![[Jenkins]](/jenkins/static/d0200910/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 125 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 46d23a10cf256e32fdc6117450f4d20a3cff5c17 (refs/remotes/origin/master) Commit message: "Merge pull request #284 from ome/dependabot/submodules/omero-web-5a2cd79" > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 46d23a10cf256e32fdc6117450f4d20a3cff5c17 # timeout=10 > git rev-list --no-walk 46d23a10cf256e32fdc6117450f4d20a3cff5c17 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 112 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3 -m venv build/venv > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.1.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.1.1 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.19-py2.py3-none-any.whl.metadata (49 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.7.4-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.19-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.7.4-py3-none-any.whl (162 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl (3.9 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.7.4 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.8 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.19 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-07-05 00:34:40,522 [ scc.config] DEBUG Found github.token 2024-07-05 00:34:40,525 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-07-05 00:34:40,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:34:41,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:34:41,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-07-05 00:34:41,624 [ scc.gh] DEBUG 4375 remaining from 5000 (Reset at 00:07 2024-07-05 00:34:41,624 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:34:41,628 [ scc.git] DEBUG Check current status 2024-07-05 00:34:41,629 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:34:41,633 [ scc.git] DEBUG 46d23a1 Merge pull request #284 from ome/dependabot/submodules/omero-web-5a2cd79 2024-07-05 00:34:41,633 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:34:41,673 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-07-05 00:34:41,676 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-07-05 00:34:41,680 [ scc.git] DEBUG 8d8108de02104c654741d65f0ecbbf11c85e329d omero-py (v5.19.3-1-g8d8108de) 2024-07-05 00:34:41,684 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273) 2024-07-05 00:34:41,687 [ scc.git] DEBUG 5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7) 2024-07-05 00:34:41,691 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:34:42,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-07-05 00:34:42,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:34:42,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:34:43,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:34:43,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:34:43,912 [ scc.git] DEBUG Resetting... 2024-07-05 00:34:43,912 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-07-05 00:34:43,918 [ scc.git] DEBUG HEAD is now at 46d23a1 Merge pull request #284 from ome/dependabot/submodules/omero-web-5a2cd79 2024-07-05 00:34:43,918 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-07-05 00:34:43,968 [ scc.git] DEBUG Check current status 2024-07-05 00:34:43,968 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:34:43,973 [ scc.git] DEBUG 46d23a1 Merge pull request #284 from ome/dependabot/submodules/omero-web-5a2cd79 2024-07-05 00:34:43,973 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:34:44,012 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-07-05 00:34:44,015 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-07-05 00:34:44,018 [ scc.git] DEBUG 8d8108de02104c654741d65f0ecbbf11c85e329d omero-py (v5.19.3-1-g8d8108de) 2024-07-05 00:34:44,022 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273) 2024-07-05 00:34:44,025 [ scc.git] DEBUG 5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7) 2024-07-05 00:34:44,026 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-07-05 00:34:44,026 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-07-05 00:34:44,026 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-07-05 00:34:44,026 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-07-05 00:34:44,026 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-07-05 00:34:44,026 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:34:44,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2024-07-05 00:34:44,347 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:34:44,347 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:34:44,347 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:34:44,352 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:34:44,355 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:34:44,355 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:34:44,359 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:34:44,364 [ scc.git] DEBUG Already up to date. 2024-07-05 00:34:44,365 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:34:44,365 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:34:44,365 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:34:44,372 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:34:44,410 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:34:44,410 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:34:44,414 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:34:44,698 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f73427ffd60> has no local changes 2024-07-05 00:34:44,699 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/110/)' 2024-07-05 00:34:44,722 [ scc.git] DEBUG [detached HEAD c8bf313] merge master -Dorg -Snone 2024-07-05 00:34:44,722 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-07-05 00:34:44,722 [ scc.merge] INFO Already up to date. 2024-07-05 00:34:44,722 [ scc.merge] INFO 2024-07-05 00:34:44,722 [ scc.merge] INFO 2024-07-05 00:34:44,723 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-07-05 00:34:44,723 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-07-05 00:34:47,185 [ scc.config] DEBUG Found github.token 2024-07-05 00:34:47,187 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-07-05 00:34:47,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:34:47,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:34:48,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-07-05 00:34:48,245 [ scc.gh] DEBUG 4367 remaining from 5000 (Reset at 00:07 2024-07-05 00:34:48,246 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:34:48,251 [ scc.git] DEBUG Check current status 2024-07-05 00:34:48,251 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:34:48,256 [ scc.git] DEBUG c8bf313 merge master -Dorg -Snone 2024-07-05 00:34:48,257 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:34:48,327 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-07-05 00:34:48,330 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-07-05 00:34:48,334 [ scc.git] DEBUG 8d8108de02104c654741d65f0ecbbf11c85e329d omero-py (v5.19.3-1-g8d8108de) 2024-07-05 00:34:48,339 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273) 2024-07-05 00:34:48,343 [ scc.git] DEBUG 5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7) 2024-07-05 00:34:48,350 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:34:48,351 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-07-05 00:34:48,353 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-07-05 00:34:48,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-07-05 00:34:49,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:34:49,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:34:50,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:34:50,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:34:50,580 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:34:50,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-07-05 00:34:50,628 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:34:50,631 [ scc.git] DEBUG Check current status 2024-07-05 00:34:50,631 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:34:50,635 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0 2024-07-05 00:34:50,635 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:34:50,679 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:34:51,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2024-07-05 00:34:51,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:34:51,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:34:52,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:34:52,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:34:52,770 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:34:52,810 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-05 00:34:52,812 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-07-05 00:34:52,812 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:34:52,817 [ scc.git] DEBUG Check current status 2024-07-05 00:34:52,817 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:34:52,821 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312 2024-07-05 00:34:52,821 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:34:52,862 