13:21:45Started by upstream project "Trigger" build number 17613:21:45originally caused by:
13:21:45 Started by user devspace13:21:45Running as SYSTEM
13:21:45Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-push
13:21:45The recommended git tool is: NONE
13:21:45No credentials specified
13:21:45 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-push/src/.git # timeout=10
13:21:45Fetching changes from the remote Git repository
13:21:45 > git config remote.origin.url https://github.com/ome/openmicroscopy.git # timeout=10
13:21:45Fetching upstream changes from https://github.com/ome/openmicroscopy.git13:21:45 > git --version # timeout=10
13:21:45 > git --version # 'git version 2.47.3'
13:21:45 > git fetch --tags --force --progress -- https://github.com/ome/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
13:21:45 > git rev-parse origin/develop^{commit} # timeout=10
13:21:45Checking out Revision fe46b79639396fd7473d874736918c245c8a7024 (origin/develop)
13:21:45 > git config core.sparsecheckout # timeout=10
13:21:45 > git checkout -f fe46b79639396fd7473d874736918c245c8a7024 # timeout=30
13:21:45Commit message: "Merge pull request #6447 from sbesson/OMERO.server_5.6.17_release_notes"
13:21:45 > git rev-list --no-walk fe46b79639396fd7473d874736918c245c8a7024 # timeout=10
13:21:46Cleaning workspace
13:21:46 > git rev-parse --verify HEAD # timeout=10
13:21:46Resetting working tree
13:21:46 > git reset --hard # timeout=10
13:21:46 > git clean -fdx # timeout=10
13:21:46Copied 1 artifact from "OMERO-python-superbuild-build" build number 12513:21:46[OMERO-push] $ /bin/bash -xe /tmp/jenkins18221972010035594269.sh
13:21:46+ python3.11 -mvenv venv
13:21:47+ source /home/omero/workspace/OMERO-push/venv/bin/activate
13:21:47++ deactivate nondestructive
13:21:47++ '[' -n '' ']'
13:21:47++ '[' -n '' ']'
13:21:47++ hash -r
13:21:47++ '[' -n '' ']'
13:21:47++ unset VIRTUAL_ENV
13:21:47++ unset VIRTUAL_ENV_PROMPT
13:21:47++ '[' '!' nondestructive = nondestructive ']'
13:21:47++ VIRTUAL_ENV=/home/omero/workspace/OMERO-push/venv
13:21:47++ export VIRTUAL_ENV
13:21:47++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
13:21:47++ PATH=/home/omero/workspace/OMERO-push/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
13:21:47++ export PATH
13:21:47++ '[' -n '' ']'
13:21:47++ '[' -z '' ']'
13:21:47++ _OLD_VIRTUAL_PS1=
13:21:47++ PS1='(venv) '
13:21:47++ export PS1
13:21:47++ VIRTUAL_ENV_PROMPT='(venv) '
13:21:47++ export VIRTUAL_ENV_PROMPT
13:21:47++ hash -r
13:21:47+ pip install -U pip
13:21:48Requirement already satisfied: pip in ./venv/lib64/python3.11/site-packages (26.0.1)
13:21:48+ pip install -U scc
13:21:48Requirement already satisfied: scc in ./venv/lib64/python3.11/site-packages (0.20.0)
13:21:48Requirement already satisfied: PyGithub>=1.54 in ./venv/lib64/python3.11/site-packages (from scc) (2.9.1)
13:21:48Requirement already satisfied: PyYAML>=5.1 in ./venv/lib64/python3.11/site-packages (from scc) (6.0.3)
13:21:48Requirement already satisfied: future in ./venv/lib64/python3.11/site-packages (from scc) (1.0.0)
13:21:48Requirement already satisfied: ruamel.yaml in ./venv/lib64/python3.11/site-packages (from scc) (0.19.1)
13:21:48Requirement already satisfied: ruamel.yaml.jinja2 in ./venv/lib64/python3.11/site-packages (from scc) (0.2.7)
13:21:48Requirement already satisfied: six in ./venv/lib64/python3.11/site-packages (from scc) (1.17.0)
13:21:48Requirement already satisfied: urllib3<2 in ./venv/lib64/python3.11/site-packages (from scc) (1.26.20)
