11:36:47Started by upstream project "Trigger" build number 43411:36:47originally caused by:
11:36:47 Started by user devspace11:36:47 Restarted from build #433, stage OMERO Python
11:36:47Running as SYSTEM
11:36:47Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-push
11:36:47The recommended git tool is: NONE
11:36:47No credentials specified
11:36:47 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-push/src/.git # timeout=10
11:36:47Fetching changes from the remote Git repository
11:36:47 > git config remote.origin.url https://github.com/ome/openmicroscopy.git # timeout=10
11:36:47Fetching upstream changes from https://github.com/ome/openmicroscopy.git11:36:47 > git --version # timeout=10
11:36:47 > git --version # 'git version 2.43.5'
11:36:47 > git fetch --tags --force --progress -- https://github.com/ome/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
11:36:47 > git rev-parse origin/develop^{commit} # timeout=10
11:36:47Checking out Revision 27b69ac69788e990c72b3ee0d5ff896a123abf84 (origin/develop)
11:36:47 > git config core.sparsecheckout # timeout=10
11:36:47 > git checkout -f 27b69ac69788e990c72b3ee0d5ff896a123abf84 # timeout=30
11:36:47Commit message: "Merge pull request #6427 from dominikl/5_6_15_changelog_2"
11:36:47 > git rev-list --no-walk 27b69ac69788e990c72b3ee0d5ff896a123abf84 # timeout=10
11:36:47Cleaning workspace
11:36:47 > git rev-parse --verify HEAD # timeout=10
11:36:47Resetting working tree
11:36:47 > git reset --hard # timeout=10
11:36:47 > git clean -fdx # timeout=10
11:36:47Copied 1 artifact from "OMERO-python-superbuild-build" build number 36811:36:47[OMERO-push] $ /bin/bash -xe /tmp/jenkins5431691282941609266.sh
11:36:47+ python3.11 -mvenv venv
11:36:49+ source /home/omero/workspace/OMERO-push/venv/bin/activate
11:36:49++ deactivate nondestructive
11:36:49++ '[' -n '' ']'
11:36:49++ '[' -n '' ']'
11:36:49++ hash -r
11:36:49++ '[' -n '' ']'
11:36:49++ unset VIRTUAL_ENV
11:36:49++ unset VIRTUAL_ENV_PROMPT
11:36:49++ '[' '!' nondestructive = nondestructive ']'
11:36:49++ VIRTUAL_ENV=/home/omero/workspace/OMERO-push/venv
11:36:49++ export VIRTUAL_ENV
11:36:49++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
11:36:49++ PATH=/home/omero/workspace/OMERO-push/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
11:36:49++ export PATH
11:36:49++ '[' -n '' ']'
11:36:49++ '[' -z '' ']'
11:36:49++ _OLD_VIRTUAL_PS1=
11:36:49++ PS1='(venv) '
11:36:49++ export PS1
11:36:49++ VIRTUAL_ENV_PROMPT='(venv) '
11:36:49++ export VIRTUAL_ENV_PROMPT
11:36:49++ hash -r
11:36:49+ pip install -U pip
11:36:50Requirement already satisfied: pip in ./venv/lib64/python3.11/site-packages (25.0.1)
11:36:50+ pip install -U scc
11:36:50Requirement already satisfied: scc in ./venv/lib64/python3.11/site-packages (0.20.0)
11:36:50Requirement already satisfied: PyGithub>=1.54 in ./venv/lib64/python3.11/site-packages (from scc) (2.6.1)
11:36:50Requirement already satisfied: PyYAML>=5.1 in ./venv/lib64/python3.11/site-packages (from scc) (6.0.2)
11:36:50Requirement already satisfied: future in ./venv/lib64/python3.11/site-packages (from scc) (1.0.0)
11:36:50Requirement already satisfied: ruamel.yaml in ./venv/lib64/python3.11/site-packages (from scc) (0.18.10)
11:36:50Requirement already satisfied: ruamel.yaml.jinja2 in ./venv/lib64/python3.11/site-packages (from scc) (0.2.7)
