10:09:10Started by upstream project "Trigger" build number 14710:09:10originally caused by:
10:09:10 Started by user devspace10:09:10Running as SYSTEM
10:09:10Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-push
10:09:10The recommended git tool is: NONE
10:09:10No credentials specified
10:09:10 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-push/src/.git # timeout=10
10:09:10Fetching changes from the remote Git repository
10:09:10 > git config remote.origin.url https://github.com/ome/openmicroscopy.git # timeout=10
10:09:10Fetching upstream changes from https://github.com/ome/openmicroscopy.git10:09:10 > git --version # timeout=10
10:09:10 > git --version # 'git version 2.47.3'
10:09:10 > git fetch --tags --force --progress -- https://github.com/ome/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
10:09:10 > git rev-parse origin/develop^{commit} # timeout=10
10:09:10Checking out Revision fe46b79639396fd7473d874736918c245c8a7024 (origin/develop)
10:09:10 > git config core.sparsecheckout # timeout=10
10:09:10 > git checkout -f fe46b79639396fd7473d874736918c245c8a7024 # timeout=30
10:09:10Commit message: "Merge pull request #6447 from sbesson/OMERO.server_5.6.17_release_notes"
10:09:10 > git rev-list --no-walk fe46b79639396fd7473d874736918c245c8a7024 # timeout=10
10:09:10Cleaning workspace
10:09:10 > git rev-parse --verify HEAD # timeout=10
10:09:10Resetting working tree
10:09:10 > git reset --hard # timeout=10
10:09:10 > git clean -fdx # timeout=10
10:09:10Copied 1 artifact from "OMERO-python-superbuild-build" build number 11010:09:10[OMERO-push] $ /bin/bash -xe /tmp/jenkins10104060442116245868.sh
10:09:10+ python3.11 -mvenv venv
10:09:12+ source /home/omero/workspace/OMERO-push/venv/bin/activate
10:09:12++ deactivate nondestructive
10:09:12++ '[' -n '' ']'
10:09:12++ '[' -n '' ']'
10:09:12++ hash -r
10:09:12++ '[' -n '' ']'
10:09:12++ unset VIRTUAL_ENV
10:09:12++ unset VIRTUAL_ENV_PROMPT
10:09:12++ '[' '!' nondestructive = nondestructive ']'
10:09:12++ VIRTUAL_ENV=/home/omero/workspace/OMERO-push/venv
10:09:12++ export VIRTUAL_ENV
10:09:12++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
10:09:12++ PATH=/home/omero/workspace/OMERO-push/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
10:09:12++ export PATH
10:09:12++ '[' -n '' ']'
10:09:12++ '[' -z '' ']'
10:09:12++ _OLD_VIRTUAL_PS1=
10:09:12++ PS1='(venv) '
10:09:12++ export PS1
10:09:12++ VIRTUAL_ENV_PROMPT='(venv) '
10:09:12++ export VIRTUAL_ENV_PROMPT
10:09:12++ hash -r
10:09:12+ pip install -U pip
10:09:13Requirement already satisfied: pip in ./venv/lib64/python3.11/site-packages (26.0.1)
10:09:13+ pip install -U scc
10:09:13Requirement already satisfied: scc in ./venv/lib64/python3.11/site-packages (0.20.0)
10:09:13Requirement already satisfied: PyGithub>=1.54 in ./venv/lib64/python3.11/site-packages (from scc) (2.8.1)
10:09:13Requirement already satisfied: PyYAML>=5.1 in ./venv/lib64/python3.11/site-packages (from scc) (6.0.3)
10:09:13Requirement already satisfied: future in ./venv/lib64/python3.11/site-packages (from scc) (1.0.0)
10:09:13Requirement already satisfied: ruamel.yaml in ./venv/lib64/python3.11/site-packages (from scc) (0.18.17)
10:09:13Requirement already satisfied: ruamel.yaml.jinja2 in ./venv/lib64/python3.11/site-packages (from scc) (0.2.7)
10:09:13Requirement already satisfied: six in ./venv/lib64/python3.11/site-packages (from scc) (1.17.0)