13:21:48Requirement already satisfied: yaclifw<0.3,>=0.2.0 in ./venv/lib64/python3.11/site-packages (from scc) (0.2.0)
13:21:48Requirement already satisfied: pynacl>=1.4.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (1.6.2)
13:21:48Requirement already satisfied: requests>=2.14.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (2.33.1)
13:21:48Requirement already satisfied: pyjwt>=2.4.0 in ./venv/lib64/python3.11/site-packages (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (2.12.1)
13:21:48Requirement already satisfied: typing-extensions>=4.5.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (4.15.0)
13:21:48Requirement already satisfied: cryptography>=3.4.0 in ./venv/lib64/python3.11/site-packages (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (46.0.7)
13:21:48Requirement already satisfied: cffi>=2.0.0 in ./venv/lib64/python3.11/site-packages (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (2.0.0)
13:21:48Requirement already satisfied: pycparser in ./venv/lib64/python3.11/site-packages (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (3.0)
13:21:48Requirement already satisfied: charset_normalizer<4,>=2 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (3.4.7)
13:21:48Requirement already satisfied: idna<4,>=2.5 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (3.11)
13:21:48Requirement already satisfied: certifi>=2023.5.7 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (2026.2.25)
13:21:48+ test -e src
13:21:48+ cd src
13:21:48++ git config github.user
13:21:48+ user=snoopycrimecop
13:21:48+ scc merge develop --no-ask --reset --shallow -S success-only
13:21:522026-04-23 13:21:52,829 [ scc.merge] INFO Merging Pull Request(s) based on develop
13:21:522026-04-23 13:21:52,829 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
13:21:522026-04-23 13:21:52,829 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
13:21:522026-04-23 13:21:52,829 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
13:21:522026-04-23 13:21:52,829 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
13:21:522026-04-23 13:21:52,829 [ scc.merge] INFO Excluding Pull Request(s) without successful status
13:22:012026-04-23 13:22:01,521 [ scc.merge] INFO Repository: ome/openmicroscopy
13:22:012026-04-23 13:22:01,521 [ scc.merge] INFO Excluded PRs:
13:22:012026-04-23 13:22:01,521 [ scc.merge] INFO - PR 6423 jburel 'Use \d' (status: failure)
13:22:012026-04-23 13:22:01,521 [ scc.merge] INFO - PR 6212 jburel 'add test to import images' (exclude comment)
13:22:012026-04-23 13:22:01,521 [ scc.merge] INFO Already up to date.
13:22:012026-04-23 13:22:01,521 [ scc.merge] INFO
13:22:012026-04-23 13:22:01,521 [ scc.merge] INFO Merged PRs:
13:22:012026-04-23 13:22:01,521 [ scc.merge] INFO - PR 6450 dominikl 'Add omero-zarr-pixel-buffer'
13:22:012026-04-23 13:22:01,521 [ scc.merge] INFO
13:22:01+ cp etc/omero.properties etc/omero.properties.bak
13:22:01+ rm etc/omero.properties
13:22:01+ touch etc/omero.properties
13:22:01++ sed -n '/Internal dependencies/=' etc/omero.properties.bak
13:22:01+ ne=249
13:22:01++ sed -n 1,249p etc/omero.properties.bak
13:22:01+ line='##
13:22:01## omero.properties
13:22:01## ----------------
13:22:01##
13:22:01## DO NOT EDIT!
13:22:01##
13:22:01##
13:22:01## Any of these properties can be altered by using `omero config`. MODIFYING
13:22:01## THIS FILE DOES NOT ALTER SERVER BEHAVIOR. It solely defines the defaults
13:22:01## at compile time!
13:22:01##
13:22:01## For an overview of these properties, see
13:22:01## https://docs.openmicroscopy.org/latest/omero/sysadmins/config.html13:22:01##
13:22:01## Properties marked with "DEVELOPMENT" should not be used in production.
13:22:0113:22:01# Comma separated list of Ice transports available to clients. The default
13:22:01# value ("ssl,tcp") instructs Ice to open the ports specified by the
13:22:01# omero.ports.ssl and omero.ports.tcp properties. Restricting to "ssl"
13:22:01# will prevent all non-encrypted connections to the OMERO server.
13:22:01#
13:22:01# Additionally, there are two experimental values for using websockets:
13:22:01# "ws" and "wss" for unencrypted and encrypted, respectively. The ports
13:22:01# that are opened are controlled by the omero.ports.ws and omero.ports.wss
13:22:01# properties. To enable all possible protocols use: "ssl,tcp,wss,ws".
13:22:01#
13:22:01# Note: When using websockets behind a web server like nginx, additional
13:22:01# configuration may be needed.
13:22:01omero.client.icetransports=ssl,tcp
13:22:0113:22:01# The prefix to apply to all port numbers (SSL, TCP, registry) used by the
13:22:01# server
13:22:01omero.ports.prefix=
13:22:0113:22:01# The Glacier2 SSL port number to use
13:22:01omero.ports.ssl=4064
13:22:0113:22:01# The Glacier2 TCP port number to use (unencrypted)
13:22:01omero.ports.tcp=4063
13:22:0113:22:01# The Glacier2 WSS port number to use
13:22:01omero.ports.wss=4066
13:22:0113:22:01# The Glacier2 WS port number to use (unencrypted)
13:22:01omero.ports.ws=4065
13:22:0113:22:01# The IceGrid registry port number to use
13:22:01omero.ports.registry=4061
13:22:0113:22:01#############################################
13:22:01## JVM configuration
13:22:01##
13:22:01## Note: changes to the omero.jvmcfg properties
13:22:01## will *not* be reflected in OMERO.server
13:22:01## since they are defined in OMERO.py.
13:22:01#############################################
13:22:01## (For documentation only)
13:22:01# Memory strategy which will be used by default.
13:22:01# Options include: percent, manual
13:22:01omero.jvmcfg.strategy=percent
13:22:0113:22:01## (For documentation only)
13:22:01# Explicit value for the `-Xmx` argument, e.g.
13:22:01# "1g"
13:22:01omero.jvmcfg.heap_size=
13:22:0113:22:01## (For documentation only)
13:22:01# Explicit value for the MaxPermSize argument
13:22:01# to the JVM, e.g. "500M". Ignored for Java8+
13:22:01omero.jvmcfg.perm_gen=
13:22:0113:22:01## (For documentation only)
13:22:01# Toggles on or off heap dumps on OOMs. Default is "off".
13:22:01# The special value "tmp" will create the heap dumps in
13:22:01# your temp directory.
13:22:01omero.jvmcfg.heap_dump=
13:22:0113:22:01## (For documentation only)
13:22:01# Used only by the percent strategy. An integer between 0
13:22:01# and 100 which is the percent of active memory that will
13:22:01# be used by the service.
13:22:01omero.jvmcfg.percent=
13:22:0113:22:01## (For documentation only)
13:22:01# Contains other parameters which should be passed to the
13:22:01# JVM. The value of "append" is treated as if it were on
13:22:01# the command line so will be separated on whitespace.
13:22:01# For example, '\''-XX:-PrintGC -XX:+UseCompressedOops'\'' would
13:22:01# results in two new arguments.
13:22:01# Note that when using `config set` from the command line
13:22:01# one may need to give a prior `--` option to prevent a value
13:22:01# starting with `-` from already being parsed as an option,
13:22:01# and values may need quoting to prevent whitespace or other
13:22:01# significant characters from being interpreted prematurely.
13:22:0113:22:01omero.jvmcfg.append=
13:22:0113:22:01## (For documentation only)
13:22:01# Manual override of the total system memory that
13:22:01# OMERO will *think* is present on the local OS (MB).
13:22:01# If unset, an attempt will be made to detect the actual
13:22:01# amount: first by using the Python library `psutil` and
13:22:01# if that is not installed, by running a Java tool. If
13:22:01# neither works, 4.0GB is assumed.
13:22:01omero.jvmcfg.system_memory=
13:22:0113:22:01## (For documentation only)
13:22:01# Suggestion for strategies as to the minimum memory
13:22:01# that they will use for calculating JVM settings (MB).
13:22:01omero.jvmcfg.min_system_memory=3414
13:22:0113:22:01## (For documentation only)
13:22:01# Suggestion for strategies as to the maximum memory
13:22:01# that they will use for calculating JVM settings (MB).
13:22:01omero.jvmcfg.max_system_memory=48000
13:22:0113:22:0113:22:01#############################################
13:22:01## Logging properties
13:22:01##
13:22:01## Note: changes to the default omero.logging values in
13:22:01## this file will *not* be reflected in OMERO.server
13:22:01## since they are defined in OMERO.py
13:22:01#############################################
13:22:0113:22:01## (For documentation only)
13:22:01# Relative server directory where the log files should be stored.
13:22:01omero.logging.directory=var/log/
13:22:0113:22:01## (For documentation only)
13:22:01# Whether the server log files should be rotated at a certain time
13:22:01# interval. If true, log files will be rolled over at midnight.
13:22:01# Otherwise, log files will be rolled over at a predetermined size,
13:22:01# see omero.logging.logsize for more information.
13:22:01omero.logging.timedlog=false
13:22:0113:22:01## (For documentation only)
13:22:01# If omero.logging.timedlog is false or unset, specifies the
13:22:01# maximum size of the server log files in bytes above which a
13:22:01# new log file should be created.
13:22:01omero.logging.logsize=5000000
13:22:0113:22:01## (For documentation only)
13:22:01# If omero.logging.timedlog is false or unset, specifies the
13:22:01# number of old server log files that should be kept. Old log
13:22:01# files will be saved by appending the extensions '\''.1'\'', '\''.2'\'' etc.
13:22:01omero.logging.lognum=9
13:22:0113:22:01## (For documentation only)
13:22:01# Specifies the threshold for the Python servers log files. Logging messages
13:22:01# which are less severe than this value will be ignored. For a list of
13:22:01# available values, see https://docs.python.org/3/library/logging.html#levels.
13:22:01omero.logging.level=20
13:22:0113:22:01#############################################
13:22:01## Ice overrides
13:22:01##
13:22:01## Though not used directly by OMERO, a number
13:22:01## of properties prefixed with "Ice.*" will
13:22:01## alter the behavior of the OMERO runtime
13:22:01## by configuring the Ice communicators. For a
13:22:01## full listing see:
13:22:01##
13:22:01## http://doc.zeroc.com/display/Ice/Property+Reference13:22:01## For more information see
13:22:01## https://docs.openmicroscopy.org/latest/omero/sysadmins/troubleshooting.html#server-fails-to-start13:22:01#############################################
13:22:0113:22:01# Disable IPv6 by setting to 0. Only needed in
13:22:01# certain situations.
13:22:01Ice.IPv6=1
13:22:0113:22:01# Glacier2Template IceSSL defaults and overrides,
13:22:01# see https://doc.zeroc.com/ice/3.6/property-reference/icessl.
13:22:01# Any property beginning ``omero.glacier2.IceSSL.`` will be used to
13:22:01# update the corresponding IceSSL. property.
13:22:01omero.glacier2.IceSSL=
13:22:0113:22:01# Glacier2Template SSL maximum allowed protocol (mac bug)
13:22:01omero.glacier2.IceSSL.ProtocolVersionMax=tls1_1
13:22:01# Glacier2Template SSL allowed cipher suites
13:22:01omero.glacier2.IceSSL.Ciphers=ADH:!LOW:!MD5:!EXP:!3DES:@STRENGTH
13:22:01# Glacier2Template SSL verification requirements
13:22:01omero.glacier2.IceSSL.VerifyPeer=0
13:22:01# Glacier2Template SSL allowed protocols
13:22:01omero.glacier2.IceSSL.Protocols=tls1
13:22:0113:22:01# Override the default set of OMERO services.
13:22:01# For example, to run OMERO.server with Blitz and Tables only
13:22:01# (i.e. disable Processor, DropBox, Indexer, PixelData)
13:22:01# set this to ``master:Blitz-0,Tables-0``.
13:22:01# Also use this to distribute OMERO services across multiple nodes,
13:22:01# for example:
13:22:01# ``master:Blitz-0,Tables-0 worker1:Processor-0``.
13:22:01# See
13:22:01# https://docs.openmicroscopy.org/omero/latest/sysadmins/grid.html#deployment-examples13:22:01omero.server.nodedescriptors=
13:22:0113:22:01#############################################
13:22:01## Darwin (OS X) specific defaults for templated configuration files only.
13:22:01## ``_xxx.yyy.darwin`` properties will override xxx.yyy properties in this
13:22:01## file.
13:22:01## Do not set these properties in ``omero config``, instead set the original
13:22:01## ``xxx.yyy`` property
13:22:01#############################################
13:22:01_omero.glacier2.IceSSL.Ciphers.darwin=(AES)
13:22:0113:22:01## (For documentation only)
13:22:01# Name of the Python module to use when starting the Tables service
13:22:01omero.tables.module=runTables
13:22:0113:22:01#############################################
13:22:01## Server product name for release artifacts
13:22:01#############################################
13:22:01product.name=OMERO.server
13:22:0113:22:01#############################################
13:22:01### Properties below this marker are ignored by
13:22:01### omero.install.config_parser.PropertyParser
13:22:01### END
13:22:0113:22:01#############################################
13:22:01## Library versions
13:22:01#############################################
13:22:01##
13:22:01versions.findbugs=1.2.1
13:22:01versions.ice36=3.6.5
13:22:01versions.ice36_lib=36
13:22:01## internal
13:22:01versions.omeroshares36=3.6.3
13:22:01versions.omeromock36=3.6.3
13:22:01versions.icedb36=3.6.3
13:22:01versions.ipython=1.2.1
13:22:0113:22:01versions.janino=2.5.10
13:22:0113:22:01versions.reportng=1.1.1
13:22:0113:22:01versions.testng=7.5
13:22:01versions.velocity=1.4
13:22:0113:22:01versions.omero-pypi=https://pypi.io/packages/source/o/PACKAGE13:22:01versions.omero-scripts-url=${versions.omero-pypi}
13:22:0113:22:01###
13:22:01### Appended Values
13:22:01###
13:22:0113:22:01## Internal dependencies'
13:22:01+ echo '##
13:22:01## omero.properties
13:22:01## ----------------
13:22:01##
13:22:01## DO NOT EDIT!
13:22:01##
13:22:01##
13:22:01## Any of these properties can be altered by using `omero config`. MODIFYING
13:22:01## THIS FILE DOES NOT ALTER SERVER BEHAVIOR. It solely defines the defaults
13:22:01## at compile time!
13:22:01##
13:22:01## For an overview of these properties, see
13:22:01## https://docs.openmicroscopy.org/latest/omero/sysadmins/config.html13:22:01##
13:22:01## Properties marked with "DEVELOPMENT" should not be used in production.
13:22:0113:22:01# Comma separated list of Ice transports available to clients. The default
13:22:01# value ("ssl,tcp") instructs Ice to open the ports specified by the
13:22:01# omero.ports.ssl and omero.ports.tcp properties. Restricting to "ssl"
13:22:01# will prevent all non-encrypted connections to the OMERO server.
13:22:01#
13:22:01# Additionally, there are two experimental values for using websockets:
13:22:01# "ws" and "wss" for unencrypted and encrypted, respectively. The ports
13:22:01# that are opened are controlled by the omero.ports.ws and omero.ports.wss
13:22:01# properties. To enable all possible protocols use: "ssl,tcp,wss,ws".
13:22:01#
13:22:01# Note: When using websockets behind a web server like nginx, additional
13:22:01# configuration may be needed.
13:22:01omero.client.icetransports=ssl,tcp
13:22:0113:22:01# The prefix to apply to all port numbers (SSL, TCP, registry) used by the
13:22:01# server
13:22:01omero.ports.prefix=
13:22:0113:22:01# The Glacier2 SSL port number to use
13:22:01omero.ports.ssl=4064
13:22:0113:22:01# The Glacier2 TCP port number to use (unencrypted)
13:22:01omero.ports.tcp=4063
13:22:0113:22:01# The Glacier2 WSS port number to use
13:22:01omero.ports.wss=4066
13:22:0113:22:01# The Glacier2 WS port number to use (unencrypted)
13:22:01omero.ports.ws=4065
13:22:0113:22:01# The IceGrid registry port number to use
13:22:01omero.ports.registry=4061
13:22:0113:22:01#############################################
13:22:01## JVM configuration
13:22:01##
13:22:01## Note: changes to the omero.jvmcfg properties
13:22:01## will *not* be reflected in OMERO.server
13:22:01## since they are defined in OMERO.py.
13:22:01#############################################
13:22:01## (For documentation only)
13:22:01# Memory strategy which will be used by default.
13:22:01# Options include: percent, manual
13:22:01omero.jvmcfg.strategy=percent
13:22:0113:22:01## (For documentation only)
13:22:01# Explicit value for the `-Xmx` argument, e.g.
13:22:01# "1g"
13:22:01omero.jvmcfg.heap_size=
13:22:0113:22:01## (For documentation only)
13:22:01# Explicit value for the MaxPermSize argument
13:22:01# to the JVM, e.g. "500M". Ignored for Java8+
13:22:01omero.jvmcfg.perm_gen=
13:22:0113:22:01## (For documentation only)
13:22:01# Toggles on or off heap dumps on OOMs. Default is "off".
13:22:01# The special value "tmp" will create the heap dumps in
13:22:01# your temp directory.
13:22:01omero.jvmcfg.heap_dump=
13:22:0113:22:01## (For documentation only)
13:22:01# Used only by the percent strategy. An integer between 0
13:22:01# and 100 which is the percent of active memory that will
13:22:01# be used by the service.
13:22:01omero.jvmcfg.percent=
13:22:0113:22:01## (For documentation only)
13:22:01# Contains other parameters which should be passed to the
13:22:01# JVM. The value of "append" is treated as if it were on
13:22:01# the command line so will be separated on whitespace.
13:22:01# For example, '\''-XX:-PrintGC -XX:+UseCompressedOops'\'' would
13:22:01# results in two new arguments.
13:22:01# Note that when using `config set` from the command line
13:22:01# one may need to give a prior `--` option to prevent a value
13:22:01# starting with `-` from already being parsed as an option,
13:22:01# and values may need quoting to prevent whitespace or other
13:22:01# significant characters from being interpreted prematurely.
13:22:0113:22:01omero.jvmcfg.append=
13:22:0113:22:01## (For documentation only)
13:22:01# Manual override of the total system memory that
13:22:01# OMERO will *think* is present on the local OS (MB).
13:22:01# If unset, an attempt will be made to detect the actual
13:22:01# amount: first by using the Python library `psutil` and
13:22:01# if that is not installed, by running a Java tool. If
13:22:01# neither works, 4.0GB is assumed.
13:22:01omero.jvmcfg.system_memory=
13:22:0113:22:01## (For documentation only)
13:22:01# Suggestion for strategies as to the minimum memory
13:22:01# that they will use for calculating JVM settings (MB).
13:22:01omero.jvmcfg.min_system_memory=3414
13:22:0113:22:01## (For documentation only)
13:22:01# Suggestion for strategies as to the maximum memory
13:22:01# that they will use for calculating JVM settings (MB).
13:22:01omero.jvmcfg.max_system_memory=48000
13:22:0113:22:0113:22:01#############################################
13:22:01## Logging properties
13:22:01##
13:22:01## Note: changes to the default omero.logging values in
13:22:01## this file will *not* be reflected in OMERO.server
13:22:01## since they are defined in OMERO.py
13:22:01#############################################
13:22:0113:22:01## (For documentation only)
13:22:01# Relative server directory where the log files should be stored.
13:22:01omero.logging.directory=var/log/
13:22:0113:22:01## (For documentation only)
13:22:01# Whether the server log files should be rotated at a certain time
13:22:01# interval. If true, log files will be rolled over at midnight.
13:22:01# Otherwise, log files will be rolled over at a predetermined size,
13:22:01# see omero.logging.logsize for more information.
13:22:01omero.logging.timedlog=false
13:22:0113:22:01## (For documentation only)
13:22:01# If omero.logging.timedlog is false or unset, specifies the
13:22:01# maximum size of the server log files in bytes above which a
13:22:01# new log file should be created.
13:22:01omero.logging.logsize=5000000
13:22:0113:22:01## (For documentation only)
13:22:01# If omero.logging.timedlog is false or unset, specifies the
13:22:01# number of old server log files that should be kept. Old log
13:22:01# files will be saved by appending the extensions '\''.1'\'', '\''.2'\'' etc.
13:22:01omero.logging.lognum=9
13:22:0113:22:01## (For documentation only)
13:22:01# Specifies the threshold for the Python servers log files. Logging messages
13:22:01# which are less severe than this value will be ignored. For a list of
13:22:01# available values, see https://docs.python.org/3/library/logging.html#levels.
13:22:01omero.logging.level=20
13:22:0113:22:01#############################################
13:22:01## Ice overrides
13:22:01##
13:22:01## Though not used directly by OMERO, a number
13:22:01## of properties prefixed with "Ice.*" will
13:22:01## alter the behavior of the OMERO runtime
13:22:01## by configuring the Ice communicators. For a
13:22:01## full listing see:
13:22:01##
13:22:01## http://doc.zeroc.com/display/Ice/Property+Reference13:22:01## For more information see
13:22:01## https://docs.openmicroscopy.org/latest/omero/sysadmins/troubleshooting.html#server-fails-to-start13:22:01#############################################
13:22:0113:22:01# Disable IPv6 by setting to 0. Only needed in
13:22:01# certain situations.
13:22:01Ice.IPv6=1
13:22:0113:22:01# Glacier2Template IceSSL defaults and overrides,
13:22:01# see https://doc.zeroc.com/ice/3.6/property-reference/icessl.
13:22:01# Any property beginning ``omero.glacier2.IceSSL.`` will be used to
13:22:01# update the corresponding IceSSL. property.
13:22:01omero.glacier2.IceSSL=
13:22:0113:22:01# Glacier2Template SSL maximum allowed protocol (mac bug)
13:22:01omero.glacier2.IceSSL.ProtocolVersionMax=tls1_1
13:22:01# Glacier2Template SSL allowed cipher suites
13:22:01omero.glacier2.IceSSL.Ciphers=ADH:!LOW:!MD5:!EXP:!3DES:@STRENGTH
13:22:01# Glacier2Template SSL verification requirements
13:22:01omero.glacier2.IceSSL.VerifyPeer=0
13:22:01# Glacier2Template SSL allowed protocols
13:22:01omero.glacier2.IceSSL.Protocols=tls1
13:22:0113:22:01# Override the default set of OMERO services.
