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05:26:48 Started by upstream project "Trigger" build number 49
05:26:48 originally caused by:
05:26:48  Started by user devspace
05:26:48 Running as SYSTEM
05:26:48 Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-push
05:26:48 The recommended git tool is: NONE
05:26:48 No credentials specified
05:26:48  > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-push/src/.git # timeout=10
05:26:48 Fetching changes from the remote Git repository
05:26:48  > git config remote.origin.url https://github.com/ome/openmicroscopy.git # timeout=10
05:26:48 Fetching upstream changes from https://github.com/ome/openmicroscopy.git
05:26:48  > git --version # timeout=10
05:26:48  > git --version # 'git version 2.39.3'
05:26:48  > git fetch --tags --force --progress -- https://github.com/ome/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
05:26:52  > git rev-parse origin/develop^{commit} # timeout=10
05:26:52 Checking out Revision 961096a3710eb8fb6efc46bb69b91f9be98b769f (origin/develop)
05:26:52  > git config core.sparsecheckout # timeout=10
05:26:52  > git checkout -f 961096a3710eb8fb6efc46bb69b91f9be98b769f # timeout=30
05:26:53 Commit message: "Merge pull request #6378 from DavidStirling/ann_names"
05:26:53  > git rev-list --no-walk 961096a3710eb8fb6efc46bb69b91f9be98b769f # timeout=10
05:26:53 Cleaning workspace
05:26:53  > git rev-parse --verify HEAD # timeout=10
05:26:53 Resetting working tree
05:26:53  > git reset --hard # timeout=10
05:26:53  > git clean -fdx # timeout=10
05:26:53 Copied 1 artifact from "OMERO-python-superbuild-build" build number 40
05:26:53 [OMERO-push] $ /bin/bash -xe /tmp/jenkins16587712632316583195.sh
05:26:53 + python3 -mvenv venv
05:26:55 + source /home/omero/workspace/OMERO-push/venv/bin/activate
05:26:55 ++ deactivate nondestructive
05:26:55 ++ '[' -n '' ']'
05:26:55 ++ '[' -n '' ']'
05:26:55 ++ '[' -n /bin/bash -o -n '' ']'
05:26:55 ++ hash -r
05:26:55 ++ '[' -n '' ']'
05:26:55 ++ unset VIRTUAL_ENV
05:26:55 ++ '[' '!' nondestructive = nondestructive ']'
05:26:55 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-push/venv
05:26:55 ++ export VIRTUAL_ENV
05:26:55 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
05:26:55 ++ PATH=/home/omero/workspace/OMERO-push/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
05:26:55 ++ export PATH
05:26:55 ++ '[' -n '' ']'
05:26:55 ++ '[' -z '' ']'
05:26:55 ++ _OLD_VIRTUAL_PS1=
05:26:55 ++ PS1='(venv) '
05:26:55 ++ export PS1
05:26:55 ++ '[' -n /bin/bash -o -n '' ']'
05:26:55 ++ hash -r
05:26:55 + pip install -U pip
05:26:58 Requirement already satisfied: pip in ./venv/lib/python3.9/site-packages (24.0)
05:26:58 + pip install -U scc
05:26:59 Requirement already satisfied: scc in ./venv/lib/python3.9/site-packages (0.19.1)
05:26:59 Requirement already satisfied: PyGithub>=1.54 in ./venv/lib/python3.9/site-packages (from scc) (2.2.0)
05:26:59 Requirement already satisfied: PyYAML>=5.1 in ./venv/lib/python3.9/site-packages (from scc) (6.0.1)
05:26:59 Requirement already satisfied: future in ./venv/lib/python3.9/site-packages (from scc) (1.0.0)
05:26:59 Requirement already satisfied: ruamel.yaml in ./venv/lib/python3.9/site-packages (from scc) (0.18.6)
05:26:59 Requirement already satisfied: ruamel.yaml.jinja2 in ./venv/lib/python3.9/site-packages (from scc) (0.2.7)
05:26:59 Requirement already satisfied: six in ./venv/lib/python3.9/site-packages (from scc) (1.16.0)
05:26:59 Requirement already satisfied: urllib3<2 in ./venv/lib/python3.9/site-packages (from scc) (1.26.18)
05:26:59 Requirement already satisfied: yaclifw<0.3,>=0.2.0 in ./venv/lib/python3.9/site-packages (from scc) (0.2.0)
