08:12:39Started by upstream project "Trigger" build number 12908:12:39originally caused by:
08:12:39 Started by user devspace08:12:39Running as SYSTEM
08:12:39Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-push
08:12:39The recommended git tool is: NONE
08:12:39No credentials specified
08:12:39 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-push/src/.git # timeout=10
08:12:39Fetching changes from the remote Git repository
08:12:39 > git config remote.origin.url https://github.com/ome/openmicroscopy.git # timeout=10
08:12:39Fetching upstream changes from https://github.com/ome/openmicroscopy.git08:12:39 > git --version # timeout=10
08:12:39 > git --version # 'git version 2.52.0'
08:12:39 > git fetch --tags --force --progress -- https://github.com/ome/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
08:12:47 > git rev-parse origin/develop^{commit} # timeout=10
08:12:47Checking out Revision 7b02e173accf5faba061e1841986a90b8f6dfa77 (origin/develop)
08:12:47 > git config core.sparsecheckout # timeout=10
08:12:47 > git checkout -f 7b02e173accf5faba061e1841986a90b8f6dfa77 # timeout=30
08:13:07Commit message: "Merge pull request #6478 from dominikl/ozpb_2"
08:13:07 > git rev-list --no-walk 7b02e173accf5faba061e1841986a90b8f6dfa77 # timeout=10
08:13:07Cleaning workspace
08:13:07 > git rev-parse --verify HEAD # timeout=10
08:13:07Resetting working tree
08:13:07 > git reset --hard # timeout=10
08:13:08 > git clean -fdx # timeout=10
08:13:08Copied 1 artifact from "OMERO-python-superbuild-build" build number 9908:13:08[OMERO-push] $ /bin/bash -xe /tmp/jenkins17047586545171590259.sh
08:13:08+ python3.11 -mvenv venv
08:13:11+ source /home/omero/workspace/OMERO-push/venv/bin/activate
08:13:11++ deactivate nondestructive
08:13:11++ '[' -n '' ']'
08:13:11++ '[' -n '' ']'
08:13:11++ hash -r
08:13:11++ '[' -n '' ']'
08:13:11++ unset VIRTUAL_ENV
08:13:11++ unset VIRTUAL_ENV_PROMPT
08:13:11++ '[' '!' nondestructive = nondestructive ']'
08:13:11++ VIRTUAL_ENV=/home/omero/workspace/OMERO-push/venv
08:13:11++ export VIRTUAL_ENV
08:13:11++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
08:13:11++ PATH=/home/omero/workspace/OMERO-push/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
08:13:11++ export PATH
08:13:11++ '[' -n '' ']'
08:13:11++ '[' -z '' ']'
08:13:11++ _OLD_VIRTUAL_PS1=
08:13:11++ PS1='(venv) '
08:13:11++ export PS1
08:13:11++ VIRTUAL_ENV_PROMPT='(venv) '
08:13:11++ export VIRTUAL_ENV_PROMPT
08:13:11++ hash -r
08:13:11+ pip install -U pip
08:13:16Requirement already satisfied: pip in ./venv/lib64/python3.11/site-packages (26.2.1)
08:13:16+ pip install -U scc
08:13:17Requirement already satisfied: scc in ./venv/lib64/python3.11/site-packages (0.20.0)
08:13:17Requirement already satisfied: PyGithub>=1.54 in ./venv/lib64/python3.11/site-packages (from scc) (2.9.1)
08:13:17Requirement already satisfied: PyYAML>=5.1 in ./venv/lib64/python3.11/site-packages (from scc) (6.0.3)
08:13:17Requirement already satisfied: future in ./venv/lib64/python3.11/site-packages (from scc) (1.0.0)
08:13:17Requirement already satisfied: ruamel.yaml in ./venv/lib64/python3.11/site-packages (from scc) (0.19.1)
08:13:17Requirement already satisfied: ruamel.yaml.jinja2 in ./venv/lib64/python3.11/site-packages (from scc) (0.2.7)
08:13:17Requirement already satisfied: six in ./venv/lib64/python3.11/site-packages (from scc) (1.17.0)
08:13:17Requirement already satisfied: urllib3<2 in ./venv/lib64/python3.11/site-packages (from scc) (1.26.20)