11:36:50Requirement already satisfied: six in ./venv/lib64/python3.11/site-packages (from scc) (1.17.0)
11:36:50Requirement already satisfied: urllib3<2 in ./venv/lib64/python3.11/site-packages (from scc) (1.26.20)
11:36:50Requirement already satisfied: yaclifw<0.3,>=0.2.0 in ./venv/lib64/python3.11/site-packages (from scc) (0.2.0)
11:36:50Requirement already satisfied: pynacl>=1.4.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (1.5.0)
11:36:50Requirement already satisfied: requests>=2.14.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (2.32.3)
11:36:50Requirement already satisfied: pyjwt>=2.4.0 in ./venv/lib64/python3.11/site-packages (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (2.10.1)
11:36:50Requirement already satisfied: typing-extensions>=4.0.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (4.13.0)
11:36:50Requirement already satisfied: Deprecated in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (1.2.18)
11:36:50Requirement already satisfied: ruamel.yaml.clib>=0.2.7 in ./venv/lib64/python3.11/site-packages (from ruamel.yaml->scc) (0.2.12)
11:36:50Requirement already satisfied: cryptography>=3.4.0 in ./venv/lib64/python3.11/site-packages (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (44.0.2)
11:36:50Requirement already satisfied: cffi>=1.4.1 in ./venv/lib64/python3.11/site-packages (from pynacl>=1.4.0->PyGithub>=1.54->scc) (1.17.1)
11:36:50Requirement already satisfied: charset-normalizer<4,>=2 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (3.4.1)
11:36:50Requirement already satisfied: idna<4,>=2.5 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (3.10)
11:36:50Requirement already satisfied: certifi>=2017.4.17 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (2025.1.31)
11:36:50Requirement already satisfied: wrapt<2,>=1.10 in ./venv/lib64/python3.11/site-packages (from Deprecated->PyGithub>=1.54->scc) (1.17.2)
11:36:50Requirement already satisfied: pycparser in ./venv/lib64/python3.11/site-packages (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) (2.22)
11:36:50+ test -e src
11:36:50+ cd src
11:36:50++ git config github.user
11:36:50+ user=snoopycrimecop
11:36:50+ scc merge develop --no-ask --reset --shallow -S success-only
11:36:542025-04-08 11:36:54,760 [ scc.merge] INFO Merging Pull Request(s) based on develop
11:36:542025-04-08 11:36:54,761 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
11:36:542025-04-08 11:36:54,761 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
11:36:542025-04-08 11:36:54,761 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
11:36:542025-04-08 11:36:54,761 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
11:36:542025-04-08 11:36:54,761 [ scc.merge] INFO Excluding Pull Request(s) without successful status
11:37:132025-04-08 11:37:13,207 [ scc.merge] INFO Repository: ome/openmicroscopy
11:37:132025-04-08 11:37:13,207 [ scc.merge] INFO Excluded PRs:
11:37:132025-04-08 11:37:13,207 [ scc.merge] INFO - PR 6319 dominikl 'Add integration test for joining session' (exclude comment)
11:37:132025-04-08 11:37:13,207 [ scc.merge] INFO - PR 6212 jburel 'add test to import images' (exclude comment)
11:37:132025-04-08 11:37:13,207 [ scc.merge] INFO - PR 6086 manics 'Alternative JSON configuration system for OMERO.web' (label: exclude)
11:37:132025-04-08 11:37:13,207 [ scc.merge] INFO Already up to date.
11:37:132025-04-08 11:37:13,207 [ scc.merge] INFO
11:37:132025-04-08 11:37:13,207 [ scc.merge] INFO Merged PRs:
11:37:132025-04-08 11:37:13,207 [ scc.merge] INFO - PR 6309 jburel 'add try block'
11:37:132025-04-08 11:37:13,207 [ scc.merge] INFO - PR 6353 jburel 'remove dependencies'
11:37:132025-04-08 11:37:13,207 [ scc.merge] INFO - PR 6423 jburel 'Use \d'
11:37:132025-04-08 11:37:13,207 [ scc.merge] INFO - PR 6428 sbesson 'Remove MaxPermSize flag in the build system'
11:37:132025-04-08 11:37:13,207 [ scc.merge] INFO
11:37:13+ cp etc/omero.properties etc/omero.properties.bak
11:37:13+ rm etc/omero.properties
11:37:13+ touch etc/omero.properties
11:37:13++ sed -n '/Internal dependencies/=' etc/omero.properties.bak
11:37:13+ ne=249
11:37:13++ sed -n 1,249p etc/omero.properties.bak
11:37:13+ line='##
11:37:13## omero.properties
11:37:13## ----------------
11:37:13##
11:37:13## DO NOT EDIT!
11:37:13##
11:37:13##
11:37:13## Any of these properties can be altered by using `omero config`. MODIFYING
11:37:13## THIS FILE DOES NOT ALTER SERVER BEHAVIOR. It solely defines the defaults
11:37:13## at compile time!
11:37:13##
11:37:13## For an overview of these properties, see
11:37:13## https://docs.openmicroscopy.org/latest/omero/sysadmins/config.html11:37:13##
11:37:13## Properties marked with "DEVELOPMENT" should not be used in production.
11:37:1311:37:13# Comma separated list of Ice transports available to clients. The default
11:37:13# value ("ssl,tcp") instructs Ice to open the ports specified by the
11:37:13# omero.ports.ssl and omero.ports.tcp properties. Restricting to "ssl"
11:37:13# will prevent all non-encrypted connections to the OMERO server.
11:37:13#
11:37:13# Additionally, there are two experimental values for using websockets:
11:37:13# "ws" and "wss" for unencrypted and encrypted, respectively. The ports
11:37:13# that are opened are controlled by the omero.ports.ws and omero.ports.wss
11:37:13# properties. To enable all possible protocols use: "ssl,tcp,wss,ws".
11:37:13#
11:37:13# Note: When using websockets behind a web server like nginx, additional
11:37:13# configuration may be needed.
11:37:13omero.client.icetransports=ssl,tcp
11:37:1311:37:13# The prefix to apply to all port numbers (SSL, TCP, registry) used by the
11:37:13# server
11:37:13omero.ports.prefix=
11:37:1311:37:13# The Glacier2 SSL port number to use
11:37:13omero.ports.ssl=4064
11:37:1311:37:13# The Glacier2 TCP port number to use (unencrypted)
11:37:13omero.ports.tcp=4063
11:37:1311:37:13# The Glacier2 WSS port number to use
11:37:13omero.ports.wss=4066
11:37:1311:37:13# The Glacier2 WS port number to use (unencrypted)
11:37:13omero.ports.ws=4065
11:37:1311:37:13# The IceGrid registry port number to use
11:37:13omero.ports.registry=4061
11:37:1311:37:13#############################################
11:37:13## JVM configuration
11:37:13##
11:37:13## Note: changes to the omero.jvmcfg properties
11:37:13## will *not* be reflected in OMERO.server
11:37:13## since they are defined in OMERO.py.
11:37:13#############################################
11:37:13## (For documentation only)
11:37:13# Memory strategy which will be used by default.
11:37:13# Options include: percent, manual
11:37:13omero.jvmcfg.strategy=percent
11:37:1311:37:13## (For documentation only)
11:37:13# Explicit value for the `-Xmx` argument, e.g.
11:37:13# "1g"
11:37:13omero.jvmcfg.heap_size=
11:37:1311:37:13## (For documentation only)
11:37:13# Explicit value for the MaxPermSize argument
11:37:13# to the JVM, e.g. "500M". Ignored for Java8+
11:37:13omero.jvmcfg.perm_gen=
11:37:1311:37:13## (For documentation only)
11:37:13# Toggles on or off heap dumps on OOMs. Default is "off".
11:37:13# The special value "tmp" will create the heap dumps in
11:37:13# your temp directory.
11:37:13omero.jvmcfg.heap_dump=
11:37:1311:37:13## (For documentation only)
11:37:13# Used only by the percent strategy. An integer between 0
11:37:13# and 100 which is the percent of active memory that will
11:37:13# be used by the service.
11:37:13omero.jvmcfg.percent=
11:37:1311:37:13## (For documentation only)
11:37:13# Contains other parameters which should be passed to the
11:37:13# JVM. The value of "append" is treated as if it were on
11:37:13# the command line so will be separated on whitespace.
11:37:13# For example, '\''-XX:-PrintGC -XX:+UseCompressedOops'\'' would
11:37:13# results in two new arguments.
11:37:13# Note that when using `config set` from the command line
11:37:13# one may need to give a prior `--` option to prevent a value
11:37:13# starting with `-` from already being parsed as an option,
11:37:13# and values may need quoting to prevent whitespace or other
11:37:13# significant characters from being interpreted prematurely.
11:37:1311:37:13omero.jvmcfg.append=
11:37:1311:37:13## (For documentation only)
11:37:13# Manual override of the total system memory that
11:37:13# OMERO will *think* is present on the local OS (MB).
11:37:13# If unset, an attempt will be made to detect the actual
11:37:13# amount: first by using the Python library `psutil` and
11:37:13# if that is not installed, by running a Java tool. If
11:37:13# neither works, 4.0GB is assumed.
11:37:13omero.jvmcfg.system_memory=
11:37:1311:37:13## (For documentation only)
11:37:13# Suggestion for strategies as to the minimum memory
11:37:13# that they will use for calculating JVM settings (MB).
11:37:13omero.jvmcfg.min_system_memory=3414
11:37:1311:37:13## (For documentation only)
11:37:13# Suggestion for strategies as to the maximum memory
11:37:13# that they will use for calculating JVM settings (MB).
11:37:13omero.jvmcfg.max_system_memory=48000
11:37:1311:37:1311:37:13#############################################
11:37:13## Logging properties
11:37:13##
11:37:13## Note: changes to the default omero.logging values in
11:37:13## this file will *not* be reflected in OMERO.server
11:37:13## since they are defined in OMERO.py
11:37:13#############################################
11:37:1311:37:13## (For documentation only)
11:37:13# Relative server directory where the log files should be stored.
11:37:13omero.logging.directory=var/log/
11:37:1311:37:13## (For documentation only)
11:37:13# Whether the server log files should be rotated at a certain time
11:37:13# interval. If true, log files will be rolled over at midnight.
11:37:13# Otherwise, log files will be rolled over at a predetermined size,
11:37:13# see omero.logging.logsize for more information.
11:37:13omero.logging.timedlog=false
11:37:1311:37:13## (For documentation only)
11:37:13# If omero.logging.timedlog is false or unset, specifies the
11:37:13# maximum size of the server log files in bytes above which a
11:37:13# new log file should be created.
11:37:13omero.logging.logsize=5000000
11:37:1311:37:13## (For documentation only)
11:37:13# If omero.logging.timedlog is false or unset, specifies the
11:37:13# number of old server log files that should be kept. Old log
11:37:13# files will be saved by appending the extensions '\''.1'\'', '\''.2'\'' etc.
11:37:13omero.logging.lognum=9
11:37:1311:37:13## (For documentation only)
11:37:13# Specifies the threshold for the Python servers log files. Logging messages
11:37:13# which are less severe than this value will be ignored. For a list of
11:37:13# available values, see https://docs.python.org/3/library/logging.html#levels.
11:37:13omero.logging.level=20
11:37:1311:37:13#############################################
11:37:13## Ice overrides
11:37:13##
11:37:13## Though not used directly by OMERO, a number
11:37:13## of properties prefixed with "Ice.*" will
11:37:13## alter the behavior of the OMERO runtime
11:37:13## by configuring the Ice communicators. For a
11:37:13## full listing see:
11:37:13##
11:37:13## http://doc.zeroc.com/display/Ice/Property+Reference11:37:13## For more information see
11:37:13## https://docs.openmicroscopy.org/latest/omero/sysadmins/troubleshooting.html#server-fails-to-start11:37:13#############################################
11:37:1311:37:13# Disable IPv6 by setting to 0. Only needed in
11:37:13# certain situations.