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:34:53,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2024-07-05 00:34:53,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:34:54,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:34:54,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:34:54,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:34:54,979 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:34:55,019 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-05 00:34:55,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-07-05 00:34:55,020 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:34:55,024 [ scc.git] DEBUG Check current status 2024-07-05 00:34:55,024 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:34:55,045 [ scc.git] DEBUG 8d8108de Bump version: 5.19.3 → 5.19.4.dev0 2024-07-05 00:34:55,046 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:34:55,091 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:34:55,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2024-07-05 00:34:55,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:34:56,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:34:56,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:34:57,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:34:57,139 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:34:57,181 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-05 00:34:57,182 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-07-05 00:34:57,182 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:34:57,187 [ scc.git] DEBUG Check current status 2024-07-05 00:34:57,187 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:34:57,206 [ scc.git] DEBUG c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-07-05 00:34:57,207 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:34:57,254 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:34:57,255 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-07-05 00:34:57,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2024-07-05 00:34:58,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:34:58,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:34:58,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:34:59,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:34:59,328 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:34:59,368 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-05 00:34:59,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-07-05 00:34:59,370 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-05 00:34:59,374 [ scc.git] DEBUG Check current status 2024-07-05 00:34:59,374 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:34:59,391 [ scc.git] DEBUG 5a2cd79d7 Merge pull request #561 from jburel/numpy_less_than_2 2024-07-05 00:34:59,392 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:34:59,440 [ scc.config] DEBUG Found remote.origin.url 2024-07-05 00:34:59,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2024-07-05 00:35:00,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-05 00:35:00,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-05 00:35:01,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-05 00:35:01,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-05 00:35:01,579 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:35:01,621 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-05 00:35:01,621 [ scc.git] DEBUG Resetting... 2024-07-05 00:35:01,622 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-07-05 00:35:01,628 [ scc.git] DEBUG HEAD is now at c8bf313 merge master -Dorg -Snone 2024-07-05 00:35:01,628 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-07-05 00:35:01,684 [ scc.git] DEBUG Check current status 2024-07-05 00:35:01,684 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-05 00:35:01,689 [ scc.git] DEBUG c8bf313 merge master -Dorg -Snone 2024-07-05 00:35:01,689 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-05 00:35:01,734 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-07-05 00:35:01,737 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-07-05 00:35:01,741 [ scc.git] DEBUG 8d8108de02104c654741d65f0ecbbf11c85e329d omero-py (v5.19.3-1-g8d8108de) 2024-07-05 00:35:01,745 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273) 2024-07-05 00:35:01,748 [ scc.git] DEBUG 5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7) 2024-07-05 00:35:01,749 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-07-05 00:35:01,749 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-07-05 00:35:01,749 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-07-05 00:35:01,749 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-07-05 00:35:01,749 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-07-05 00:35:01,749 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-07-05 00:35:01,750 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:35:02,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2024-07-05 00:35:02,074 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:35:02,074 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:35:02,074 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:35:02,079 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:35:02,084 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:35:02,084 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:35:02,090 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:35:02,095 [ scc.git] DEBUG Already up to date. 2024-07-05 00:35:02,095 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:35:02,095 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:35:02,095 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:35:02,099 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:35:02,139 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:35:02,139 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:35:02,143 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:35:02,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2024-07-05 00:35:03,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2024-07-05 00:35:03,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2024-07-05 00:35:04,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-07-05 00:35:04,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:35:05,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-07-05 00:35:05,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:35:05,549 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-07-05 00:35:05,549 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:35:05,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-07-05 00:35:05,549 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:35:05,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:35:05,554 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:35:05,559 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:35:05,559 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:35:05,564 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:35:05,570 [ scc.git] DEBUG Already up to date. 2024-07-05 00:35:05,570 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2024-07-05 00:35:06,172 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2024-07-05 00:35:06,173 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2024-07-05 00:35:06,177 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:35:06,177 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:35:06,177 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:35:06,181 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-07-05 00:35:06,186 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:35:06,189 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-07-05 00:35:06,202 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2024-07-05 00:35:06,203 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2024-07-05 00:35:06,203 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2024-07-05 00:35:06,203 [ scc.git] DEBUG Auto-merging src/fsLists.py 2024-07-05 00:35:06,203 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2024-07-05 00:35:06,203 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2024-07-05 00:35:06,203 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2024-07-05 00:35:06,203 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2024-07-05 00:35:06,203 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2024-07-05 00:35:06,204 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:35:06,208 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2024-07-05 00:35:06,208 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2024-07-05 00:35:06,208 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2024-07-05 00:35:06,208 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2024-07-05 00:35:06,208 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2024-07-05 00:35:06,208 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2024-07-05 00:35:06,208 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2024-07-05 00:35:06,208 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2024-07-05 00:35:06,208 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2024-07-05 00:35:06,208 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2024-07-05 00:35:06,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:35:06,427 