13:22:01# For example, to run OMERO.server with Blitz and Tables only
13:22:01# (i.e. disable Processor, DropBox, Indexer, PixelData)
13:22:01# set this to ``master:Blitz-0,Tables-0``.
13:22:01# Also use this to distribute OMERO services across multiple nodes,
13:22:01# for example:
13:22:01# ``master:Blitz-0,Tables-0 worker1:Processor-0``.
13:22:01# See
13:22:01# https://docs.openmicroscopy.org/omero/latest/sysadmins/grid.html#deployment-examples13:22:01omero.server.nodedescriptors=
13:22:0113:22:01#############################################
13:22:01## Darwin (OS X) specific defaults for templated configuration files only.
13:22:01## ``_xxx.yyy.darwin`` properties will override xxx.yyy properties in this
13:22:01## file.
13:22:01## Do not set these properties in ``omero config``, instead set the original
13:22:01## ``xxx.yyy`` property
13:22:01#############################################
13:22:01_omero.glacier2.IceSSL.Ciphers.darwin=(AES)
13:22:0113:22:01## (For documentation only)
13:22:01# Name of the Python module to use when starting the Tables service
13:22:01omero.tables.module=runTables
13:22:0113:22:01#############################################
13:22:01## Server product name for release artifacts
13:22:01#############################################
13:22:01product.name=OMERO.server
13:22:0113:22:01#############################################
13:22:01### Properties below this marker are ignored by
13:22:01### omero.install.config_parser.PropertyParser
13:22:01### END
13:22:0113:22:01#############################################
13:22:01## Library versions
13:22:01#############################################
13:22:01##
13:22:01versions.findbugs=1.2.1
13:22:01versions.ice36=3.6.5
13:22:01versions.ice36_lib=36
13:22:01## internal
13:22:01versions.omeroshares36=3.6.3
13:22:01versions.omeromock36=3.6.3
13:22:01versions.icedb36=3.6.3
13:22:01versions.ipython=1.2.1
13:22:0113:22:01versions.janino=2.5.10
13:22:0113:22:01versions.reportng=1.1.1
13:22:0113:22:01versions.testng=7.5
13:22:01versions.velocity=1.4
13:22:0113:22:01versions.omero-pypi=https://pypi.io/packages/source/o/PACKAGE13:22:01versions.omero-scripts-url=${versions.omero-pypi}
13:22:0113:22:01###
13:22:01### Appended Values
13:22:01###
13:22:0113:22:01## Internal dependencies'
13:22:01+ echo versions.omero-pypi=https://merge-ci.openmicroscopy.org/jenkins//job/OMERO-python-superbuild-build/lastSuccessfulBuild/artifact/PACKAGE/dist/13:22:01+ echo versions.omero-github=https://github.com/snoopycrimecop/PACKAGE/archive13:22:01+ echo versions.scripts-prefix=
13:22:01+ echo versions.scripts=merge_ci
13:22:01+ cat /home/omero/workspace/OMERO-push/version.properties
13:22:01+ git commit -a -m 'Add version.properties to etc/omero.properties'
13:22:01[detached HEAD 1d8d8cbb40] Add version.properties to etc/omero.properties
13:22:01 1 file changed, 46 insertions(+), 7 deletions(-)
13:22:01+ git push -f git@github.com:snoopycrimecop/openmicroscopy.git HEAD:refs/heads/merge_ci
13:22:03To github.com:snoopycrimecop/openmicroscopy.git
13:22:03 + a996c7bc4f...1d8d8cbb40 HEAD -> merge_ci (forced update)
13:22:03Finished: SUCCESS