05:26:59 Requirement already satisfied: pynacl>=1.4.0 in ./venv/lib/python3.9/site-packages (from PyGithub>=1.54->scc) (1.5.0)
05:26:59 Requirement already satisfied: requests>=2.14.0 in ./venv/lib/python3.9/site-packages (from PyGithub>=1.54->scc) (2.31.0)
05:26:59 Requirement already satisfied: pyjwt>=2.4.0 in ./venv/lib/python3.9/site-packages (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (2.8.0)
05:26:59 Requirement already satisfied: typing-extensions>=4.0.0 in ./venv/lib/python3.9/site-packages (from PyGithub>=1.54->scc) (4.10.0)
05:26:59 Requirement already satisfied: Deprecated in ./venv/lib/python3.9/site-packages (from PyGithub>=1.54->scc) (1.2.14)
05:26:59 Requirement already satisfied: ruamel.yaml.clib>=0.2.7 in ./venv/lib/python3.9/site-packages (from ruamel.yaml->scc) (0.2.8)
05:26:59 Requirement already satisfied: cryptography>=3.4.0 in ./venv/lib/python3.9/site-packages (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (42.0.5)
05:26:59 Requirement already satisfied: cffi>=1.4.1 in ./venv/lib/python3.9/site-packages (from pynacl>=1.4.0->PyGithub>=1.54->scc) (1.16.0)
05:26:59 Requirement already satisfied: charset-normalizer<4,>=2 in ./venv/lib/python3.9/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (3.3.2)
05:26:59 Requirement already satisfied: idna<4,>=2.5 in ./venv/lib/python3.9/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (3.6)
05:26:59 Requirement already satisfied: certifi>=2017.4.17 in ./venv/lib/python3.9/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (2024.2.2)
05:26:59 Requirement already satisfied: wrapt<2,>=1.10 in ./venv/lib/python3.9/site-packages (from Deprecated->PyGithub>=1.54->scc) (1.16.0)
05:26:59 Requirement already satisfied: pycparser in ./venv/lib/python3.9/site-packages (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) (2.21)
05:26:59 + test -e src
05:26:59 + cd src
05:26:59 ++ git config github.user
05:26:59 + user=snoopycrimecop
05:26:59 + scc merge develop --no-ask --reset --shallow -S success-only
05:27:06 2024-04-23 05:27:06,236 [   scc.merge] INFO  Merging Pull Request(s) based on develop
05:27:06 2024-04-23 05:27:06,237 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
05:27:06 2024-04-23 05:27:06,237 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
05:27:06 2024-04-23 05:27:06,237 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
05:27:06 2024-04-23 05:27:06,237 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
05:27:06 2024-04-23 05:27:06,237 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
05:27:31 2024-04-23 05:27:31,779 [   scc.merge] INFO  Repository: ome/openmicroscopy
05:27:31 2024-04-23 05:27:31,779 [   scc.merge] INFO  Excluded PRs:
05:27:31 2024-04-23 05:27:31,779 [   scc.merge] INFO    - PR 6379 jburel 'TMP: build david's s3 Zarr branch' (exclude comment)
05:27:31 2024-04-23 05:27:31,779 [   scc.merge] INFO    - PR 6376 snoopycrimecop 'update dependencies' (status: failure)
05:27:31 2024-04-23 05:27:31,779 [   scc.merge] INFO    - PR 6347 sbesson 'Upgrade Ivy to 2.5.1' (label: exclude)
05:27:31 2024-04-23 05:27:31,779 [   scc.merge] INFO    - PR 6319 dominikl 'Add integration test for joining session' (exclude comment)
05:27:31 2024-04-23 05:27:31,779 [   scc.merge] INFO    - PR 6275 joshmoore 'Add OMERO5.4__1 for omero-model#71' (exclude comment)
05:27:31 2024-04-23 05:27:31,779 [   scc.merge] INFO    - PR 6212 jburel 'add test to import images' (exclude comment)
05:27:31 2024-04-23 05:27:31,779 [   scc.merge] INFO    - PR 6086 manics 'Alternative JSON configuration system for OMERO.web' (label: exclude)
05:27:31 2024-04-23 05:27:31,779 [   scc.merge] INFO  Already up to date.