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:35:06,464 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:35:06,464 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:35:06,468 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:35:06,504 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:35:06,509 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9a3240bf70> has no local changes 2024-07-05 00:35:06,510 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/110/)' 2024-07-05 00:35:06,518 [ scc.git] DEBUG [detached HEAD bd0f9ca] merge master -Dorg -Ssuccess-only 2024-07-05 00:35:06,518 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-05 00:35:06,518 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:35:06,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2024-07-05 00:35:07,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2024-07-05 00:35:07,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2024-07-05 00:35:08,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-07-05 00:35:08,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:35:09,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-07-05 00:35:09,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:35:09,802 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2024-07-05 00:35:10,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2024-07-05 00:35:10,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2024-07-05 00:35:11,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2024-07-05 00:35:11,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2024-07-05 00:35:11,674 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:35:11,674 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-07-05 00:35:11,674 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:35:11,675 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:35:11,679 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:35:11,683 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:35:11,683 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:35:11,687 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:35:11,692 [ scc.git] DEBUG Already up to date. 2024-07-05 00:35:11,693 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2024-07-05 00:35:12,315 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2024-07-05 00:35:12,315 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2024-07-05 00:35:12,320 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:35:12,321 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:35:12,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:35:12,326 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-07-05 00:35:12,331 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:35:12,335 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-07-05 00:35:12,346 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2024-07-05 00:35:12,346 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:35:12,349 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2024-07-05 00:35:12,349 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2024-07-05 00:35:12,349 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2024-07-05 00:35:12,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:35:12,525 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:35:12,569 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:35:12,570 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:35:12,575 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:35:12,613 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:35:12,619 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9a3240b700> has no local changes 2024-07-05 00:35:12,619 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/110/)' 2024-07-05 00:35:12,627 [ scc.git] DEBUG [detached HEAD aa27839] merge master -Dorg -Ssuccess-only 2024-07-05 00:35:12,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-05 00:35:12,628 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:35:13,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2024-07-05 00:35:13,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/418 HTTP/1.1" 200 None 2024-07-05 00:35:14,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/418/comments HTTP/1.1" 200 None 2024-07-05 00:35:14,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/8636894b410e1ed99ad9a9819673808c4589fe36 HTTP/1.1" 200 None 2024-07-05 00:35:15,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/8636894b410e1ed99ad9a9819673808c4589fe36/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:35:15,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/8636894b410e1ed99ad9a9819673808c4589fe36/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:35:16,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/8636894b410e1ed99ad9a9819673808c4589fe36 HTTP/1.1" 200 None 2024-07-05 00:35:16,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/8636894b410e1ed99ad9a9819673808c4589fe36?per_page=1 HTTP/1.1" 200 None 2024-07-05 00:35:17,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/8636894b410e1ed99ad9a9819673808c4589fe36 HTTP/1.1" 200 None 2024-07-05 00:35:17,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/8636894b410e1ed99ad9a9819673808c4589fe36/status HTTP/1.1" 200 None 2024-07-05 00:35:17,581 [ scc.repo] DEBUG - PR 418 chris-allan 'Allow a caller to ignore row numbers' 2024-07-05 00:35:18,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/417 HTTP/1.1" 200 None 2024-07-05 00:35:18,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/417/comments HTTP/1.1" 200 None 2024-07-05 00:35:19,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/78935e06b5466c326a526f704ad68bad8fcfdc3a HTTP/1.1" 200 None 2024-07-05 00:35:19,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/78935e06b5466c326a526f704ad68bad8fcfdc3a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:35:20,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/78935e06b5466c326a526f704ad68bad8fcfdc3a/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:35:20,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/78935e06b5466c326a526f704ad68bad8fcfdc3a HTTP/1.1" 200 None 2024-07-05 00:35:20,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/78935e06b5466c326a526f704ad68bad8fcfdc3a?per_page=1 HTTP/1.1" 200 None 2024-07-05 00:35:21,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/78935e06b5466c326a526f704ad68bad8fcfdc3a HTTP/1.1" 200 None 2024-07-05 00:35:21,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/78935e06b5466c326a526f704ad68bad8fcfdc3a/status HTTP/1.1" 200 None 2024-07-05 00:35:21,878 [ scc.repo] DEBUG - PR 417 chris-allan 'Switch result logging to DEBUG level' 2024-07-05 00:35:22,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/416 HTTP/1.1" 200 None 2024-07-05 00:35:22,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1ab716157039f8bc7a30e9d0fd5e1d23ff9af183 HTTP/1.1" 200 None 2024-07-05 00:35:23,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1ab716157039f8bc7a30e9d0fd5e1d23ff9af183/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:35:23,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1ab716157039f8bc7a30e9d0fd5e1d23ff9af183/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:35:24,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1ab716157039f8bc7a30e9d0fd5e1d23ff9af183 HTTP/1.1" 200 None 2024-07-05 00:35:24,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/1ab716157039f8bc7a30e9d0fd5e1d23ff9af183?per_page=1 HTTP/1.1" 200 None 2024-07-05 00:35:25,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1ab716157039f8bc7a30e9d0fd5e1d23ff9af183 HTTP/1.1" 200 None 2024-07-05 00:35:25,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1ab716157039f8bc7a30e9d0fd5e1d23ff9af183/status HTTP/1.1" 200 None 2024-07-05 00:35:25,557 [ scc.repo] DEBUG - PR 416 sbesson 'Parse omero.logging properties under new Logging heading' 2024-07-05 00:35:26,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/415 HTTP/1.1" 200 None 2024-07-05 00:35:26,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2024-07-05 00:35:26,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2024-07-05 00:35:27,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-07-05 00:35:27,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:35:28,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:35:28,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-07-05 00:35:29,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None 2024-07-05 00:35:29,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-07-05 00:35:30,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None 2024-07-05 00:35:30,242 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2024-07-05 00:35:30,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2024-07-05 00:35:31,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2024-07-05 00:35:31,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2024-07-05 00:35:32,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:35:32,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:35:33,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2024-07-05 00:35:33,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-07-05 