![[Jenkins]](/jenkins/static/28c89a1b/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 1 originally caused by: Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified Cloning the remote Git repository Cloning with configured refspecs honoured and without tags Cloning repository https://github.com/ome/jenkins-library-recursivemerge.git > git init /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748 # timeout=10 Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" First time build. Skipping changelog. [Pipeline] checkout The recommended git tool is: NONE No credentials specified Cloning the remote Git repository Avoid second fetch Checking out Revision 2c91b66fcaaca19a4efe830d3c0aa0e23e00537a (refs/remotes/origin/master) Commit message: "Merge pull request #268 from ome/dependabot/submodules/omero-scripts-2078ac7" First time build. Skipping changelog. Cleaning workspace Cloning repository https://github.com/ome/omero-python-superbuild.git > git init /home/omero/workspace/OMERO-python-superbuild-push # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 2c91b66fcaaca19a4efe830d3c0aa0e23e00537a # timeout=10 > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 1 [Pipeline] sh > git submodule update --init --recursive omero-scripts # timeout=10 + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.0-py3-none-any.whl (2.1 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.0 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.2.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.31.0-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.10.0-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.5-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.6-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.2.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.21-py2.py3-none-any.whl.metadata (1.1 kB) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.2.0-py3-none-any.whl (350 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.31.0-py3-none-any.whl (62 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.10.0-py3-none-any.whl (33 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.2.2-py3-none-any.whl (163 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.5-cp39-abi3-manylinux_2_28_x86_64.whl (4.6 MB) Using cached idna-3.6-py3-none-any.whl (61 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.21-py2.py3-none-any.whl (118 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.2.0 PyYAML-6.0.1 certifi-2024.2.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.5 future-1.0.0 idna-3.6 pycparser-2.21 pyjwt-2.8.0 pynacl-1.5.0 requests-2.31.0 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.10.0 urllib3-1.26.18 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-03-14 16:13:07,073 [ scc.config] DEBUG Found github.token 2024-03-14 16:13:07,076 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-03-14 16:13:07,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:13:07,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:13:08,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-03-14 16:13:08,142 [ scc.gh] DEBUG 4623 remaining from 5000 (Reset at 16:03 2024-03-14 16:13:08,143 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-14 16:13:08,148 [ scc.git] DEBUG Check current status 2024-03-14 16:13:08,148 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-14 16:13:08,153 [ scc.git] DEBUG 2c91b66 Merge pull request #268 from ome/dependabot/submodules/omero-scripts-2078ac7 2024-03-14 16:13:08,154 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-14 16:13:08,192 [ scc.git] DEBUG 586335057cf72cce7df48fd2b99f124a26100deb omero-dropbox (v5.6.0-54-g5863350) 2024-03-14 16:13:08,195 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-03-14 16:13:08,198 [ scc.git] DEBUG 0dc60bd67a5f9281e2063a0a3aeeaa119c14447d omero-py (v5.19.0-1-g0dc60bd6) 2024-03-14 16:13:08,201 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d omero-scripts (v5.8.0-1-g2078ac7) 2024-03-14 16:13:08,204 [ scc.git] DEBUG 99aebd2a6bc892db0ac38f791821f17886a59095 omero-web (v5.24.0-41-g99aebd2a6) 2024-03-14 16:13:08,208 [ scc.config] DEBUG Found remote.origin.url 2024-03-14 16:13:08,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-03-14 16:13:09,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-14 16:13:09,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-14 16:13:09,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-14 16:13:10,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-14 16:13:10,382 [ scc.git] DEBUG Resetting... 2024-03-14 16:13:10,382 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-03-14 16:13:10,388 [ scc.git] DEBUG HEAD is now at 2c91b66 Merge pull request #268 from ome/dependabot/submodules/omero-scripts-2078ac7 2024-03-14 16:13:10,388 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-03-14 16:13:10,439 [ scc.git] DEBUG Check current status 2024-03-14 16:13:10,439 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-14 16:13:10,443 [ scc.git] DEBUG 2c91b66 Merge pull request #268 from ome/dependabot/submodules/omero-scripts-2078ac7 2024-03-14 16:13:10,444 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-14 16:13:10,484 [ scc.git] DEBUG 586335057cf72cce7df48fd2b99f124a26100deb omero-dropbox (v5.6.0-54-g5863350) 2024-03-14 16:13:10,486 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-03-14 16:13:10,489 [ scc.git] DEBUG 0dc60bd67a5f9281e2063a0a3aeeaa119c14447d omero-py (v5.19.0-1-g0dc60bd6) 2024-03-14 16:13:10,493 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d omero-scripts (v5.8.0-1-g2078ac7) 2024-03-14 16:13:10,496 [ scc.git] DEBUG 99aebd2a6bc892db0ac38f791821f17886a59095 omero-web (v5.24.0-41-g99aebd2a6) 2024-03-14 16:13:10,497 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-03-14 16:13:10,497 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-03-14 16:13:10,497 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-03-14 16:13:10,497 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-03-14 16:13:10,498 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-03-14 16:13:10,498 [ scc.repo] DEBUG ## PRs found: 2024-03-14 16:13:10,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2024-03-14 16:13:10,867 [ scc.repo] DEBUG ## Branches found: 2024-03-14 16:13:10,867 [ scc.git] DEBUG Get sha1 of %s 2024-03-14 16:13:10,868 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:13:10,872 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-14 16:13:10,875 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-14 16:13:10,876 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-14 16:13:10,880 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-14 16:13:10,885 [ scc.git] DEBUG Already up to date. 2024-03-14 16:13:10,885 [ scc.git] DEBUG ## Unique users: [] 2024-03-14 16:13:10,885 [ scc.git] DEBUG Get sha1 of %s 2024-03-14 16:13:10,885 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:13:10,889 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-14 16:13:10,934 [ scc.git] DEBUG Get sha1 of %s 2024-03-14 16:13:10,934 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:13:10,938 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-14 16:13:10,998 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f534a7d71f0> has no local changes 2024-03-14 16:13:10,998 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/1/)' 2024-03-14 16:13:11,023 [ scc.git] DEBUG [detached HEAD e338fd9] merge master -Dorg -Snone 2024-03-14 16:13:11,023 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-03-14 16:13:11,023 [ scc.merge] INFO Already up to date. 2024-03-14 16:13:11,023 [ scc.merge] INFO 2024-03-14 16:13:11,023 [ scc.merge] INFO 2024-03-14 16:13:11,023 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-03-14 16:13:11,023 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Submodule path 'omero-web': checked out 'eec0fd18a86f1105325281178112dcb7c7b48fea' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-03-14 16:13:13,516 [ scc.config] DEBUG Found github.token 2024-03-14 16:13:13,519 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-03-14 16:13:13,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:13:14,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:13:14,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-03-14 16:13:14,586 [ scc.gh] DEBUG 4615 remaining from 5000 (Reset at 16:03 2024-03-14 16:13:14,587 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-14 16:13:14,591 [ scc.git] DEBUG Check current status 2024-03-14 16:13:14,591 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-14 16:13:14,595 [ scc.git] DEBUG e338fd9 merge master -Dorg -Snone 2024-03-14 16:13:14,595 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-14 16:13:14,635 [ scc.git] DEBUG 586335057cf72cce7df48fd2b99f124a26100deb omero-dropbox (v5.6.0-54-g5863350) 2024-03-14 16:13:14,638 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-03-14 16:13:14,641 [ scc.git] DEBUG 0dc60bd67a5f9281e2063a0a3aeeaa119c14447d omero-py (v5.19.0-1-g0dc60bd6) 2024-03-14 16:13:14,645 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d omero-scripts (v5.8.0-1-g2078ac7) 2024-03-14 16:13:14,647 [ scc.git] DEBUG +eec0fd18a86f1105325281178112dcb7c7b48fea omero-web (v5.25.0-1-geec0fd18a) 2024-03-14 16:13:14,652 [ scc.config] DEBUG Found remote.origin.url 2024-03-14 16:13:14,652 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-03-14 16:13:14,654 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-03-14 16:13:15,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-03-14 16:13:15,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-14 16:13:15,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-14 16:13:16,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-14 16:13:16,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-14 16:13:16,764 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-14 16:13:16,810 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-03-14 16:13:16,810 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-14 16:13:16,813 [ scc.git] DEBUG Check current status 2024-03-14 16:13:16,814 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-14 16:13:16,817 [ scc.git] DEBUG 5863350 Merge