05:27:31 2024-04-23 05:27:31,779 [   scc.merge] INFO  
05:27:31 2024-04-23 05:27:31,779 [   scc.merge] INFO  Merged PRs:
05:27:31 2024-04-23 05:27:31,779 [   scc.merge] INFO    - PR 6309 jburel 'add try block'
05:27:31 2024-04-23 05:27:31,779 [   scc.merge] INFO    - PR 6353 jburel 'remove dependencies'
05:27:31 2024-04-23 05:27:31,779 [   scc.merge] INFO    - PR 6377 sbesson 'Removal of python-future compatibility'
05:27:31 2024-04-23 05:27:31,779 [   scc.merge] INFO    - PR 6381 jburel 'Session creation'
05:27:31 2024-04-23 05:27:31,779 [   scc.merge] INFO    - PR 6384 jburel 'Scripts update'
05:27:31 2024-04-23 05:27:31,779 [   scc.merge] INFO  
05:27:31 + cp etc/omero.properties etc/omero.properties.bak
05:27:31 + rm etc/omero.properties
05:27:31 + touch etc/omero.properties
05:27:31 ++ sed -n '/Internal dependencies/=' etc/omero.properties.bak
05:27:31 + ne=210
05:27:31 ++ sed -n 1,210p etc/omero.properties.bak
05:27:31 + line='##
05:27:31 ## omero.properties
05:27:31 ## ----------------
05:27:31 ##
05:27:31 ## DO NOT EDIT!
05:27:31 ##
05:27:31 ##
05:27:31 ## Any of these properties can be altered by using `omero config`. MODIFYING
05:27:31 ## THIS FILE DOES NOT ALTER SERVER BEHAVIOR. It solely defines the defaults
05:27:31 ## at compile time!
05:27:31 ##
05:27:31 ## For an overview of these properties, see
05:27:31 ## https://docs.openmicroscopy.org/latest/omero/sysadmins/config.html
05:27:31 ##
05:27:31 ## Properties marked with "DEVELOPMENT" should not be used in production.
05:27:31 
05:27:31 # Comma separated list of Ice transports available to clients. The default
05:27:31 # value ("ssl,tcp") instructs Ice to open the ports specified by the
05:27:31 # omero.ports.ssl and omero.ports.tcp properties. Restricting to "ssl"
05:27:31 # will prevent all non-encrypted connections to the OMERO server.
05:27:31 #
05:27:31 # Additionally, there are two experimental values for using websockets:
05:27:31 # "ws" and "wss" for unencrypted and encrypted, respectively. The ports
05:27:31 # that are opened are controlled by the omero.ports.ws and omero.ports.wss
05:27:31 # properties. To enable all possible protocols use: "ssl,tcp,wss,ws".
05:27:31 #
05:27:31 # Note: When using websockets behind a web server like nginx, additional
05:27:31 # configuration may be needed.
05:27:31 omero.client.icetransports=ssl,tcp
05:27:31 
05:27:31 # The prefix to apply to all port numbers (SSL, TCP, registry) used by the
05:27:31 # server
05:27:31 omero.ports.prefix=
05:27:31 
05:27:31 # The Glacier2 SSL port number to use
05:27:31 omero.ports.ssl=4064
05:27:31 
05:27:31 # The Glacier2 TCP port number to use (unencrypted)
05:27:31 omero.ports.tcp=4063
05:27:31 
05:27:31 # The Glacier2 WSS port number to use
05:27:31 omero.ports.wss=4066
05:27:31 
05:27:31 # The Glacier2 WS port number to use (unencrypted)
05:27:31 omero.ports.ws=4065
05:27:31 
05:27:31 # The IceGrid registry port number to use
05:27:31 omero.ports.registry=4061
05:27:31 
05:27:31 #############################################
05:27:31 ## JVM configuration
05:27:31 ##
05:27:31 ## Note: changes to the omero.jvmcfg properties
05:27:31 ## will *not* be reflected in the compiled server
05:27:31 ## since they are defined in a Python file.
05:27:31 #############################################
05:27:31 ## (For documentation only)
05:27:31 # Memory strategy which will be used by default.
05:27:31 # Options include: percent, manual
05:27:31 omero.jvmcfg.strategy=percent
05:27:31 
05:27:31 ## (For documentation only)
05:27:31 # Explicit value for the `-Xmx` argument, e.g.
05:27:31 # "1g"
05:27:31 omero.jvmcfg.heap_size=
05:27:31 
05:27:31 ## (For documentation only)
05:27:31 # Explicit value for the MaxPermSize argument
05:27:31 # to the JVM, e.g. "500M". Ignored for Java8+
05:27:31 omero.jvmcfg.perm_gen=
05:27:31 
05:27:31 ## (For documentation only)
05:27:31 # Toggles on or off heap dumps on OOMs. Default is "off".
05:27:31 # The special value "tmp" will create the heap dumps in
05:27:31 # your temp directory.
05:27:31 omero.jvmcfg.heap_dump=
05:27:31 
05:27:31 ## (For documentation only)
05:27:31 # Used only by the percent strategy. An integer between 0
05:27:31 # and 100 which is the percent of active memory that will
05:27:31 # be used by the service.
05:27:31 omero.jvmcfg.percent=
05:27:31 
05:27:31 ## (For documentation only)
05:27:31 # Contains other parameters which should be passed to the
05:27:31 # JVM. The value of "append" is treated as if it were on
05:27:31 # the command line so will be separated on whitespace.
05:27:31 # For example, '\''-XX:-PrintGC -XX:+UseCompressedOops'\'' would
05:27:31 # results in two new arguments.
05:27:31 # Note that when using `config set` from the command line
05:27:31 # one may need to give a prior `--` option to prevent a value
05:27:31 # starting with `-` from already being parsed as an option,
05:27:31 # and values may need quoting to prevent whitespace or other
05:27:31 # significant characters from being interpreted prematurely.
05:27:31 
05:27:31 omero.jvmcfg.append=
05:27:31 
05:27:31 ## (For documentation only)
05:27:31 # Manual override of the total system memory that
05:27:31 # OMERO will *think* is present on the local OS (MB).
05:27:31 # If unset, an attempt will be made to detect the actual
05:27:31 # amount: first by using the Python library `psutil` and
05:27:31 # if that is not installed, by running a Java tool. If
05:27:31 # neither works, 4.0GB is assumed.
05:27:31 omero.jvmcfg.system_memory=
05:27:31 
05:27:31 ## (For documentation only)
05:27:31 # Suggestion for strategies as to the minimum memory
05:27:31 # that they will use for calculating JVM settings (MB).
05:27:31 omero.jvmcfg.min_system_memory=3414
05:27:31 
05:27:31 ## (For documentation only)
05:27:31 # Suggestion for strategies as to the maximum memory
05:27:31 # that they will use for calculating JVM settings (MB).
05:27:31 omero.jvmcfg.max_system_memory=48000
05:27:31 
05:27:31 
05:27:31 #############################################
05:27:31 ## Ice overrides
05:27:31 ##
05:27:31 ## Though not used directly by OMERO, a number
05:27:31 ## of properties prefixed with "Ice.*" will
05:27:31 ## alter the behavior of the OMERO runtime
05:27:31 ## by configuring the Ice communicators. For a
05:27:31 ## full listing see:
05:27:31 ##
05:27:31 ##   http://doc.zeroc.com/display/Ice/Property+Reference
05:27:31 ## For more information see
05:27:31 ## https://docs.openmicroscopy.org/latest/omero/sysadmins/troubleshooting.html#server-fails-to-start
05:27:31 #############################################
05:27:31 
05:27:31 # Disable IPv6 by setting to 0. Only needed in
05:27:31 # certain situations.
05:27:31 Ice.IPv6=1
05:27:31 
05:27:31 # Glacier2Template IceSSL defaults and overrides,
05:27:31 # see https://doc.zeroc.com/ice/3.6/property-reference/icessl.
05:27:31 # Any property beginning ``omero.glacier2.IceSSL.`` will be used to
05:27:31 # update the corresponding IceSSL. property.
05:27:31 omero.glacier2.IceSSL=
05:27:31 
05:27:31 # Glacier2Template SSL maximum allowed protocol (mac bug)
05:27:31 omero.glacier2.IceSSL.ProtocolVersionMax=tls1_1
05:27:31 # Glacier2Template SSL allowed cipher suites
05:27:31 omero.glacier2.IceSSL.Ciphers=ADH:!LOW:!MD5:!EXP:!3DES:@STRENGTH
05:27:31 # Glacier2Template SSL verification requirements
05:27:31 omero.glacier2.IceSSL.VerifyPeer=0
05:27:31 # Glacier2Template SSL allowed protocols
05:27:31 omero.glacier2.IceSSL.Protocols=tls1
05:27:31 
05:27:31 # Override the default set of OMERO services.
05:27:31 # For example, to run OMERO.server with Blitz and Tables only
05:27:31 # (i.e. disable Processor, DropBox, Indexer, PixelData)
05:27:31 # set this to ``master:Blitz-0,Tables-0``.
05:27:31 # Also use this to distribute OMERO services across multiple nodes,
05:27:31 # for example:
05:27:31 # ``master:Blitz-0,Tables-0 worker1:Processor-0``.
05:27:31 # See
05:27:31 # https://docs.openmicroscopy.org/omero/latest/sysadmins/grid.html#deployment-examples
05:27:31 omero.server.nodedescriptors=
05:27:31 
05:27:31 #############################################
05:27:31 ## Darwin (OS X) specific defaults for templated configuration files only.
05:27:31 ## ``_xxx.yyy.darwin`` properties will override xxx.yyy properties in this
05:27:31 ## file.
05:27:31 ## Do not set these properties in ``omero config``, instead set the original
05:27:31 ## ``xxx.yyy`` property
05:27:31 #############################################
05:27:31 _omero.glacier2.IceSSL.Ciphers.darwin=(AES)
05:27:31 
05:27:31 
05:27:31 
05:27:31 #############################################
05:27:31 ## Server product name for release artifacts
05:27:31 #############################################
05:27:31 product.name=OMERO.server
05:27:31 
05:27:31 #############################################
05:27:31 ### Properties below this marker are ignored by
05:27:31 ### omero.install.config_parser.PropertyParser
05:27:31 ### END
05:27:31 
05:27:31 #############################################
05:27:31 ## Library versions
05:27:31 #############################################
05:27:31 ##
05:27:31 versions.findbugs=1.2.1
05:27:31 versions.ice36=3.6.5
05:27:31 versions.ice36_lib=36
05:27:31 ## internal
05:27:31 versions.omeroshares36=3.6.3
05:27:31 versions.omeromock36=3.6.3
05:27:31 versions.icedb36=3.6.3
05:27:31 versions.ipython=1.2.1
05:27:31 
05:27:31 versions.janino=2.5.10
05:27:31 
05:27:31 versions.reportng=1.1.1
05:27:31 
05:27:31 versions.testng=7.5
05:27:31 versions.velocity=1.4
05:27:31 
05:27:31 versions.omero-pypi=https://pypi.io/packages/source/o/PACKAGE
05:27:31 versions.omero-scripts-url=${versions.omero-pypi}
05:27:31 
05:27:31 ###
05:27:31 ### Appended Values
05:27:31 ###
05:27:31 
05:27:31 ## Internal dependencies'
05:27:31 + echo '##
05:27:31 ## omero.properties
05:27:31 ## ----------------
05:27:31 ##
05:27:31 ## DO NOT EDIT!
05:27:31 ##
05:27:31 ##
05:27:31 ## Any of these properties can be altered by using `omero config`. MODIFYING
05:27:31 ## THIS FILE DOES NOT ALTER SERVER BEHAVIOR. It solely defines the defaults
05:27:31 ## at compile time!
05:27:31 ##
05:27:31 ## For an overview of these properties, see
05:27:31 ## https://docs.openmicroscopy.org/latest/omero/sysadmins/config.html
05:27:31 ##
05:27:31 ## Properties marked with "DEVELOPMENT" should not be used in production.
05:27:31 
05:27:31 # Comma separated list of Ice transports available to clients. The default
05:27:31 # value ("ssl,tcp") instructs Ice to open the ports specified by the
05:27:31 # omero.ports.ssl and omero.ports.tcp properties. Restricting to "ssl"
05:27:31 # will prevent all non-encrypted connections to the OMERO server.
05:27:31 #
05:27:31 # Additionally, there are two experimental values for using websockets:
05:27:31 # "ws" and "wss" for unencrypted and encrypted, respectively. The ports
05:27:31 # that are opened are controlled by the omero.ports.ws and omero.ports.wss
05:27:31 # properties. To enable all possible protocols use: "ssl,tcp,wss,ws".
05:27:31 #
05:27:31 # Note: When using websockets behind a web server like nginx, additional
05:27:31 # configuration may be needed.
05:27:31 omero.client.icetransports=ssl,tcp
05:27:31 
05:27:31 # The prefix to apply to all port numbers (SSL, TCP, registry) used by the
05:27:31 # server
05:27:31 omero.ports.prefix=
05:27:31 
05:27:31 # The Glacier2 SSL port number to use
05:27:31 omero.ports.ssl=4064
05:27:31 
05:27:31 # The Glacier2 TCP port number to use (unencrypted)
05:27:31 omero.ports.tcp=4063
05:27:31 
05:27:31 # The Glacier2 WSS port number to use
05:27:31 omero.ports.wss=4066
05:27:31 
05:27:31 # The Glacier2 WS port number to use (unencrypted)
05:27:31 omero.ports.ws=4065
05:27:31 
05:27:31 # The IceGrid registry port number to use
05:27:31 omero.ports.registry=4061
05:27:31 
05:27:31 #############################################
05:27:31 ## JVM configuration
05:27:31 ##
05:27:31 ## Note: changes to the omero.jvmcfg properties
05:27:31 ## will *not* be reflected in the compiled server
05:27:31 ## since they are defined in a Python file.
05:27:31 #############################################
05:27:31 ## (For documentation only)
05:27:31 # Memory strategy which will be used by default.
05:27:31 # Options include: percent, manual
05:27:31 omero.jvmcfg.strategy=percent
05:27:31 
05:27:31 ## (For documentation only)
05:27:31 # Explicit value for the `-Xmx` argument, e.g.
05:27:31 # "1g"
05:27:31 omero.jvmcfg.heap_size=
05:27:31 
05:27:31 ## (For documentation only)
05:27:31 # Explicit value for the MaxPermSize argument
05:27:31 # to the JVM, e.g. "500M". Ignored for Java8+
05:27:31 omero.jvmcfg.perm_gen=
05:27:31 
05:27:31 ## (For documentation only)
05:27:31 # Toggles on or off heap dumps on OOMs. Default is "off".
05:27:31 # The special value "tmp" will create the heap dumps in
05:27:31 # your temp directory.
05:27:31 omero.jvmcfg.heap_dump=
05:27:31 
05:27:31 ## (For documentation only)
05:27:31 # Used only by the percent strategy. An integer between 0
05:27:31 # and 100 which is the percent of active memory that will
05:27:31 # be used by the service.
05:27:31 omero.jvmcfg.percent=
05:27:31 
05:27:31 ## (For documentation only)
05:27:31 # Contains other parameters which should be passed to the
05:27:31 # JVM. The value of "append" is treated as if it were on
05:27:31 # the command line so will be separated on whitespace.
05:27:31 # For example, '\''-XX:-PrintGC -XX:+UseCompressedOops'\'' would
05:27:31 # results in two new arguments.
05:27:31 # Note that when using `config set` from the command line
05:27:31 # one may need to give a prior `--` option to prevent a value
05:27:31 # starting with `-` from already being parsed as an option,
05:27:31 # and values may need quoting to prevent whitespace or other
05:27:31 # significant characters from being interpreted prematurely.
05:27:31 
05:27:31 omero.jvmcfg.append=
05:27:31 
05:27:31 ## (For documentation only)
05:27:31 # Manual override of the total system memory that
05:27:31 # OMERO will *think* is present on the local OS (MB).
05:27:31 # If unset, an attempt will be made to detect the actual
05:27:31 # amount: first by using the Python library `psutil` and
05:27:31 # if that is not installed, by running a Java tool. If
05:27:31 # neither works, 4.0GB is assumed.
05:27:31 omero.jvmcfg.system_memory=
05:27:31 
05:27:31 ## (For documentation only)
05:27:31 # Suggestion for strategies as to the minimum memory
05:27:31 # that they will use for calculating JVM settings (MB).
05:27:31 omero.jvmcfg.min_system_memory=3414
05:27:31 
05:27:31 ## (For documentation only)
05:27:31 # Suggestion for strategies as to the maximum memory
05:27:31 # that they will use for calculating JVM settings (MB).
05:27:31 omero.jvmcfg.max_system_memory=48000
05:27:31 
05:27:31 
05:27:31 #############################################
05:27:31 ## Ice overrides
05:27:31 ##
05:27:31 ## Though not used directly by OMERO, a number
05:27:31 ## of properties prefixed with "Ice.*" will
05:27:31 ## alter the behavior of the OMERO runtime
05:27:31 ## by configuring the Ice communicators. For a
05:27:31 ## full listing see:
05:27:31 ##
05:27:31 ##   http://doc.zeroc.com/display/Ice/Property+Reference
05:27:31 ## For more information see
05:27:31 ## https://docs.openmicroscopy.org/latest/omero/sysadmins/troubleshooting.html#server-fails-to-start
05:27:31 #############################################
05:27:31 
05:27:31 # Disable IPv6 by setting to 0. Only needed in
05:27:31 # certain situations.
05:27:31 Ice.IPv6=1
05:27:31 
05:27:31 # Glacier2Template IceSSL defaults and overrides,
05:27:31 # see https://doc.zeroc.com/ice/3.6/property-reference/icessl.
05:27:31 # Any property beginning ``omero.glacier2.IceSSL.`` will be used to
05:27:31 # update the corresponding IceSSL. property.
05:27:31 omero.glacier2.IceSSL=
05:27:31 
05:27:31 # Glacier2Template SSL maximum allowed protocol (mac bug)
05:27:31 omero.glacier2.IceSSL.ProtocolVersionMax=tls1_1
05:27:31 # Glacier2Template SSL allowed cipher suites
05:27:31 omero.glacier2.IceSSL.Ciphers=ADH:!LOW:!MD5:!EXP:!3DES:@STRENGTH
05:27:31 # Glacier2Template SSL verification requirements
05:27:31 omero.glacier2.IceSSL.VerifyPeer=0
05:27:31 # Glacier2Template SSL allowed protocols
05:27:31 omero.glacier2.IceSSL.Protocols=tls1
05:27:31 
05:27:31 # Override the default set of OMERO services.
05:27:31 # For example, to run OMERO.server with Blitz and Tables only
05:27:31 # (i.e. disable Processor, DropBox, Indexer, PixelData)
05:27:31 # set this to ``master:Blitz-0,Tables-0``.
05:27:31 # Also use this to distribute OMERO services across multiple nodes,
05:27:31 # for example:
05:27:31 # ``master:Blitz-0,Tables-0 worker1:Processor-0``.
05:27:31 # See
05:27:31 # https://docs.openmicroscopy.org/omero/latest/sysadmins/grid.html#deployment-examples
05:27:31 omero.server.nodedescriptors=
05:27:31 
05:27:31 #############################################
05:27:31 ## Darwin (OS X) specific defaults for templated configuration files only.
05:27:31 ## ``_xxx.yyy.darwin`` properties will override xxx.yyy properties in this
05:27:31 ## file.
05:27:31 ## Do not set these properties in ``omero config``, instead set the original
05:27:31 ## ``xxx.yyy`` property
05:27:31 #############################################
05:27:31 _omero.glacier2.IceSSL.Ciphers.darwin=(AES)
05:27:31 
05:27:31 
05:27:31 
05:27:31 #############################################
05:27:31 ## Server product name for release artifacts
05:27:31 #############################################
05:27:31 product.name=OMERO.server
05:27:31 
05:27:31 #############################################
05:27:31 ### Properties below this marker are ignored by
05:27:31 ### omero.install.config_parser.PropertyParser
05:27:31 ### END
05:27:31 
05:27:31 #############################################
05:27:31 ## Library versions
05:27:31 #############################################
05:27:31 ##
05:27:31 versions.findbugs=1.2.1
05:27:31 versions.ice36=3.6.5
05:27:31 versions.ice36_lib=36
05:27:31 ## internal
05:27:31 versions.omeroshares36=3.6.3
05:27:31 versions.omeromock36=3.6.3
05:27:31 versions.icedb36=3.6.3
05:27:31 versions.ipython=1.2.1
05:27:31 
05:27:31 versions.janino=2.5.10
05:27:31 
05:27:31 versions.reportng=1.1.1
05:27:31 
05:27:31 versions.testng=7.5
05:27:31 versions.velocity=1.4
05:27:31 
05:27:31 versions.omero-pypi=https://pypi.io/packages/source/o/PACKAGE
05:27:31 versions.omero-scripts-url=${versions.omero-pypi}
05:27:31 
05:27:31 ###
05:27:31 ### Appended Values
05:27:31 ###
05:27:31 
05:27:31 ## Internal dependencies'
05:27:31 + echo versions.omero-pypi=https://merge-ci.openmicroscopy.org/jenkins//job/OMERO-python-superbuild-build/lastSuccessfulBuild/artifact/PACKAGE/dist/
05:27:31 + echo versions.omero-github=https://github.com/snoopycrimecop/PACKAGE/archive
05:27:31 + echo versions.scripts-prefix=
05:27:31 + echo versions.scripts=merge_ci
05:27:31 + cat /home/omero/workspace/OMERO-push/version.properties
05:27:31 + git commit -a -m 'Add version.properties to etc/omero.properties'
05:27:31 [detached HEAD f824c5f0bb] Add version.properties to etc/omero.properties
05:27:31  1 file changed, 47 insertions(+), 7 deletions(-)
05:27:31 + git push -f git@github.com:snoopycrimecop/openmicroscopy.git HEAD:refs/heads/merge_ci
05:27:33 To github.com:snoopycrimecop/openmicroscopy.git
05:27:33  + b35a114fd0...f824c5f0bb HEAD -> merge_ci (forced update)
05:27:33 Finished: SUCCESS