00:35:34,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:35:34,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:35:35,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-07-05 00:35:35,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None 2024-07-05 00:35:35,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-07-05 00:35:36,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None 2024-07-05 00:35:36,415 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2024-07-05 00:35:36,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None 2024-07-05 00:35:36,880 [ scc.repo] DEBUG # ... Exclude label: exclude 2024-07-05 00:35:37,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None 2024-07-05 00:35:37,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None 2024-07-05 00:35:38,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-07-05 00:35:38,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:35:39,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-07-05 00:35:39,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:35:39,673 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-07-05 00:35:40,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2024-07-05 00:35:40,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2024-07-05 00:35:41,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-07-05 00:35:41,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:35:42,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:35:42,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-07-05 00:35:42,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None 2024-07-05 00:35:43,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-07-05 00:35:43,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None 2024-07-05 00:35:43,815 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2024-07-05 00:35:44,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None 2024-07-05 00:35:44,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None 2024-07-05 00:35:45,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2024-07-05 00:35:45,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2024-07-05 00:35:46,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-07-05 00:35:46,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:35:47,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-07-05 00:35:47,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:35:47,591 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj' 2024-07-05 00:35:48,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None 2024-07-05 00:35:48,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-07-05 00:35:49,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:35:49,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-07-05 00:35:49,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:35:49,946 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-07-05 00:35:50,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None 2024-07-05 00:35:50,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None 2024-07-05 00:35:51,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-07-05 00:35:51,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:35:52,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-07-05 00:35:52,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:35:52,836 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error' 2024-07-05 00:35:53,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2024-07-05 00:35:53,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2024-07-05 00:35:54,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-07-05 00:35:54,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:35:55,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-07-05 00:35:55,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:35:55,662 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2024-07-05 00:35:56,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None 2024-07-05 00:35:56,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None 2024-07-05 00:35:57,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None 2024-07-05 00:35:57,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None 2024-07-05 00:35:57,533 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:35:57,533 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-07-05 00:35:57,533 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:35:57,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:35:57,540 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:35:57,544 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:35:57,544 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:35:57,549 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:35:57,553 [ scc.git] DEBUG Already up to date. 2024-07-05 00:35:57,553 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2024-07-05 00:35:58,432 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-05 00:35:58,432 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2024-07-05 00:35:58,438 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head' 2024-07-05 00:35:58,797 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-05 00:35:58,797 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD 2024-07-05 00:35:58,802 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head' 2024-07-05 00:35:59,154 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-05 00:35:59,155 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD 2024-07-05 00:35:59,159 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head' 2024-07-05 00:35:59,624 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-05 00:35:59,625 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD 2024-07-05 00:35:59,629 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2024-07-05 00:35:59,989 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-05 00:35:59,989 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2024-07-05 00:35:59,994 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head' 2024-07-05 00:36:00,580 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-05 00:36:00,580 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD 2024-07-05 00:36:00,585 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2024-07-05 00:36:01,001 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-05 00:36:01,001 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2024-07-05 00:36:01,007 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2024-07-05 00:36:01,708 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-05 00:36:01,708 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2024-07-05 00:36:01,714 [ scc.git] DEBUG Calling 'git fetch origin pull/416/head' 2024-07-05 00:36:02,131 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-05 00:36:02,131 [ scc.git] DEBUG * branch refs/pull/416/head -> FETCH_HEAD 2024-07-05 00:36:02,136 [ scc.git] DEBUG Calling 'git fetch origin pull/417/head' 2024-07-05 00:36:02,544 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-05 00:36:02,544 [ scc.git] DEBUG * branch refs/pull/417/head -> FETCH_HEAD 2024-07-05 00:36:02,549 [ scc.git] DEBUG Calling 'git fetch origin pull/418/head' 2024-07-05 00:36:03,019 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-05 00:36:03,019 [ scc.git] DEBUG * branch refs/pull/418/head -> FETCH_HEAD 2024-07-05 00:36:03,025 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:36:03,025 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:36:03,025 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:03,029 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-07-05 00:36:03,040 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:03,044 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-07-05 00:36:03,188 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2024-07-05 00:36:03,189 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2024-07-05 00:36:03,190 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:36:03,194 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2024-07-05 00:36:03,194 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2024-07-05 00:36:03,194 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2024-07-05 00:36:03,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:36:03,355 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-07-05 00:36:03,367 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:03,371 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-07-05 00:36:03,531 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-07-05 00:36:03,531 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py 2024-07-05 00:36:03,531 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:36:03,539 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------ 2024-07-05 00:36:03,539 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++ 2024-07-05 00:36:03,539 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-) 2024-07-05 00:36:03,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:36:03,756 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-07-05 00:36:03,767 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:03,773 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-07-05 00:36:03,853 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py 2024-07-05 00:36:03,854 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:36:03,858 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++---- 2024-07-05 00:36:03,858 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-) 2024-07-05 00:36:04,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:36:04,174 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a' 2024-07-05 00:36:04,186 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:04,191 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a' 2024-07-05 00:36:04,318 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py 2024-07-05 00:36:04,318 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py 2024-07-05 00:36:04,320 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:36:04,323 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++- 2024-07-05 00:36:04,323 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +- 2024-07-05 00:36:04,324 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-) 2024-07-05 00:36:04,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:36:04,587 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-07-05 00:36:04,600 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:04,604 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-07-05 00:36:04,641 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:36:04,644 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2024-07-05 00:36:04,644 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2024-07-05 00:36:04,644 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2024-07-05 00:36:04,644 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2024-07-05 00:36:04,644 [ scc.git] DEBUG create mode 100644 connect.py 2024-07-05 00:36:04,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:36:04,994 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-07-05 00:36:05,006 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:05,011 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-07-05 00:36:05,139 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py 2024-07-05 00:36:05,140 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:36:05,143 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++ 2024-07-05 00:36:05,143 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-07-05 00:36:05,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:36:05,413 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2024-07-05 00:36:05,426 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:05,433 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2024-07-05 00:36:05,538 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2024-07-05 00:36:05,539 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:36:05,543 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2024-07-05 00:36:05,543 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2024-07-05 00:36:05,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:36:05,832 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2024-07-05 00:36:05,844 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:05,848 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2024-07-05 00:36:05,972 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-07-05 00:36:05,973 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:36:05,980 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2024-07-05 00:36:05,980 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2024-07-05 00:36:06,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:36:06,252 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1ab716157039f8bc7a30e9d0fd5e1d23ff9af183' 2024-07-05 00:36:06,266 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:06,270 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 416 (Parse omero.logging properties under new Logging heading) 1ab716157039f8bc7a30e9d0fd5e1d23ff9af183' 2024-07-05 00:36:06,356 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:36:06,358 [ scc.git] DEBUG src/omero/install/config_parser.py | 2 ++ 2024-07-05 00:36:06,359 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-07-05 00:36:06,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:36:06,670 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78935e06b5466c326a526f704ad68bad8fcfdc3a' 2024-07-05 00:36:06,683 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:06,687 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 417 (Switch result logging to DEBUG level) 78935e06b5466c326a526f704ad68bad8fcfdc3a' 2024-07-05 00:36:06,753 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:36:06,756 [ scc.git] DEBUG src/omero/util/decorators.py | 5 ++++- 2024-07-05 00:36:06,756 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 1 deletion(-) 2024-07-05 00:36:07,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:36:07,077 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8636894b410e1ed99ad9a9819673808c4589fe36' 2024-07-05 00:36:07,090 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:07,095 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 418 (Allow a caller to ignore row numbers) 8636894b410e1ed99ad9a9819673808c4589fe36' 2024-07-05 00:36:07,126 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:36:07,130 [ scc.git] DEBUG src/omero/hdfstorageV2.py | 18 +++++++++++++----- 2024-07-05 00:36:07,130 [ scc.git] DEBUG 1 file changed, 13 insertions(+), 5 deletions(-) 2024-07-05 00:36:07,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:36:07,483 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:36:07,528 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:36:07,529 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:07,534 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:36:07,573 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:36:07,581 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9a3132aca0> has no local changes 2024-07-05 00:36:07,581 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 415 barrettMCW 'Fix reconnection issue' (user: barrettMCW) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 416 sbesson 'Parse omero.logging properties under new Logging heading' - PR 417 chris-allan 'Switch result logging to DEBUG level' - PR 418 chris-allan 'Allow a caller to ignore row numbers' Generated by OMERO-python-superbuild-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/110/)' 2024-07-05 00:36:07,589 [ scc.git] DEBUG [detached HEAD 8af035ca] merge master -Dorg -Ssuccess-only 2024-07-05 00:36:07,589 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-05 00:36:07,590 [ scc.git] INFO Overriding base-branch from master to develop 2024-07-05 00:36:07,590 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:36:08,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-07-05 00:36:08,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-07-05 00:36:09,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-07-05 00:36:09,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-07-05 00:36:10,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-07-05 00:36:10,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-07-05 00:36:10,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-07-05 00:36:11,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-07-05 00:36:11,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:36:12,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-07-05 00:36:12,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-07-05 00:36:12,785 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-07-05 00:36:13,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-07-05 00:36:13,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-07-05 00:36:14,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-07-05 00:36:14,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-07-05 00:36:14,708 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:36:14,708 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-07-05 00:36:14,709 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:36:14,709 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:14,714 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-07-05 00:36:14,718 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:36:14,719 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-07-05 00:36:14,723 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-07-05 00:36:14,727 [ scc.git] DEBUG Already up to date. 2024-07-05 00:36:14,727 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-07-05 00:36:15,164 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2024-07-05 00:36:15,164 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-07-05 00:36:15,170 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:36:15,170 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:36:15,170 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:15,175 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-05 00:36:15,180 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:15,184 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-05 00:36:15,193 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-07-05 00:36:15,194 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-07-05 00:36:15,194 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-05 00:36:15,194 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-05 00:36:15,198 [ scc.git] DEBUG Calling 'git reset --hard c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-07-05 00:36:15,203 [ scc.git] DEBUG HEAD is now at c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-07-05 00:36:15,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:36:15,368 [ scc.git] DEBUG Calling 'git merge-base c20d2734b711c659cecea83db6e2ebd7b7013636 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-05 00:36:15,375 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-07-05 00:36:15,379 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#110](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/110/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/110/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-07-05 00:36:15,383 [ scc.config] DEBUG Found github.token 2024-07-05 00:36:15,383 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-07-05 00:36:15,383 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:36:15,418 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:36:15,419 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:15,423 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:36:15,458 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:36:15,464 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9a31341d60> has no local changes 2024-07-05 00:36:15,464 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/110/)' 2024-07-05 00:36:15,470 [ scc.git] DEBUG [detached HEAD c3ab939] merge master -Dorg -Ssuccess-only 2024-07-05 00:36:15,471 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-05 00:36:15,471 [ scc.repo] DEBUG ## PRs found: 2024-07-05 00:36:16,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2024-07-05 00:36:16,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/564 HTTP/1.1" 200 None 2024-07-05 00:36:17,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/564/comments HTTP/1.1" 200 None 2024-07-05 00:36:17,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde HTTP/1.1" 200 None 2024-07-05 00:36:18,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:36:18,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:36:18,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde HTTP/1.1" 200 None 2024-07-05 00:36:19,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/091e5fc2d35212271ac71fd66b42c611299d6fde?per_page=1 HTTP/1.1" 200 None 2024-07-05 00:36:19,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde HTTP/1.1" 200 None 2024-07-05 00:36:20,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde/status HTTP/1.1" 200 None 2024-07-05 00:36:20,343 [ scc.repo] DEBUG - PR 564 knabar 'New table API endpoints for lower level table access' 2024-07-05 00:36:20,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/563 HTTP/1.1" 200 None 2024-07-05 00:36:21,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/563/comments HTTP/1.1" 200 None 2024-07-05 00:36:21,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7 HTTP/1.1" 200 None 2024-07-05 00:36:22,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:36:22,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:36:23,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7 HTTP/1.1" 200 None 2024-07-05 00:36:23,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/af88a0cd2aa7d15d9b0dca1ce369060284551de7?per_page=1 HTTP/1.1" 200 None 2024-07-05 00:36:24,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7 HTTP/1.1" 200 None 2024-07-05 00:36:24,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7/status HTTP/1.1" 200 None 2024-07-05 00:36:24,620 [ scc.repo] DEBUG - PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS' 2024-07-05 00:36:25,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/562 HTTP/1.1" 200 None 2024-07-05 00:36:25,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/560 HTTP/1.1" 200 None 2024-07-05 00:36:26,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/560/comments HTTP/1.1" 200 None 2024-07-05 00:36:26,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823 HTTP/1.1" 200 None 2024-07-05 00:36:27,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:36:27,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:36:28,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823 HTTP/1.1" 200 None 2024-07-05 00:36:28,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/f92a4e2764982ace46474a82af4ad25bee9d8823?per_page=1 HTTP/1.1" 200 None 2024-07-05 00:36:28,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823 HTTP/1.1" 200 None 2024-07-05 00:36:29,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823/status HTTP/1.1" 200 None 2024-07-05 00:36:29,343 [ scc.repo] DEBUG - PR 560 will-moore 'linkify supports urls that include $ character' 2024-07-05 00:36:29,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/558 HTTP/1.1" 200 None 2024-07-05 00:36:30,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None 2024-07-05 00:36:30,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:36:31,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:36:31,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None 2024-07-05 00:36:32,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/575f7bbc72aad997963937297f08156ca6f7dd5e?per_page=1 HTTP/1.1" 200 None 2024-07-05 00:36:32,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None 2024-07-05 00:36:33,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/status HTTP/1.1" 200 None 2024-07-05 00:36:33,011 [ scc.repo] DEBUG - PR 558 jburel 'Update readme' 2024-07-05 00:36:33,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555 HTTP/1.1" 200 None 2024-07-05 00:36:33,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555/comments HTTP/1.1" 200 None 2024-07-05 00:36:34,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None 2024-07-05 00:36:34,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:36:35,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:36:35,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None 2024-07-05 00:36:36,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/97e479b717e34179eceea2507d3e69a04b2fec1e?per_page=1 HTTP/1.1" 200 None 2024-07-05 00:36:36,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None 2024-07-05 00:36:37,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/status HTTP/1.1" 200 None 2024-07-05 00:36:37,291 [ scc.repo] DEBUG - PR 555 chris-allan 'Archive status' 2024-07-05 00:36:37,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/554 HTTP/1.1" 200 None 2024-07-05 00:36:38,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/554/comments HTTP/1.1" 200 None 2024-07-05 00:36:38,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b9cd4921b058c60151dcca3fc9ee7b1a91e7bf0b HTTP/1.1" 200 None 2024-07-05 00:36:39,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b9cd4921b058c60151dcca3fc9ee7b1a91e7bf0b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:36:39,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b9cd4921b058c60151dcca3fc9ee7b1a91e7bf0b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:36:40,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b9cd4921b058c60151dcca3fc9ee7b1a91e7bf0b HTTP/1.1" 200 None 2024-07-05 00:36:40,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b9cd4921b058c60151dcca3fc9ee7b1a91e7bf0b?per_page=1 HTTP/1.1" 200 None 2024-07-05 00:36:41,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b9cd4921b058c60151dcca3fc9ee7b1a91e7bf0b HTTP/1.1" 200 None 2024-07-05 00:36:41,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b9cd4921b058c60151dcca3fc9ee7b1a91e7bf0b/status HTTP/1.1" 200 None 2024-07-05 00:36:41,509 [ scc.repo] DEBUG - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' 2024-07-05 00:36:41,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2024-07-05 00:36:42,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2024-07-05 00:36:42,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2024-07-05 00:36:43,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2024-07-05 00:36:43,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-07-05 00:36:44,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:36:44,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:36:45,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-07-05 00:36:45,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None 2024-07-05 00:36:46,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-07-05 00:36:46,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None 2024-07-05 00:36:46,639 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-07-05 00:36:47,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2024-07-05 00:36:47,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2024-07-05 00:36:48,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-07-05 00:36:48,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:36:49,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:36:49,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-07-05 00:36:49,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None 2024-07-05 00:36:50,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-07-05 00:36:50,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None 2024-07-05 00:36:50,897 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2024-07-05 00:36:51,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2024-07-05 00:36:51,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2024-07-05 00:36:52,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2024-07-05 00:36:52,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-05 00:36:53,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-05 00:36:53,331 [ scc.repo] DEBUG ## Branches found: 2024-07-05 00:36:53,331 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-07-05 00:36:53,332 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:36:53,332 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:53,339 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-05 00:36:53,343 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-05 00:36:53,344 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-05 00:36:53,365 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-05 00:36:53,371 [ scc.git] DEBUG Already up to date. 2024-07-05 00:36:53,371 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2024-07-05 00:36:54,081 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-05 00:36:54,082 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2024-07-05 00:36:54,088 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2024-07-05 00:36:54,546 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-05 00:36:54,546 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2024-07-05 00:36:54,553 [ scc.git] DEBUG Calling 'git fetch origin pull/554/head' 2024-07-05 00:36:54,883 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-05 00:36:54,883 [ scc.git] DEBUG * branch refs/pull/554/head -> FETCH_HEAD 2024-07-05 00:36:54,889 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-07-05 00:36:55,228 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-05 00:36:55,228 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-07-05 00:36:55,233 [ scc.git] DEBUG Calling 'git fetch origin pull/558/head' 2024-07-05 00:36:55,584 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-05 00:36:55,585 [ scc.git] DEBUG * branch refs/pull/558/head -> FETCH_HEAD 2024-07-05 00:36:55,589 [ scc.git] DEBUG Calling 'git fetch origin pull/560/head' 2024-07-05 00:36:56,014 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-05 00:36:56,014 [ scc.git] DEBUG * branch refs/pull/560/head -> FETCH_HEAD 2024-07-05 00:36:56,019 [ scc.git] DEBUG Calling 'git fetch origin pull/563/head' 2024-07-05 00:36:56,376 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-05 00:36:56,376 [ scc.git] DEBUG * branch refs/pull/563/head -> FETCH_HEAD 2024-07-05 00:36:56,383 [ scc.git] DEBUG Calling 'git fetch origin pull/564/head' 2024-07-05 00:36:56,882 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-05 00:36:56,882 [ scc.git] DEBUG * branch refs/pull/564/head -> FETCH_HEAD 2024-07-05 00:36:56,887 [ scc.git] DEBUG ## Unique users: [] 2024-07-05 00:36:56,887 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:36:56,887 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:56,891 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-07-05 00:36:56,898 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:56,903 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-07-05 00:36:56,986 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2024-07-05 00:36:56,986 [ scc.git] DEBUG Auto-merging setup.py 2024-07-05 00:36:56,988 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:36:56,992 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2024-07-05 00:36:56,992 [ scc.git] DEBUG setup.py | 1 + 2024-07-05 00:36:56,992 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2024-07-05 00:36:57,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:36:57,149 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-07-05 00:36:57,156 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:57,160 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-07-05 00:36:57,257 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2024-07-05 00:36:57,257 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-07-05 00:36:57,258 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:36:57,262 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2024-07-05 00:36:57,262 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2024-07-05 00:36:57,262 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2024-07-05 00:36:57,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:36:57,555 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b9cd4921b058c60151dcca3fc9ee7b1a91e7bf0b' 2024-07-05 00:36:57,567 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:57,575 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 554 (Optimize obj_id_bitmask by using its own query) b9cd4921b058c60151dcca3fc9ee7b1a91e7bf0b' 2024-07-05 00:36:57,649 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:36:57,653 [ scc.git] DEBUG omeroweb/webgateway/views.py | 66 +++++++++++++++++++++++--------------------- 2024-07-05 00:36:57,654 [ scc.git] DEBUG test/unit/test_webgateway.py | 9 ++++-- 2024-07-05 00:36:57,654 [ scc.git] DEBUG 2 files changed, 40 insertions(+), 35 deletions(-) 2024-07-05 00:36:57,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:36:57,958 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...97e479b717e34179eceea2507d3e69a04b2fec1e' 2024-07-05 00:36:57,969 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:57,975 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Archive status) 97e479b717e34179eceea2507d3e69a04b2fec1e' 2024-07-05 00:36:58,124 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-07-05 00:36:58,125 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:36:58,130 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.tree.js | 3 +++ 2024-07-05 00:36:58,131 [ scc.git] DEBUG .../webclient/annotations/includes/core_metadata.html | 6 ++++++ 2024-07-05 00:36:58,131 [ scc.git] DEBUG omeroweb/webclient/tree.py | 10 ++++++++-- 2024-07-05 00:36:58,131 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 1 + 2024-07-05 00:36:58,131 [ scc.git] DEBUG 4 files changed, 18 insertions(+), 2 deletions(-) 2024-07-05 00:36:58,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:36:58,357 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...575f7bbc72aad997963937297f08156ca6f7dd5e' 2024-07-05 00:36:58,366 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:58,372 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 558 (Update readme) 575f7bbc72aad997963937297f08156ca6f7dd5e' 2024-07-05 00:36:58,416 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:36:58,419 [ scc.git] DEBUG README.rst | 42 +++++++++++++++++++++--------------------- 2024-07-05 00:36:58,419 [ scc.git] DEBUG 1 file changed, 21 insertions(+), 21 deletions(-) 2024-07-05 00:36:58,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:36:58,770 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f92a4e2764982ace46474a82af4ad25bee9d8823' 2024-07-05 00:36:58,779 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:58,784 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 560 (linkify supports urls that include $ character) f92a4e2764982ace46474a82af4ad25bee9d8823' 2024-07-05 00:36:58,871 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:36:58,875 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2024-07-05 00:36:58,875 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-07-05 00:36:59,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:36:59,189 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...af88a0cd2aa7d15d9b0dca1ce369060284551de7' 2024-07-05 00:36:59,200 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:59,204 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 563 (Batch by MAX_TABLE_DOWNLOAD_ROWS) af88a0cd2aa7d15d9b0dca1ce369060284551de7' 2024-07-05 00:36:59,294 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py 2024-07-05 00:36:59,295 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:36:59,300 [ scc.git] DEBUG omeroweb/webgateway/views.py | 2 +- 2024-07-05 00:36:59,300 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-07-05 00:36:59,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:36:59,610 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...091e5fc2d35212271ac71fd66b42c611299d6fde' 2024-07-05 00:36:59,619 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:36:59,624 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 564 (New table API endpoints for lower level table access) 091e5fc2d35212271ac71fd66b42c611299d6fde' 2024-07-05 00:36:59,671 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2024-07-05 00:36:59,671 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py 2024-07-05 00:36:59,672 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-05 00:36:59,678 [ scc.git] DEBUG omeroweb/settings.py | 7 ++ 2024-07-05 00:36:59,678 [ scc.git] DEBUG omeroweb/webgateway/urls.py | 29 +++++++ 2024-07-05 00:36:59,678 [ scc.git] DEBUG omeroweb/webgateway/views.py | 175 ++++++++++++++++++++++++++++++++++++++++++- 2024-07-05 00:36:59,678 [ scc.git] DEBUG 3 files changed, 210 insertions(+), 1 deletion(-) 2024-07-05 00:37:00,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:37:00,045 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-05 00:37:00,091 [ scc.git] DEBUG Get sha1 of %s 2024-07-05 00:37:00,091 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-05 00:37:00,096 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:37:00,140 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:37:00,153 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9a302934f0> has no local changes 2024-07-05 00:37:00,153 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 562 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' - PR 555 chris-allan 'Archive status' - PR 558 jburel 'Update readme' - PR 560 will-moore 'linkify supports urls that include $ character' - PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS' - PR 564 knabar 'New table API endpoints for lower level table access' Generated by OMERO-python-superbuild-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/110/)' 2024-07-05 00:37:00,165 [ scc.git] DEBUG [detached HEAD 8dd91dd66] merge master -Dorg -Ssuccess-only 2024-07-05 00:37:00,166 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-05 00:37:00,166 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-05 00:37:00,229 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2024-07-05 00:37:00,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:37:00,466 [ scc.config] DEBUG Found submodule.omero-marshal.url 2024-07-05 00:37:00,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:37:00,877 [ scc.config] DEBUG Found submodule.omero-py.url 2024-07-05 00:37:01,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:37:01,291 [ scc.config] DEBUG Found submodule.omero-scripts.url 2024-07-05 00:37:01,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:37:01,712 [ scc.config] DEBUG Found submodule.omero-web.url 2024-07-05 00:37:02,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-05 00:37:02,123 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-05 00:37:02,157 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9a323ffd60> has local changes 2024-07-05 00:37:02,157 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 415 barrettMCW 'Fix reconnection issue' (user: barrettMCW) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 416 sbesson 'Parse omero.logging properties under new Logging heading' - PR 417 chris-allan 'Switch result logging to DEBUG level' - PR 418 chris-allan 'Allow a caller to ignore row numbers' Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 562 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' - PR 555 chris-allan 'Archive status' - PR 558 jburel 'Update readme' - PR 560 will-moore 'linkify supports urls that include $ character' - PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS' - PR 564 knabar 'New table API endpoints for lower level table access' Generated by OMERO-python-superbuild-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/110/)' 2024-07-05 00:37:02,168 [ scc.git] DEBUG [detached HEAD c5ee51b] merge master -Dorg -Ssuccess-only 2024-07-05 00:37:02,169 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-07-05 00:37:02,169 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2024-07-05 00:37:02,169 [ scc.merge] INFO Already up to date. 2024-07-05 00:37:02,169 [ scc.merge] INFO 2024-07-05 00:37:02,169 [ scc.merge] INFO 2024-07-05 00:37:02,169 [ scc.merge] INFO Repository: ome/omero-dropbox 2024-07-05 00:37:02,169 [ scc.merge] INFO Already up to date. 2024-07-05 00:37:02,169 [ scc.merge] INFO 2024-07-05 00:37:02,169 [ scc.merge] INFO Merged PRs: 2024-07-05 00:37:02,169 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-07-05 00:37:02,169 [ scc.merge] INFO 2024-07-05 00:37:02,169 [ scc.merge] INFO Repository: ome/omero-marshal 2024-07-05 00:37:02,169 [ scc.merge] INFO Excluded PRs: 2024-07-05 00:37:02,169 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2024-07-05 00:37:02,169 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2024-07-05 00:37:02,169 [ scc.merge] INFO Already up to date. 2024-07-05 00:37:02,169 [ scc.merge] INFO 2024-07-05 00:37:02,169 [ scc.merge] INFO Merged PRs: 2024-07-05 00:37:02,169 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2024-07-05 00:37:02,169 [ scc.merge] INFO 2024-07-05 00:37:02,170 [ scc.merge] INFO Repository: ome/omero-py 2024-07-05 00:37:02,170 [ scc.merge] INFO Excluded PRs: 2024-07-05 00:37:02,170 [ scc.merge] INFO - PR 415 barrettMCW 'Fix reconnection issue' (user: barrettMCW) 2024-07-05 00:37:02,170 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2024-07-05 00:37:02,170 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude) 2024-07-05 00:37:02,170 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) 2024-07-05 00:37:02,170 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) 2024-07-05 00:37:02,170 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) 2024-07-05 00:37:02,170 [ scc.merge] INFO Already up to date. 2024-07-05 00:37:02,170 [ scc.merge] INFO 2024-07-05 00:37:02,170 [ scc.merge] INFO Merged PRs: 2024-07-05 00:37:02,170 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2024-07-05 00:37:02,170 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error' 2024-07-05 00:37:02,170 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-07-05 00:37:02,170 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' 2024-07-05 00:37:02,170 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2024-07-05 00:37:02,170 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-07-05 00:37:02,170 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2024-07-05 00:37:02,170 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2024-07-05 00:37:02,170 [ scc.merge] INFO - PR 416 sbesson 'Parse omero.logging properties under new Logging heading' 2024-07-05 00:37:02,170 [ scc.merge] INFO - PR 417 chris-allan 'Switch result logging to DEBUG level' 2024-07-05 00:37:02,170 [ scc.merge] INFO - PR 418 chris-allan 'Allow a caller to ignore row numbers' 2024-07-05 00:37:02,170 [ scc.merge] INFO 2024-07-05 00:37:02,170 [ scc.merge] INFO Repository: ome/omero-scripts 2024-07-05 00:37:02,170 [ scc.merge] INFO Excluded PRs: 2024-07-05 00:37:02,170 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-07-05 00:37:02,170 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-07-05 00:37:02,170 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-07-05 00:37:02,170 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-07-05 00:37:02,170 [ scc.merge] INFO Already up to date. 2024-07-05 00:37:02,170 [ scc.merge] INFO 2024-07-05 00:37:02,170 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-05 00:37:02,170 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-07-05 00:37:02,170 [ scc.merge] INFO 2024-07-05 00:37:02,170 [ scc.merge] INFO Repository: ome/omero-web 2024-07-05 00:37:02,170 [ scc.merge] INFO Excluded PRs: 2024-07-05 00:37:02,170 [ scc.merge] INFO - PR 562 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-07-05 00:37:02,170 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2024-07-05 00:37:02,171 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2024-07-05 00:37:02,171 [ scc.merge] INFO Already up to date. 2024-07-05 00:37:02,171 [ scc.merge] INFO 2024-07-05 00:37:02,171 [ scc.merge] INFO Merged PRs: 2024-07-05 00:37:02,171 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2024-07-05 00:37:02,171 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-07-05 00:37:02,171 [ scc.merge] INFO - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' 2024-07-05 00:37:02,171 [ scc.merge] INFO - PR 555 chris-allan 'Archive status' 2024-07-05 00:37:02,171 [ scc.merge] INFO - PR 558 jburel 'Update readme' 2024-07-05 00:37:02,171 [ scc.merge] INFO - PR 560 will-moore 'linkify supports urls that include $ character' 2024-07-05 00:37:02,171 [ scc.merge] INFO - PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS' 2024-07-05 00:37:02,171 [ scc.merge] INFO - PR 564 knabar 'New table API endpoints for lower level table access' 2024-07-05 00:37:02,171 [ scc.merge] INFO 2024-07-05 00:37:02,171 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-07-05 00:37:02,171 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:37:02,177 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-07-05 00:37:02,177 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:37:02,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-05 00:37:02,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-07-05 00:37:02,183 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:37:02,189 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-05 00:37:02,189 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-07-05 00:37:02,189 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:37:02,195 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-05 00:37:02,196 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-07-05 00:37:02,196 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:37:02,201 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-05 00:37:02,202 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-07-05 00:37:02,202 [ scc.git] DEBUG Calling 'git remote' 2024-07-05 00:37:02,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from a4307f4 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from cca4c2f nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 8d8108de nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from c20d273 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 5a2cd79d7 nothing to commit, working tree clean HEAD detached from 46d23a1 nothing to commit, working tree clean 2024-07-05 00:37:36,163 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS