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10:19:09 Started by upstream project "Trigger" build number 189
10:19:09 originally caused by:
10:19:09  Started by user devspace
10:19:09 Running as SYSTEM
10:19:09 Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-push
10:19:09 The recommended git tool is: NONE
10:19:09 No credentials specified
10:19:09  > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-push/src/.git # timeout=10
10:19:09 Fetching changes from the remote Git repository
10:19:09  > git config remote.origin.url https://github.com/ome/openmicroscopy.git # timeout=10
10:19:09 Fetching upstream changes from https://github.com/ome/openmicroscopy.git
10:19:09  > git --version # timeout=10
10:19:09  > git --version # 'git version 2.47.3'
10:19:09  > git fetch --tags --force --progress -- https://github.com/ome/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
10:19:09  > git rev-parse origin/develop^{commit} # timeout=10
10:19:09 Checking out Revision fe46b79639396fd7473d874736918c245c8a7024 (origin/develop)
10:19:09  > git config core.sparsecheckout # timeout=10
10:19:09  > git checkout -f fe46b79639396fd7473d874736918c245c8a7024 # timeout=30
10:19:09 Commit message: "Merge pull request #6447 from sbesson/OMERO.server_5.6.17_release_notes"
10:19:09  > git rev-list --no-walk fe46b79639396fd7473d874736918c245c8a7024 # timeout=10
10:19:09 Cleaning workspace
10:19:09  > git rev-parse --verify HEAD # timeout=10
10:19:09 Resetting working tree
10:19:09  > git reset --hard # timeout=10
10:19:09  > git clean -fdx # timeout=10
10:19:09 Copied 1 artifact from "OMERO-python-superbuild-build" build number 133
10:19:09 [OMERO-push] $ /bin/bash -xe /tmp/jenkins13743815991591790693.sh
10:19:09 + python3.11 -mvenv venv
10:19:11 + source /home/omero/workspace/OMERO-push/venv/bin/activate
10:19:11 ++ deactivate nondestructive
10:19:11 ++ '[' -n '' ']'
10:19:11 ++ '[' -n '' ']'
10:19:11 ++ hash -r
10:19:11 ++ '[' -n '' ']'
10:19:11 ++ unset VIRTUAL_ENV
10:19:11 ++ unset VIRTUAL_ENV_PROMPT
10:19:11 ++ '[' '!' nondestructive = nondestructive ']'
10:19:11 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-push/venv
10:19:11 ++ export VIRTUAL_ENV
10:19:11 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
10:19:11 ++ PATH=/home/omero/workspace/OMERO-push/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
10:19:11 ++ export PATH
10:19:11 ++ '[' -n '' ']'
10:19:11 ++ '[' -z '' ']'
10:19:11 ++ _OLD_VIRTUAL_PS1=
10:19:11 ++ PS1='(venv) '
10:19:11 ++ export PS1
10:19:11 ++ VIRTUAL_ENV_PROMPT='(venv) '
10:19:11 ++ export VIRTUAL_ENV_PROMPT
10:19:11 ++ hash -r
10:19:11 + pip install -U pip
10:19:12 Requirement already satisfied: pip in ./venv/lib64/python3.11/site-packages (26.1)
10:19:12 + pip install -U scc
10:19:12 Requirement already satisfied: scc in ./venv/lib64/python3.11/site-packages (0.20.0)
10:19:12 Requirement already satisfied: PyGithub>=1.54 in ./venv/lib64/python3.11/site-packages (from scc) (2.9.1)
10:19:12 Requirement already satisfied: PyYAML>=5.1 in ./venv/lib64/python3.11/site-packages (from scc) (6.0.3)
10:19:12 Requirement already satisfied: future in ./venv/lib64/python3.11/site-packages (from scc) (1.0.0)
10:19:12 Requirement already satisfied: ruamel.yaml in ./venv/lib64/python3.11/site-packages (from scc) (0.19.1)
10:19:12 Requirement already satisfied: ruamel.yaml.jinja2 in ./venv/lib64/python3.11/site-packages (from scc) (0.2.7)