10:09:13Requirement already satisfied: urllib3<2 in ./venv/lib64/python3.11/site-packages (from scc) (1.26.20)
10:09:13Requirement already satisfied: yaclifw<0.3,>=0.2.0 in ./venv/lib64/python3.11/site-packages (from scc) (0.2.0)
10:09:13Requirement already satisfied: pynacl>=1.4.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (1.6.1)
10:09:13Requirement already satisfied: requests>=2.14.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (2.32.5)
10:09:13Requirement already satisfied: pyjwt>=2.4.0 in ./venv/lib64/python3.11/site-packages (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (2.10.1)
10:09:13Requirement already satisfied: typing-extensions>=4.5.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (4.15.0)
10:09:13Requirement already satisfied: cryptography>=3.4.0 in ./venv/lib64/python3.11/site-packages (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (46.0.3)
10:09:13Requirement already satisfied: cffi>=2.0.0 in ./venv/lib64/python3.11/site-packages (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (2.0.0)
10:09:13Requirement already satisfied: pycparser in ./venv/lib64/python3.11/site-packages (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (2.23)
10:09:13Requirement already satisfied: charset_normalizer<4,>=2 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (3.4.4)
10:09:13Requirement already satisfied: idna<4,>=2.5 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (3.11)
10:09:13Requirement already satisfied: certifi>=2017.4.17 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (2025.11.12)
10:09:13Requirement already satisfied: ruamel.yaml.clib>=0.2.15 in ./venv/lib64/python3.11/site-packages (from ruamel.yaml->scc) (0.2.15)
10:09:13+ test -e src
10:09:13+ cd src
10:09:13++ git config github.user
10:09:13+ user=snoopycrimecop
10:09:13+ scc merge develop --no-ask --reset --shallow -S success-only
10:09:172026-04-15 10:09:17,616 [ scc.merge] INFO Merging Pull Request(s) based on develop
10:09:172026-04-15 10:09:17,616 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
10:09:172026-04-15 10:09:17,616 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
10:09:172026-04-15 10:09:17,617 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
10:09:172026-04-15 10:09:17,617 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
10:09:172026-04-15 10:09:17,617 [ scc.merge] INFO Excluding Pull Request(s) without successful status
10:09:272026-04-15 10:09:27,220 [ scc.merge] INFO Repository: ome/openmicroscopy
10:09:272026-04-15 10:09:27,220 [ scc.merge] INFO Excluded PRs:
10:09:272026-04-15 10:09:27,220 [ scc.merge] INFO - PR 6423 jburel 'Use \d' (status: failure)
10:09:272026-04-15 10:09:27,220 [ scc.merge] INFO - PR 6212 jburel 'add test to import images' (exclude comment)
10:09:272026-04-15 10:09:27,220 [ scc.merge] INFO Already up to date.
10:09:272026-04-15 10:09:27,220 [ scc.merge] INFO
10:09:272026-04-15 10:09:27,220 [ scc.merge] INFO Merged PRs:
10:09:272026-04-15 10:09:27,220 [ scc.merge] INFO - PR 6450 dominikl 'Add omero-zarr-pixel-buffer'
10:09:272026-04-15 10:09:27,220 [ scc.merge] INFO
10:09:27+ cp etc/omero.properties etc/omero.properties.bak
10:09:27+ rm etc/omero.properties
10:09:27+ touch etc/omero.properties
10:09:27++ sed -n '/Internal dependencies/=' etc/omero.properties.bak
10:09:27+ ne=249
10:09:27++ sed -n 1,249p etc/omero.properties.bak
10:09:27+ line='##
10:09:27## omero.properties
10:09:27## ----------------
10:09:27##
10:09:27## DO NOT EDIT!
10:09:27##
10:09:27##
10:09:27## Any of these properties can be altered by using `omero config`. MODIFYING
10:09:27## THIS FILE DOES NOT ALTER SERVER BEHAVIOR. It solely defines the defaults
10:09:27## at compile time!
10:09:27##
10:09:27## For an overview of these properties, see
10:09:27## https://docs.openmicroscopy.org/latest/omero/sysadmins/config.html10:09:27##
10:09:27## Properties marked with "DEVELOPMENT" should not be used in production.
10:09:2710:09:27# Comma separated list of Ice transports available to clients. The default
10:09:27# value ("ssl,tcp") instructs Ice to open the ports specified by the
10:09:27# omero.ports.ssl and omero.ports.tcp properties. Restricting to "ssl"
10:09:27# will prevent all non-encrypted connections to the OMERO server.
10:09:27#
10:09:27# Additionally, there are two experimental values for using websockets:
10:09:27# "ws" and "wss" for unencrypted and encrypted, respectively. The ports
10:09:27# that are opened are controlled by the omero.ports.ws and omero.ports.wss
10:09:27# properties. To enable all possible protocols use: "ssl,tcp,wss,ws".
10:09:27#
10:09:27# Note: When using websockets behind a web server like nginx, additional
10:09:27# configuration may be needed.
10:09:27omero.client.icetransports=ssl,tcp
10:09:2710:09:27# The prefix to apply to all port numbers (SSL, TCP, registry) used by the
10:09:27# server
10:09:27omero.ports.prefix=
10:09:2710:09:27# The Glacier2 SSL port number to use
10:09:27omero.ports.ssl=4064
10:09:2710:09:27# The Glacier2 TCP port number to use (unencrypted)
10:09:27omero.ports.tcp=4063
10:09:2710:09:27# The Glacier2 WSS port number to use
10:09:27omero.ports.wss=4066
10:09:2710:09:27# The Glacier2 WS port number to use (unencrypted)
10:09:27omero.ports.ws=4065
10:09:2710:09:27# The IceGrid registry port number to use
10:09:27omero.ports.registry=4061
10:09:2710:09:27#############################################
10:09:27## JVM configuration
10:09:27##
10:09:27## Note: changes to the omero.jvmcfg properties
10:09:27## will *not* be reflected in OMERO.server
10:09:27## since they are defined in OMERO.py.
10:09:27#############################################
10:09:27## (For documentation only)
10:09:27# Memory strategy which will be used by default.
10:09:27# Options include: percent, manual
10:09:27omero.jvmcfg.strategy=percent
10:09:2710:09:27## (For documentation only)
10:09:27# Explicit value for the `-Xmx` argument, e.g.
10:09:27# "1g"
10:09:27omero.jvmcfg.heap_size=
10:09:2710:09:27## (For documentation only)
10:09:27# Explicit value for the MaxPermSize argument
10:09:27# to the JVM, e.g. "500M". Ignored for Java8+
10:09:27omero.jvmcfg.perm_gen=
10:09:2710:09:27## (For documentation only)
10:09:27# Toggles on or off heap dumps on OOMs. Default is "off".
10:09:27# The special value "tmp" will create the heap dumps in
10:09:27# your temp directory.
10:09:27omero.jvmcfg.heap_dump=
10:09:2710:09:27## (For documentation only)
10:09:27# Used only by the percent strategy. An integer between 0
10:09:27# and 100 which is the percent of active memory that will
10:09:27# be used by the service.
10:09:27omero.jvmcfg.percent=
10:09:2710:09:27## (For documentation only)
10:09:27# Contains other parameters which should be passed to the
10:09:27# JVM. The value of "append" is treated as if it were on
10:09:27# the command line so will be separated on whitespace.
10:09:27# For example, '\''-XX:-PrintGC -XX:+UseCompressedOops'\'' would
10:09:27# results in two new arguments.