11:37:13Ice.IPv6=1
11:37:1311:37:13# Glacier2Template IceSSL defaults and overrides,
11:37:13# see https://doc.zeroc.com/ice/3.6/property-reference/icessl.
11:37:13# Any property beginning ``omero.glacier2.IceSSL.`` will be used to
11:37:13# update the corresponding IceSSL. property.
11:37:13omero.glacier2.IceSSL=
11:37:1311:37:13# Glacier2Template SSL maximum allowed protocol (mac bug)
11:37:13omero.glacier2.IceSSL.ProtocolVersionMax=tls1_1
11:37:13# Glacier2Template SSL allowed cipher suites
11:37:13omero.glacier2.IceSSL.Ciphers=ADH:!LOW:!MD5:!EXP:!3DES:@STRENGTH
11:37:13# Glacier2Template SSL verification requirements
11:37:13omero.glacier2.IceSSL.VerifyPeer=0
11:37:13# Glacier2Template SSL allowed protocols
11:37:13omero.glacier2.IceSSL.Protocols=tls1
11:37:1311:37:13# Override the default set of OMERO services.
11:37:13# For example, to run OMERO.server with Blitz and Tables only
11:37:13# (i.e. disable Processor, DropBox, Indexer, PixelData)
11:37:13# set this to ``master:Blitz-0,Tables-0``.
11:37:13# Also use this to distribute OMERO services across multiple nodes,
11:37:13# for example:
11:37:13# ``master:Blitz-0,Tables-0 worker1:Processor-0``.
11:37:13# See
11:37:13# https://docs.openmicroscopy.org/omero/latest/sysadmins/grid.html#deployment-examples11:37:13omero.server.nodedescriptors=
11:37:1311:37:13#############################################
11:37:13## Darwin (OS X) specific defaults for templated configuration files only.
11:37:13## ``_xxx.yyy.darwin`` properties will override xxx.yyy properties in this
11:37:13## file.
11:37:13## Do not set these properties in ``omero config``, instead set the original
11:37:13## ``xxx.yyy`` property
11:37:13#############################################
11:37:13_omero.glacier2.IceSSL.Ciphers.darwin=(AES)
11:37:1311:37:13## (For documentation only)
11:37:13# Name of the Python module to use when starting the Tables service
11:37:13omero.tables.module=runTables
11:37:1311:37:13#############################################
11:37:13## Server product name for release artifacts
11:37:13#############################################
11:37:13product.name=OMERO.server
11:37:1311:37:13#############################################
11:37:13### Properties below this marker are ignored by
11:37:13### omero.install.config_parser.PropertyParser
11:37:13### END
11:37:1311:37:13#############################################
11:37:13## Library versions
11:37:13#############################################
11:37:13##
11:37:13versions.findbugs=1.2.1
11:37:13versions.ice36=3.6.5
11:37:13versions.ice36_lib=36
11:37:13## internal
11:37:13versions.omeroshares36=3.6.3
11:37:13versions.omeromock36=3.6.3
11:37:13versions.icedb36=3.6.3
11:37:13versions.ipython=1.2.1
11:37:1311:37:13versions.janino=2.5.10
11:37:1311:37:13versions.reportng=1.1.1
11:37:1311:37:13versions.testng=7.5
11:37:13versions.velocity=1.4
11:37:1311:37:13versions.omero-pypi=https://pypi.io/packages/source/o/PACKAGE11:37:13versions.omero-scripts-url=${versions.omero-pypi}
11:37:1311:37:13###
11:37:13### Appended Values
11:37:13###
11:37:1311:37:13## Internal dependencies'
11:37:13+ echo '##
11:37:13## omero.properties
11:37:13## ----------------
11:37:13##
11:37:13## DO NOT EDIT!
11:37:13##
11:37:13##
11:37:13## Any of these properties can be altered by using `omero config`. MODIFYING
11:37:13## THIS FILE DOES NOT ALTER SERVER BEHAVIOR. It solely defines the defaults
11:37:13## at compile time!