08:13:17Requirement already satisfied: yaclifw<0.3,>=0.2.0 in ./venv/lib64/python3.11/site-packages (from scc) (0.2.0)
08:13:17Requirement already satisfied: pynacl>=1.4.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (1.6.2)
08:13:17Requirement already satisfied: requests>=2.14.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (2.34.2)
08:13:17Requirement already satisfied: pyjwt>=2.4.0 in ./venv/lib64/python3.11/site-packages (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (2.13.0)
08:13:17Requirement already satisfied: typing-extensions>=4.5.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (4.16.0)
08:13:17Requirement already satisfied: cryptography>=3.4.0 in ./venv/lib64/python3.11/site-packages (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (49.0.0)
08:13:17Requirement already satisfied: cffi>=2.0.0 in ./venv/lib64/python3.11/site-packages (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (2.1.0)
08:13:17Requirement already satisfied: pycparser in ./venv/lib64/python3.11/site-packages (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (3.0)
08:13:17Requirement already satisfied: charset_normalizer<4,>=2 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (3.4.8)
08:13:17Requirement already satisfied: idna<4,>=2.5 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (3.18)
08:13:17Requirement already satisfied: certifi>=2023.5.7 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (2026.6.17)
08:13:18+ test -e src
08:13:18+ cd src
08:13:18++ git config github.user
08:13:18+ user=snoopycrimecop
08:13:18+ scc merge develop --no-ask --reset --shallow -S success-only
08:13:272026-10-14 08:13:27,996 [ scc.merge] INFO Merging Pull Request(s) based on develop
08:13:272026-10-14 08:13:27,996 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
08:13:272026-10-14 08:13:27,996 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
08:13:272026-10-14 08:13:27,996 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
08:13:272026-10-14 08:13:27,996 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
08:13:272026-10-14 08:13:27,996 [ scc.merge] INFO Excluding Pull Request(s) without successful status
08:13:432026-10-14 08:13:43,085 [ scc.merge] INFO Repository: ome/openmicroscopy
08:13:432026-10-14 08:13:43,085 [ scc.merge] INFO Excluded PRs:
08:13:432026-10-14 08:13:43,085 [ scc.merge] INFO - PR 6212 jburel 'add test to import images' (exclude comment)
08:13:432026-10-14 08:13:43,085 [ scc.merge] INFO Already up to date.
08:13:432026-10-14 08:13:43,085 [ scc.merge] INFO
08:13:432026-10-14 08:13:43,085 [ scc.merge] INFO Merged PRs:
08:13:432026-10-14 08:13:43,085 [ scc.merge] INFO - PR 6423 jburel 'Use \d'
08:13:432026-10-14 08:13:43,085 [ scc.merge] INFO - PR 6459 will-moore 'JSON API annotations tests'
08:13:432026-10-14 08:13:43,085 [ scc.merge] INFO
08:13:43+ cp etc/omero.properties etc/omero.properties.bak
08:13:43+ rm etc/omero.properties
08:13:43+ touch etc/omero.properties
08:13:43++ sed -n '/Internal dependencies/=' etc/omero.properties.bak
08:13:43+ ne=249
08:13:43++ sed -n 1,249p etc/omero.properties.bak
08:13:43+ line='##
08:13:43## omero.properties
08:13:43## ----------------
08:13:43##
08:13:43## DO NOT EDIT!
08:13:43##
08:13:43##
08:13:43## Any of these properties can be altered by using `omero config`. MODIFYING
08:13:43## THIS FILE DOES NOT ALTER SERVER BEHAVIOR. It solely defines the defaults
08:13:43## at compile time!
08:13:43##
08:13:43## For an overview of these properties, see
08:13:43## https://docs.openmicroscopy.org/latest/omero/sysadmins/config.html08:13:43##
08:13:43## Properties marked with "DEVELOPMENT" should not be used in production.
08:13:4308:13:43# Comma separated list of Ice transports available to clients. The default
08:13:43# value ("ssl,tcp") instructs Ice to open the ports specified by the
08:13:43# omero.ports.ssl and omero.ports.tcp properties. Restricting to "ssl"
08:13:43# will prevent all non-encrypted connections to the OMERO server.
08:13:43#
08:13:43# Additionally, there are two experimental values for using websockets:
08:13:43# "ws" and "wss" for unencrypted and encrypted, respectively. The ports
08:13:43# that are opened are controlled by the omero.ports.ws and omero.ports.wss
08:13:43# properties. To enable all possible protocols use: "ssl,tcp,wss,ws".
08:13:43#
08:13:43# Note: When using websockets behind a web server like nginx, additional
08:13:43# configuration may be needed.
08:13:43omero.client.icetransports=ssl,tcp
08:13:4308:13:43# The prefix to apply to all port numbers (SSL, TCP, registry) used by the
08:13:43# server
08:13:43omero.ports.prefix=
08:13:4308:13:43# The Glacier2 SSL port number to use
08:13:43omero.ports.ssl=4064
08:13:4308:13:43# The Glacier2 TCP port number to use (unencrypted)
08:13:43omero.ports.tcp=4063
08:13:4308:13:43# The Glacier2 WSS port number to use
08:13:43omero.ports.wss=4066
08:13:4308:13:43# The Glacier2 WS port number to use (unencrypted)
08:13:43omero.ports.ws=4065
08:13:4308:13:43# The IceGrid registry port number to use
08:13:43omero.ports.registry=4061
08:13:4308:13:43#############################################
08:13:43## JVM configuration
08:13:43##
08:13:43## Note: changes to the omero.jvmcfg properties
08:13:43## will *not* be reflected in OMERO.server
08:13:43## since they are defined in OMERO.py.
08:13:43#############################################
08:13:43## (For documentation only)
08:13:43# Memory strategy which will be used by default.
08:13:43# Options include: percent, manual
08:13:43omero.jvmcfg.strategy=percent
08:13:4308:13:43## (For documentation only)
08:13:43# Explicit value for the `-Xmx` argument, e.g.
08:13:43# "1g"
08:13:43omero.jvmcfg.heap_size=
08:13:4308:13:43## (For documentation only)
08:13:43# Explicit value for the MaxPermSize argument
08:13:43# to the JVM, e.g. "500M". Ignored for Java8+
08:13:43omero.jvmcfg.perm_gen=
08:13:4308:13:43## (For documentation only)
08:13:43# Toggles on or off heap dumps on OOMs. Default is "off".
08:13:43# The special value "tmp" will create the heap dumps in
08:13:43# your temp directory.
08:13:43omero.jvmcfg.heap_dump=
08:13:4308:13:43## (For documentation only)
08:13:43# Used only by the percent strategy. An integer between 0
08:13:43# and 100 which is the percent of active memory that will
08:13:43# be used by the service.
08:13:43omero.jvmcfg.percent=
08:13:4308:13:43## (For documentation only)
08:13:43# Contains other parameters which should be passed to the
08:13:43# JVM. The value of "append" is treated as if it were on
08:13:43# the command line so will be separated on whitespace.
08:13:43# For example, '\''-XX:-PrintGC -XX:+UseCompressedOops'\'' would
08:13:43# results in two new arguments.
08:13:43# Note that when using `config set` from the command line
08:13:43# one may need to give a prior `--` option to prevent a value
08:13:43# starting with `-` from already being parsed as an option,
08:13:43# and values may need quoting to prevent whitespace or other
08:13:43# significant characters from being interpreted prematurely.
08:13:4308:13:43omero.jvmcfg.append=
08:13:4308:13:43## (For documentation only)
08:13:43# Manual override of the total system memory that
08:13:43# OMERO will *think* is present on the local OS (MB).
08:13:43# If unset, an attempt will be made to detect the actual
08:13:43# amount: first by using the Python library `psutil` and
08:13:43# if that is not installed, by running a Java tool. If
08:13:43# neither works, 4.0GB is assumed.
08:13:43omero.jvmcfg.system_memory=
08:13:4308:13:43## (For documentation only)
08:13:43# Suggestion for strategies as to the minimum memory
08:13:43# that they will use for calculating JVM settings (MB).
08:13:43omero.jvmcfg.min_system_memory=3414
08:13:4308:13:43## (For documentation only)
08:13:43# Suggestion for strategies as to the maximum memory
08:13:43# that they will use for calculating JVM settings (MB).
08:13:43omero.jvmcfg.max_system_memory=48000
08:13:4308:13:4308:13:43#############################################
08:13:43## Logging properties
08:13:43##
08:13:43## Note: changes to the default omero.logging values in
08:13:43## this file will *not* be reflected in OMERO.server
08:13:43## since they are defined in OMERO.py
08:13:43#############################################
08:13:4308:13:43## (For documentation only)
08:13:43# Relative server directory where the log files should be stored.
08:13:43omero.logging.directory=var/log/
08:13:4308:13:43## (For documentation only)
08:13:43# Whether the server log files should be rotated at a certain time
08:13:43# interval. If true, log files will be rolled over at midnight.
08:13:43# Otherwise, log files will be rolled over at a predetermined size,
08:13:43# see omero.logging.logsize for more information.
08:13:43omero.logging.timedlog=false
08:13:4308:13:43## (For documentation only)
08:13:43# If omero.logging.timedlog is false or unset, specifies the
08:13:43# maximum size of the server log files in bytes above which a
08:13:43# new log file should be created.
08:13:43omero.logging.logsize=5000000
08:13:4308:13:43## (For documentation only)
08:13:43# If omero.logging.timedlog is false or unset, specifies the
08:13:43# number of old server log files that should be kept. Old log
08:13:43# files will be saved by appending the extensions '\''.1'\'', '\''.2'\'' etc.
08:13:43omero.logging.lognum=9
08:13:4308:13:43## (For documentation only)
08:13:43# Specifies the threshold for the Python servers log files. Logging messages
08:13:43# which are less severe than this value will be ignored. For a list of
08:13:43# available values, see https://docs.python.org/3/library/logging.html#levels.
08:13:43omero.logging.level=20
08:13:4308:13:43#############################################
08:13:43## Ice overrides
08:13:43##
08:13:43## Though not used directly by OMERO, a number
08:13:43## of properties prefixed with "Ice.*" will
08:13:43## alter the behavior of the OMERO runtime
08:13:43## by configuring the Ice communicators. For a
08:13:43## full listing see:
08:13:43##
08:13:43## http://doc.zeroc.com/display/Ice/Property+Reference08:13:43## For more information see
08:13:43## https://docs.openmicroscopy.org/latest/omero/sysadmins/troubleshooting.html#server-fails-to-start08:13:43#############################################
08:13:4308:13:43# Disable IPv6 by setting to 0. Only needed in
08:13:43# certain situations.
08:13:43Ice.IPv6=1
08:13:4308:13:43# Glacier2Template IceSSL defaults and overrides,
08:13:43# see https://archive.zeroc.com/ice/3.6/property-reference/icessl.
08:13:43# Any property beginning ``omero.glacier2.IceSSL.`` will be used to
08:13:43# update the corresponding IceSSL. property.
08:13:43omero.glacier2.IceSSL=
08:13:4308:13:43# Glacier2Template SSL maximum allowed protocol (mac bug)
08:13:43omero.glacier2.IceSSL.ProtocolVersionMax=tls1_1
08:13:43# Glacier2Template SSL allowed cipher suites
08:13:43omero.glacier2.IceSSL.Ciphers=ADH:!LOW:!MD5:!EXP:!3DES:@STRENGTH
08:13:43# Glacier2Template SSL verification requirements
08:13:43omero.glacier2.IceSSL.VerifyPeer=0
08:13:43# Glacier2Template SSL allowed protocols
08:13:43omero.glacier2.IceSSL.Protocols=tls1
08:13:4308:13:43# Override the default set of OMERO services.
08:13:43# For example, to run OMERO.server with Blitz and Tables only
08:13:43# (i.e. disable Processor, DropBox, Indexer, PixelData)
08:13:43# set this to ``master:Blitz-0,Tables-0``.
08:13:43# Also use this to distribute OMERO services across multiple nodes,
08:13:43# for example:
08:13:43# ``master:Blitz-0,Tables-0 worker1:Processor-0``.
08:13:43# See
08:13:43# https://docs.openmicroscopy.org/omero/latest/sysadmins/grid.html#deployment-examples08:13:43omero.server.nodedescriptors=
08:13:4308:13:43#############################################
08:13:43## Darwin (OS X) specific defaults for templated configuration files only.
08:13:43## ``_xxx.yyy.darwin`` properties will override xxx.yyy properties in this
08:13:43## file.
08:13:43## Do not set these properties in ``omero config``, instead set the original
08:13:43## ``xxx.yyy`` property
08:13:43#############################################
08:13:43_omero.glacier2.IceSSL.Ciphers.darwin=(AES)
08:13:4308:13:43## (For documentation only)
08:13:43# Name of the Python module to use when starting the Tables service
08:13:43omero.tables.module=runTables
08:13:4308:13:43#############################################
08:13:43## Server product name for release artifacts
08:13:43#############################################
08:13:43product.name=OMERO.server
08:13:4308:13:43#############################################
08:13:43### Properties below this marker are ignored by
08:13:43### omero.install.config_parser.PropertyParser
08:13:43### END
08:13:4308:13:43#############################################
08:13:43## Library versions
08:13:43#############################################
08:13:43##
08:13:43versions.findbugs=1.2.1
08:13:43versions.ice36=3.6.5
08:13:43versions.ice36_lib=36
08:13:43## internal
08:13:43versions.omeroshares36=3.6.3
08:13:43versions.omeromock36=3.6.3
08:13:43versions.icedb36=3.6.3
08:13:43versions.ipython=1.2.1
08:13:4308:13:43versions.janino=2.5.10
08:13:4308:13:43versions.reportng=1.1.1
08:13:4308:13:43versions.testng=7.5
08:13:43versions.velocity=1.4
08:13:4308:13:43versions.omero-pypi=https://pypi.io/packages/source/o/PACKAGE08:13:43versions.omero-scripts-url=${versions.omero-pypi}
08:13:4308:13:43###
08:13:43### Appended Values
08:13:43###
08:13:4308:13:43## Internal dependencies'
08:13:43+ echo '##
08:13:43## omero.properties
08:13:43## ----------------
08:13:43##
08:13:43## DO NOT EDIT!
08:13:43##
08:13:43##
08:13:43## Any of these properties can be altered by using `omero config`. MODIFYING
08:13:43## THIS FILE DOES NOT ALTER SERVER BEHAVIOR. It solely defines the defaults
08:13:43## at compile time!
08:13:43##
08:13:43## For an overview of these properties, see
08:13:43## https://docs.openmicroscopy.org/latest/omero/sysadmins/config.html08:13:43##
08:13:43## Properties marked with "DEVELOPMENT" should not be used in production.
08:13:4308:13:43# Comma separated list of Ice transports available to clients. The default
08:13:43# value ("ssl,tcp") instructs Ice to open the ports specified by the
08:13:43# omero.ports.ssl and omero.ports.tcp properties. Restricting to "ssl"
08:13:43# will prevent all non-encrypted connections to the OMERO server.
08:13:43#
08:13:43# Additionally, there are two experimental values for using websockets:
08:13:43# "ws" and "wss" for unencrypted and encrypted, respectively. The ports
08:13:43# that are opened are controlled by the omero.ports.ws and omero.ports.wss
08:13:43# properties. To enable all possible protocols use: "ssl,tcp,wss,ws".
08:13:43#
08:13:43# Note: When using websockets behind a web server like nginx, additional
08:13:43# configuration may be needed.
08:13:43omero.client.icetransports=ssl,tcp
08:13:4308:13:43# The prefix to apply to all port numbers (SSL, TCP, registry) used by the
08:13:43# server
08:13:43omero.ports.prefix=
08:13:4308:13:43# The Glacier2 SSL port number to use
08:13:43omero.ports.ssl=4064
08:13:4308:13:43# The Glacier2 TCP port number to use (unencrypted)
08:13:43omero.ports.tcp=4063
08:13:4308:13:43# The Glacier2 WSS port number to use
08:13:43omero.ports.wss=4066
08:13:4308:13:43# The Glacier2 WS port number to use (unencrypted)
08:13:43omero.ports.ws=4065
08:13:4308:13:43# The IceGrid registry port number to use
08:13:43omero.ports.registry=4061
08:13:4308:13:43#############################################
08:13:43## JVM configuration
08:13:43##
08:13:43## Note: changes to the omero.jvmcfg properties
08:13:43## will *not* be reflected in OMERO.server
08:13:43## since they are defined in OMERO.py.
08:13:43#############################################
08:13:43## (For documentation only)
08:13:43# Memory strategy which will be used by default.
08:13:43# Options include: percent, manual
08:13:43omero.jvmcfg.strategy=percent
08:13:4308:13:43## (For documentation only)
08:13:43# Explicit value for the `-Xmx` argument, e.g.
08:13:43# "1g"
08:13:43omero.jvmcfg.heap_size=
08:13:4308:13:43## (For documentation only)
08:13:43# Explicit value for the MaxPermSize argument
08:13:43# to the JVM, e.g. "500M". Ignored for Java8+
08:13:43omero.jvmcfg.perm_gen=
08:13:4308:13:43## (For documentation only)
08:13:43# Toggles on or off heap dumps on OOMs. Default is "off".
08:13:43# The special value "tmp" will create the heap dumps in
08:13:43# your temp directory.
08:13:43omero.jvmcfg.heap_dump=
08:13:4308:13:43## (For documentation only)
08:13:43# Used only by the percent strategy. An integer between 0
08:13:43# and 100 which is the percent of active memory that will
08:13:43# be used by the service.
08:13:43omero.jvmcfg.percent=
08:13:4308:13:43## (For documentation only)
08:13:43# Contains other parameters which should be passed to the
08:13:43# JVM. The value of "append" is treated as if it were on
08:13:43# the command line so will be separated on whitespace.
08:13:43# For example, '\''-XX:-PrintGC -XX:+UseCompressedOops'\'' would
08:13:43# results in two new arguments.
08:13:43# Note that when using `config set` from the command line
08:13:43# one may need to give a prior `--` option to prevent a value
08:13:43# starting with `-` from already being parsed as an option,
08:13:43# and values may need quoting to prevent whitespace or other
08:13:43# significant characters from being interpreted prematurely.
08:13:4308:13:43omero.jvmcfg.append=
08:13:4308:13:43## (For documentation only)
08:13:43# Manual override of the total system memory that
08:13:43# OMERO will *think* is present on the local OS (MB).
08:13:43# If unset, an attempt will be made to detect the actual
08:13:43# amount: first by using the Python library `psutil` and
08:13:43# if that is not installed, by running a Java tool. If
08:13:43# neither works, 4.0GB is assumed.
08:13:43omero.jvmcfg.system_memory=
08:13:4308:13:43## (For documentation only)
08:13:43# Suggestion for strategies as to the minimum memory
08:13:43# that they will use for calculating JVM settings (MB).
08:13:43omero.jvmcfg.min_system_memory=3414
08:13:4308:13:43## (For documentation only)
08:13:43# Suggestion for strategies as to the maximum memory
08:13:43# that they will use for calculating JVM settings (MB).
08:13:43omero.jvmcfg.max_system_memory=48000
08:13:4308:13:4308:13:43#############################################
08:13:43## Logging properties
08:13:43##
08:13:43## Note: changes to the default omero.logging values in
08:13:43## this file will *not* be reflected in OMERO.server
08:13:43## since they are defined in OMERO.py
08:13:43#############################################
08:13:4308:13:43## (For documentation only)
08:13:43# Relative server directory where the log files should be stored.
08:13:43omero.logging.directory=var/log/
08:13:4308:13:43## (For documentation only)
08:13:43# Whether the server log files should be rotated at a certain time
08:13:43# interval. If true, log files will be rolled over at midnight.
08:13:43# Otherwise, log files will be rolled over at a predetermined size,
08:13:43# see omero.logging.logsize for more information.
08:13:43omero.logging.timedlog=false
08:13:4308:13:43## (For documentation only)
08:13:43# If omero.logging.timedlog is false or unset, specifies the
08:13:43# maximum size of the server log files in bytes above which a
08:13:43# new log file should be created.
08:13:43omero.logging.logsize=5000000
08:13:4308:13:43## (For documentation only)
08:13:43# If omero.logging.timedlog is false or unset, specifies the
08:13:43# number of old server log files that should be kept. Old log
08:13:43# files will be saved by appending the extensions '\''.1'\'', '\''.2'\'' etc.
08:13:43omero.logging.lognum=9
08:13:4308:13:43## (For documentation only)
08:13:43# Specifies the threshold for the Python servers log files. Logging messages
08:13:43# which are less severe than this value will be ignored. For a list of
08:13:43# available values, see https://docs.python.org/3/library/logging.html#levels.
08:13:43omero.logging.level=20
08:13:4308:13:43#############################################
08:13:43## Ice overrides
08:13:43##
08:13:43## Though not used directly by OMERO, a number
08:13:43## of properties prefixed with "Ice.*" will
08:13:43## alter the behavior of the OMERO runtime
08:13:43## by configuring the Ice communicators. For a
08:13:43## full listing see:
08:13:43##
08:13:43## http://doc.zeroc.com/display/Ice/Property+Reference08:13:43## For more information see
08:13:43## https://docs.openmicroscopy.org/latest/omero/sysadmins/troubleshooting.html#server-fails-to-start08:13:43#############################################
08:13:4308:13:43# Disable IPv6 by setting to 0. Only needed in
08:13:43# certain situations.
08:13:43Ice.IPv6=1
08:13:4308:13:43# Glacier2Template IceSSL defaults and overrides,
08:13:43# see https://archive.zeroc.com/ice/3.6/property-reference/icessl.
08:13:43# Any property beginning ``omero.glacier2.IceSSL.`` will be used to
08:13:43# update the corresponding IceSSL. property.
08:13:43omero.glacier2.IceSSL=
08:13:4308:13:43# Glacier2Template SSL maximum allowed protocol (mac bug)
08:13:43omero.glacier2.IceSSL.ProtocolVersionMax=tls1_1
08:13:43# Glacier2Template SSL allowed cipher suites
08:13:43omero.glacier2.IceSSL.Ciphers=ADH:!LOW:!MD5:!EXP:!3DES:@STRENGTH
08:13:43# Glacier2Template SSL verification requirements
08:13:43omero.glacier2.IceSSL.VerifyPeer=0
08:13:43# Glacier2Template SSL allowed protocols
08:13:43omero.glacier2.IceSSL.Protocols=tls1
08:13:4308:13:43# Override the default set of OMERO services.
08:13:43# For example, to run OMERO.server with Blitz and Tables only
08:13:43# (i.e. disable Processor, DropBox, Indexer, PixelData)
08:13:43# set this to ``master:Blitz-0,Tables-0``.
08:13:43# Also use this to distribute OMERO services across multiple nodes,
08:13:43# for example:
08:13:43# ``master:Blitz-0,Tables-0 worker1:Processor-0``.
08:13:43# See
08:13:43# https://docs.openmicroscopy.org/omero/latest/sysadmins/grid.html#deployment-examples08:13:43omero.server.nodedescriptors=
08:13:4308:13:43#############################################
08:13:43## Darwin (OS X) specific defaults for templated configuration files only.
08:13:43## ``_xxx.yyy.darwin`` properties will override xxx.yyy properties in this
08:13:43## file.
08:13:43## Do not set these properties in ``omero config``, instead set the original
08:13:43## ``xxx.yyy`` property
08:13:43#############################################
08:13:43_omero.glacier2.IceSSL.Ciphers.darwin=(AES)
08:13:4308:13:43## (For documentation only)
08:13:43# Name of the Python module to use when starting the Tables service
08:13:43omero.tables.module=runTables
08:13:4308:13:43#############################################
08:13:43## Server product name for release artifacts
08:13:43#############################################
08:13:43product.name=OMERO.server
08:13:4308:13:43#############################################
08:13:43### Properties below this marker are ignored by
08:13:43### omero.install.config_parser.PropertyParser
08:13:43### END
08:13:4308:13:43#############################################
08:13:43## Library versions
08:13:43#############################################
08:13:43##
08:13:43versions.findbugs=1.2.1
08:13:43versions.ice36=3.6.5
08:13:43versions.ice36_lib=36
08:13:43## internal
08:13:43versions.omeroshares36=3.6.3
08:13:43versions.omeromock36=3.6.3
08:13:43versions.icedb36=3.6.3
08:13:43versions.ipython=1.2.1
08:13:4308:13:43versions.janino=2.5.10
08:13:4308:13:43versions.reportng=1.1.1
08:13:4308:13:43versions.testng=7.5
08:13:43versions.velocity=1.4
08:13:4308:13:43versions.omero-pypi=https://pypi.io/packages/source/o/PACKAGE08:13:43versions.omero-scripts-url=${versions.omero-pypi}
08:13:4308:13:43###
08:13:43### Appended Values
08:13:43###
08:13:4308:13:43## Internal dependencies'
08:13:43+ echo versions.omero-pypi=https://merge-ci.openmicroscopy.org/jenkins//job/OMERO-python-superbuild-build/lastSuccessfulBuild/artifact/PACKAGE/dist/08:13:43+ echo versions.omero-github=https://github.com/snoopycrimecop/PACKAGE/archive08:13:43+ echo versions.scripts-prefix=
08:13:43+ echo versions.scripts=merge_ci
08:13:43++ curl -fsSL https://merge-ci.openmicroscopy.org/jenkins//job/OMERO-zarr-pixel-buffer-push/lastSuccessfulBuild/artifact/build/version.tsv08:13:43++ cut -f3
08:13:43+ OZPB_VERSION=0.7.2-SNAPSHOT
08:13:43+ echo versions.omero-zarr-pixel-buffer=0.7.2-SNAPSHOT
08:13:43+ cat /home/omero/workspace/OMERO-push/version.properties
08:13:43+ git commit -a -m 'Add version.properties to etc/omero.properties'
08:13:43[detached HEAD 547cc34433] Add version.properties to etc/omero.properties
08:13:43 1 file changed, 47 insertions(+), 6 deletions(-)
08:13:43+ git push -f git@github.com:snoopycrimecop/openmicroscopy.git HEAD:refs/heads/merge_ci
08:13:47To github.com:snoopycrimecop/openmicroscopy.git
08:13:47 + 4bda1c1e74...547cc34433 HEAD -> merge_ci (forced update)
08:13:47Finished: SUCCESS