10:09:27# Note that when using `config set` from the command line
10:09:27# one may need to give a prior `--` option to prevent a value
10:09:27# starting with `-` from already being parsed as an option,
10:09:27# and values may need quoting to prevent whitespace or other
10:09:27# significant characters from being interpreted prematurely.
10:09:2710:09:27omero.jvmcfg.append=
10:09:2710:09:27## (For documentation only)
10:09:27# Manual override of the total system memory that
10:09:27# OMERO will *think* is present on the local OS (MB).
10:09:27# If unset, an attempt will be made to detect the actual
10:09:27# amount: first by using the Python library `psutil` and
10:09:27# if that is not installed, by running a Java tool. If
10:09:27# neither works, 4.0GB is assumed.
10:09:27omero.jvmcfg.system_memory=
10:09:2710:09:27## (For documentation only)
10:09:27# Suggestion for strategies as to the minimum memory
10:09:27# that they will use for calculating JVM settings (MB).
10:09:27omero.jvmcfg.min_system_memory=3414
10:09:2710:09:27## (For documentation only)
10:09:27# Suggestion for strategies as to the maximum memory
10:09:27# that they will use for calculating JVM settings (MB).
10:09:27omero.jvmcfg.max_system_memory=48000
10:09:2710:09:2710:09:27#############################################
10:09:27## Logging properties
10:09:27##
10:09:27## Note: changes to the default omero.logging values in
10:09:27## this file will *not* be reflected in OMERO.server
10:09:27## since they are defined in OMERO.py
10:09:27#############################################
10:09:2710:09:27## (For documentation only)
10:09:27# Relative server directory where the log files should be stored.
10:09:27omero.logging.directory=var/log/
10:09:2710:09:27## (For documentation only)
10:09:27# Whether the server log files should be rotated at a certain time
10:09:27# interval. If true, log files will be rolled over at midnight.
10:09:27# Otherwise, log files will be rolled over at a predetermined size,
10:09:27# see omero.logging.logsize for more information.
10:09:27omero.logging.timedlog=false
10:09:2710:09:27## (For documentation only)
10:09:27# If omero.logging.timedlog is false or unset, specifies the
10:09:27# maximum size of the server log files in bytes above which a
10:09:27# new log file should be created.
10:09:27omero.logging.logsize=5000000
10:09:2710:09:27## (For documentation only)
10:09:27# If omero.logging.timedlog is false or unset, specifies the
10:09:27# number of old server log files that should be kept. Old log
10:09:27# files will be saved by appending the extensions '\''.1'\'', '\''.2'\'' etc.
10:09:27omero.logging.lognum=9
10:09:2710:09:27## (For documentation only)
10:09:27# Specifies the threshold for the Python servers log files. Logging messages
10:09:27# which are less severe than this value will be ignored. For a list of
10:09:27# available values, see https://docs.python.org/3/library/logging.html#levels.
10:09:27omero.logging.level=20
10:09:2710:09:27#############################################
10:09:27## Ice overrides
10:09:27##
10:09:27## Though not used directly by OMERO, a number
10:09:27## of properties prefixed with "Ice.*" will
10:09:27## alter the behavior of the OMERO runtime
10:09:27## by configuring the Ice communicators. For a
10:09:27## full listing see:
10:09:27##
10:09:27## http://doc.zeroc.com/display/Ice/Property+Reference10:09:27## For more information see
10:09:27## https://docs.openmicroscopy.org/latest/omero/sysadmins/troubleshooting.html#server-fails-to-start10:09:27#############################################
10:09:2710:09:27# Disable IPv6 by setting to 0. Only needed in
10:09:27# certain situations.
10:09:27Ice.IPv6=1
10:09:2710:09:27# Glacier2Template IceSSL defaults and overrides,
10:09:27# see https://doc.zeroc.com/ice/3.6/property-reference/icessl.
10:09:27# Any property beginning ``omero.glacier2.IceSSL.`` will be used to
10:09:27# update the corresponding IceSSL. property.