11:37:13##
11:37:13## For an overview of these properties, see
11:37:13## https://docs.openmicroscopy.org/latest/omero/sysadmins/config.html11:37:13##
11:37:13## Properties marked with "DEVELOPMENT" should not be used in production.
11:37:1311:37:13# Comma separated list of Ice transports available to clients. The default
11:37:13# value ("ssl,tcp") instructs Ice to open the ports specified by the
11:37:13# omero.ports.ssl and omero.ports.tcp properties. Restricting to "ssl"
11:37:13# will prevent all non-encrypted connections to the OMERO server.
11:37:13#
11:37:13# Additionally, there are two experimental values for using websockets:
11:37:13# "ws" and "wss" for unencrypted and encrypted, respectively. The ports
11:37:13# that are opened are controlled by the omero.ports.ws and omero.ports.wss
11:37:13# properties. To enable all possible protocols use: "ssl,tcp,wss,ws".
11:37:13#
11:37:13# Note: When using websockets behind a web server like nginx, additional
11:37:13# configuration may be needed.
11:37:13omero.client.icetransports=ssl,tcp
11:37:1311:37:13# The prefix to apply to all port numbers (SSL, TCP, registry) used by the
11:37:13# server
11:37:13omero.ports.prefix=
11:37:1311:37:13# The Glacier2 SSL port number to use
11:37:13omero.ports.ssl=4064
11:37:1311:37:13# The Glacier2 TCP port number to use (unencrypted)
11:37:13omero.ports.tcp=4063
11:37:1311:37:13# The Glacier2 WSS port number to use
11:37:13omero.ports.wss=4066
11:37:1311:37:13# The Glacier2 WS port number to use (unencrypted)
11:37:13omero.ports.ws=4065
11:37:1311:37:13# The IceGrid registry port number to use
11:37:13omero.ports.registry=4061
11:37:1311:37:13#############################################
11:37:13## JVM configuration
11:37:13##
11:37:13## Note: changes to the omero.jvmcfg properties
11:37:13## will *not* be reflected in OMERO.server
11:37:13## since they are defined in OMERO.py.
11:37:13#############################################
11:37:13## (For documentation only)
11:37:13# Memory strategy which will be used by default.
11:37:13# Options include: percent, manual
11:37:13omero.jvmcfg.strategy=percent
11:37:1311:37:13## (For documentation only)
11:37:13# Explicit value for the `-Xmx` argument, e.g.
11:37:13# "1g"
11:37:13omero.jvmcfg.heap_size=
11:37:1311:37:13## (For documentation only)
11:37:13# Explicit value for the MaxPermSize argument
11:37:13# to the JVM, e.g. "500M". Ignored for Java8+
11:37:13omero.jvmcfg.perm_gen=
11:37:1311:37:13## (For documentation only)
11:37:13# Toggles on or off heap dumps on OOMs. Default is "off".
11:37:13# The special value "tmp" will create the heap dumps in
11:37:13# your temp directory.
11:37:13omero.jvmcfg.heap_dump=
11:37:1311:37:13## (For documentation only)
11:37:13# Used only by the percent strategy. An integer between 0
11:37:13# and 100 which is the percent of active memory that will
11:37:13# be used by the service.
11:37:13omero.jvmcfg.percent=
11:37:1311:37:13## (For documentation only)
11:37:13# Contains other parameters which should be passed to the
11:37:13# JVM. The value of "append" is treated as if it were on
11:37:13# the command line so will be separated on whitespace.
11:37:13# For example, '\''-XX:-PrintGC -XX:+UseCompressedOops'\'' would
11:37:13# results in two new arguments.
11:37:13# Note that when using `config set` from the command line
11:37:13# one may need to give a prior `--` option to prevent a value
11:37:13# starting with `-` from already being parsed as an option,
11:37:13# and values may need quoting to prevent whitespace or other
11:37:13# significant characters from being interpreted prematurely.
11:37:1311:37:13omero.jvmcfg.append=
11:37:1311:37:13## (For documentation only)
11:37:13# Manual override of the total system memory that
11:37:13# OMERO will *think* is present on the local OS (MB).
11:37:13# If unset, an attempt will be made to detect the actual
11:37:13# amount: first by using the Python library `psutil` and
11:37:13# if that is not installed, by running a Java tool. If
11:37:13# neither works, 4.0GB is assumed.
11:37:13omero.jvmcfg.system_memory=
11:37:1311:37:13## (For documentation only)
11:37:13# Suggestion for strategies as to the minimum memory
11:37:13# that they will use for calculating JVM settings (MB).
11:37:13omero.jvmcfg.min_system_memory=3414
11:37:1311:37:13## (For documentation only)
11:37:13# Suggestion for strategies as to the maximum memory
11:37:13# that they will use for calculating JVM settings (MB).
11:37:13omero.jvmcfg.max_system_memory=48000
11:37:1311:37:1311:37:13#############################################
11:37:13## Logging properties
11:37:13##
11:37:13## Note: changes to the default omero.logging values in
11:37:13## this file will *not* be reflected in OMERO.server
11:37:13## since they are defined in OMERO.py
11:37:13#############################################
11:37:1311:37:13## (For documentation only)
11:37:13# Relative server directory where the log files should be stored.
11:37:13omero.logging.directory=var/log/
11:37:1311:37:13## (For documentation only)
11:37:13# Whether the server log files should be rotated at a certain time
11:37:13# interval. If true, log files will be rolled over at midnight.
11:37:13# Otherwise, log files will be rolled over at a predetermined size,
11:37:13# see omero.logging.logsize for more information.
11:37:13omero.logging.timedlog=false
11:37:1311:37:13## (For documentation only)
11:37:13# If omero.logging.timedlog is false or unset, specifies the
11:37:13# maximum size of the server log files in bytes above which a
11:37:13# new log file should be created.
11:37:13omero.logging.logsize=5000000
11:37:1311:37:13## (For documentation only)
11:37:13# If omero.logging.timedlog is false or unset, specifies the
11:37:13# number of old server log files that should be kept. Old log
11:37:13# files will be saved by appending the extensions '\''.1'\'', '\''.2'\'' etc.
11:37:13omero.logging.lognum=9
11:37:1311:37:13## (For documentation only)
11:37:13# Specifies the threshold for the Python servers log files. Logging messages
11:37:13# which are less severe than this value will be ignored. For a list of
11:37:13# available values, see https://docs.python.org/3/library/logging.html#levels.
11:37:13omero.logging.level=20
11:37:1311:37:13#############################################
11:37:13## Ice overrides
11:37:13##
11:37:13## Though not used directly by OMERO, a number
11:37:13## of properties prefixed with "Ice.*" will
11:37:13## alter the behavior of the OMERO runtime
11:37:13## by configuring the Ice communicators. For a
11:37:13## full listing see:
11:37:13##
11:37:13## http://doc.zeroc.com/display/Ice/Property+Reference11:37:13## For more information see
11:37:13## https://docs.openmicroscopy.org/latest/omero/sysadmins/troubleshooting.html#server-fails-to-start11:37:13#############################################
11:37:1311:37:13# Disable IPv6 by setting to 0. Only needed in
11:37:13# certain situations.
11:37:13Ice.IPv6=1
11:37:1311:37:13# Glacier2Template IceSSL defaults and overrides,
11:37:13# see https://doc.zeroc.com/ice/3.6/property-reference/icessl.
11:37:13# Any property beginning ``omero.glacier2.IceSSL.`` will be used to
11:37:13# update the corresponding IceSSL. property.
11:37:13omero.glacier2.IceSSL=
11:37:1311:37:13# Glacier2Template SSL maximum allowed protocol (mac bug)
11:37:13omero.glacier2.IceSSL.ProtocolVersionMax=tls1_1
11:37:13# Glacier2Template SSL allowed cipher suites
11:37:13omero.glacier2.IceSSL.Ciphers=ADH:!LOW:!MD5:!EXP:!3DES:@STRENGTH
11:37:13# Glacier2Template SSL verification requirements
11:37:13omero.glacier2.IceSSL.VerifyPeer=0
11:37:13# Glacier2Template SSL allowed protocols
11:37:13omero.glacier2.IceSSL.Protocols=tls1
11:37:1311:37:13# Override the default set of OMERO services.
11:37:13# For example, to run OMERO.server with Blitz and Tables only
11:37:13# (i.e. disable Processor, DropBox, Indexer, PixelData)
11:37:13# set this to ``master:Blitz-0,Tables-0``.
11:37:13# Also use this to distribute OMERO services across multiple nodes,
11:37:13# for example:
11:37:13# ``master:Blitz-0,Tables-0 worker1:Processor-0``.
11:37:13# See
11:37:13# https://docs.openmicroscopy.org/omero/latest/sysadmins/grid.html#deployment-examples11:37:13omero.server.nodedescriptors=
11:37:1311:37:13#############################################
11:37:13## Darwin (OS X) specific defaults for templated configuration files only.
11:37:13## ``_xxx.yyy.darwin`` properties will override xxx.yyy properties in this
11:37:13## file.
11:37:13## Do not set these properties in ``omero config``, instead set the original
11:37:13## ``xxx.yyy`` property
11:37:13#############################################
11:37:13_omero.glacier2.IceSSL.Ciphers.darwin=(AES)
11:37:1311:37:13## (For documentation only)
11:37:13# Name of the Python module to use when starting the Tables service
11:37:13omero.tables.module=runTables
11:37:1311:37:13#############################################
11:37:13## Server product name for release artifacts
11:37:13#############################################
11:37:13product.name=OMERO.server
11:37:1311:37:13#############################################
11:37:13### Properties below this marker are ignored by
11:37:13### omero.install.config_parser.PropertyParser
11:37:13### END
11:37:1311:37:13#############################################
11:37:13## Library versions
11:37:13#############################################
11:37:13##
11:37:13versions.findbugs=1.2.1
11:37:13versions.ice36=3.6.5
11:37:13versions.ice36_lib=36
11:37:13## internal
11:37:13versions.omeroshares36=3.6.3
11:37:13versions.omeromock36=3.6.3
11:37:13versions.icedb36=3.6.3
11:37:13versions.ipython=1.2.1
11:37:1311:37:13versions.janino=2.5.10
11:37:1311:37:13versions.reportng=1.1.1
11:37:1311:37:13versions.testng=7.5
11:37:13versions.velocity=1.4
11:37:1311:37:13versions.omero-pypi=https://pypi.io/packages/source/o/PACKAGE11:37:13versions.omero-scripts-url=${versions.omero-pypi}
11:37:1311:37:13###
11:37:13### Appended Values
11:37:13###
11:37:1311:37:13## Internal dependencies'
11:37:13+ echo versions.omero-pypi=https://merge-ci.openmicroscopy.org/jenkins//job/OMERO-python-superbuild-build/lastSuccessfulBuild/artifact/PACKAGE/dist/11:37:13+ echo versions.omero-github=https://github.com/snoopycrimecop/PACKAGE/archive11:37:13+ echo versions.scripts-prefix=
11:37:13+ echo versions.scripts=merge_ci
11:37:13+ cat /home/omero/workspace/OMERO-push/version.properties
11:37:13+ git commit -a -m 'Add version.properties to etc/omero.properties'
11:37:13[detached HEAD fdc7be2b32] Add version.properties to etc/omero.properties
11:37:13 1 file changed, 46 insertions(+), 7 deletions(-)
11:37:13+ git push -f git@github.com:snoopycrimecop/openmicroscopy.git HEAD:refs/heads/merge_ci
11:37:14To github.com:snoopycrimecop/openmicroscopy.git
11:37:14 + 765bb833e1...fdc7be2b32 HEAD -> merge_ci (forced update)
11:37:14Finished: SUCCESS
![[Jenkins]](/jenkins/static/9bac06d9/images/svgs/logo.svg){kind=logo}