10:19:12 Requirement already satisfied: six in ./venv/lib64/python3.11/site-packages (from scc) (1.17.0)
10:19:12 Requirement already satisfied: urllib3<2 in ./venv/lib64/python3.11/site-packages (from scc) (1.26.20)
10:19:12 Requirement already satisfied: yaclifw<0.3,>=0.2.0 in ./venv/lib64/python3.11/site-packages (from scc) (0.2.0)
10:19:12 Requirement already satisfied: pynacl>=1.4.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (1.6.2)
10:19:12 Requirement already satisfied: requests>=2.14.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (2.33.1)
10:19:12 Requirement already satisfied: pyjwt>=2.4.0 in ./venv/lib64/python3.11/site-packages (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (2.12.1)
10:19:12 Requirement already satisfied: typing-extensions>=4.5.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (4.15.0)
10:19:12 Requirement already satisfied: cryptography>=3.4.0 in ./venv/lib64/python3.11/site-packages (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (46.0.7)
10:19:12 Requirement already satisfied: cffi>=2.0.0 in ./venv/lib64/python3.11/site-packages (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (2.0.0)
10:19:12 Requirement already satisfied: pycparser in ./venv/lib64/python3.11/site-packages (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (3.0)
10:19:12 Requirement already satisfied: charset_normalizer<4,>=2 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (3.4.7)
10:19:12 Requirement already satisfied: idna<4,>=2.5 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (3.11)
10:19:12 Requirement already satisfied: certifi>=2023.5.7 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (2026.2.25)
10:19:12 + test -e src
10:19:12 + cd src
10:19:12 ++ git config github.user
10:19:12 + user=snoopycrimecop
10:19:12 + scc merge develop --no-ask --reset --shallow -S success-only
10:19:16 2026-05-01 10:19:16,626 [   scc.merge] INFO  Merging Pull Request(s) based on develop
10:19:16 2026-05-01 10:19:16,626 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
10:19:16 2026-05-01 10:19:16,626 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
10:19:16 2026-05-01 10:19:16,626 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
10:19:16 2026-05-01 10:19:16,626 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
10:19:16 2026-05-01 10:19:16,626 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
10:19:20 2026-05-01 10:19:20,736 [   scc.merge] INFO  Repository: ome/openmicroscopy
10:19:20 2026-05-01 10:19:20,736 [   scc.merge] INFO  Excluded PRs:
10:19:20 2026-05-01 10:19:20,736 [   scc.merge] INFO    - PR 6450 dominikl 'Add omero-zarr-pixel-buffer' (exclude comment)
10:19:20 2026-05-01 10:19:20,736 [   scc.merge] INFO    - PR 6423 jburel 'Use \d' (status: failure)
10:19:20 2026-05-01 10:19:20,736 [   scc.merge] INFO    - PR 6212 jburel 'add test to import images' (exclude comment)
10:19:20 2026-05-01 10:19:20,736 [   scc.merge] INFO  Already up to date.
10:19:20 2026-05-01 10:19:20,736 [   scc.merge] INFO  
10:19:20 2026-05-01 10:19:20,736 [   scc.merge] INFO  
10:19:20 + cp etc/omero.properties etc/omero.properties.bak
10:19:20 + rm etc/omero.properties
10:19:20 + touch etc/omero.properties
10:19:20 ++ sed -n '/Internal dependencies/=' etc/omero.properties.bak
10:19:20 + ne=249
10:19:20 ++ sed -n 1,249p etc/omero.properties.bak
10:19:20 + line='##
10:19:20 ## omero.properties
10:19:20 ## ----------------
10:19:20 ##
10:19:20 ## DO NOT EDIT!
10:19:20 ##
10:19:20 ##
10:19:20 ## Any of these properties can be altered by using `omero config`. MODIFYING
10:19:20 ## THIS FILE DOES NOT ALTER SERVER BEHAVIOR. It solely defines the defaults
10:19:20 ## at compile time!
10:19:20 ##
10:19:20 ## For an overview of these properties, see
10:19:20 ## https://docs.openmicroscopy.org/latest/omero/sysadmins/config.html
10:19:20 ##
10:19:20 ## Properties marked with "DEVELOPMENT" should not be used in production.
10:19:20 
10:19:20 # Comma separated list of Ice transports available to clients. The default
10:19:20 # value ("ssl,tcp") instructs Ice to open the ports specified by the
10:19:20 # omero.ports.ssl and omero.ports.tcp properties. Restricting to "ssl"
10:19:20 # will prevent all non-encrypted connections to the OMERO server.
10:19:20 #
10:19:20 # Additionally, there are two experimental values for using websockets:
10:19:20 # "ws" and "wss" for unencrypted and encrypted, respectively. The ports
10:19:20 # that are opened are controlled by the omero.ports.ws and omero.ports.wss
10:19:20 # properties. To enable all possible protocols use: "ssl,tcp,wss,ws".
10:19:20 #
10:19:20 # Note: When using websockets behind a web server like nginx, additional
10:19:20 # configuration may be needed.
10:19:20 omero.client.icetransports=ssl,tcp
10:19:20 
10:19:20 # The prefix to apply to all port numbers (SSL, TCP, registry) used by the
10:19:20 # server
10:19:20 omero.ports.prefix=
10:19:20 
10:19:20 # The Glacier2 SSL port number to use
10:19:20 omero.ports.ssl=4064
10:19:20 
10:19:20 # The Glacier2 TCP port number to use (unencrypted)
10:19:20 omero.ports.tcp=4063
10:19:20 
10:19:20 # The Glacier2 WSS port number to use
10:19:20 omero.ports.wss=4066
10:19:20 
10:19:20 # The Glacier2 WS port number to use (unencrypted)
10:19:20 omero.ports.ws=4065
10:19:20 
10:19:20 # The IceGrid registry port number to use
10:19:20 omero.ports.registry=4061
10:19:20 
10:19:20 #############################################
10:19:20 ## JVM configuration
10:19:20 ##
10:19:20 ## Note: changes to the omero.jvmcfg properties
10:19:20 ## will *not* be reflected in OMERO.server
10:19:20 ## since they are defined in OMERO.py.
10:19:20 #############################################
10:19:20 ## (For documentation only)
10:19:20 # Memory strategy which will be used by default.
10:19:20 # Options include: percent, manual
10:19:20 omero.jvmcfg.strategy=percent
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # Explicit value for the `-Xmx` argument, e.g.
10:19:20 # "1g"
10:19:20 omero.jvmcfg.heap_size=
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # Explicit value for the MaxPermSize argument
10:19:20 # to the JVM, e.g. "500M". Ignored for Java8+
10:19:20 omero.jvmcfg.perm_gen=
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # Toggles on or off heap dumps on OOMs. Default is "off".
10:19:20 # The special value "tmp" will create the heap dumps in
10:19:20 # your temp directory.
10:19:20 omero.jvmcfg.heap_dump=
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # Used only by the percent strategy. An integer between 0
10:19:20 # and 100 which is the percent of active memory that will
10:19:20 # be used by the service.
10:19:20 omero.jvmcfg.percent=
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # Contains other parameters which should be passed to the
10:19:20 # JVM. The value of "append" is treated as if it were on
10:19:20 # the command line so will be separated on whitespace.
10:19:20 # For example, '\''-XX:-PrintGC -XX:+UseCompressedOops'\'' would
10:19:20 # results in two new arguments.
10:19:20 # Note that when using `config set` from the command line
10:19:20 # one may need to give a prior `--` option to prevent a value
10:19:20 # starting with `-` from already being parsed as an option,
10:19:20 # and values may need quoting to prevent whitespace or other
10:19:20 # significant characters from being interpreted prematurely.
10:19:20 
10:19:20 omero.jvmcfg.append=
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # Manual override of the total system memory that
10:19:20 # OMERO will *think* is present on the local OS (MB).
10:19:20 # If unset, an attempt will be made to detect the actual
10:19:20 # amount: first by using the Python library `psutil` and
10:19:20 # if that is not installed, by running a Java tool. If
10:19:20 # neither works, 4.0GB is assumed.
10:19:20 omero.jvmcfg.system_memory=
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # Suggestion for strategies as to the minimum memory
10:19:20 # that they will use for calculating JVM settings (MB).
10:19:20 omero.jvmcfg.min_system_memory=3414
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # Suggestion for strategies as to the maximum memory
10:19:20 # that they will use for calculating JVM settings (MB).
10:19:20 omero.jvmcfg.max_system_memory=48000
10:19:20 
10:19:20 
10:19:20 #############################################
10:19:20 ## Logging properties
10:19:20 ##
10:19:20 ## Note: changes to the default omero.logging values in
10:19:20 ## this file will *not* be reflected in OMERO.server
10:19:20 ## since they are defined in OMERO.py
10:19:20 #############################################
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # Relative server directory where the log files should be stored.
10:19:20 omero.logging.directory=var/log/
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # Whether the server log files should be rotated at a certain time
10:19:20 # interval. If true, log files will be rolled over at midnight.
10:19:20 # Otherwise, log files will be rolled over at a predetermined size,
10:19:20 # see omero.logging.logsize for more information.
10:19:20 omero.logging.timedlog=false
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # If omero.logging.timedlog is false or unset, specifies the
10:19:20 # maximum size of the server log files in bytes above which a
10:19:20 # new log file should be created.
10:19:20 omero.logging.logsize=5000000
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # If omero.logging.timedlog is false or unset, specifies the
10:19:20 # number of old server log files that should be kept. Old log
10:19:20 # files will be saved by appending the extensions '\''.1'\'', '\''.2'\'' etc.
10:19:20 omero.logging.lognum=9
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # Specifies the threshold for the Python servers log files. Logging messages
10:19:20 # which are less severe than this value will be ignored. For a list of
10:19:20 # available values, see https://docs.python.org/3/library/logging.html#levels.
10:19:20 omero.logging.level=20
10:19:20 
10:19:20 #############################################
10:19:20 ## Ice overrides
10:19:20 ##
10:19:20 ## Though not used directly by OMERO, a number
10:19:20 ## of properties prefixed with "Ice.*" will
10:19:20 ## alter the behavior of the OMERO runtime
10:19:20 ## by configuring the Ice communicators. For a
10:19:20 ## full listing see:
10:19:20 ##
10:19:20 ##   http://doc.zeroc.com/display/Ice/Property+Reference
10:19:20 ## For more information see
10:19:20 ## https://docs.openmicroscopy.org/latest/omero/sysadmins/troubleshooting.html#server-fails-to-start
10:19:20 #############################################
10:19:20 
10:19:20 # Disable IPv6 by setting to 0. Only needed in
10:19:20 # certain situations.
10:19:20 Ice.IPv6=1
10:19:20 
10:19:20 # Glacier2Template IceSSL defaults and overrides,
10:19:20 # see https://doc.zeroc.com/ice/3.6/property-reference/icessl.
10:19:20 # Any property beginning ``omero.glacier2.IceSSL.`` will be used to
10:19:20 # update the corresponding IceSSL. property.
10:19:20 omero.glacier2.IceSSL=
10:19:20 
10:19:20 # Glacier2Template SSL maximum allowed protocol (mac bug)
10:19:20 omero.glacier2.IceSSL.ProtocolVersionMax=tls1_1
10:19:20 # Glacier2Template SSL allowed cipher suites
10:19:20 omero.glacier2.IceSSL.Ciphers=ADH:!LOW:!MD5:!EXP:!3DES:@STRENGTH
10:19:20 # Glacier2Template SSL verification requirements
10:19:20 omero.glacier2.IceSSL.VerifyPeer=0
10:19:20 # Glacier2Template SSL allowed protocols
10:19:20 omero.glacier2.IceSSL.Protocols=tls1
10:19:20 
10:19:20 # Override the default set of OMERO services.
10:19:20 # For example, to run OMERO.server with Blitz and Tables only
10:19:20 # (i.e. disable Processor, DropBox, Indexer, PixelData)
10:19:20 # set this to ``master:Blitz-0,Tables-0``.
10:19:20 # Also use this to distribute OMERO services across multiple nodes,
10:19:20 # for example:
10:19:20 # ``master:Blitz-0,Tables-0 worker1:Processor-0``.
10:19:20 # See
10:19:20 # https://docs.openmicroscopy.org/omero/latest/sysadmins/grid.html#deployment-examples
10:19:20 omero.server.nodedescriptors=
10:19:20 
10:19:20 #############################################
10:19:20 ## Darwin (OS X) specific defaults for templated configuration files only.
10:19:20 ## ``_xxx.yyy.darwin`` properties will override xxx.yyy properties in this
10:19:20 ## file.
10:19:20 ## Do not set these properties in ``omero config``, instead set the original
10:19:20 ## ``xxx.yyy`` property
10:19:20 #############################################
10:19:20 _omero.glacier2.IceSSL.Ciphers.darwin=(AES)
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # Name of the Python module to use when starting the Tables service
10:19:20 omero.tables.module=runTables
10:19:20 
10:19:20 #############################################
10:19:20 ## Server product name for release artifacts
10:19:20 #############################################
10:19:20 product.name=OMERO.server
10:19:20 
10:19:20 #############################################
10:19:20 ### Properties below this marker are ignored by
10:19:20 ### omero.install.config_parser.PropertyParser
10:19:20 ### END
10:19:20 
10:19:20 #############################################
10:19:20 ## Library versions
10:19:20 #############################################
10:19:20 ##
10:19:20 versions.findbugs=1.2.1
10:19:20 versions.ice36=3.6.5
10:19:20 versions.ice36_lib=36
10:19:20 ## internal
10:19:20 versions.omeroshares36=3.6.3
10:19:20 versions.omeromock36=3.6.3
10:19:20 versions.icedb36=3.6.3
10:19:20 versions.ipython=1.2.1
10:19:20 
10:19:20 versions.janino=2.5.10
10:19:20 
10:19:20 versions.reportng=1.1.1
10:19:20 
10:19:20 versions.testng=7.5
10:19:20 versions.velocity=1.4
10:19:20 
10:19:20 versions.omero-pypi=https://pypi.io/packages/source/o/PACKAGE
10:19:20 versions.omero-scripts-url=${versions.omero-pypi}
10:19:20 
10:19:20 ###
10:19:20 ### Appended Values
10:19:20 ###
10:19:20 
10:19:20 ## Internal dependencies'
10:19:20 + echo '##
10:19:20 ## omero.properties
10:19:20 ## ----------------
10:19:20 ##
10:19:20 ## DO NOT EDIT!
10:19:20 ##
10:19:20 ##
10:19:20 ## Any of these properties can be altered by using `omero config`. MODIFYING
10:19:20 ## THIS FILE DOES NOT ALTER SERVER BEHAVIOR. It solely defines the defaults
10:19:20 ## at compile time!
10:19:20 ##
10:19:20 ## For an overview of these properties, see
10:19:20 ## https://docs.openmicroscopy.org/latest/omero/sysadmins/config.html
10:19:20 ##
10:19:20 ## Properties marked with "DEVELOPMENT" should not be used in production.
10:19:20 
10:19:20 # Comma separated list of Ice transports available to clients. The default
10:19:20 # value ("ssl,tcp") instructs Ice to open the ports specified by the
10:19:20 # omero.ports.ssl and omero.ports.tcp properties. Restricting to "ssl"
10:19:20 # will prevent all non-encrypted connections to the OMERO server.
10:19:20 #
10:19:20 # Additionally, there are two experimental values for using websockets:
10:19:20 # "ws" and "wss" for unencrypted and encrypted, respectively. The ports
10:19:20 # that are opened are controlled by the omero.ports.ws and omero.ports.wss
10:19:20 # properties. To enable all possible protocols use: "ssl,tcp,wss,ws".
10:19:20 #
10:19:20 # Note: When using websockets behind a web server like nginx, additional
10:19:20 # configuration may be needed.
10:19:20 omero.client.icetransports=ssl,tcp
10:19:20 
10:19:20 # The prefix to apply to all port numbers (SSL, TCP, registry) used by the
10:19:20 # server
10:19:20 omero.ports.prefix=
10:19:20 
10:19:20 # The Glacier2 SSL port number to use
10:19:20 omero.ports.ssl=4064
10:19:20 
10:19:20 # The Glacier2 TCP port number to use (unencrypted)
10:19:20 omero.ports.tcp=4063
10:19:20 
10:19:20 # The Glacier2 WSS port number to use
10:19:20 omero.ports.wss=4066
10:19:20 
10:19:20 # The Glacier2 WS port number to use (unencrypted)
10:19:20 omero.ports.ws=4065
10:19:20 
10:19:20 # The IceGrid registry port number to use
10:19:20 omero.ports.registry=4061
10:19:20 
10:19:20 #############################################
10:19:20 ## JVM configuration
10:19:20 ##
10:19:20 ## Note: changes to the omero.jvmcfg properties
10:19:20 ## will *not* be reflected in OMERO.server
10:19:20 ## since they are defined in OMERO.py.
10:19:20 #############################################
10:19:20 ## (For documentation only)
10:19:20 # Memory strategy which will be used by default.
10:19:20 # Options include: percent, manual
10:19:20 omero.jvmcfg.strategy=percent
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # Explicit value for the `-Xmx` argument, e.g.
10:19:20 # "1g"
10:19:20 omero.jvmcfg.heap_size=
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # Explicit value for the MaxPermSize argument
10:19:20 # to the JVM, e.g. "500M". Ignored for Java8+
10:19:20 omero.jvmcfg.perm_gen=
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # Toggles on or off heap dumps on OOMs. Default is "off".
10:19:20 # The special value "tmp" will create the heap dumps in
10:19:20 # your temp directory.
10:19:20 omero.jvmcfg.heap_dump=
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # Used only by the percent strategy. An integer between 0
10:19:20 # and 100 which is the percent of active memory that will
10:19:20 # be used by the service.
10:19:20 omero.jvmcfg.percent=
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # Contains other parameters which should be passed to the
10:19:20 # JVM. The value of "append" is treated as if it were on
10:19:20 # the command line so will be separated on whitespace.
10:19:20 # For example, '\''-XX:-PrintGC -XX:+UseCompressedOops'\'' would
10:19:20 # results in two new arguments.
10:19:20 # Note that when using `config set` from the command line
10:19:20 # one may need to give a prior `--` option to prevent a value
10:19:20 # starting with `-` from already being parsed as an option,
10:19:20 # and values may need quoting to prevent whitespace or other
10:19:20 # significant characters from being interpreted prematurely.
10:19:20 
10:19:20 omero.jvmcfg.append=
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # Manual override of the total system memory that
10:19:20 # OMERO will *think* is present on the local OS (MB).
10:19:20 # If unset, an attempt will be made to detect the actual
10:19:20 # amount: first by using the Python library `psutil` and
10:19:20 # if that is not installed, by running a Java tool. If
10:19:20 # neither works, 4.0GB is assumed.
10:19:20 omero.jvmcfg.system_memory=
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # Suggestion for strategies as to the minimum memory
10:19:20 # that they will use for calculating JVM settings (MB).
10:19:20 omero.jvmcfg.min_system_memory=3414
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # Suggestion for strategies as to the maximum memory
10:19:20 # that they will use for calculating JVM settings (MB).
10:19:20 omero.jvmcfg.max_system_memory=48000
10:19:20 
10:19:20 
10:19:20 #############################################
10:19:20 ## Logging properties
10:19:20 ##
10:19:20 ## Note: changes to the default omero.logging values in
10:19:20 ## this file will *not* be reflected in OMERO.server
10:19:20 ## since they are defined in OMERO.py
10:19:20 #############################################
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # Relative server directory where the log files should be stored.
10:19:20 omero.logging.directory=var/log/
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # Whether the server log files should be rotated at a certain time
10:19:20 # interval. If true, log files will be rolled over at midnight.
10:19:20 # Otherwise, log files will be rolled over at a predetermined size,
10:19:20 # see omero.logging.logsize for more information.
10:19:20 omero.logging.timedlog=false
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # If omero.logging.timedlog is false or unset, specifies the
10:19:20 # maximum size of the server log files in bytes above which a
10:19:20 # new log file should be created.
10:19:20 omero.logging.logsize=5000000
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # If omero.logging.timedlog is false or unset, specifies the
10:19:20 # number of old server log files that should be kept. Old log
10:19:20 # files will be saved by appending the extensions '\''.1'\'', '\''.2'\'' etc.
10:19:20 omero.logging.lognum=9
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # Specifies the threshold for the Python servers log files. Logging messages
10:19:20 # which are less severe than this value will be ignored. For a list of
10:19:20 # available values, see https://docs.python.org/3/library/logging.html#levels.
10:19:20 omero.logging.level=20
10:19:20 
10:19:20 #############################################
10:19:20 ## Ice overrides
10:19:20 ##
10:19:20 ## Though not used directly by OMERO, a number
10:19:20 ## of properties prefixed with "Ice.*" will
10:19:20 ## alter the behavior of the OMERO runtime
10:19:20 ## by configuring the Ice communicators. For a
10:19:20 ## full listing see:
10:19:20 ##
10:19:20 ##   http://doc.zeroc.com/display/Ice/Property+Reference
10:19:20 ## For more information see
10:19:20 ## https://docs.openmicroscopy.org/latest/omero/sysadmins/troubleshooting.html#server-fails-to-start
10:19:20 #############################################
10:19:20 
10:19:20 # Disable IPv6 by setting to 0. Only needed in
10:19:20 # certain situations.
10:19:20 Ice.IPv6=1
10:19:20 
10:19:20 # Glacier2Template IceSSL defaults and overrides,
10:19:20 # see https://doc.zeroc.com/ice/3.6/property-reference/icessl.
10:19:20 # Any property beginning ``omero.glacier2.IceSSL.`` will be used to
10:19:20 # update the corresponding IceSSL. property.
10:19:20 omero.glacier2.IceSSL=
10:19:20 
10:19:20 # Glacier2Template SSL maximum allowed protocol (mac bug)
10:19:20 omero.glacier2.IceSSL.ProtocolVersionMax=tls1_1
10:19:20 # Glacier2Template SSL allowed cipher suites
10:19:20 omero.glacier2.IceSSL.Ciphers=ADH:!LOW:!MD5:!EXP:!3DES:@STRENGTH
10:19:20 # Glacier2Template SSL verification requirements
10:19:20 omero.glacier2.IceSSL.VerifyPeer=0
10:19:20 # Glacier2Template SSL allowed protocols
10:19:20 omero.glacier2.IceSSL.Protocols=tls1
10:19:20 
10:19:20 # Override the default set of OMERO services.
10:19:20 # For example, to run OMERO.server with Blitz and Tables only
10:19:20 # (i.e. disable Processor, DropBox, Indexer, PixelData)
10:19:20 # set this to ``master:Blitz-0,Tables-0``.
10:19:20 # Also use this to distribute OMERO services across multiple nodes,
10:19:20 # for example:
10:19:20 # ``master:Blitz-0,Tables-0 worker1:Processor-0``.
10:19:20 # See
10:19:20 # https://docs.openmicroscopy.org/omero/latest/sysadmins/grid.html#deployment-examples
10:19:20 omero.server.nodedescriptors=
10:19:20 
10:19:20 #############################################
10:19:20 ## Darwin (OS X) specific defaults for templated configuration files only.
10:19:20 ## ``_xxx.yyy.darwin`` properties will override xxx.yyy properties in this
10:19:20 ## file.
10:19:20 ## Do not set these properties in ``omero config``, instead set the original
10:19:20 ## ``xxx.yyy`` property
10:19:20 #############################################
10:19:20 _omero.glacier2.IceSSL.Ciphers.darwin=(AES)
10:19:20 
10:19:20 ## (For documentation only)
10:19:20 # Name of the Python module to use when starting the Tables service
10:19:20 omero.tables.module=runTables
10:19:20 
10:19:20 #############################################
10:19:20 ## Server product name for release artifacts
10:19:20 #############################################
10:19:20 product.name=OMERO.server
10:19:20 
10:19:20 #############################################
10:19:20 ### Properties below this marker are ignored by
10:19:20 ### omero.install.config_parser.PropertyParser
10:19:20 ### END
10:19:20 
10:19:20 #############################################
10:19:20 ## Library versions
10:19:20 #############################################
10:19:20 ##
10:19:20 versions.findbugs=1.2.1
10:19:20 versions.ice36=3.6.5
10:19:20 versions.ice36_lib=36
10:19:20 ## internal
10:19:20 versions.omeroshares36=3.6.3
10:19:20 versions.omeromock36=3.6.3
10:19:20 versions.icedb36=3.6.3
10:19:20 versions.ipython=1.2.1
10:19:20 
10:19:20 versions.janino=2.5.10
10:19:20 
10:19:20 versions.reportng=1.1.1
10:19:20 
10:19:20 versions.testng=7.5
10:19:20 versions.velocity=1.4
10:19:20 
10:19:20 versions.omero-pypi=https://pypi.io/packages/source/o/PACKAGE
10:19:20 versions.omero-scripts-url=${versions.omero-pypi}
10:19:20 
10:19:20 ###
10:19:20 ### Appended Values
10:19:20 ###
10:19:20 
10:19:20 ## Internal dependencies'
10:19:20 + echo versions.omero-pypi=https://merge-ci.openmicroscopy.org/jenkins//job/OMERO-python-superbuild-build/lastSuccessfulBuild/artifact/PACKAGE/dist/
10:19:20 + echo versions.omero-github=https://github.com/snoopycrimecop/PACKAGE/archive
10:19:20 + echo versions.scripts-prefix=
10:19:20 + echo versions.scripts=merge_ci
10:19:20 + cat /home/omero/workspace/OMERO-push/version.properties
10:19:20 + git commit -a -m 'Add version.properties to etc/omero.properties'
10:19:20 [detached HEAD f2a9784d29] Add version.properties to etc/omero.properties
10:19:20  1 file changed, 46 insertions(+), 6 deletions(-)
10:19:20 + git push -f git@github.com:snoopycrimecop/openmicroscopy.git HEAD:refs/heads/merge_ci
10:19:22 To github.com:snoopycrimecop/openmicroscopy.git
10:19:22  + 4ae7ac9a4a...f2a9784d29 HEAD -> merge_ci (forced update)
10:19:22 Finished: SUCCESS