10:09:27omero.glacier2.IceSSL=
10:09:2710:09:27# Glacier2Template SSL maximum allowed protocol (mac bug)
10:09:27omero.glacier2.IceSSL.ProtocolVersionMax=tls1_1
10:09:27# Glacier2Template SSL allowed cipher suites
10:09:27omero.glacier2.IceSSL.Ciphers=ADH:!LOW:!MD5:!EXP:!3DES:@STRENGTH
10:09:27# Glacier2Template SSL verification requirements
10:09:27omero.glacier2.IceSSL.VerifyPeer=0
10:09:27# Glacier2Template SSL allowed protocols
10:09:27omero.glacier2.IceSSL.Protocols=tls1
10:09:2710:09:27# Override the default set of OMERO services.
10:09:27# For example, to run OMERO.server with Blitz and Tables only
10:09:27# (i.e. disable Processor, DropBox, Indexer, PixelData)
10:09:27# set this to ``master:Blitz-0,Tables-0``.
10:09:27# Also use this to distribute OMERO services across multiple nodes,
10:09:27# for example:
10:09:27# ``master:Blitz-0,Tables-0 worker1:Processor-0``.
10:09:27# See
10:09:27# https://docs.openmicroscopy.org/omero/latest/sysadmins/grid.html#deployment-examples10:09:27omero.server.nodedescriptors=
10:09:2710:09:27#############################################
10:09:27## Darwin (OS X) specific defaults for templated configuration files only.
10:09:27## ``_xxx.yyy.darwin`` properties will override xxx.yyy properties in this
10:09:27## file.
10:09:27## Do not set these properties in ``omero config``, instead set the original
10:09:27## ``xxx.yyy`` property
10:09:27#############################################
10:09:27_omero.glacier2.IceSSL.Ciphers.darwin=(AES)
10:09:2710:09:27## (For documentation only)
10:09:27# Name of the Python module to use when starting the Tables service
10:09:27omero.tables.module=runTables
10:09:2710:09:27#############################################
10:09:27## Server product name for release artifacts
10:09:27#############################################
10:09:27product.name=OMERO.server
10:09:2710:09:27#############################################
10:09:27### Properties below this marker are ignored by
10:09:27### omero.install.config_parser.PropertyParser
10:09:27### END
10:09:2710:09:27#############################################
10:09:27## Library versions
10:09:27#############################################
10:09:27##
10:09:27versions.findbugs=1.2.1
10:09:27versions.ice36=3.6.5
10:09:27versions.ice36_lib=36
10:09:27## internal
10:09:27versions.omeroshares36=3.6.3
10:09:27versions.omeromock36=3.6.3
10:09:27versions.icedb36=3.6.3
10:09:27versions.ipython=1.2.1
10:09:2710:09:27versions.janino=2.5.10
10:09:2710:09:27versions.reportng=1.1.1
10:09:2710:09:27versions.testng=7.5
10:09:27versions.velocity=1.4
10:09:2710:09:27versions.omero-pypi=https://pypi.io/packages/source/o/PACKAGE10:09:27versions.omero-scripts-url=${versions.omero-pypi}
10:09:2710:09:27###
10:09:27### Appended Values
10:09:27###
10:09:2710:09:27## Internal dependencies'
10:09:27+ echo '##
10:09:27## omero.properties
10:09:27## ----------------
10:09:27##
10:09:27## DO NOT EDIT!
10:09:27##
10:09:27##
10:09:27## Any of these properties can be altered by using `omero config`. MODIFYING
10:09:27## THIS FILE DOES NOT ALTER SERVER BEHAVIOR. It solely defines the defaults
10:09:27## at compile time!
10:09:27##
10:09:27## For an overview of these properties, see
10:09:27## https://docs.openmicroscopy.org/latest/omero/sysadmins/config.html10:09:27##
10:09:27## Properties marked with "DEVELOPMENT" should not be used in production.
10:09:2710:09:27# Comma separated list of Ice transports available to clients. The default
10:09:27# value ("ssl,tcp") instructs Ice to open the ports specified by the
10:09:27# omero.ports.ssl and omero.ports.tcp properties. Restricting to "ssl"
10:09:27# will prevent all non-encrypted connections to the OMERO server.
10:09:27#
10:09:27# Additionally, there are two experimental values for using websockets:
10:09:27# "ws" and "wss" for unencrypted and encrypted, respectively. The ports
10:09:27# that are opened are controlled by the omero.ports.ws and omero.ports.wss
10:09:27# properties. To enable all possible protocols use: "ssl,tcp,wss,ws".
10:09:27#
10:09:27# Note: When using websockets behind a web server like nginx, additional
10:09:27# configuration may be needed.
10:09:27omero.client.icetransports=ssl,tcp
10:09:2710:09:27# The prefix to apply to all port numbers (SSL, TCP, registry) used by the
10:09:27# server
10:09:27omero.ports.prefix=
10:09:2710:09:27# The Glacier2 SSL port number to use
10:09:27omero.ports.ssl=4064
10:09:2710:09:27# The Glacier2 TCP port number to use (unencrypted)
10:09:27omero.ports.tcp=4063
10:09:2710:09:27# The Glacier2 WSS port number to use
10:09:27omero.ports.wss=4066
10:09:2710:09:27# The Glacier2 WS port number to use (unencrypted)
10:09:27omero.ports.ws=4065
10:09:2710:09:27# The IceGrid registry port number to use
10:09:27omero.ports.registry=4061
10:09:2710:09:27#############################################
10:09:27## JVM configuration
10:09:27##
10:09:27## Note: changes to the omero.jvmcfg properties
10:09:27## will *not* be reflected in OMERO.server
10:09:27## since they are defined in OMERO.py.
10:09:27#############################################
10:09:27## (For documentation only)
10:09:27# Memory strategy which will be used by default.
10:09:27# Options include: percent, manual
10:09:27omero.jvmcfg.strategy=percent
10:09:2710:09:27## (For documentation only)
10:09:27# Explicit value for the `-Xmx` argument, e.g.
10:09:27# "1g"
10:09:27omero.jvmcfg.heap_size=
10:09:2710:09:27## (For documentation only)
10:09:27# Explicit value for the MaxPermSize argument
10:09:27# to the JVM, e.g. "500M". Ignored for Java8+
10:09:27omero.jvmcfg.perm_gen=
10:09:2710:09:27## (For documentation only)
10:09:27# Toggles on or off heap dumps on OOMs. Default is "off".
10:09:27# The special value "tmp" will create the heap dumps in
10:09:27# your temp directory.
10:09:27omero.jvmcfg.heap_dump=
10:09:2710:09:27## (For documentation only)
10:09:27# Used only by the percent strategy. An integer between 0
10:09:27# and 100 which is the percent of active memory that will
10:09:27# be used by the service.
10:09:27omero.jvmcfg.percent=
10:09:2710:09:27## (For documentation only)
10:09:27# Contains other parameters which should be passed to the
10:09:27# JVM. The value of "append" is treated as if it were on
10:09:27# the command line so will be separated on whitespace.
10:09:27# For example, '\''-XX:-PrintGC -XX:+UseCompressedOops'\'' would
10:09:27# results in two new arguments.
10:09:27# Note that when using `config set` from the command line
10:09:27# one may need to give a prior `--` option to prevent a value
10:09:27# starting with `-` from already being parsed as an option,
10:09:27# and values may need quoting to prevent whitespace or other
10:09:27# significant characters from being interpreted prematurely.
10:09:2710:09:27omero.jvmcfg.append=
10:09:2710:09:27## (For documentation only)
10:09:27# Manual override of the total system memory that
10:09:27# OMERO will *think* is present on the local OS (MB).
10:09:27# If unset, an attempt will be made to detect the actual
10:09:27# amount: first by using the Python library `psutil` and
10:09:27# if that is not installed, by running a Java tool. If
10:09:27# neither works, 4.0GB is assumed.
10:09:27omero.jvmcfg.system_memory=
10:09:2710:09:27## (For documentation only)
10:09:27# Suggestion for strategies as to the minimum memory
10:09:27# that they will use for calculating JVM settings (MB).
10:09:27omero.jvmcfg.min_system_memory=3414
10:09:2710:09:27## (For documentation only)
10:09:27# Suggestion for strategies as to the maximum memory
10:09:27# that they will use for calculating JVM settings (MB).
10:09:27omero.jvmcfg.max_system_memory=48000
10:09:2710:09:2710:09:27#############################################
10:09:27## Logging properties
10:09:27##
10:09:27## Note: changes to the default omero.logging values in
10:09:27## this file will *not* be reflected in OMERO.server
10:09:27## since they are defined in OMERO.py
10:09:27#############################################
10:09:2710:09:27## (For documentation only)
10:09:27# Relative server directory where the log files should be stored.
10:09:27omero.logging.directory=var/log/
10:09:2710:09:27## (For documentation only)
10:09:27# Whether the server log files should be rotated at a certain time
10:09:27# interval. If true, log files will be rolled over at midnight.
10:09:27# Otherwise, log files will be rolled over at a predetermined size,
10:09:27# see omero.logging.logsize for more information.
10:09:27omero.logging.timedlog=false
10:09:2710:09:27## (For documentation only)
10:09:27# If omero.logging.timedlog is false or unset, specifies the
10:09:27# maximum size of the server log files in bytes above which a
10:09:27# new log file should be created.
10:09:27omero.logging.logsize=5000000
10:09:2710:09:27## (For documentation only)
10:09:27# If omero.logging.timedlog is false or unset, specifies the
10:09:27# number of old server log files that should be kept. Old log
10:09:27# files will be saved by appending the extensions '\''.1'\'', '\''.2'\'' etc.
10:09:27omero.logging.lognum=9
10:09:2710:09:27## (For documentation only)
10:09:27# Specifies the threshold for the Python servers log files. Logging messages
10:09:27# which are less severe than this value will be ignored. For a list of
10:09:27# available values, see https://docs.python.org/3/library/logging.html#levels.
10:09:27omero.logging.level=20
10:09:2710:09:27#############################################
10:09:27## Ice overrides
10:09:27##
10:09:27## Though not used directly by OMERO, a number
10:09:27## of properties prefixed with "Ice.*" will
10:09:27## alter the behavior of the OMERO runtime
10:09:27## by configuring the Ice communicators. For a
10:09:27## full listing see:
10:09:27##
10:09:27## http://doc.zeroc.com/display/Ice/Property+Reference10:09:27## For more information see
10:09:27## https://docs.openmicroscopy.org/latest/omero/sysadmins/troubleshooting.html#server-fails-to-start10:09:27#############################################
10:09:2710:09:27# Disable IPv6 by setting to 0. Only needed in
10:09:27# certain situations.
10:09:27Ice.IPv6=1
10:09:2710:09:27# Glacier2Template IceSSL defaults and overrides,
10:09:27# see https://doc.zeroc.com/ice/3.6/property-reference/icessl.
10:09:27# Any property beginning ``omero.glacier2.IceSSL.`` will be used to
10:09:27# update the corresponding IceSSL. property.
10:09:27omero.glacier2.IceSSL=
10:09:2710:09:27# Glacier2Template SSL maximum allowed protocol (mac bug)
10:09:27omero.glacier2.IceSSL.ProtocolVersionMax=tls1_1
10:09:27# Glacier2Template SSL allowed cipher suites
10:09:27omero.glacier2.IceSSL.Ciphers=ADH:!LOW:!MD5:!EXP:!3DES:@STRENGTH
10:09:27# Glacier2Template SSL verification requirements
10:09:27omero.glacier2.IceSSL.VerifyPeer=0
10:09:27# Glacier2Template SSL allowed protocols
10:09:27omero.glacier2.IceSSL.Protocols=tls1
10:09:2710:09:27# Override the default set of OMERO services.
10:09:27# For example, to run OMERO.server with Blitz and Tables only
10:09:27# (i.e. disable Processor, DropBox, Indexer, PixelData)
10:09:27# set this to ``master:Blitz-0,Tables-0``.
10:09:27# Also use this to distribute OMERO services across multiple nodes,
10:09:27# for example:
10:09:27# ``master:Blitz-0,Tables-0 worker1:Processor-0``.
10:09:27# See
10:09:27# https://docs.openmicroscopy.org/omero/latest/sysadmins/grid.html#deployment-examples10:09:27omero.server.nodedescriptors=
10:09:2710:09:27#############################################
10:09:27## Darwin (OS X) specific defaults for templated configuration files only.
10:09:27## ``_xxx.yyy.darwin`` properties will override xxx.yyy properties in this
10:09:27## file.
10:09:27## Do not set these properties in ``omero config``, instead set the original
10:09:27## ``xxx.yyy`` property
10:09:27#############################################
10:09:27_omero.glacier2.IceSSL.Ciphers.darwin=(AES)
10:09:2710:09:27## (For documentation only)
10:09:27# Name of the Python module to use when starting the Tables service
10:09:27omero.tables.module=runTables
10:09:2710:09:27#############################################
10:09:27## Server product name for release artifacts
10:09:27#############################################
10:09:27product.name=OMERO.server
10:09:2710:09:27#############################################
10:09:27### Properties below this marker are ignored by
10:09:27### omero.install.config_parser.PropertyParser
10:09:27### END
10:09:2710:09:27#############################################
10:09:27## Library versions
10:09:27#############################################
10:09:27##
10:09:27versions.findbugs=1.2.1
10:09:27versions.ice36=3.6.5
10:09:27versions.ice36_lib=36
10:09:27## internal
10:09:27versions.omeroshares36=3.6.3
10:09:27versions.omeromock36=3.6.3
10:09:27versions.icedb36=3.6.3
10:09:27versions.ipython=1.2.1
10:09:2710:09:27versions.janino=2.5.10
10:09:2710:09:27versions.reportng=1.1.1
10:09:2710:09:27versions.testng=7.5
10:09:27versions.velocity=1.4
10:09:2710:09:27versions.omero-pypi=https://pypi.io/packages/source/o/PACKAGE10:09:27versions.omero-scripts-url=${versions.omero-pypi}
10:09:2710:09:27###
10:09:27### Appended Values
10:09:27###
10:09:2710:09:27## Internal dependencies'
10:09:27+ echo versions.omero-pypi=https://merge-ci.openmicroscopy.org/jenkins//job/OMERO-python-superbuild-build/lastSuccessfulBuild/artifact/PACKAGE/dist/10:09:27+ echo versions.omero-github=https://github.com/snoopycrimecop/PACKAGE/archive10:09:27+ echo versions.scripts-prefix=
10:09:27+ echo versions.scripts=merge_ci
10:09:27+ cat /home/omero/workspace/OMERO-push/version.properties
10:09:27+ git commit -a -m 'Add version.properties to etc/omero.properties'
10:09:27[detached HEAD 4b3d48d518] Add version.properties to etc/omero.properties
10:09:27 1 file changed, 46 insertions(+), 7 deletions(-)
10:09:27+ git push -f git@github.com:snoopycrimecop/openmicroscopy.git HEAD:refs/heads/merge_ci
10:09:28To github.com:snoopycrimecop/openmicroscopy.git
10:09:28 + 790b3f86dd...4b3d48d518 HEAD -> merge_ci (forced update)
10:09:28Finished: SUCCESS