pull request #22 from sbesson/python311 2024-03-14 16:13:16,817 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-14 16:13:16,853 [ scc.config] DEBUG Found remote.origin.url 2024-03-14 16:13:17,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2024-03-14 16:13:17,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-14 16:13:18,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-14 16:13:18,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-14 16:13:18,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-14 16:13:18,948 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-14 16:13:18,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-14 16:13:18,990 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-03-14 16:13:18,991 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-14 16:13:18,995 [ scc.git] DEBUG Check current status 2024-03-14 16:13:18,995 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-14 16:13:18,998 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312 2024-03-14 16:13:18,999 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-14 16:13:19,041 [ scc.config] DEBUG Found remote.origin.url 2024-03-14 16:13:19,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2024-03-14 16:13:19,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-14 16:13:20,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-14 16:13:20,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-14 16:13:21,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-14 16:13:21,165 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-14 16:13:21,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-14 16:13:21,208 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-03-14 16:13:21,208 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-14 16:13:21,212 [ scc.git] DEBUG Check current status 2024-03-14 16:13:21,212 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-14 16:13:21,215 [ scc.git] DEBUG 0dc60bd6 Bump version: 5.19.0 → 5.19.1.dev0 2024-03-14 16:13:21,216 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-14 16:13:21,252 [ scc.config] DEBUG Found remote.origin.url 2024-03-14 16:13:21,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2024-03-14 16:13:22,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-14 16:13:22,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-14 16:13:22,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-14 16:13:23,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-14 16:13:23,361 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-14 16:13:23,400 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-14 16:13:23,401 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-03-14 16:13:23,401 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-14 16:13:23,404 [ scc.git] DEBUG Check current status 2024-03-14 16:13:23,404 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-14 16:13:23,408 [ scc.git] DEBUG 2078ac7 Bump version: 5.8.0 → 5.8.1.dev0 2024-03-14 16:13:23,408 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-14 16:13:23,446 [ scc.config] DEBUG Found remote.origin.url 2024-03-14 16:13:23,447 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-03-14 16:13:23,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2024-03-14 16:13:24,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-14 16:13:24,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-14 16:13:25,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-14 16:13:25,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-14 16:13:25,588 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-14 16:13:25,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-14 16:13:25,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-03-14 16:13:25,628 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-14 16:13:25,632 [ scc.git] DEBUG Check current status 2024-03-14 16:13:25,632 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-14 16:13:25,636 [ scc.git] DEBUG eec0fd18a Bump version: 5.25.0 → 5.25.1.dev0 2024-03-14 16:13:25,636 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-14 16:13:25,680 [ scc.config] DEBUG Found remote.origin.url 2024-03-14 16:13:26,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2024-03-14 16:13:26,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-14 16:13:27,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-14 16:13:27,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-14 16:13:27,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-14 16:13:27,918 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-14 16:13:27,954 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-14 16:13:27,954 [ scc.git] DEBUG Resetting... 2024-03-14 16:13:27,954 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-03-14 16:13:27,960 [ scc.git] DEBUG HEAD is now at e338fd9 merge master -Dorg -Snone 2024-03-14 16:13:27,960 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-03-14 16:13:28,019 [ scc.git] DEBUG Submodule path 'omero-web': checked out '99aebd2a6bc892db0ac38f791821f17886a59095' 2024-03-14 16:13:28,022 [ scc.git] DEBUG Check current status 2024-03-14 16:13:28,022 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-14 16:13:28,026 [ scc.git] DEBUG e338fd9 merge master -Dorg -Snone 2024-03-14 16:13:28,026 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-14 16:13:28,061 [ scc.git] DEBUG 586335057cf72cce7df48fd2b99f124a26100deb omero-dropbox (v5.6.0-54-g5863350) 2024-03-14 16:13:28,064 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-03-14 16:13:28,066 [ scc.git] DEBUG 0dc60bd67a5f9281e2063a0a3aeeaa119c14447d omero-py (v5.19.0-1-g0dc60bd6) 2024-03-14 16:13:28,070 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d omero-scripts (v5.8.0-1-g2078ac7) 2024-03-14 16:13:28,072 [ scc.git] DEBUG 99aebd2a6bc892db0ac38f791821f17886a59095 omero-web (v5.24.0-41-g99aebd2a6) 2024-03-14 16:13:28,073 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-03-14 16:13:28,073 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-03-14 16:13:28,073 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-03-14 16:13:28,073 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-03-14 16:13:28,074 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-03-14 16:13:28,074 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-03-14 16:13:28,074 [ scc.repo] DEBUG ## PRs found: 2024-03-14 16:13:28,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2024-03-14 16:13:28,350 [ scc.repo] DEBUG ## Branches found: 2024-03-14 16:13:28,350 [ scc.git] DEBUG Get sha1 of %s 2024-03-14 16:13:28,350 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:13:28,354 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-14 16:13:28,358 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-14 16:13:28,359 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-14 16:13:28,363 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-14 16:13:28,367 [ scc.git] DEBUG Already up to date. 2024-03-14 16:13:28,367 [ scc.git] DEBUG ## Unique users: [] 2024-03-14 16:13:28,367 [ scc.git] DEBUG Get sha1 of %s 2024-03-14 16:13:28,367 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:13:28,370 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-14 16:13:28,413 [ scc.git] DEBUG Get sha1 of %s 2024-03-14 16:13:28,413 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:13:28,418 [ scc.repo] DEBUG ## PRs found: 2024-03-14 16:13:28,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2024-03-14 16:13:29,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/23 HTTP/1.1" 200 None 2024-03-14 16:13:29,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/23/comments HTTP/1.1" 200 None 2024-03-14 16:13:30,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/c388b0d9ede0607a3d83da9b59fb52134d361e5c HTTP/1.1" 200 None 2024-03-14 16:13:30,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/c388b0d9ede0607a3d83da9b59fb52134d361e5c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-14 16:13:31,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/c388b0d9ede0607a3d83da9b59fb52134d361e5c/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-14 16:13:31,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/c388b0d9ede0607a3d83da9b59fb52134d361e5c HTTP/1.1" 200 None 2024-03-14 16:13:32,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/c388b0d9ede0607a3d83da9b59fb52134d361e5c?per_page=1 HTTP/1.1" 200 2 2024-03-14 16:13:32,344 [ scc.repo] DEBUG - PR 23 sbesson 'Remove python-future compatibility code' 2024-03-14 16:13:32,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2024-03-14 16:13:33,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2024-03-14 16:13:33,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-03-14 16:13:34,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-14 16:13:34,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-03-14 16:13:35,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2024-03-14 16:13:35,260 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-03-14 16:13:35,260 [ scc.repo] DEBUG ## Branches found: 2024-03-14 16:13:35,260 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-03-14 16:13:35,260 [ scc.git] DEBUG Get sha1 of %s 2024-03-14 16:13:35,260 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:13:35,264 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-14 16:13:35,268 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-14 16:13:35,269 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-14 16:13:35,273 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-14 16:13:35,278 [ scc.git] DEBUG Already up to date. 2024-03-14 16:13:35,278 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2024-03-14 16:13:36,029 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2024-03-14 16:13:36,029 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2024-03-14 16:13:36,031 [ scc.git] DEBUG Calling 'git fetch origin pull/23/head' 2024-03-14 16:13:36,622 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2024-03-14 16:13:36,622 [ scc.git] DEBUG * branch refs/pull/23/head -> FETCH_HEAD 2024-03-14 16:13:36,624 [ scc.git] DEBUG ## Unique users: [] 2024-03-14 16:13:36,624 [ scc.git] DEBUG Get sha1 of %s 2024-03-14 16:13:36,625 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:13:36,629 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-03-14 16:13:36,634 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:13:36,638 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-03-14 16:13:36,649 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-14 16:13:36,652 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2024-03-14 16:13:36,653 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2024-03-14 16:13:36,653 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2024-03-14 16:13:36,653 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2024-03-14 16:13:36,653 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2024-03-14 16:13:36,653 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2024-03-14 16:13:36,653 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2024-03-14 16:13:36,653 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2024-03-14 16:13:36,654 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2024-03-14 16:13:36,654 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2024-03-14 16:13:36,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:13:36,818 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c388b0d9ede0607a3d83da9b59fb52134d361e5c' 2024-03-14 16:13:36,825 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:13:36,830 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 23 (Remove python-future compatibility code) c388b0d9ede0607a3d83da9b59fb52134d361e5c' 2024-03-14 16:13:36,851 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2024-03-14 16:13:36,852 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2024-03-14 16:13:36,852 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2024-03-14 16:13:36,852 [ scc.git] DEBUG Auto-merging src/fsLists.py 2024-03-14 16:13:36,852 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2024-03-14 16:13:36,852 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2024-03-14 16:13:36,852 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2024-03-14 16:13:36,852 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2024-03-14 16:13:36,852 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2024-03-14 16:13:36,852 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-14 16:13:36,858 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-03-14 16:13:36,858 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 4 +-- 2024-03-14 16:13:36,858 [ scc.git] DEBUG .github/workflows/tox.yml | 5 ++-- 2024-03-14 16:13:36,858 [ scc.git] DEBUG Dockerfile | 32 ---------------------- 2024-03-14 16:13:36,858 [ scc.git] DEBUG setup.py | 2 +- 2024-03-14 16:13:36,858 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 1 - 2024-03-14 16:13:36,858 [ scc.git] DEBUG src/fsDirectory.py | 8 +----- 2024-03-14 16:13:36,858 [ scc.git] DEBUG src/fsDropBox.py | 8 +----- 2024-03-14 16:13:36,858 [ scc.git] DEBUG src/fsDropBoxMonitorClient.py | 11 +------- 2024-03-14 16:13:36,859 [ scc.git] DEBUG src/fsFileServer.py | 12 ++------- 2024-03-14 16:13:36,859 [ scc.git] DEBUG src/fsLists.py | 2 -- 2024-03-14 16:13:36,859 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 9 +------ 2024-03-14 16:13:36,859 [ scc.git] DEBUG src/fsMonitor.py | 2 -- 2024-03-14 16:13:36,859 [ scc.git] DEBUG src/fsMonitorServer.py | 8 +++--- 2024-03-14 16:13:36,859 [ scc.git] DEBUG src/fsNotificationScheduler.py | 3 --- 2024-03-14 16:13:36,859 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 21 +++++---------- 2024-03-14 16:13:36,859 [ scc.git] DEBUG src/fsUtil.py | 9 +++---- 2024-03-14 16:13:36,859 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 8 +----- 2024-03-14 16:13:36,859 [ scc.git] DEBUG test/conftest.py | 2 -- 2024-03-14 16:13:36,859 [ scc.git] DEBUG test/drivers.py | 17 +++--------- 2024-03-14 16:13:36,859 [ scc.git] DEBUG test/unit/test_drivers.py | 55 ++++++++++++++++---------------------- 2024-03-14 16:13:36,859 [ scc.git] DEBUG test/unit/test_monitor.py | 2 -- 2024-03-14 16:13:36,859 [ scc.git] DEBUG test/unit/test_replay.py | 8 +----- 2024-03-14 16:13:36,859 [ scc.git] DEBUG test/unit/test_state.py | 1 - 2024-03-14 16:13:36,859 [ scc.git] DEBUG tox.ini | 3 ++- 2024-03-14 16:13:36,859 [ scc.git] DEBUG 25 files changed, 57 insertions(+), 178 deletions(-) 2024-03-14 16:13:36,859 [ scc.git] DEBUG delete mode 100644 Dockerfile 2024-03-14 16:13:37,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:13:37,223 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-14 16:13:37,263 [ scc.git] DEBUG Get sha1 of %s 2024-03-14 16:13:37,264 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:13:37,268 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-14 16:13:37,309 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-14 16:13:37,315 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdb6d6e91f0> has no local changes 2024-03-14 16:13:37,315 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' - PR 23 sbesson 'Remove python-future compatibility code' Generated by OMERO-python-superbuild-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/1/)' 2024-03-14 16:13:37,321 [ scc.git] DEBUG [detached HEAD fb1177b] merge master -Dorg -Ssuccess-only 2024-03-14 16:13:37,321 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-14 16:13:37,322 [ scc.repo] DEBUG ## PRs found: 2024-03-14 16:13:37,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2024-03-14 16:13:38,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2024-03-14 16:13:38,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2024-03-14 16:13:39,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-03-14 16:13:39,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-14 16:13:40,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-14 16:13:40,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-03-14 16:13:41,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2024-03-14 16:13:41,264 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2024-03-14 16:13:41,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2024-03-14 16:13:42,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2024-03-14 16:13:42,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2024-03-14 16:13:43,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2024-03-14 16:13:43,243 [ scc.repo] DEBUG ## Branches found: 2024-03-14 16:13:43,243 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-03-14 16:13:43,243 [ scc.git] DEBUG Get sha1 of %s 2024-03-14 16:13:43,243 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:13:43,248 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-14 16:13:43,252 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-14 16:13:43,252 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-14 16:13:43,256 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-14 16:13:43,260 [ scc.git] DEBUG Already up to date. 2024-03-14 16:13:43,260 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2024-03-14 16:13:43,879 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2024-03-14 16:13:43,879 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2024-03-14 16:13:43,881 [ scc.git] DEBUG ## Unique users: [] 2024-03-14 16:13:43,882 [ scc.git] DEBUG Get sha1 of %s 2024-03-14 16:13:43,882 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:13:43,886 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-03-14 16:13:43,892 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:13:43,896 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-03-14 16:13:43,908 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2024-03-14 16:13:43,909 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-14 16:13:43,912 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2024-03-14 16:13:43,912 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2024-03-14 16:13:43,912 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2024-03-14 16:13:44,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:13:44,070 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-14 16:13:44,109 [ scc.git] DEBUG Get sha1 of %s 2024-03-14 16:13:44,110 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:13:44,115 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-14 16:13:44,151 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-14 16:13:44,157 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdb6fab6ee0> has no local changes 2024-03-14 16:13:44,157 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/1/)' 2024-03-14 16:13:44,164 [ scc.git] DEBUG [detached HEAD b02a0b5] merge master -Dorg -Ssuccess-only 2024-03-14 16:13:44,164 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-14 16:13:44,165 [ scc.repo] DEBUG ## PRs found: 2024-03-14 16:13:44,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2024-03-14 16:13:45,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/400 HTTP/1.1" 200 None 2024-03-14 16:13:45,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/400/comments HTTP/1.1" 200 None 2024-03-14 16:13:45,811 [ scc.repo] DEBUG # ... Exclude label: exclude 2024-03-14 16:13:46,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/398 HTTP/1.1" 200 None 2024-03-14 16:13:46,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/9013e726380603c0f058e164320548872a8cd7d2 HTTP/1.1" 200 None 2024-03-14 16:13:47,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/9013e726380603c0f058e164320548872a8cd7d2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-14 16:13:47,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/9013e726380603c0f058e164320548872a8cd7d2/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-14 16:13:48,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/9013e726380603c0f058e164320548872a8cd7d2 HTTP/1.1" 200 None 2024-03-14 16:13:48,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/9013e726380603c0f058e164320548872a8cd7d2?per_page=1 HTTP/1.1" 200 None 2024-03-14 16:13:49,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/9013e726380603c0f058e164320548872a8cd7d2 HTTP/1.1" 200 None 2024-03-14 16:13:49,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/9013e726380603c0f058e164320548872a8cd7d2/status HTTP/1.1" 200 None 2024-03-14 16:13:49,833 [ scc.repo] DEBUG - PR 398 will-moore 'getGridSize() handles plates with no Wells' 2024-03-14 16:13:50,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2024-03-14 16:13:50,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2024-03-14 16:13:51,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2024-03-14 16:13:51,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-14 16:13:52,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-14 16:13:52,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/394 HTTP/1.1" 200 None 2024-03-14 16:13:53,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/394/comments HTTP/1.1" 200 None 2024-03-14 16:13:53,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2024-03-14 16:13:54,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-03-14 16:13:54,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-14 16:13:55,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-14 16:13:55,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-03-14 16:13:55,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None 2024-03-14 16:13:56,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-03-14 16:13:56,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None 2024-03-14 16:13:56,844 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2024-03-14 16:13:57,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None 2024-03-14 16:13:57,304 [ scc.repo] DEBUG # ... Exclude label: exclude 2024-03-14 16:13:57,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378 HTTP/1.1" 200 None 2024-03-14 16:13:58,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378/comments HTTP/1.1" 200 None 2024-03-14 16:13:58,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None 2024-03-14 16:13:59,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None 2024-03-14 16:13:59,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-03-14 16:14:00,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-14 16:14:00,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-03-14 16:14:01,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2 2024-03-14 16:14:01,125 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-03-14 16:14:01,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2024-03-14 16:14:02,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2024-03-14 16:14:02,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-03-14 16:14:03,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-14 16:14:03,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-14 16:14:04,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-03-14 16:14:04,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None 2024-03-14 16:14:04,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-03-14 16:14:05,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None 2024-03-14 16:14:05,403 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2024-03-14 16:14:05,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None 2024-03-14 16:14:06,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None 2024-03-14 16:14:06,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2024-03-14 16:14:07,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2024-03-14 16:14:07,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-03-14 16:14:08,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-14 16:14:08,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-03-14 16:14:09,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2 2024-03-14 16:14:09,148 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj' 2024-03-14 16:14:09,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None 2024-03-14 16:14:10,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-03-14 16:14:10,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-14 16:14:11,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-03-14 16:14:11,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2 2024-03-14 16:14:11,465 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-03-14 16:14:12,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None 2024-03-14 16:14:12,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None 2024-03-14 16:14:13,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-03-14 16:14:13,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-14 16:14:13,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-03-14 16:14:14,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2 2024-03-14 16:14:14,339 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error' 2024-03-14 16:14:14,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2024-03-14 16:14:15,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2024-03-14 16:14:15,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-03-14 16:14:16,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-14 16:14:16,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-03-14 16:14:17,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2024-03-14 16:14:17,193 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2024-03-14 16:14:17,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None 2024-03-14 16:14:18,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None 2024-03-14 16:14:18,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None 2024-03-14 16:14:19,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None 2024-03-14 16:14:19,191 [ scc.repo] DEBUG ## Branches found: 2024-03-14 16:14:19,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-03-14 16:14:19,192 [ scc.git] DEBUG Get sha1 of %s 2024-03-14 16:14:19,192 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:14:19,199 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-14 16:14:19,203 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-14 16:14:19,203 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-14 16:14:19,208 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-14 16:14:19,213 [ scc.git] DEBUG Already up to date. 2024-03-14 16:14:19,213 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2024-03-14 16:14:20,017 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-03-14 16:14:20,018 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2024-03-14 16:14:20,020 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head' 2024-03-14 16:14:20,792 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-03-14 16:14:20,792 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD 2024-03-14 16:14:20,795 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head' 2024-03-14 16:14:21,549 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-03-14 16:14:21,549 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD 2024-03-14 16:14:21,551 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head' 2024-03-14 16:14:22,273 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-03-14 16:14:22,273 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD 2024-03-14 16:14:22,276 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2024-03-14 16:14:22,885 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-03-14 16:14:22,885 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2024-03-14 16:14:22,887 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head' 2024-03-14 16:14:23,451 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-03-14 16:14:23,451 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD 2024-03-14 16:14:23,453 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2024-03-14 16:14:24,028 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-03-14 16:14:24,029 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2024-03-14 16:14:24,032 [ scc.git] DEBUG Calling 'git fetch origin pull/398/head' 2024-03-14 16:14:24,658 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-03-14 16:14:24,658 [ scc.git] DEBUG * branch refs/pull/398/head -> FETCH_HEAD 2024-03-14 16:14:24,660 [ scc.git] DEBUG ## Unique users: [] 2024-03-14 16:14:24,660 [ scc.git] DEBUG Get sha1 of %s 2024-03-14 16:14:24,660 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:14:24,664 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-03-14 16:14:24,674 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:14:24,678 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-03-14 16:14:24,700 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2024-03-14 16:14:24,700 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2024-03-14 16:14:24,701 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-14 16:14:24,704 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2024-03-14 16:14:24,704 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2024-03-14 16:14:24,704 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2024-03-14 16:14:24,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:14:24,972 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-03-14 16:14:24,982 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:14:24,988 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-03-14 16:14:25,027 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-03-14 16:14:25,027 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py 2024-03-14 16:14:25,028 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-14 16:14:25,034 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------ 2024-03-14 16:14:25,034 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++ 2024-03-14 16:14:25,034 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-) 2024-03-14 16:14:25,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:14:25,376 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-03-14 16:14:25,387 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:14:25,391 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-03-14 16:14:25,412 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py 2024-03-14 16:14:25,413 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-14 16:14:25,416 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++---- 2024-03-14 16:14:25,416 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-) 2024-03-14 16:14:25,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:14:25,780 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a' 2024-03-14 16:14:25,792 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:14:25,797 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a' 2024-03-14 16:14:25,819 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py 2024-03-14 16:14:25,820 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py 2024-03-14 16:14:25,821 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-14 16:14:25,824 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++- 2024-03-14 16:14:25,824 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +- 2024-03-14 16:14:25,824 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-) 2024-03-14 16:14:26,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:14:26,206 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-03-14 16:14:26,216 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:14:26,219 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-03-14 16:14:26,236 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-14 16:14:26,238 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2024-03-14 16:14:26,238 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2024-03-14 16:14:26,238 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2024-03-14 16:14:26,238 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2024-03-14 16:14:26,238 [ scc.git] DEBUG create mode 100644 connect.py 2024-03-14 16:14:26,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:14:26,604 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-03-14 16:14:26,615 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:14:26,619 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-03-14 16:14:26,636 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py 2024-03-14 16:14:26,637 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-14 16:14:26,639 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++ 2024-03-14 16:14:26,639 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-03-14 16:14:27,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:14:27,007 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2024-03-14 16:14:27,018 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:14:27,022 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2024-03-14 16:14:27,043 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2024-03-14 16:14:27,044 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-14 16:14:27,047 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2024-03-14 16:14:27,048 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2024-03-14 16:14:27,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:14:27,420 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9013e726380603c0f058e164320548872a8cd7d2' 2024-03-14 16:14:27,430 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:14:27,435 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 398 (getGridSize() handles plates with no Wells) 9013e726380603c0f058e164320548872a8cd7d2' 2024-03-14 16:14:27,474 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-03-14 16:14:27,475 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-14 16:14:27,482 [ scc.git] DEBUG src/omero/gateway/__init__.py | 5 ++++- 2024-03-14 16:14:27,482 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 1 deletion(-) 2024-03-14 16:14:27,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:14:27,821 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-14 16:14:27,861 [ scc.git] DEBUG Get sha1 of %s 2024-03-14 16:14:27,861 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:14:27,865 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-14 16:14:27,906 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-14 16:14:27,915 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdb6c658f10> has no local changes 2024-03-14 16:14:27,916 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 400 jburel 'Session ID and constructor' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 394 jo-mueller 'added `_repr_html_` method for `_ImageWrapper`' (user: jo-mueller) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 398 will-moore 'getGridSize() handles plates with no Wells' Generated by OMERO-python-superbuild-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/1/)' 2024-03-14 16:14:27,927 [ scc.git] DEBUG [detached HEAD f466382a] merge master -Dorg -Ssuccess-only 2024-03-14 16:14:27,927 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-14 16:14:27,928 [ scc.git] INFO Overriding base-branch from master to develop 2024-03-14 16:14:27,928 [ scc.repo] DEBUG ## PRs found: 2024-03-14 16:14:28,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-03-14 16:14:28,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-03-14 16:14:29,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-03-14 16:14:29,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-03-14 16:14:30,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-03-14 16:14:30,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-03-14 16:14:31,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-03-14 16:14:31,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-03-14 16:14:32,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-14 16:14:32,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-03-14 16:14:33,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-03-14 16:14:33,227 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-03-14 16:14:33,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-03-14 16:14:34,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-03-14 16:14:34,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-03-14 16:14:35,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-03-14 16:14:35,127 [ scc.repo] DEBUG ## Branches found: 2024-03-14 16:14:35,127 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-03-14 16:14:35,127 [ scc.git] DEBUG Get sha1 of %s 2024-03-14 16:14:35,127 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:14:35,133 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-03-14 16:14:35,138 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-14 16:14:35,138 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-03-14 16:14:35,144 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-03-14 16:14:35,150 [ scc.git] DEBUG Already up to date. 2024-03-14 16:14:35,150 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-03-14 16:14:35,741 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2024-03-14 16:14:35,742 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-03-14 16:14:35,744 [ scc.git] DEBUG ## Unique users: [] 2024-03-14 16:14:35,744 [ scc.git] DEBUG Get sha1 of %s 2024-03-14 16:14:35,744 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:14:35,749 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-03-14 16:14:35,756 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:14:35,761 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-03-14 16:14:35,772 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-03-14 16:14:35,773 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-03-14 16:14:35,773 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-03-14 16:14:35,773 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-03-14 16:14:35,778 [ scc.git] DEBUG Calling 'git reset --hard 2078ac72dbf11f2733e685000a274eff81c2ac2d' 2024-03-14 16:14:35,784 [ scc.git] DEBUG HEAD is now at 2078ac7 Bump version: 5.8.0 → 5.8.1.dev0 2024-03-14 16:14:35,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:14:35,937 [ scc.git] DEBUG Calling 'git merge-base 2078ac72dbf11f2733e685000a274eff81c2ac2d 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-03-14 16:14:35,943 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..2078ac72dbf11f2733e685000a274eff81c2ac2d' 2024-03-14 16:14:35,957 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#1](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/1/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/1/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-03-14 16:14:35,964 [ scc.config] DEBUG Found github.token 2024-03-14 16:14:35,964 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-03-14 16:14:35,964 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-14 16:14:36,010 [ scc.git] DEBUG Get sha1 of %s 2024-03-14 16:14:36,010 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:14:36,016 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-14 16:14:36,065 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-14 16:14:36,072 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdb6c6338b0> has no local changes 2024-03-14 16:14:36,072 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/1/)' 2024-03-14 16:14:36,081 [ scc.git] DEBUG [detached HEAD 047ff26] merge master -Dorg -Ssuccess-only 2024-03-14 16:14:36,082 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-14 16:14:36,082 [ scc.repo] DEBUG ## PRs found: 2024-03-14 16:14:36,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2024-03-14 16:14:37,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/543 HTTP/1.1" 200 None 2024-03-14 16:14:37,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/542 HTTP/1.1" 200 None 2024-03-14 16:14:38,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/542/comments HTTP/1.1" 200 None 2024-03-14 16:14:38,049 [ scc.repo] DEBUG # ... Include label: include 2024-03-14 16:14:38,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a2f7881214d23695413a1ee62e262b1d286ed2f5 HTTP/1.1" 200 None 2024-03-14 16:14:39,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a2f7881214d23695413a1ee62e262b1d286ed2f5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-14 16:14:39,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a2f7881214d23695413a1ee62e262b1d286ed2f5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-14 16:14:39,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a2f7881214d23695413a1ee62e262b1d286ed2f5 HTTP/1.1" 200 None 2024-03-14 16:14:40,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/a2f7881214d23695413a1ee62e262b1d286ed2f5?per_page=1 HTTP/1.1" 200 None 2024-03-14 16:14:40,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a2f7881214d23695413a1ee62e262b1d286ed2f5 HTTP/1.1" 200 None 2024-03-14 16:14:41,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a2f7881214d23695413a1ee62e262b1d286ed2f5/status HTTP/1.1" 200 None 2024-03-14 16:14:41,313 [ scc.repo] DEBUG - PR 542 Tom-TBT 'PlateAcquisition filtering with plate display' 2024-03-14 16:14:41,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/540 HTTP/1.1" 200 None 2024-03-14 16:14:42,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30 HTTP/1.1" 200 None 2024-03-14 16:14:42,555 [urllib3.conn] DEBUG Resetting dropped connection: api.github.com 2024-03-14 16:14:42,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-14 16:14:43,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-14 16:14:43,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30 HTTP/1.1" 200 None 2024-03-14 16:14:44,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/ee785db51c334b1be62c14ab36414993a2319a30?per_page=1 HTTP/1.1" 200 None 2024-03-14 16:14:44,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30 HTTP/1.1" 200 None 2024-03-14 16:14:45,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30/status HTTP/1.1" 200 None 2024-03-14 16:14:45,192 [ scc.repo] DEBUG - PR 540 will-moore 'Add 'django.template.context_processors.request' to TEMPLATES' 2024-03-14 16:14:45,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/536 HTTP/1.1" 200 None 2024-03-14 16:14:46,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/536/comments HTTP/1.1" 200 None 2024-03-14 16:14:46,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a41f2f47426759218ab74359c02a7126a10e6eb HTTP/1.1" 200 None 2024-03-14 16:14:47,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a41f2f47426759218ab74359c02a7126a10e6eb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-14 16:14:47,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a41f2f47426759218ab74359c02a7126a10e6eb/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-14 16:14:48,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a41f2f47426759218ab74359c02a7126a10e6eb HTTP/1.1" 200 None 2024-03-14 16:14:48,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/8a41f2f47426759218ab74359c02a7126a10e6eb?per_page=1 HTTP/1.1" 200 None 2024-03-14 16:14:49,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a41f2f47426759218ab74359c02a7126a10e6eb HTTP/1.1" 200 None 2024-03-14 16:14:49,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a41f2f47426759218ab74359c02a7126a10e6eb/status HTTP/1.1" 200 None 2024-03-14 16:14:49,441 [ scc.repo] DEBUG - PR 536 will-moore 'imgData JSON with no stateful services' 2024-03-14 16:14:50,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2024-03-14 16:14:50,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2024-03-14 16:14:51,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2024-03-14 16:14:51,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-03-14 16:14:51,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-14 16:14:52,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-14 16:14:52,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-03-14 16:14:53,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None 2024-03-14 16:14:53,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-03-14 16:14:54,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None 2024-03-14 16:14:54,250 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-03-14 16:14:54,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/533 HTTP/1.1" 200 None 2024-03-14 16:14:55,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545 HTTP/1.1" 200 None 2024-03-14 16:14:55,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-14 16:14:56,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-14 16:14:56,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545 HTTP/1.1" 200 None 2024-03-14 16:14:56,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/e335980be1e7197826687f6c322a60c61b4aa545?per_page=1 HTTP/1.1" 200 None 2024-03-14 16:14:57,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545 HTTP/1.1" 200 None 2024-03-14 16:14:57,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545/status HTTP/1.1" 200 None 2024-03-14 16:14:57,863 [ scc.repo] DEBUG - PR 533 jburel 'use conda-forge channel' 2024-03-14 16:14:58,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2024-03-14 16:14:58,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2024-03-14 16:14:59,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-03-14 16:14:59,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-14 16:15:00,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-14 16:15:00,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-03-14 16:15:01,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None 2024-03-14 16:15:01,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-03-14 16:15:02,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None 2024-03-14 16:15:02,040 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2024-03-14 16:15:02,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/399 HTTP/1.1" 200 None 2024-03-14 16:15:02,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/225 HTTP/1.1" 200 None 2024-03-14 16:15:03,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/225/comments HTTP/1.1" 200 None 2024-03-14 16:15:04,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/200678050/issues/225/comments?page=2 HTTP/1.1" 200 None 2024-03-14 16:15:04,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2024-03-14 16:15:04,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2024-03-14 16:15:05,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/219d9e721304a4c46b4d73ef9ff3777549d69615 HTTP/1.1" 200 None 2024-03-14 16:15:05,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/219d9e721304a4c46b4d73ef9ff3777549d69615/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-14 16:15:06,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/219d9e721304a4c46b4d73ef9ff3777549d69615 HTTP/1.1" 200 None 2024-03-14 16:15:06,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/219d9e721304a4c46b4d73ef9ff3777549d69615?per_page=1 HTTP/1.1" 200 2 2024-03-14 16:15:06,925 [ scc.repo] DEBUG - PR 168 stick 'Changes to nginx @maintenance handler' 2024-03-14 16:15:07,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/17 HTTP/1.1" 200 None 2024-03-14 16:15:07,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/17/comments HTTP/1.1" 200 None 2024-03-14 16:15:07,947 [ scc.repo] DEBUG ## Branches found: 2024-03-14 16:15:07,947 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-03-14 16:15:07,947 [ scc.git] DEBUG Get sha1 of %s 2024-03-14 16:15:07,947 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:15:07,952 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-14 16:15:07,956 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-14 16:15:07,956 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-14 16:15:07,961 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-14 16:15:07,973 [ scc.git] DEBUG Updating 99aebd2a6..eec0fd18a 2024-03-14 16:15:08,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/538 HTTP/1.1" 200 None 2024-03-14 16:15:08,512 [ scc.git] DEBUG Calling 'git fetch origin pull/168/head' 2024-03-14 16:15:10,327 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-03-14 16:15:10,328 [ scc.git] DEBUG * branch refs/pull/168/head -> FETCH_HEAD 2024-03-14 16:15:10,331 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2024-03-14 16:15:10,979 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-03-14 16:15:10,980 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2024-03-14 16:15:10,982 [ scc.git] DEBUG Calling 'git fetch origin pull/533/head' 2024-03-14 16:15:11,556 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-03-14 16:15:11,556 [ scc.git] DEBUG * branch refs/pull/533/head -> FETCH_HEAD 2024-03-14 16:15:11,558 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2024-03-14 16:15:12,142 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-03-14 16:15:12,142 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2024-03-14 16:15:12,145 [ scc.git] DEBUG Calling 'git fetch origin pull/536/head' 2024-03-14 16:15:12,784 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-03-14 16:15:12,784 [ scc.git] DEBUG * branch refs/pull/536/head -> FETCH_HEAD 2024-03-14 16:15:12,786 [ scc.git] DEBUG Calling 'git fetch origin pull/540/head' 2024-03-14 16:15:13,404 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-03-14 16:15:13,404 [ scc.git] DEBUG * branch refs/pull/540/head -> FETCH_HEAD 2024-03-14 16:15:13,407 [ scc.git] DEBUG Calling 'git fetch origin pull/542/head' 2024-03-14 16:15:14,081 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-03-14 16:15:14,081 [ scc.git] DEBUG * branch refs/pull/542/head -> FETCH_HEAD 2024-03-14 16:15:14,083 [ scc.git] DEBUG ## Unique users: [] 2024-03-14 16:15:14,084 [ scc.git] DEBUG Get sha1 of %s 2024-03-14 16:15:14,084 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:15:14,088 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...219d9e721304a4c46b4d73ef9ff3777549d69615' 2024-03-14 16:15:14,103 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:15:14,108 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 168 (Changes to nginx @maintenance handler) 219d9e721304a4c46b4d73ef9ff3777549d69615' 2024-03-14 16:15:14,137 [ scc.git] DEBUG Auto-merging test/unit/test_web.py 2024-03-14 16:15:14,137 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/unit/test_web.py 2024-03-14 16:15:14,137 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-03-14 16:15:14,138 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-03-14 16:15:14,145 [ scc.git] DEBUG Calling 'git reset --hard eec0fd18a86f1105325281178112dcb7c7b48fea' 2024-03-14 16:15:14,155 [ scc.git] DEBUG HEAD is now at eec0fd18a Bump version: 5.25.0 → 5.25.1.dev0 2024-03-14 16:15:14,158 [urllib3.conn] DEBUG Resetting dropped connection: api.github.com 2024-03-14 16:15:14,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:15:14,409 [ scc.git] DEBUG Calling 'git merge-base eec0fd18a86f1105325281178112dcb7c7b48fea 219d9e721304a4c46b4d73ef9ff3777549d69615' 2024-03-14 16:15:14,426 [ scc.git] DEBUG Calling 'git diff --name-only 632d14a9cab5319c6b1bd9190d441a95e457103b..eec0fd18a86f1105325281178112dcb7c7b48fea' 2024-03-14 16:15:14,491 [ scc.git] INFO - PR 168 stick 'Changes to nginx @maintenance handler' Conflicting PR. Removed from build [OMERO-python-superbuild-push#1](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/1/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/1/consoleText) for more details. Possible conflicts: - Upstream changes - test/unit/test_web.py --conflicts 2024-03-14 16:15:14,495 [ scc.config] DEBUG Found github.token 2024-03-14 16:15:14,496 [ scc.git] DEBUG Not adding comment to issue #168, already --conflicts. 2024-03-14 16:15:14,496 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-03-14 16:15:14,501 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:15:14,506 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-03-14 16:15:14,526 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2024-03-14 16:15:14,527 [ scc.git] DEBUG Auto-merging setup.py 2024-03-14 16:15:14,528 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-14 16:15:14,531 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2024-03-14 16:15:14,531 [ scc.git] DEBUG setup.py | 1 + 2024-03-14 16:15:14,531 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2024-03-14 16:15:14,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:15:14,833 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e335980be1e7197826687f6c322a60c61b4aa545' 2024-03-14 16:15:14,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:15:14,843 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 533 (use conda-forge channel) e335980be1e7197826687f6c322a60c61b4aa545' 2024-03-14 16:15:14,859 [ scc.git] DEBUG Auto-merging README.rst 2024-03-14 16:15:14,860 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-14 16:15:14,863 [ scc.git] DEBUG README.rst | 3 +-- 2024-03-14 16:15:14,863 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 2 deletions(-) 2024-03-14 16:15:15,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:15:15,258 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-03-14 16:15:15,264 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:15:15,269 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-03-14 16:15:15,292 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2024-03-14 16:15:15,292 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-03-14 16:15:15,293 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-14 16:15:15,297 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2024-03-14 16:15:15,297 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2024-03-14 16:15:15,297 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2024-03-14 16:15:15,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:15:15,667 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8a41f2f47426759218ab74359c02a7126a10e6eb' 2024-03-14 16:15:15,674 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:15:15,679 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 536 (imgData JSON with no stateful services) 8a41f2f47426759218ab74359c02a7126a10e6eb' 2024-03-14 16:15:15,706 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2024-03-14 16:15:15,706 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-03-14 16:15:15,707 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-14 16:15:15,712 [ scc.git] DEBUG omeroweb/webclient/views.py | 4 +- 2024-03-14 16:15:15,712 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 182 ++++++++++++++++++++++++++++++++--------- 2024-03-14 16:15:15,712 [ scc.git] DEBUG omeroweb/webgateway/util.py | 38 +++++++++ 2024-03-14 16:15:15,712 [ scc.git] DEBUG 3 files changed, 185 insertions(+), 39 deletions(-) 2024-03-14 16:15:16,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:15:16,081 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ee785db51c334b1be62c14ab36414993a2319a30' 2024-03-14 16:15:16,087 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:15:16,092 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 540 (Add 'django.template.context_processors.request' to TEMPLATES) ee785db51c334b1be62c14ab36414993a2319a30' 2024-03-14 16:15:16,112 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2024-03-14 16:15:16,113 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-14 16:15:16,116 [ scc.git] DEBUG omeroweb/settings.py | 1 + 2024-03-14 16:15:16,116 [ scc.git] DEBUG 1 file changed, 1 insertion(+) 2024-03-14 16:15:16,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:15:16,487 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a2f7881214d23695413a1ee62e262b1d286ed2f5' 2024-03-14 16:15:16,494 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:15:16,499 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 542 (PlateAcquisition filtering with plate display) a2f7881214d23695413a1ee62e262b1d286ed2f5' 2024-03-14 16:15:16,536 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2024-03-14 16:15:16,538 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-14 16:15:16,545 [ scc.git] DEBUG .../data/includes/center_plugin.thumbs.js.html | 13 ++++-------- 2024-03-14 16:15:16,546 [ scc.git] DEBUG .../webclient/templates/webclient/data/plate.html | 10 ++++----- 2024-03-14 16:15:16,546 [ scc.git] DEBUG omeroweb/webclient/views.py | 17 +++++++++++++++ 2024-03-14 16:15:16,546 [ scc.git] DEBUG omeroweb/webgateway/plategrid.py | 24 +++++++++++++++++++--- 2024-03-14 16:15:16,546 [ scc.git] DEBUG .../static/webgateway/js/ome.plateview.js | 15 ++++++++------ 2024-03-14 16:15:16,546 [ scc.git] DEBUG omeroweb/webgateway/urls.py | 2 +- 2024-03-14 16:15:16,546 [ scc.git] DEBUG omeroweb/webgateway/views.py | 9 ++++++-- 2024-03-14 16:15:16,546 [ scc.git] DEBUG 7 files changed, 64 insertions(+), 26 deletions(-) 2024-03-14 16:15:16,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:15:16,904 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-14 16:15:16,942 [ scc.git] DEBUG Get sha1 of %s 2024-03-14 16:15:16,942 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-14 16:15:16,947 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-14 16:15:16,983 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-14 16:15:16,994 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdb6c5fb430> has no local changes 2024-03-14 16:15:16,995 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 543 knabar 'Make long-running tasks like "Save to all" more robust' (stage: draft) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 399 will-moore 'Handle chgrp dry-run LogicalChannel[ID] to show images' (stage: draft) - PR 225 will-moore 'Query string ids' (exclude comment) - PR 17 will-moore 'Right panel performance fixes' (exclude comment) Updating 99aebd2a6..eec0fd18a Previously merged: - PR 538 knabar 'Change log for 5.25.0' Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 533 jburel 'use conda-forge channel' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 536 will-moore 'imgData JSON with no stateful services' - PR 540 will-moore 'Add 'django.template.context_processors.request' to TEMPLATES' - PR 542 Tom-TBT 'PlateAcquisition filtering with plate display' Conflicting PRs (not included): - PR 168 stick 'Changes to nginx @maintenance handler' Generated by OMERO-python-superbuild-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/1/)' 2024-03-14 16:15:17,008 [ scc.git] DEBUG [detached HEAD b35d7ed73] merge master -Dorg -Ssuccess-only 2024-03-14 16:15:17,008 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-14 16:15:17,008 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-14 16:15:17,055 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2024-03-14 16:15:17,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:15:17,363 [ scc.config] DEBUG Found submodule.omero-marshal.url 2024-03-14 16:15:17,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:15:17,756 [ scc.config] DEBUG Found submodule.omero-py.url 2024-03-14 16:15:18,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:15:18,166 [ scc.config] DEBUG Found submodule.omero-scripts.url 2024-03-14 16:15:18,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:15:18,576 [ scc.config] DEBUG Found submodule.omero-web.url 2024-03-14 16:15:18,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-14 16:15:18,978 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-14 16:15:19,006 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdb6d9971f0> has local changes 2024-03-14 16:15:19,007 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' - PR 23 sbesson 'Remove python-future compatibility code' Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 400 jburel 'Session ID and constructor' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 394 jo-mueller 'added `_repr_html_` method for `_ImageWrapper`' (user: jo-mueller) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 398 will-moore 'getGridSize() handles plates with no Wells' Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 543 knabar 'Make long-running tasks like "Save to all" more robust' (stage: draft) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 399 will-moore 'Handle chgrp dry-run LogicalChannel[ID] to show images' (stage: draft) - PR 225 will-moore 'Query string ids' (exclude comment) - PR 17 will-moore 'Right panel performance fixes' (exclude comment) Updating 99aebd2a6..eec0fd18a Previously merged: - PR 538 knabar 'Change log for 5.25.0' Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 533 jburel 'use conda-forge channel' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 536 will-moore 'imgData JSON with no stateful services' - PR 540 will-moore 'Add 'django.template.context_processors.request' to TEMPLATES' - PR 542 Tom-TBT 'PlateAcquisition filtering with plate display' Conflicting PRs (not included): - PR 168 stick 'Changes to nginx @maintenance handler' Generated by OMERO-python-superbuild-push#1 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/1/)' 2024-03-14 16:15:19,016 [ scc.git] DEBUG [detached HEAD 6b0f95b] merge master -Dorg -Ssuccess-only 2024-03-14 16:15:19,016 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-03-14 16:15:19,016 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2024-03-14 16:15:19,016 [ scc.merge] INFO Already up to date. 2024-03-14 16:15:19,016 [ scc.merge] INFO 2024-03-14 16:15:19,017 [ scc.merge] INFO 2024-03-14 16:15:19,017 [ scc.merge] INFO Repository: ome/omero-dropbox 2024-03-14 16:15:19,017 [ scc.merge] INFO Already up to date. 2024-03-14 16:15:19,017 [ scc.merge] INFO 2024-03-14 16:15:19,017 [ scc.merge] INFO Merged PRs: 2024-03-14 16:15:19,017 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-03-14 16:15:19,017 [ scc.merge] INFO - PR 23 sbesson 'Remove python-future compatibility code' 2024-03-14 16:15:19,017 [ scc.merge] INFO 2024-03-14 16:15:19,017 [ scc.merge] INFO Repository: ome/omero-marshal 2024-03-14 16:15:19,017 [ scc.merge] INFO Excluded PRs: 2024-03-14 16:15:19,017 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2024-03-14 16:15:19,017 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2024-03-14 16:15:19,017 [ scc.merge] INFO Already up to date. 2024-03-14 16:15:19,017 [ scc.merge] INFO 2024-03-14 16:15:19,017 [ scc.merge] INFO Merged PRs: 2024-03-14 16:15:19,017 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2024-03-14 16:15:19,017 [ scc.merge] INFO 2024-03-14 16:15:19,017 [ scc.merge] INFO Repository: ome/omero-py 2024-03-14 16:15:19,017 [ scc.merge] INFO Excluded PRs: 2024-03-14 16:15:19,017 [ scc.merge] INFO - PR 400 jburel 'Session ID and constructor' (label: exclude) 2024-03-14 16:15:19,017 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2024-03-14 16:15:19,017 [ scc.merge] INFO - PR 394 jo-mueller 'added `_repr_html_` method for `_ImageWrapper`' (user: jo-mueller) 2024-03-14 16:15:19,017 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude) 2024-03-14 16:15:19,017 [ scc.merge] INFO - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu) 2024-03-14 16:15:19,017 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) 2024-03-14 16:15:19,017 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) 2024-03-14 16:15:19,018 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) 2024-03-14 16:15:19,018 [ scc.merge] INFO Already up to date. 2024-03-14 16:15:19,018 [ scc.merge] INFO 2024-03-14 16:15:19,018 [ scc.merge] INFO Merged PRs: 2024-03-14 16:15:19,018 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2024-03-14 16:15:19,018 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error' 2024-03-14 16:15:19,018 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-03-14 16:15:19,018 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' 2024-03-14 16:15:19,018 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2024-03-14 16:15:19,018 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-03-14 16:15:19,018 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2024-03-14 16:15:19,018 [ scc.merge] INFO - PR 398 will-moore 'getGridSize() handles plates with no Wells' 2024-03-14 16:15:19,018 [ scc.merge] INFO 2024-03-14 16:15:19,018 [ scc.merge] INFO Repository: ome/omero-scripts 2024-03-14 16:15:19,018 [ scc.merge] INFO Excluded PRs: 2024-03-14 16:15:19,018 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-03-14 16:15:19,018 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-03-14 16:15:19,018 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-03-14 16:15:19,018 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-03-14 16:15:19,018 [ scc.merge] INFO Already up to date. 2024-03-14 16:15:19,018 [ scc.merge] INFO 2024-03-14 16:15:19,018 [ scc.merge] INFO Conflicting PRs (not included): 2024-03-14 16:15:19,018 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-03-14 16:15:19,018 [ scc.merge] INFO 2024-03-14 16:15:19,018 [ scc.merge] INFO Repository: ome/omero-web 2024-03-14 16:15:19,018 [ scc.merge] INFO Excluded PRs: 2024-03-14 16:15:19,018 [ scc.merge] INFO - PR 543 knabar 'Make long-running tasks like "Save to all" more robust' (stage: draft) 2024-03-14 16:15:19,018 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2024-03-14 16:15:19,018 [ scc.merge] INFO - PR 399 will-moore 'Handle chgrp dry-run LogicalChannel[ID] to show images' (stage: draft) 2024-03-14 16:15:19,018 [ scc.merge] INFO - PR 225 will-moore 'Query string ids' (exclude comment) 2024-03-14 16:15:19,018 [ scc.merge] INFO - PR 17 will-moore 'Right panel performance fixes' (exclude comment) 2024-03-14 16:15:19,018 [ scc.merge] INFO Updating 99aebd2a6..eec0fd18a 2024-03-14 16:15:19,018 [ scc.merge] INFO Previously merged: 2024-03-14 16:15:19,019 [ scc.merge] INFO - PR 538 knabar 'Change log for 5.25.0' 2024-03-14 16:15:19,019 [ scc.merge] INFO 2024-03-14 16:15:19,019 [ scc.merge] INFO Merged PRs: 2024-03-14 16:15:19,019 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2024-03-14 16:15:19,019 [ scc.merge] INFO - PR 533 jburel 'use conda-forge channel' 2024-03-14 16:15:19,019 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-03-14 16:15:19,019 [ scc.merge] INFO - PR 536 will-moore 'imgData JSON with no stateful services' 2024-03-14 16:15:19,019 [ scc.merge] INFO - PR 540 will-moore 'Add 'django.template.context_processors.request' to TEMPLATES' 2024-03-14 16:15:19,019 [ scc.merge] INFO - PR 542 Tom-TBT 'PlateAcquisition filtering with plate display' 2024-03-14 16:15:19,019 [ scc.merge] INFO 2024-03-14 16:15:19,019 [ scc.merge] INFO Conflicting PRs (not included): 2024-03-14 16:15:19,019 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' 2024-03-14 16:15:19,019 [ scc.merge] INFO 2024-03-14 16:15:19,019 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-03-14 16:15:19,019 [ scc.git] DEBUG Calling 'git remote' 2024-03-14 16:15:19,023 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-03-14 16:15:19,023 [ scc.git] DEBUG Calling 'git remote' 2024-03-14 16:15:19,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-14 16:15:19,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-03-14 16:15:19,027 [ scc.git] DEBUG Calling 'git remote' 2024-03-14 16:15:19,031 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-14 16:15:19,031 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-03-14 16:15:19,031 [ scc.git] DEBUG Calling 'git remote' 2024-03-14 16:15:19,035 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-14 16:15:19,035 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-03-14 16:15:19,035 [ scc.git] DEBUG Calling 'git remote' 2024-03-14 16:15:19,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-14 16:15:19,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-03-14 16:15:19,039 [ scc.git] DEBUG Calling 'git remote' 2024-03-14 16:15:19,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/usr/lib64/python3.9/urllib/request.py", line 1346, in do_open h.request(req.get_method(), req.selector, req.data, headers, File "/usr/lib64/python3.9/http/client.py", line 1285, in request self._send_request(method, url, body, headers, encode_chunked) File "/usr/lib64/python3.9/http/client.py", line 1331, in _send_request self.endheaders(body, encode_chunked=encode_chunked) File "/usr/lib64/python3.9/http/client.py", line 1280, in endheaders self._send_output(message_body, encode_chunked=encode_chunked) File "/usr/lib64/python3.9/http/client.py", line 1040, in _send_output self.send(msg) File "/usr/lib64/python3.9/http/client.py", line 980, in send self.connect() File "/usr/lib64/python3.9/http/client.py", line 1447, in connect super().connect() File "/usr/lib64/python3.9/http/client.py", line 946, in connect self.sock = self._create_connection( File "/usr/lib64/python3.9/socket.py", line 823, in create_connection for res in getaddrinfo(host, port, 0, SOCK_STREAM): File "/usr/lib64/python3.9/socket.py", line 954, in getaddrinfo for res in _socket.getaddrinfo(host, port, family, type, proto, flags): socket.gaierror: [Errno -2] Name or service not known During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 517, in open response = self._open(req, data) File "/usr/lib64/python3.9/urllib/request.py", line 534, in _open result = self._call_chain(self.handle_open, protocol, protocol + File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 1389, in https_open return self.do_open(http.client.HTTPSConnection, req, File "/usr/lib64/python3.9/urllib/request.py", line 1349, in do_open raise URLError(err) urllib.error.URLError: <urlopen error [Errno -2] Name or service not known> Downloading https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/usr/lib64/python3.9/urllib/request.py", line 1346, in do_open h.request(req.get_method(), req.selector, req.data, headers, File "/usr/lib64/python3.9/http/client.py", line 1285, in request self._send_request(method, url, body, headers, encode_chunked) File "/usr/lib64/python3.9/http/client.py", line 1331, in _send_request self.endheaders(body, encode_chunked=encode_chunked) File "/usr/lib64/python3.9/http/client.py", line 1280, in endheaders self._send_output(message_body, encode_chunked=encode_chunked) File "/usr/lib64/python3.9/http/client.py", line 1040, in _send_output self.send(msg) File "/usr/lib64/python3.9/http/client.py", line 980, in send self.connect() File "/usr/lib64/python3.9/http/client.py", line 1447, in connect super().connect() File "/usr/lib64/python3.9/http/client.py", line 946, in connect self.sock = self._create_connection( File "/usr/lib64/python3.9/socket.py", line 823, in create_connection for res in getaddrinfo(host, port, 0, SOCK_STREAM): File "/usr/lib64/python3.9/socket.py", line 954, in getaddrinfo for res in _socket.getaddrinfo(host, port, family, type, proto, flags): socket.gaierror: [Errno -2] Name or service not known During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 517, in open response = self._open(req, data) File "/usr/lib64/python3.9/urllib/request.py", line 534, in _open result = self._call_chain(self.handle_open, protocol, protocol + File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 1389, in https_open return self.do_open(http.client.HTTPSConnection, req, File "/usr/lib64/python3.9/urllib/request.py", line 1349, in do_open raise URLError(err) urllib.error.URLError: <urlopen error [Errno -2] Name or service not known> grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 5863350 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from cca4c2f nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 0dc60bd6 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 2078ac7 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 99aebd2a6 nothing to commit, working tree clean HEAD detached from 2c91b66 nothing to commit, working tree clean 2024-03-14 16:15:48,721 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS