found: 2026-03-10 00:40:50,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2026-03-10 00:40:51,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None 2026-03-10 00:40:51,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None 2026-03-10 00:40:52,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f HTTP/1.1" 200 None 2026-03-10 00:40:52,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:40:53,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f HTTP/1.1" 200 None 2026-03-10 00:40:53,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:40:53,841 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-03-10 00:40:54,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2026-03-10 00:40:54,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2026-03-10 00:40:55,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2026-03-10 00:40:55,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:40:56,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2026-03-10 00:40:56,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:40:56,752 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-03-10 00:40:57,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2026-03-10 00:40:57,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2026-03-10 00:40:58,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2026-03-10 00:40:58,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:40:59,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2026-03-10 00:40:59,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:40:59,635 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-03-10 00:40:59,635 [ scc.repo] DEBUG ## Branches found: 2026-03-10 00:40:59,635 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-03-10 00:40:59,635 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:40:59,635 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:40:59,638 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-10 00:40:59,640 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-10 00:40:59,640 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-10 00:40:59,643 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-10 00:40:59,649 [ scc.git] DEBUG Updating 3cd120c..55060a2 2026-03-10 00:41:00,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2026-03-10 00:41:00,351 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2026-03-10 00:41:00,736 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-03-10 00:41:00,736 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2026-03-10 00:41:00,740 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2026-03-10 00:41:01,081 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-03-10 00:41:01,081 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2026-03-10 00:41:01,085 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head' 2026-03-10 00:41:01,544 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-03-10 00:41:01,544 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD 2026-03-10 00:41:01,547 [ scc.git] DEBUG ## Unique users: [] 2026-03-10 00:41:01,547 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:41:01,547 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:01,549 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-03-10 00:41:01,553 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:01,555 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-03-10 00:41:01,566 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2026-03-10 00:41:01,566 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2026-03-10 00:41:01,567 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-03-10 00:41:01,567 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-03-10 00:41:01,567 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-10 00:41:01,567 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-10 00:41:01,569 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-03-10 00:41:01,573 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-03-10 00:41:01,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:41:01,733 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-03-10 00:41:01,737 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2026-03-10 00:41:01,740 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2026-03-10 00:41:01,742 [ scc.config] DEBUG Found github.token 2026-03-10 00:41:01,742 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2026-03-10 00:41:01,742 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2026-03-10 00:41:01,746 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:01,748 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2026-03-10 00:41:01,763 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-03-10 00:41:01,763 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-03-10 00:41:01,763 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2026-03-10 00:41:01,763 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-10 00:41:01,763 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-10 00:41:01,766 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-03-10 00:41:01,771 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-03-10 00:41:02,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:41:02,132 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2026-03-10 00:41:02,136 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2026-03-10 00:41:02,138 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2026-03-10 00:41:02,140 [ scc.config] DEBUG Found github.token 2026-03-10 00:41:02,140 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2026-03-10 00:41:02,140 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-03-10 00:41:02,143 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:02,145 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-03-10 00:41:02,153 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:41:02,156 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++- 2026-03-10 00:41:02,156 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-) 2026-03-10 00:41:02,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:41:02,539 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-10 00:41:02,577 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:41:02,577 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:02,579 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:41:02,616 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-10 00:41:02,619 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f88088c59d0> has no local changes 2026-03-10 00:41:02,619 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#84 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-03-10 00:41:02,625 [ scc.git] DEBUG [detached HEAD f9d5750] merge master -Dorg -Ssuccess-only 2026-03-10 00:41:02,625 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:41:02,626 [ scc.repo] DEBUG ## PRs found: 2026-03-10 00:41:03,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2026-03-10 00:41:03,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2026-03-10 00:41:04,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2026-03-10 00:41:04,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:41:05,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:41:05,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2026-03-10 00:41:06,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:41:06,035 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-10 00:41:06,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2026-03-10 00:41:06,676 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-10 00:41:07,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2026-03-10 00:41:07,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:41:08,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:41:08,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2026-03-10 00:41:09,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:41:09,169 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-03-10 00:41:09,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2026-03-10 00:41:09,628 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-10 00:41:10,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2026-03-10 00:41:10,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:41:11,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:41:11,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2026-03-10 00:41:12,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:41:12,163 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-03-10 00:41:12,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2026-03-10 00:41:13,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2026-03-10 00:41:13,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2026-03-10 00:41:14,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2026-03-10 00:41:14,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2026-03-10 00:41:15,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2026-03-10 00:41:15,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2026-03-10 00:41:15,543 [ scc.repo] DEBUG ## Branches found: 2026-03-10 00:41:15,544 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-03-10 00:41:15,544 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:41:15,544 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:15,546 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-10 00:41:15,549 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-10 00:41:15,549 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-10 00:41:15,551 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-10 00:41:15,554 [ scc.git] DEBUG Already up to date. 2026-03-10 00:41:15,554 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2026-03-10 00:41:15,822 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-03-10 00:41:15,822 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2026-03-10 00:41:15,825 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2026-03-10 00:41:16,089 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-03-10 00:41:16,089 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2026-03-10 00:41:16,093 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2026-03-10 00:41:16,471 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-03-10 00:41:16,472 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2026-03-10 00:41:16,475 [ scc.git] DEBUG ## Unique users: [] 2026-03-10 00:41:16,475 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:41:16,475 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:16,477 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2026-03-10 00:41:16,480 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:16,482 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2026-03-10 00:41:16,489 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:41:16,492 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2026-03-10 00:41:16,492 [ scc.git] DEBUG package.json | 2 +- 2026-03-10 00:41:16,492 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2026-03-10 00:41:16,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:41:16,641 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2026-03-10 00:41:16,644 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:16,646 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2026-03-10 00:41:16,655 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-10 00:41:16,655 [ scc.git] DEBUG Auto-merging package.json 2026-03-10 00:41:16,656 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:41:16,659 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2026-03-10 00:41:16,659 [ scc.git] DEBUG package.json | 2 +- 2026-03-10 00:41:16,659 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-03-10 00:41:17,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:41:17,050 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-03-10 00:41:17,053 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:17,055 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-03-10 00:41:17,062 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:41:17,065 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-10 00:41:17,065 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-10 00:41:17,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:41:17,455 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-10 00:41:17,492 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:41:17,492 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:17,494 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:41:17,530 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-10 00:41:17,533 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8807715d10> has no local changes 2026-03-10 00:41:17,534 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#84 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-03-10 00:41:17,539 [ scc.git] DEBUG [detached HEAD 6b086e6] merge master -Dorg -Ssuccess-only 2026-03-10 00:41:17,540 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:41:17,540 [ scc.repo] DEBUG ## PRs found: 2026-03-10 00:41:17,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2026-03-10 00:41:18,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2026-03-10 00:41:18,429 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-10 00:41:19,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2026-03-10 00:41:19,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:41:20,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:41:20,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2026-03-10 00:41:20,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:41:20,990 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-10 00:41:20,990 [ scc.repo] DEBUG ## Branches found: 2026-03-10 00:41:20,990 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-03-10 00:41:20,991 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:41:20,991 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:20,993 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-10 00:41:20,995 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-10 00:41:20,995 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-10 00:41:20,998 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-10 00:41:21,001 [ scc.git] DEBUG Already up to date. 2026-03-10 00:41:21,001 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2026-03-10 00:41:21,283 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2026-03-10 00:41:21,283 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2026-03-10 00:41:21,286 [ scc.git] DEBUG ## Unique users: [] 2026-03-10 00:41:21,286 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:41:21,286 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:21,288 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2026-03-10 00:41:21,291 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:21,293 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2026-03-10 00:41:21,299 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:41:21,302 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-10 00:41:21,302 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-10 00:41:21,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:41:21,453 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-10 00:41:21,489 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:41:21,489 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:21,492 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:41:21,528 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-10 00:41:21,530 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f880770bdd0> has no local changes 2026-03-10 00:41:21,530 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#84 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-03-10 00:41:21,536 [ scc.git] DEBUG [detached HEAD 98fbd59] merge master -Dorg -Ssuccess-only 2026-03-10 00:41:21,536 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:41:21,536 [ scc.repo] DEBUG ## PRs found: 2026-03-10 00:41:21,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2026-03-10 00:41:22,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None 2026-03-10 00:41:22,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34/comments HTTP/1.1" 200 None 2026-03-10 00:41:22,917 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-10 00:41:23,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-03-10 00:41:24,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:41:24,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:41:25,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-03-10 00:41:25,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None 2026-03-10 00:41:26,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-03-10 00:41:26,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None 2026-03-10 00:41:26,434 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-10 00:41:26,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2026-03-10 00:41:26,918 [ scc.repo] DEBUG ## Branches found: 2026-03-10 00:41:26,918 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-03-10 00:41:26,919 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:41:26,919 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:26,921 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-10 00:41:26,923 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-10 00:41:26,923 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-10 00:41:26,926 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-10 00:41:26,934 [ scc.git] DEBUG Updating bdfeb5e..fc9ff96 2026-03-10 00:41:27,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/36 HTTP/1.1" 200 None 2026-03-10 00:41:28,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/35 HTTP/1.1" 200 None 2026-03-10 00:41:28,346 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head' 2026-03-10 00:41:28,623 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2026-03-10 00:41:28,623 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD 2026-03-10 00:41:28,627 [ scc.git] DEBUG ## Unique users: [] 2026-03-10 00:41:28,627 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:41:28,627 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:28,629 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301' 2026-03-10 00:41:28,631 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:28,634 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301' 2026-03-10 00:41:28,640 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-03-10 00:41:28,640 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-03-10 00:41:28,640 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-10 00:41:28,640 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-10 00:41:28,642 [ scc.git] DEBUG Calling 'git reset --hard fc9ff96901ce7b92e3ba51327ba7ba64fff76959' 2026-03-10 00:41:28,646 [ scc.git] DEBUG HEAD is now at fc9ff96 Bump version: 0.4.1 → 0.4.2.dev0 2026-03-10 00:41:28,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:41:28,812 [ scc.git] DEBUG Calling 'git merge-base fc9ff96901ce7b92e3ba51327ba7ba64fff76959 149bb248277256d589ea0db597c04739e8134301' 2026-03-10 00:41:28,815 [ scc.git] DEBUG Calling 'git diff --name-only bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9..fc9ff96901ce7b92e3ba51327ba7ba64fff76959' 2026-03-10 00:41:28,817 [ scc.git] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - Upstream changes - .github/workflows/publish_pypi.yml --conflicts 2026-03-10 00:41:28,819 [ scc.config] DEBUG Found github.token 2026-03-10 00:41:28,819 [ scc.git] DEBUG Not adding comment to issue #34, already --conflicts. 2026-03-10 00:41:28,819 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-10 00:41:28,856 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:41:28,856 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:28,858 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:41:28,893 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-10 00:41:28,896 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f88088a2950> has no local changes 2026-03-10 00:41:28,896 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Conflicting PRs (not included): - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#84 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-03-10 00:41:28,902 [ scc.git] DEBUG [detached HEAD d9311d1] merge master -Dorg -Ssuccess-only 2026-03-10 00:41:28,902 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:41:28,902 [ scc.repo] DEBUG ## PRs found: 2026-03-10 00:41:29,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2026-03-10 00:41:29,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2026-03-10 00:41:29,981 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-10 00:41:30,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2026-03-10 00:41:31,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:41:31,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:41:32,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2026-03-10 00:41:32,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:41:32,478 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-10 00:41:32,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2026-03-10 00:41:33,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2026-03-10 00:41:34,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2026-03-10 00:41:34,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:41:35,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2026-03-10 00:41:35,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:41:35,578 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2026-03-10 00:41:35,578 [ scc.repo] DEBUG ## Branches found: 2026-03-10 00:41:35,578 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-03-10 00:41:35,578 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:41:35,578 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:35,580 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-10 00:41:35,583 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-10 00:41:35,583 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-10 00:41:35,585 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-10 00:41:35,588 [ scc.git] DEBUG Already up to date. 2026-03-10 00:41:35,588 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-03-10 00:41:35,891 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-03-10 00:41:35,891 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-03-10 00:41:35,894 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-03-10 00:41:36,170 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-03-10 00:41:36,170 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-03-10 00:41:36,174 [ scc.git] DEBUG ## Unique users: [] 2026-03-10 00:41:36,174 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:41:36,174 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:36,176 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-03-10 00:41:36,179 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:36,181 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-03-10 00:41:36,188 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2026-03-10 00:41:36,188 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2026-03-10 00:41:36,188 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2026-03-10 00:41:36,188 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2026-03-10 00:41:36,189 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2026-03-10 00:41:36,189 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2026-03-10 00:41:36,189 [ scc.git] DEBUG Auto-merging setup.py 2026-03-10 00:41:36,189 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2026-03-10 00:41:36,189 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-10 00:41:36,189 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-10 00:41:36,191 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2026-03-10 00:41:36,195 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2026-03-10 00:41:36,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:41:36,353 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-03-10 00:41:36,356 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2026-03-10 00:41:36,358 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - omero_signup/signup_settings.py - omero_signup/urls.py - setup.py --conflicts 2026-03-10 00:41:36,360 [ scc.config] DEBUG Found github.token 2026-03-10 00:41:36,360 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2026-03-10 00:41:36,360 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-03-10 00:41:36,363 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:36,365 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-03-10 00:41:36,371 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:41:36,374 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-10 00:41:36,374 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-10 00:41:36,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:41:36,782 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-10 00:41:36,818 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:41:36,818 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:36,820 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:41:36,856 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-10 00:41:36,860 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8807776650> has no local changes 2026-03-10 00:41:36,860 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#84 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-03-10 00:41:36,865 [ scc.git] DEBUG [detached HEAD c3c5e6f] merge master -Dorg -Ssuccess-only 2026-03-10 00:41:36,866 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:41:36,866 [ scc.repo] DEBUG ## PRs found: 2026-03-10 00:41:37,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2026-03-10 00:41:37,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2026-03-10 00:41:38,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2026-03-10 00:41:38,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2026-03-10 00:41:39,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2026-03-10 00:41:39,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:41:40,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2026-03-10 00:41:40,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/c18c080227e97899382d3464baa7c7885a621623?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:41:40,704 [ scc.repo] DEBUG - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-03-10 00:41:40,704 [ scc.repo] DEBUG ## Branches found: 2026-03-10 00:41:40,704 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-03-10 00:41:40,704 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:41:40,704 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:40,706 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-10 00:41:40,709 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-10 00:41:40,709 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-10 00:41:40,711 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-10 00:41:40,719 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2026-03-10 00:41:41,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2026-03-10 00:41:42,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2026-03-10 00:41:42,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2026-03-10 00:41:42,929 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-03-10 00:41:43,355 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2026-03-10 00:41:43,355 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-03-10 00:41:43,359 [ scc.git] DEBUG ## Unique users: [] 2026-03-10 00:41:43,359 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:41:43,359 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:43,361 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c18c080227e97899382d3464baa7c7885a621623' 2026-03-10 00:41:43,363 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:43,366 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (Add 'ms' target for ./docker) c18c080227e97899382d3464baa7c7885a621623' 2026-03-10 00:41:43,372 [ scc.git] DEBUG Auto-merging .github/workflows/main.yml 2026-03-10 00:41:43,373 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:41:43,375 [ scc.git] DEBUG .github/workflows/main.yml | 8 ++++++++ 2026-03-10 00:41:43,376 [ scc.git] DEBUG docker | 22 ++++++++++++++++++++++ 2026-03-10 00:41:43,376 [ scc.git] DEBUG ms/compose.yml | 11 +++++++++++ 2026-03-10 00:41:43,376 [ scc.git] DEBUG ms/example/Dockerfile | 13 +++++++++++++ 2026-03-10 00:41:43,376 [ scc.git] DEBUG ms/test | 2 ++ 2026-03-10 00:41:43,376 [ scc.git] DEBUG 5 files changed, 56 insertions(+) 2026-03-10 00:41:43,376 [ scc.git] DEBUG create mode 100644 ms/compose.yml 2026-03-10 00:41:43,376 [ scc.git] DEBUG create mode 100644 ms/example/Dockerfile 2026-03-10 00:41:43,376 [ scc.git] DEBUG create mode 100755 ms/test 2026-03-10 00:41:43,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:41:43,560 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-10 00:41:43,597 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:41:43,597 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:43,599 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:41:43,634 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-10 00:41:43,637 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8807776210> has no local changes 2026-03-10 00:41:43,638 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Generated by OMERO-plugins-push#84 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-03-10 00:41:43,643 [ scc.git] DEBUG [detached HEAD b456fb5] merge master -Dorg -Ssuccess-only 2026-03-10 00:41:43,644 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:41:43,644 [ scc.repo] DEBUG ## PRs found: 2026-03-10 00:41:44,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2026-03-10 00:41:44,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2026-03-10 00:41:44,518 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-10 00:41:45,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2026-03-10 00:41:45,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:41:46,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:41:46,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2026-03-10 00:41:46,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:41:46,970 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-10 00:41:46,970 [ scc.repo] DEBUG ## Branches found: 2026-03-10 00:41:46,970 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-03-10 00:41:46,970 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:41:46,970 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:46,972 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-10 00:41:46,975 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-10 00:41:46,975 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-10 00:41:46,977 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-10 00:41:46,980 [ scc.git] DEBUG Already up to date. 2026-03-10 00:41:46,980 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-03-10 00:41:47,353 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2026-03-10 00:41:47,354 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-03-10 00:41:47,357 [ scc.git] DEBUG ## Unique users: [] 2026-03-10 00:41:47,357 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:41:47,357 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:47,359 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-03-10 00:41:47,362 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:47,364 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-03-10 00:41:47,370 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:41:47,372 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-10 00:41:47,372 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-10 00:41:47,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:41:47,513 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-10 00:41:47,550 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:41:47,550 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:47,552 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:41:47,588 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-10 00:41:47,591 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f88077266d0> has no local changes 2026-03-10 00:41:47,591 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#84 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-03-10 00:41:47,596 [ scc.git] DEBUG [detached HEAD 0988074] merge master -Dorg -Ssuccess-only 2026-03-10 00:41:47,596 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:41:47,596 [ scc.repo] DEBUG ## PRs found: 2026-03-10 00:41:47,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2026-03-10 00:41:48,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2026-03-10 00:41:48,527 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-10 00:41:49,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2026-03-10 00:41:49,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:41:50,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:41:50,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2026-03-10 00:41:50,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:41:50,972 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-10 00:41:50,972 [ scc.repo] DEBUG ## Branches found: 2026-03-10 00:41:50,972 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-03-10 00:41:50,972 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:41:50,972 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:50,975 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-10 00:41:50,977 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-10 00:41:50,977 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-10 00:41:50,980 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-10 00:41:50,986 [ scc.git] DEBUG Updating deab817..160d894 2026-03-10 00:41:51,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2026-03-10 00:41:51,679 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-03-10 00:41:51,945 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2026-03-10 00:41:51,945 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-03-10 00:41:51,949 [ scc.git] DEBUG ## Unique users: [] 2026-03-10 00:41:51,949 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:41:51,949 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:51,951 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-03-10 00:41:51,954 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:51,956 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-03-10 00:41:51,962 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:41:51,965 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-10 00:41:51,965 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-10 00:41:52,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:41:52,118 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-10 00:41:52,155 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:41:52,155 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:52,157 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:41:52,193 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-10 00:41:52,196 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8807778890> has no local changes 2026-03-10 00:41:52,196 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#84 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-03-10 00:41:52,201 [ scc.git] DEBUG [detached HEAD 92ab58c] merge master -Dorg -Ssuccess-only 2026-03-10 00:41:52,201 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:41:52,202 [ scc.git] INFO Overriding base-branch from master to main 2026-03-10 00:41:52,202 [ scc.repo] DEBUG ## PRs found: 2026-03-10 00:41:52,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2026-03-10 00:41:53,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2026-03-10 00:41:53,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2026-03-10 00:41:54,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2026-03-10 00:41:54,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:41:55,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:41:55,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2026-03-10 00:41:56,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:41:56,060 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2026-03-10 00:41:56,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2026-03-10 00:41:57,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2026-03-10 00:41:57,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2026-03-10 00:41:58,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2026-03-10 00:41:58,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:41:59,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2026-03-10 00:41:59,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:41:59,418 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-03-10 00:41:59,418 [ scc.repo] DEBUG ## Branches found: 2026-03-10 00:41:59,418 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-03-10 00:41:59,418 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:41:59,418 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:41:59,421 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2026-03-10 00:41:59,423 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-10 00:41:59,423 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2026-03-10 00:41:59,426 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2026-03-10 00:41:59,432 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2026-03-10 00:42:00,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2026-03-10 00:42:00,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2026-03-10 00:42:00,956 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2026-03-10 00:42:01,342 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-03-10 00:42:01,342 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2026-03-10 00:42:01,346 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2026-03-10 00:42:01,602 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-03-10 00:42:01,603 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2026-03-10 00:42:01,606 [ scc.git] DEBUG ## Unique users: [] 2026-03-10 00:42:01,606 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:42:01,606 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:42:01,608 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-03-10 00:42:01,611 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:42:01,613 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-03-10 00:42:01,620 [ scc.git] DEBUG Auto-merging README.rst 2026-03-10 00:42:01,620 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2026-03-10 00:42:01,620 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2026-03-10 00:42:01,620 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-03-10 00:42:01,620 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-10 00:42:01,621 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-10 00:42:01,623 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-03-10 00:42:01,627 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-03-10 00:42:01,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:42:01,784 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-03-10 00:42:01,786 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-03-10 00:42:01,789 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2026-03-10 00:42:01,791 [ scc.config] DEBUG Found github.token 2026-03-10 00:42:01,791 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2026-03-10 00:42:01,791 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-03-10 00:42:01,794 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:42:01,796 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-03-10 00:42:01,803 [ scc.git] DEBUG Auto-merging README.rst 2026-03-10 00:42:01,803 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-03-10 00:42:01,803 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:42:01,806 [ scc.git] DEBUG README.rst | 3 + 2026-03-10 00:42:01,806 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2026-03-10 00:42:01,806 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2026-03-10 00:42:01,807 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2026-03-10 00:42:01,807 [ scc.git] DEBUG setup.py | 5 +- 2026-03-10 00:42:01,807 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2026-03-10 00:42:01,807 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2026-03-10 00:42:02,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:42:02,172 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-10 00:42:02,210 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:42:02,210 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:42:02,212 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:42:02,247 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-10 00:42:02,251 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f880778e350> has no local changes 2026-03-10 00:42:02,251 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#84 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-03-10 00:42:02,256 [ scc.git] DEBUG [detached HEAD 8df03db] merge master -Dorg -Ssuccess-only 2026-03-10 00:42:02,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:42:02,257 [ scc.repo] DEBUG ## PRs found: 2026-03-10 00:42:02,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2026-03-10 00:42:03,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2026-03-10 00:42:03,210 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-10 00:42:03,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2026-03-10 00:42:04,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:42:04,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:42:05,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2026-03-10 00:42:05,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:42:05,690 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-10 00:42:05,690 [ scc.repo] DEBUG ## Branches found: 2026-03-10 00:42:05,690 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-03-10 00:42:05,690 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:42:05,690 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:42:05,692 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-10 00:42:05,694 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-10 00:42:05,695 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-10 00:42:05,697 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-10 00:42:05,700 [ scc.git] DEBUG Already up to date. 2026-03-10 00:42:05,700 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2026-03-10 00:42:05,985 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2026-03-10 00:42:05,985 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2026-03-10 00:42:05,988 [ scc.git] DEBUG ## Unique users: [] 2026-03-10 00:42:05,989 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:42:05,989 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:42:05,991 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-03-10 00:42:05,993 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:42:05,995 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-03-10 00:42:06,002 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:42:06,004 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-10 00:42:06,004 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-10 00:42:06,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:42:06,152 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-10 00:42:06,189 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:42:06,189 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:42:06,191 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:42:06,227 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-10 00:42:06,230 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8807774490> has no local changes 2026-03-10 00:42:06,230 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#84 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-03-10 00:42:06,235 [ scc.git] DEBUG [detached HEAD 19982c5] merge master -Dorg -Ssuccess-only 2026-03-10 00:42:06,236 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:42:06,236 [ scc.repo] DEBUG ## PRs found: 2026-03-10 00:42:06,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2026-03-10 00:42:07,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2026-03-10 00:42:07,170 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-10 00:42:07,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2026-03-10 00:42:08,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-10 00:42:08,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-10 00:42:09,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2026-03-10 00:42:09,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2026-03-10 00:42:09,557 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-10 00:42:09,557 [ scc.repo] DEBUG ## Branches found: 2026-03-10 00:42:09,557 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-03-10 00:42:09,557 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:42:09,558 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:42:09,560 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-10 00:42:09,562 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-10 00:42:09,562 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-10 00:42:09,565 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-10 00:42:09,567 [ scc.git] DEBUG Already up to date. 2026-03-10 00:42:09,568 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2026-03-10 00:42:09,986 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2026-03-10 00:42:09,986 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2026-03-10 00:42:09,989 [ scc.git] DEBUG ## Unique users: [] 2026-03-10 00:42:09,989 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:42:09,989 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:42:09,991 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-03-10 00:42:09,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:42:09,996 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-03-10 00:42:10,002 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-10 00:42:10,005 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-10 00:42:10,005 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-10 00:42:10,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:42:10,162 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-10 00:42:10,199 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:42:10,199 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:42:10,201 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:42:10,237 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-10 00:42:10,240 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f88077416d0> has no local changes 2026-03-10 00:42:10,240 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#84 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-03-10 00:42:10,246 [ scc.git] DEBUG [detached HEAD b2660d5] merge master -Dorg -Ssuccess-only 2026-03-10 00:42:10,246 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:42:10,246 [ scc.repo] DEBUG ## PRs found: 2026-03-10 00:42:10,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2026-03-10 00:42:10,596 [ scc.repo] DEBUG ## Branches found: 2026-03-10 00:42:10,596 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-03-10 00:42:10,596 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:42:10,597 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:42:10,599 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-10 00:42:10,601 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-10 00:42:10,601 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-10 00:42:10,603 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-10 00:42:10,606 [ scc.git] DEBUG Already up to date. 2026-03-10 00:42:10,606 [ scc.git] DEBUG ## Unique users: [] 2026-03-10 00:42:10,606 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:42:10,606 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:42:10,608 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-10 00:42:10,643 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:42:10,643 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:42:10,645 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:42:10,681 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-10 00:42:10,684 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f88045d7e90> has no local changes 2026-03-10 00:42:10,684 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#84 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-03-10 00:42:10,689 [ scc.git] DEBUG [detached HEAD 1fa5f27] merge master -Dorg -Ssuccess-only 2026-03-10 00:42:10,690 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:42:10,690 [ scc.git] INFO Overriding base-branch from master to develop 2026-03-10 00:42:10,690 [ scc.repo] DEBUG ## PRs found: 2026-03-10 00:42:11,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 2 2026-03-10 00:42:11,030 [ scc.repo] DEBUG ## Branches found: 2026-03-10 00:42:11,030 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-03-10 00:42:11,030 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:42:11,030 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:42:11,032 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-03-10 00:42:11,034 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-10 00:42:11,034 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-03-10 00:42:11,037 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-03-10 00:42:11,048 [ scc.git] DEBUG Updating 4b4c755..5b4d768 2026-03-10 00:42:11,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-03-10 00:42:12,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-03-10 00:42:13,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-03-10 00:42:13,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-03-10 00:42:14,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2026-03-10 00:42:15,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2026-03-10 00:42:15,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2026-03-10 00:42:15,975 [ scc.git] DEBUG ## Unique users: [] 2026-03-10 00:42:15,975 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:42:15,975 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:42:15,977 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-10 00:42:16,016 [ scc.git] DEBUG Get sha1 of %s 2026-03-10 00:42:16,016 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-10 00:42:16,018 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:42:16,054 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-10 00:42:16,058 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f88077ad4d0> has no local changes 2026-03-10 00:42:16,058 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#84 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-03-10 00:42:16,064 [ scc.git] DEBUG [detached HEAD 88e69ed] merge master -Dorg -Ssuccess-only 2026-03-10 00:42:16,064 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:42:16,064 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-10 00:42:16,134 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2026-03-10 00:42:16,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:42:16,392 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2026-03-10 00:42:16,394 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2026-03-10 00:42:16,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:42:16,789 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2026-03-10 00:42:16,791 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2026-03-10 00:42:17,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:42:17,188 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2026-03-10 00:42:17,189 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2026-03-10 00:42:17,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:42:17,584 [ scc.config] DEBUG Found submodule.omero-figure.url 2026-03-10 00:42:17,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:42:17,974 [ scc.config] DEBUG Found submodule.omero-figure.branch 2026-03-10 00:42:17,975 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2026-03-10 00:42:18,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:42:18,380 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2026-03-10 00:42:18,381 [ scc.config] DEBUG Found submodule.omero-gallery.url 2026-03-10 00:42:18,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:42:18,781 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2026-03-10 00:42:18,783 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2026-03-10 00:42:19,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:42:19,171 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2026-03-10 00:42:19,173 [ scc.config] DEBUG Found submodule.omero-mapr.url 2026-03-10 00:42:19,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:42:19,569 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2026-03-10 00:42:19,571 [ scc.config] DEBUG Found submodule.omero-metadata.url 2026-03-10 00:42:19,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:42:19,973 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2026-03-10 00:42:19,975 [ scc.config] DEBUG Found submodule.omero-parade.url 2026-03-10 00:42:20,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:42:20,368 [ scc.config] DEBUG Found submodule.omero-parade.branch 2026-03-10 00:42:20,370 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2026-03-10 00:42:20,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:42:20,758 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2026-03-10 00:42:20,760 [ scc.config] DEBUG Found submodule.omero-rois.url 2026-03-10 00:42:21,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:42:21,157 [ scc.config] DEBUG Found submodule.omero-signup.url 2026-03-10 00:42:21,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:42:21,590 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2026-03-10 00:42:21,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:42:21,989 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2026-03-10 00:42:21,991 [ scc.config] DEBUG Found submodule.omero-upload.url 2026-03-10 00:42:22,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:42:22,388 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2026-03-10 00:42:22,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:42:22,781 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2026-03-10 00:42:23,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:42:23,174 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2026-03-10 00:42:23,176 [ scc.config] DEBUG Found submodule.omero-weberror.url 2026-03-10 00:42:23,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:42:23,568 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2026-03-10 00:42:23,570 [ scc.config] DEBUG Found submodule.omero-webtest.url 2026-03-10 00:42:23,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:42:23,960 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2026-03-10 00:42:23,962 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2026-03-10 00:42:24,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:42:24,359 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2026-03-10 00:42:24,361 [ scc.config] DEBUG Found submodule.scripts.url 2026-03-10 00:42:24,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-10 00:42:24,761 [ scc.config] DEBUG Found submodule.scripts.branch 2026-03-10 00:42:24,761 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-10 00:42:24,838 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f880891c490> has local changes 2026-03-10 00:42:24,838 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Excluded PRs: - PR 669 will-moore 'Standalone python script' (stage: draft) - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) Updating 9cc36cde..acada9be Previously merged: - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 662 will-moore 'Export script handles OME-zarr images' Conflicting PRs (not included): - PR 663 will-moore 'Zarr' - PR 666 will-moore 'Standalone app' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..5e2de43 Previously merged: - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 513 jburel 'Bump Python version' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Conflicting PRs (not included): - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#84 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-03-10 00:42:24,849 [ scc.git] DEBUG [detached HEAD c7d6eca] merge master -Dorg -Ssuccess-only 2026-03-10 00:42:24,849 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2026-03-10 00:42:24,850 [ scc.merge] INFO Repository: ome/omero-plugins 2026-03-10 00:42:24,850 [ scc.merge] INFO Already up to date. 2026-03-10 00:42:24,850 [ scc.merge] INFO 2026-03-10 00:42:24,850 [ scc.merge] INFO Merged PRs: 2026-03-10 00:42:24,850 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-03-10 00:42:24,850 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-03-10 00:42:24,850 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-03-10 00:42:24,850 [ scc.merge] INFO 2026-03-10 00:42:24,850 [ scc.merge] INFO Repository: ome/minimal-omero-client 2026-03-10 00:42:24,850 [ scc.merge] INFO Already up to date. 2026-03-10 00:42:24,850 [ scc.merge] INFO 2026-03-10 00:42:24,850 [ scc.merge] INFO 2026-03-10 00:42:24,850 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2026-03-10 00:42:24,850 [ scc.merge] INFO Excluded PRs: 2026-03-10 00:42:24,850 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2026-03-10 00:42:24,850 [ scc.merge] INFO Already up to date. 2026-03-10 00:42:24,850 [ scc.merge] INFO 2026-03-10 00:42:24,850 [ scc.merge] INFO Merged PRs: 2026-03-10 00:42:24,850 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-10 00:42:24,850 [ scc.merge] INFO 2026-03-10 00:42:24,850 [ scc.merge] INFO Repository: ome/omero-cli-render 2026-03-10 00:42:24,850 [ scc.merge] INFO Excluded PRs: 2026-03-10 00:42:24,850 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2026-03-10 00:42:24,850 [ scc.merge] INFO Updating ce6e13c..68b7303 2026-03-10 00:42:24,850 [ scc.merge] INFO Previously merged: 2026-03-10 00:42:24,850 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2026-03-10 00:42:24,850 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2026-03-10 00:42:24,850 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2026-03-10 00:42:24,850 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2026-03-10 00:42:24,850 [ scc.merge] INFO 2026-03-10 00:42:24,850 [ scc.merge] INFO Merged PRs: 2026-03-10 00:42:24,850 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2026-03-10 00:42:24,850 [ scc.merge] INFO 2026-03-10 00:42:24,850 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2026-03-10 00:42:24,850 [ scc.merge] INFO Excluded PRs: 2026-03-10 00:42:24,850 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' (exclude comment) 2026-03-10 00:42:24,850 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2026-03-10 00:42:24,850 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2026-03-10 00:42:24,850 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2026-03-10 00:42:24,850 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-03-10 00:42:24,850 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2026-03-10 00:42:24,850 [ scc.merge] INFO Updating 11d3587..9f844b8 2026-03-10 00:42:24,850 [ scc.merge] INFO Previously merged: 2026-03-10 00:42:24,850 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2026-03-10 00:42:24,850 [ scc.merge] INFO - PR 192 jburel 'Set Omero pixel size' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-10 00:42:24,851 [ scc.merge] INFO 2026-03-10 00:42:24,851 [ scc.merge] INFO Merged PRs: 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 193 dominikl 'Only parse import uris if stated' 2026-03-10 00:42:24,851 [ scc.merge] INFO 2026-03-10 00:42:24,851 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-03-10 00:42:24,851 [ scc.merge] INFO 2026-03-10 00:42:24,851 [ scc.merge] INFO Repository: ome/omero-figure 2026-03-10 00:42:24,851 [ scc.merge] INFO Excluded PRs: 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 669 will-moore 'Standalone python script' (stage: draft) 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) 2026-03-10 00:42:24,851 [ scc.merge] INFO Updating 9cc36cde..acada9be 2026-03-10 00:42:24,851 [ scc.merge] INFO Previously merged: 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 667 Tom-TBT 'Label suggestion interface' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 664 Nirkan 'Handle many channels ' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2026-03-10 00:42:24,851 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-10 00:42:24,852 [ scc.merge] INFO 2026-03-10 00:42:24,852 [ scc.merge] INFO Merged PRs: 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 662 will-moore 'Export script handles OME-zarr images' 2026-03-10 00:42:24,852 [ scc.merge] INFO 2026-03-10 00:42:24,852 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 663 will-moore 'Zarr' 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 666 will-moore 'Standalone app' 2026-03-10 00:42:24,852 [ scc.merge] INFO 2026-03-10 00:42:24,852 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2026-03-10 00:42:24,852 [ scc.merge] INFO Already up to date. 2026-03-10 00:42:24,852 [ scc.merge] INFO 2026-03-10 00:42:24,852 [ scc.merge] INFO Merged PRs: 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-10 00:42:24,852 [ scc.merge] INFO 2026-03-10 00:42:24,852 [ scc.merge] INFO Repository: ome/omero-gallery 2026-03-10 00:42:24,852 [ scc.merge] INFO Already up to date. 2026-03-10 00:42:24,852 [ scc.merge] INFO 2026-03-10 00:42:24,852 [ scc.merge] INFO Merged PRs: 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-03-10 00:42:24,852 [ scc.merge] INFO 2026-03-10 00:42:24,852 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-03-10 00:42:24,852 [ scc.merge] INFO 2026-03-10 00:42:24,852 [ scc.merge] INFO Repository: ome/omero-iviewer 2026-03-10 00:42:24,852 [ scc.merge] INFO Excluded PRs: 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft) 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure) 2026-03-10 00:42:24,852 [ scc.merge] INFO Updating 7a798ce..5e2de43 2026-03-10 00:42:24,852 [ scc.merge] INFO Previously merged: 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2026-03-10 00:42:24,852 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-10 00:42:24,853 [ scc.merge] INFO 2026-03-10 00:42:24,853 [ scc.merge] INFO Merged PRs: 2026-03-10 00:42:24,853 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2026-03-10 00:42:24,853 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2026-03-10 00:42:24,853 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2026-03-10 00:42:24,853 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-03-10 00:42:24,853 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2026-03-10 00:42:24,853 [ scc.merge] INFO - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' 2026-03-10 00:42:24,853 [ scc.merge] INFO 2026-03-10 00:42:24,853 [ scc.merge] INFO Repository: ome/omero-mapr 2026-03-10 00:42:24,853 [ scc.merge] INFO Excluded PRs: 2026-03-10 00:42:24,853 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2026-03-10 00:42:24,853 [ scc.merge] INFO Already up to date. 2026-03-10 00:42:24,853 [ scc.merge] INFO 2026-03-10 00:42:24,853 [ scc.merge] INFO Merged PRs: 2026-03-10 00:42:24,853 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2026-03-10 00:42:24,853 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-10 00:42:24,853 [ scc.merge] INFO 2026-03-10 00:42:24,853 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-10 00:42:24,853 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-10 00:42:24,853 [ scc.merge] INFO 2026-03-10 00:42:24,853 [ scc.merge] INFO Repository: ome/omero-metadata 2026-03-10 00:42:24,853 [ scc.merge] INFO Updating 3cd120c..55060a2 2026-03-10 00:42:24,853 [ scc.merge] INFO Previously merged: 2026-03-10 00:42:24,853 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-10 00:42:24,853 [ scc.merge] INFO 2026-03-10 00:42:24,853 [ scc.merge] INFO Merged PRs: 2026-03-10 00:42:24,853 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-03-10 00:42:24,853 [ scc.merge] INFO 2026-03-10 00:42:24,853 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-10 00:42:24,853 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-03-10 00:42:24,853 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-03-10 00:42:24,853 [ scc.merge] INFO 2026-03-10 00:42:24,853 [ scc.merge] INFO Repository: ome/omero-parade 2026-03-10 00:42:24,853 [ scc.merge] INFO Excluded PRs: 2026-03-10 00:42:24,853 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2026-03-10 00:42:24,853 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2026-03-10 00:42:24,853 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2026-03-10 00:42:24,853 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2026-03-10 00:42:24,853 [ scc.merge] INFO Already up to date. 2026-03-10 00:42:24,853 [ scc.merge] INFO 2026-03-10 00:42:24,853 [ scc.merge] INFO Merged PRs: 2026-03-10 00:42:24,853 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-03-10 00:42:24,853 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-03-10 00:42:24,853 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-10 00:42:24,853 [ scc.merge] INFO 2026-03-10 00:42:24,853 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2026-03-10 00:42:24,853 [ scc.merge] INFO Already up to date. 2026-03-10 00:42:24,853 [ scc.merge] INFO 2026-03-10 00:42:24,853 [ scc.merge] INFO Merged PRs: 2026-03-10 00:42:24,854 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-10 00:42:24,854 [ scc.merge] INFO 2026-03-10 00:42:24,854 [ scc.merge] INFO Repository: ome/omero-rois 2026-03-10 00:42:24,854 [ scc.merge] INFO Excluded PRs: 2026-03-10 00:42:24,854 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-03-10 00:42:24,854 [ scc.merge] INFO Updating bdfeb5e..fc9ff96 2026-03-10 00:42:24,854 [ scc.merge] INFO Previously merged: 2026-03-10 00:42:24,854 [ scc.merge] INFO - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' 2026-03-10 00:42:24,854 [ scc.merge] INFO - PR 35 will-moore 'Add roi to array functions' 2026-03-10 00:42:24,854 [ scc.merge] INFO 2026-03-10 00:42:24,854 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-10 00:42:24,854 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-10 00:42:24,854 [ scc.merge] INFO 2026-03-10 00:42:24,854 [ scc.merge] INFO Repository: ome/omero-signup 2026-03-10 00:42:24,854 [ scc.merge] INFO Already up to date. 2026-03-10 00:42:24,854 [ scc.merge] INFO 2026-03-10 00:42:24,854 [ scc.merge] INFO Merged PRs: 2026-03-10 00:42:24,854 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-10 00:42:24,854 [ scc.merge] INFO 2026-03-10 00:42:24,854 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-10 00:42:24,854 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2026-03-10 00:42:24,854 [ scc.merge] INFO 2026-03-10 00:42:24,854 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2026-03-10 00:42:24,854 [ scc.merge] INFO Excluded PRs: 2026-03-10 00:42:24,854 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2026-03-10 00:42:24,854 [ scc.merge] INFO Updating cda3ec6..c8a0015 2026-03-10 00:42:24,854 [ scc.merge] INFO Previously merged: 2026-03-10 00:42:24,854 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2026-03-10 00:42:24,854 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2026-03-10 00:42:24,854 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2026-03-10 00:42:24,854 [ scc.merge] INFO 2026-03-10 00:42:24,854 [ scc.merge] INFO Merged PRs: 2026-03-10 00:42:24,854 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-03-10 00:42:24,854 [ scc.merge] INFO 2026-03-10 00:42:24,854 [ scc.merge] INFO Repository: ome/omero-upload 2026-03-10 00:42:24,854 [ scc.merge] INFO Already up to date. 2026-03-10 00:42:24,854 [ scc.merge] INFO 2026-03-10 00:42:24,854 [ scc.merge] INFO Merged PRs: 2026-03-10 00:42:24,854 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-10 00:42:24,854 [ scc.merge] INFO 2026-03-10 00:42:24,854 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2026-03-10 00:42:24,854 [ scc.merge] INFO Updating deab817..160d894 2026-03-10 00:42:24,854 [ scc.merge] INFO Previously merged: 2026-03-10 00:42:24,854 [ scc.merge] INFO - PR 20 jburel 'Build' 2026-03-10 00:42:24,854 [ scc.merge] INFO 2026-03-10 00:42:24,854 [ scc.merge] INFO Merged PRs: 2026-03-10 00:42:24,854 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-10 00:42:24,854 [ scc.merge] INFO 2026-03-10 00:42:24,854 [ scc.merge] INFO Repository: ome/omero-web-zarr 2026-03-10 00:42:24,854 [ scc.merge] INFO Excluded PRs: 2026-03-10 00:42:24,854 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2026-03-10 00:42:24,855 [ scc.merge] INFO Updating 8f3c313..4e1e685 2026-03-10 00:42:24,855 [ scc.merge] INFO Previously merged: 2026-03-10 00:42:24,855 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2026-03-10 00:42:24,855 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2026-03-10 00:42:24,855 [ scc.merge] INFO 2026-03-10 00:42:24,855 [ scc.merge] INFO Merged PRs: 2026-03-10 00:42:24,855 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2026-03-10 00:42:24,855 [ scc.merge] INFO 2026-03-10 00:42:24,855 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-10 00:42:24,855 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-03-10 00:42:24,855 [ scc.merge] INFO 2026-03-10 00:42:24,855 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2026-03-10 00:42:24,855 [ scc.merge] INFO Already up to date. 2026-03-10 00:42:24,855 [ scc.merge] INFO 2026-03-10 00:42:24,855 [ scc.merge] INFO Merged PRs: 2026-03-10 00:42:24,855 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-10 00:42:24,855 [ scc.merge] INFO 2026-03-10 00:42:24,855 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2026-03-10 00:42:24,855 [ scc.merge] INFO Already up to date. 2026-03-10 00:42:24,855 [ scc.merge] INFO 2026-03-10 00:42:24,855 [ scc.merge] INFO Merged PRs: 2026-03-10 00:42:24,855 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-10 00:42:24,855 [ scc.merge] INFO 2026-03-10 00:42:24,855 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2026-03-10 00:42:24,855 [ scc.merge] INFO Already up to date. 2026-03-10 00:42:24,855 [ scc.merge] INFO 2026-03-10 00:42:24,855 [ scc.merge] INFO 2026-03-10 00:42:24,855 [ scc.merge] INFO Repository: ome/scripts 2026-03-10 00:42:24,855 [ scc.merge] INFO Updating 4b4c755..5b4d768 2026-03-10 00:42:24,855 [ scc.merge] INFO Previously merged: 2026-03-10 00:42:24,855 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-03-10 00:42:24,855 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-03-10 00:42:24,855 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-03-10 00:42:24,855 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-03-10 00:42:24,855 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2026-03-10 00:42:24,855 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2026-03-10 00:42:24,855 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2026-03-10 00:42:24,855 [ scc.merge] INFO 2026-03-10 00:42:24,855 [ scc.merge] INFO 2026-03-10 00:42:24,855 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-03-10 00:42:24,855 [ scc.git] DEBUG Calling 'git remote' 2026-03-10 00:42:24,857 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-03-10 00:42:24,857 [ scc.git] DEBUG Calling 'git remote' 2026-03-10 00:42:24,860 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:42:24,860 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-03-10 00:42:24,860 [ scc.git] DEBUG Calling 'git remote' 2026-03-10 00:42:24,862 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:42:24,862 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-03-10 00:42:24,862 [ scc.git] DEBUG Calling 'git remote' 2026-03-10 00:42:24,864 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:42:24,864 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-03-10 00:42:24,864 [ scc.git] DEBUG Calling 'git remote' 2026-03-10 00:42:24,866 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:42:24,866 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-03-10 00:42:24,866 [ scc.git] DEBUG Calling 'git remote' 2026-03-10 00:42:24,868 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:42:24,868 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-03-10 00:42:24,868 [ scc.git] DEBUG Calling 'git remote' 2026-03-10 00:42:24,870 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:42:24,870 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-03-10 00:42:24,870 [ scc.git] DEBUG Calling 'git remote' 2026-03-10 00:42:24,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:42:24,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-03-10 00:42:24,872 [ scc.git] DEBUG Calling 'git remote' 2026-03-10 00:42:24,874 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:42:24,874 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-03-10 00:42:24,874 [ scc.git] DEBUG Calling 'git remote' 2026-03-10 00:42:24,876 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:42:24,876 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-03-10 00:42:24,876 [ scc.git] DEBUG Calling 'git remote' 2026-03-10 00:42:24,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:42:24,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-03-10 00:42:24,878 [ scc.git] DEBUG Calling 'git remote' 2026-03-10 00:42:24,880 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:42:24,880 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-03-10 00:42:24,880 [ scc.git] DEBUG Calling 'git remote' 2026-03-10 00:42:24,882 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:42:24,882 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-03-10 00:42:24,882 [ scc.git] DEBUG Calling 'git remote' 2026-03-10 00:42:24,884 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:42:24,885 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-03-10 00:42:24,885 [ scc.git] DEBUG Calling 'git remote' 2026-03-10 00:42:24,887 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:42:24,887 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-03-10 00:42:24,887 [ scc.git] DEBUG Calling 'git remote' 2026-03-10 00:42:24,889 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:42:24,889 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-03-10 00:42:24,889 [ scc.git] DEBUG Calling 'git remote' 2026-03-10 00:42:24,891 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:42:24,891 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-03-10 00:42:24,891 [ scc.git] DEBUG Calling 'git remote' 2026-03-10 00:42:24,893 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:42:24,893 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-03-10 00:42:24,893 [ scc.git] DEBUG Calling 'git remote' 2026-03-10 00:42:24,895 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:42:24,895 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-03-10 00:42:24,895 [ scc.git] DEBUG Calling 'git remote' 2026-03-10 00:42:24,897 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:42:24,897 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-03-10 00:42:24,897 [ scc.git] DEBUG Calling 'git remote' 2026-03-10 00:42:24,899 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:42:24,899 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-03-10 00:42:24,899 [ scc.git] DEBUG Calling 'git remote' 2026-03-10 00:42:24,901 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-10 00:42:24,901 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-03-10 00:42:24,901 [ scc.git] DEBUG Calling 'git remote' 2026-03-10 00:42:24,903 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.6-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 06f721a] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD b32f240] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-03-10 00:43:10,988 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-03-10 00:43:20,232 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-03-10 00:43:22,636 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-03-10 00:43:27,251 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-03-10 00:44:06,635 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS