Started by upstream project "Trigger" build number 146 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@pip-fix Attempting to resolve pip-fix from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/pwalczysko/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/pip-fix revision 7f97700354c96f09f8fc85e1e5b29d5f1bc56eef Selected Git installation does not exist. Using Default The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/c2fa22709d21f4bfd9941790ca08af5c59149c9caf5c1a8a7319c933eafe9bde/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/pwalczysko/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/pwalczysko/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/pwalczysko/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 7f97700354c96f09f8fc85e1e5b29d5f1bc56eef (pip-fix) > git config core.sparsecheckout # timeout=10 > git checkout -f 7f97700354c96f09f8fc85e1e5b29d5f1bc56eef # timeout=10 Commit message: "Fix pip-install" > git rev-list --no-walk 7f97700354c96f09f8fc85e1e5b29d5f1bc56eef # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.52.0' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision b68c3cf06205611a43f501104408df0df16649d6 (refs/remotes/origin/master) Commit message: "Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c" > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b68c3cf06205611a43f501104408df0df16649d6 # timeout=10 > git rev-list --no-walk b68c3cf06205611a43f501104408df0df16649d6 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 124 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + tar -zxf - + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + popd ~/workspace/OMERO-python-superbuild-push + python3.11 -m venv build/venv > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python -m pip install 'pip @ https://files.pythonhosted.org/packages/3f/06/3e4420302363fbb71be3c7f35ce042f54bfca330e3e66b3a2e3c4cca579f/pip-26.2.2-py3-none-any.whl#sha256=fd7f4dfa8190e014013b9f08f3e973f4e4c26ffd179a204895533a7254813a70' Collecting pip@ https://files.pythonhosted.org/packages/3f/06/3e4420302363fbb71be3c7f35ce042f54bfca330e3e66b3a2e3c4cca579f/pip-26.2.2-py3-none-any.whl#sha256=fd7f4dfa8190e014013b9f08f3e973f4e4c26ffd179a204895533a7254813a70 Using cached pip-26.2.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 24.0 Uninstalling pip-24.0: Successfully uninstalled pip-24.0 Successfully installed pip-26.2.2 [notice] A new release of pip is available: 26.2.2 -> 26.3 [notice] To update, run: pip install --upgrade pip + python -m pip install --upgrade certifi Collecting certifi Using cached certifi-2026.10.23-py3-none-any.whl.metadata (2.5 kB) Using cached certifi-2026.10.23-py3-none-any.whl (135 kB) Installing collected packages: certifi Successfully installed certifi-2026.10.23 [notice] A new release of pip is available: 26.2.2 -> 26.3 [notice] To update, run: pip install --upgrade pip + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.10.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.34.2-py3-none-any.whl.metadata (4.8 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.15.1-py3-none-any.whl.metadata (3.5 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.16.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-50.0.2-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (4.4 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.1.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.5 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.12-py3-none-any.whl.metadata (9.7 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.5.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (46 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.20-py3-none-any.whl.metadata (7.2 kB) Requirement already satisfied: certifi>=2023.5.7 in ./build/venv/lib/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (2026.10.23) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.10.0-py3-none-any.whl (455 kB) Using cached pyjwt-2.15.1-py3-none-any.whl (33 kB) Using cached cryptography-50.0.2-cp311-abi3-manylinux_2_34_x86_64.whl (4.8 MB) Using cached cffi-2.1.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (217 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.34.2-py3-none-any.whl (73 kB) Using cached charset_normalizer-3.5.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (269 kB) Using cached idna-3.20-py3-none-any.whl (69 kB) Using cached typing_extensions-4.16.0-py3-none-any.whl (45 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.12-py3-none-any.whl (62 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.10.0 PyYAML-6.0.3 cffi-2.1.1 charset_normalizer-3.5.2 cryptography-50.0.2 future-1.0.0 idna-3.20 pycparser-3.12 pyjwt-2.15.1 pynacl-1.6.2 requests-2.34.2 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.16.0 urllib3-1.26.20 yaclifw-0.2.0 [notice] A new release of pip is available: 26.2.2 -> 26.3 [notice] To update, run: pip install --upgrade pip [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-11-11 23:58:04,439 [ scc.config] DEBUG Found github.token 2026-11-11 23:58:04,440 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-11-11 23:58:04,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-11 23:58:05,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-11 23:58:05,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-11-11 23:58:05,624 [ scc.gh] DEBUG 4974 remaining from 5000 (Reset at 00:11 2026-11-11 23:58:05,625 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-11-11 23:58:05,634 [ scc.git] DEBUG Check current status 2026-11-11 23:58:05,634 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-11-11 23:58:05,650 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c 2026-11-11 23:58:05,651 [ scc.git] DEBUG Calling 'git submodule status' 2026-11-11 23:58:05,779 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2026-11-11 23:58:05,821 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2026-11-11 23:58:05,897 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5) 2026-11-11 23:58:05,957 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2026-11-11 23:58:06,033 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2026-11-11 23:58:06,042 [ scc.config] DEBUG Found remote.origin.url 2026-11-11 23:58:06,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2026-11-11 23:58:06,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-11-11 23:58:07,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-11-11 23:58:07,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-11-11 23:58:08,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-11-11 23:58:08,365 [ scc.git] DEBUG Resetting... 2026-11-11 23:58:08,366 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-11-11 23:58:08,516 [ scc.git] DEBUG HEAD is now at b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c 2026-11-11 23:58:08,517 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-11-11 23:58:08,884 [ scc.git] DEBUG Check current status 2026-11-11 23:58:08,884 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-11-11 23:58:08,900 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c 2026-11-11 23:58:08,901 [ scc.git] DEBUG Calling 'git submodule status' 2026-11-11 23:58:09,032 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2026-11-11 23:58:09,064 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2026-11-11 23:58:09,116 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5) 2026-11-11 23:58:09,151 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2026-11-11 23:58:09,193 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2026-11-11 23:58:09,194 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-11-11 23:58:09,194 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-11-11 23:58:09,195 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-11-11 23:58:09,195 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-11-11 23:58:09,195 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-11-11 23:58:09,195 [ scc.repo] DEBUG ## PRs found: 2026-11-11 23:58:09,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2026-11-11 23:58:10,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None 2026-11-11 23:58:10,119 [ scc.repo] DEBUG # ... Include label: dependencies 2026-11-11 23:58:10,120 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`' 2026-11-11 23:58:10,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None 2026-11-11 23:58:10,720 [ scc.repo] DEBUG # ... Include label: dependencies 2026-11-11 23:58:10,720 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`' 2026-11-11 23:58:11,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None 2026-11-11 23:58:11,259 [ scc.repo] DEBUG # ... Include label: dependencies 2026-11-11 23:58:11,259 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`' 2026-11-11 23:58:11,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None 2026-11-11 23:58:11,778 [ scc.repo] DEBUG # ... Include label: dependencies 2026-11-11 23:58:11,779 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`' 2026-11-11 23:58:11,779 [ scc.repo] DEBUG ## Branches found: 2026-11-11 23:58:11,779 [ scc.git] DEBUG Get sha1 of %s 2026-11-11 23:58:11,779 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:58:11,788 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-11-11 23:58:11,802 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-11-11 23:58:11,802 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-11-11 23:58:11,817 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-11-11 23:58:11,856 [ scc.git] DEBUG Already up to date. 2026-11-11 23:58:11,856 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head' 2026-11-11 23:58:12,243 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2026-11-11 23:58:12,243 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD 2026-11-11 23:58:12,266 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head' 2026-11-11 23:58:12,661 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2026-11-11 23:58:12,661 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD 2026-11-11 23:58:12,684 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head' 2026-11-11 23:58:13,106 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2026-11-11 23:58:13,106 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD 2026-11-11 23:58:13,127 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head' 2026-11-11 23:58:13,511 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2026-11-11 23:58:13,512 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD 2026-11-11 23:58:13,534 [ scc.git] DEBUG ## Unique users: [] 2026-11-11 23:58:13,534 [ scc.git] DEBUG Get sha1 of %s 2026-11-11 23:58:13,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:58:13,546 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c' 2026-11-11 23:58:13,569 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:58:13,578 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c' 2026-11-11 23:58:13,793 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-11-11 23:58:13,841 [ scc.git] DEBUG omero-marshal | 2 +- 2026-11-11 23:58:13,841 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-11-11 23:58:14,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-11 23:58:14,038 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa' 2026-11-11 23:58:14,062 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:58:14,071 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa' 2026-11-11 23:58:14,330 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-11-11 23:58:14,376 [ scc.git] DEBUG omero-web | 2 +- 2026-11-11 23:58:14,376 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-11-11 23:58:14,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-11 23:58:14,587 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf' 2026-11-11 23:58:14,609 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:58:14,617 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf' 2026-11-11 23:58:14,884 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-11-11 23:58:14,930 [ scc.git] DEBUG omero-dropbox | 2 +- 2026-11-11 23:58:14,930 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-11-11 23:58:15,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-11 23:58:15,125 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d' 2026-11-11 23:58:15,151 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:58:15,159 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d' 2026-11-11 23:58:15,401 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-11-11 23:58:15,452 [ scc.git] DEBUG omero-py | 2 +- 2026-11-11 23:58:15,452 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-11-11 23:58:15,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-11 23:58:15,655 [ scc.git] DEBUG Calling 'git submodule update' 2026-11-11 23:58:15,936 [ scc.git] DEBUG Submodule path 'omero-dropbox': checked out 'ac93ed4b4a139dd73b414ead55223071fc465de5' 2026-11-11 23:58:16,171 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c' 2026-11-11 23:58:16,600 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1' 2026-11-11 23:58:17,325 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b' 2026-11-11 23:58:17,326 [ scc.git] DEBUG Get sha1 of %s 2026-11-11 23:58:17,326 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:58:17,342 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-11-11 23:58:18,106 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0e5bd3d5d0> has no local changes 2026-11-11 23:58:18,106 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`' - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`' - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`' - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`' Generated by OMERO-python-superbuild-push#113 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/113/)' 2026-11-11 23:58:18,471 [ scc.git] DEBUG [detached HEAD 1e6dbad] merge master -Dorg -Snone 2026-11-11 23:58:18,472 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2026-11-11 23:58:18,472 [ scc.merge] INFO Already up to date. 2026-11-11 23:58:18,472 [ scc.merge] INFO 2026-11-11 23:58:18,472 [ scc.merge] INFO Merged PRs: 2026-11-11 23:58:18,472 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`' 2026-11-11 23:58:18,472 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`' 2026-11-11 23:58:18,472 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`' 2026-11-11 23:58:18,472 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`' 2026-11-11 23:58:18,472 [ scc.merge] INFO 2026-11-11 23:58:18,472 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-11-11 23:58:18,473 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Submodule path 'omero-marshal': checked out 'f8ff1c2e439f0599d96423b7f64898864548ba9f' Submodule path 'omero-py': checked out '8990768db971d03ea5dafabc177aab910f567c68' Submodule path 'omero-scripts': checked out '636540edd446910373ee2f91100356497e205722' Submodule path 'omero-web': checked out 'e19117680c1d814c7f196190dd0cd3d45fbc0ca6' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2026-11-11 23:58:24,437 [ scc.config] DEBUG Found github.token 2026-11-11 23:58:24,438 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-11-11 23:58:24,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-11 23:58:25,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-11 23:58:25,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-11-11 23:58:25,611 [ scc.gh] DEBUG 4958 remaining from 5000 (Reset at 00:11 2026-11-11 23:58:25,611 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-11-11 23:58:25,622 [ scc.git] DEBUG Check current status 2026-11-11 23:58:25,622 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-11-11 23:58:25,638 [ scc.git] DEBUG 1e6dbad merge master -Dorg -Snone 2026-11-11 23:58:25,638 [ scc.git] DEBUG Calling 'git submodule status' 2026-11-11 23:58:25,759 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4) 2026-11-11 23:58:25,786 [ scc.git] DEBUG +f8ff1c2e439f0599d96423b7f64898864548ba9f omero-marshal (v0.9.1-3-gf8ff1c2) 2026-11-11 23:58:25,838 [ scc.git] DEBUG +8990768db971d03ea5dafabc177aab910f567c68 omero-py (v5.23.0-37-g8990768d) 2026-11-11 23:58:25,880 [ scc.git] DEBUG +636540edd446910373ee2f91100356497e205722 omero-scripts (v5.10.0-14-g636540e) 2026-11-11 23:58:25,917 [ scc.git] DEBUG +e19117680c1d814c7f196190dd0cd3d45fbc0ca6 omero-web (v5.33.3-1-ge19117680) 2026-11-11 23:58:25,928 [ scc.config] DEBUG Found remote.origin.url 2026-11-11 23:58:25,928 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-11-11 23:58:25,930 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2026-11-11 23:58:26,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2026-11-11 23:58:26,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-11-11 23:58:27,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-11-11 23:58:27,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-11-11 23:58:28,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-11-11 23:58:28,266 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-11-11 23:58:28,375 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2026-11-11 23:58:28,375 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-11-11 23:58:28,384 [ scc.git] DEBUG Check current status 2026-11-11 23:58:28,384 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-11-11 23:58:28,398 [ scc.git] DEBUG ac93ed4 Merge pull request #26 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 2026-11-11 23:58:28,399 [ scc.git] DEBUG Calling 'git submodule status' 2026-11-11 23:58:28,498 [ scc.config] DEBUG Found remote.origin.url 2026-11-11 23:58:28,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2026-11-11 23:58:29,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-11-11 23:58:29,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-11-11 23:58:30,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-11-11 23:58:30,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-11-11 23:58:30,805 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-11-11 23:58:30,898 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-11-11 23:58:30,899 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2026-11-11 23:58:30,899 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-11-11 23:58:30,908 [ scc.git] DEBUG Check current status 2026-11-11 23:58:30,908 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-11-11 23:58:30,923 [ scc.git] DEBUG f8ff1c2 Merge pull request #90 from sbesson/python_3.9_removal 2026-11-11 23:58:30,924 [ scc.git] DEBUG Calling 'git submodule status' 2026-11-11 23:58:31,021 [ scc.config] DEBUG Found remote.origin.url 2026-11-11 23:58:31,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2026-11-11 23:58:31,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-11-11 23:58:32,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-11-11 23:58:32,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-11-11 23:58:33,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-11-11 23:58:33,351 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-11-11 23:58:33,448 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-11-11 23:58:33,449 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2026-11-11 23:58:33,449 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-11-11 23:58:33,458 [ scc.git] DEBUG Check current status 2026-11-11 23:58:33,458 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-11-11 23:58:33,481 [ scc.git] DEBUG 8990768d Merge pull request #489 from will-moore/getObjects_Annotations 2026-11-11 23:58:33,484 [ scc.git] DEBUG Calling 'git submodule status' 2026-11-11 23:58:33,585 [ scc.config] DEBUG Found remote.origin.url 2026-11-11 23:58:33,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2026-11-11 23:58:34,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-11-11 23:58:34,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-11-11 23:58:35,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-11-11 23:58:35,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-11-11 23:58:35,818 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-11-11 23:58:35,930 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-11-11 23:58:35,930 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2026-11-11 23:58:35,930 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-11-11 23:58:35,951 [ scc.git] DEBUG Check current status 2026-11-11 23:58:35,951 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-11-11 23:58:35,972 [ scc.git] DEBUG 636540e Merge pull request #235 from will-moore/batch_roi_export_tags 2026-11-11 23:58:35,972 [ scc.git] DEBUG Calling 'git submodule status' 2026-11-11 23:58:36,075 [ scc.config] DEBUG Found remote.origin.url 2026-11-11 23:58:36,075 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-11-11 23:58:36,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2026-11-11 23:58:36,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-11-11 23:58:37,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-11-11 23:58:37,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-11-11 23:58:38,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-11-11 23:58:38,389 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-11-11 23:58:38,484 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-11-11 23:58:38,485 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2026-11-11 23:58:38,485 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-11-11 23:58:38,495 [ scc.git] DEBUG Check current status 2026-11-11 23:58:38,495 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-11-11 23:58:38,535 [ scc.git] DEBUG e19117680 Bump version: 5.33.3 → 5.33.4.dev0 2026-11-11 23:58:38,536 [ scc.git] DEBUG Calling 'git submodule status' 2026-11-11 23:58:38,644 [ scc.config] DEBUG Found remote.origin.url 2026-11-11 23:58:38,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2026-11-11 23:58:39,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-11-11 23:58:39,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-11-11 23:58:40,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-11-11 23:58:40,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-11-11 23:58:40,906 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-11-11 23:58:41,001 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-11-11 23:58:41,001 [ scc.git] DEBUG Resetting... 2026-11-11 23:58:41,001 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-11-11 23:58:41,122 [ scc.git] DEBUG HEAD is now at 1e6dbad merge master -Dorg -Snone 2026-11-11 23:58:41,123 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-11-11 23:58:41,471 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c' 2026-11-11 23:58:41,933 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1' 2026-11-11 23:58:42,234 [ scc.git] DEBUG Submodule path 'omero-scripts': checked out '03b9116196e1a799dd18a666559613d912be01a5' 2026-11-11 23:58:43,203 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b' 2026-11-11 23:58:43,226 [ scc.git] DEBUG Check current status 2026-11-11 23:58:43,227 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-11-11 23:58:43,241 [ scc.git] DEBUG 1e6dbad merge master -Dorg -Snone 2026-11-11 23:58:43,242 [ scc.git] DEBUG Calling 'git submodule status' 2026-11-11 23:58:43,363 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4) 2026-11-11 23:58:43,388 [ scc.git] DEBUG a3dd99b825ad44c9beadc38a8ae8ba94a155f62c omero-marshal (v0.9.0-18-ga3dd99b) 2026-11-11 23:58:43,427 [ scc.git] DEBUG b44120b5235b24db6dde315369ea1519bbeb30c1 omero-py (v5.21.2-3-gb44120b5) 2026-11-11 23:58:43,456 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2026-11-11 23:58:43,494 [ scc.git] DEBUG 675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b omero-web (v5.29.3-1-g675d57fd7) 2026-11-11 23:58:43,495 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-11-11 23:58:43,495 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-11-11 23:58:43,495 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-11-11 23:58:43,495 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-11-11 23:58:43,495 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-11-11 23:58:43,495 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-11-11 23:58:43,495 [ scc.repo] DEBUG ## PRs found: 2026-11-11 23:58:43,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2026-11-11 23:58:44,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None 2026-11-11 23:58:44,347 [ scc.repo] DEBUG # ... Include label: dependencies 2026-11-11 23:58:45,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None 2026-11-11 23:58:45,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-11-11 23:58:46,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None 2026-11-11 23:58:46,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?per_page=1 HTTP/1.1" 200 2 2026-11-11 23:58:46,547 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`' 2026-11-11 23:58:47,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None 2026-11-11 23:58:47,103 [ scc.repo] DEBUG # ... Include label: dependencies 2026-11-11 23:58:47,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None 2026-11-11 23:58:48,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-11-11 23:58:48,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None 2026-11-11 23:58:49,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/09050892c054f3697fd3604d05ce68b65af6dedf?per_page=1 HTTP/1.1" 200 2 2026-11-11 23:58:49,314 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`' 2026-11-11 23:58:49,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None 2026-11-11 23:58:49,879 [ scc.repo] DEBUG # ... Include label: dependencies 2026-11-11 23:58:50,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None 2026-11-11 23:58:50,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-11-11 23:58:51,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None 2026-11-11 23:58:51,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/7632acc02b92ba91ed954701ac52de2732a56daa?per_page=1 HTTP/1.1" 200 2 2026-11-11 23:58:51,948 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`' 2026-11-11 23:58:52,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None 2026-11-11 23:58:52,508 [ scc.repo] DEBUG # ... Include label: dependencies 2026-11-11 23:58:53,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None 2026-11-11 23:58:53,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-11-11 23:58:54,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None 2026-11-11 23:58:54,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/e5077065e3781e634471b4828f120f18c16dad1c?per_page=1 HTTP/1.1" 200 2 2026-11-11 23:58:54,620 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`' 2026-11-11 23:58:54,620 [ scc.repo] DEBUG ## Branches found: 2026-11-11 23:58:54,620 [ scc.git] DEBUG Get sha1 of %s 2026-11-11 23:58:54,620 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:58:54,630 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-11-11 23:58:54,642 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-11-11 23:58:54,642 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-11-11 23:58:54,661 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-11-11 23:58:54,702 [ scc.git] DEBUG Already up to date. 2026-11-11 23:58:54,702 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head' 2026-11-11 23:58:55,124 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2026-11-11 23:58:55,124 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD 2026-11-11 23:58:55,160 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head' 2026-11-11 23:58:55,592 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2026-11-11 23:58:55,592 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD 2026-11-11 23:58:55,612 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head' 2026-11-11 23:58:56,005 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2026-11-11 23:58:56,005 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD 2026-11-11 23:58:56,027 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head' 2026-11-11 23:58:56,450 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2026-11-11 23:58:56,450 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD 2026-11-11 23:58:56,472 [ scc.git] DEBUG ## Unique users: [] 2026-11-11 23:58:56,472 [ scc.git] DEBUG Get sha1 of %s 2026-11-11 23:58:56,472 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:58:56,481 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c' 2026-11-11 23:58:56,502 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:58:56,510 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c' 2026-11-11 23:58:56,549 [ scc.git] DEBUG Already up to date. 2026-11-11 23:58:56,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-11 23:58:56,739 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa' 2026-11-11 23:58:56,767 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:58:56,777 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa' 2026-11-11 23:58:56,819 [ scc.git] DEBUG Already up to date. 2026-11-11 23:58:57,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-11 23:58:57,219 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf' 2026-11-11 23:58:57,242 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:58:57,253 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf' 2026-11-11 23:58:57,297 [ scc.git] DEBUG Already up to date. 2026-11-11 23:58:57,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-11 23:58:57,658 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d' 2026-11-11 23:58:57,679 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:58:57,687 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d' 2026-11-11 23:58:57,733 [ scc.git] DEBUG Already up to date. 2026-11-11 23:58:58,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-11 23:58:58,176 [ scc.git] DEBUG Calling 'git submodule update' 2026-11-11 23:58:58,385 [ scc.git] DEBUG Get sha1 of %s 2026-11-11 23:58:58,385 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:58:58,393 [ scc.repo] DEBUG ## PRs found: 2026-11-11 23:58:58,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 2 2026-11-11 23:58:58,658 [ scc.repo] DEBUG ## Branches found: 2026-11-11 23:58:58,658 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2026-11-11 23:58:58,658 [ scc.git] DEBUG Get sha1 of %s 2026-11-11 23:58:58,658 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:58:58,671 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-11-11 23:58:58,684 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-11-11 23:58:58,684 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-11-11 23:58:58,701 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-11-11 23:58:58,746 [ scc.git] DEBUG Already up to date. 2026-11-11 23:58:58,747 [ scc.git] DEBUG ## Unique users: [] 2026-11-11 23:58:58,747 [ scc.git] DEBUG Get sha1 of %s 2026-11-11 23:58:58,747 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:58:58,760 [ scc.git] DEBUG Calling 'git submodule update' 2026-11-11 23:58:58,857 [ scc.git] DEBUG Get sha1 of %s 2026-11-11 23:58:58,857 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:58:58,868 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-11-11 23:58:58,960 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-11-11 23:58:59,005 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa511c2fc50> has no local changes 2026-11-11 23:58:59,005 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Generated by OMERO-python-superbuild-push#113 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/113/)' 2026-11-11 23:58:59,124 [ scc.git] DEBUG [detached HEAD 687d001] merge master -Dorg -Ssuccess-only 2026-11-11 23:58:59,126 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-11-11 23:58:59,126 [ scc.repo] DEBUG ## PRs found: 2026-11-11 23:58:59,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2026-11-11 23:59:00,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2026-11-11 23:59:00,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None 2026-11-11 23:59:01,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2026-11-11 23:59:01,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2026-11-11 23:59:02,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2026-11-11 23:59:03,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2026-11-11 23:59:03,386 [ scc.repo] DEBUG ## Branches found: 2026-11-11 23:59:03,386 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2026-11-11 23:59:03,386 [ scc.git] DEBUG Get sha1 of %s 2026-11-11 23:59:03,386 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:59:03,402 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-11-11 23:59:03,421 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-11-11 23:59:03,421 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-11-11 23:59:03,462 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-11-11 23:59:03,662 [ scc.git] DEBUG Updating a3dd99b..f8ff1c2 2026-11-11 23:59:04,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/90 HTTP/1.1" 200 16751 2026-11-11 23:59:04,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/89 HTTP/1.1" 200 16795 2026-11-11 23:59:05,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/69 HTTP/1.1" 200 18914 2026-11-11 23:59:05,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/88 HTTP/1.1" 200 17870 2026-11-11 23:59:05,846 [ scc.git] DEBUG ## Unique users: [] 2026-11-11 23:59:05,846 [ scc.git] DEBUG Get sha1 of %s 2026-11-11 23:59:05,846 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:59:05,870 [ scc.git] DEBUG Calling 'git submodule update' 2026-11-11 23:59:05,970 [ scc.git] DEBUG Get sha1 of %s 2026-11-11 23:59:05,970 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:59:05,981 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-11-11 23:59:06,072 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-11-11 23:59:06,157 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa511c42590> has no local changes 2026-11-11 23:59:06,158 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Updating a3dd99b..f8ff1c2 Previously merged: - PR 90 sbesson 'Remove Python 3.9 from the testing matrix' - PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step' - PR 69 will-moore 'Roi encoder allows Shape None' - PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages' Generated by OMERO-python-superbuild-push#113 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/113/)' 2026-11-11 23:59:06,265 [ scc.git] DEBUG [detached HEAD c05089a] merge master -Dorg -Ssuccess-only 2026-11-11 23:59:06,267 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-11-11 23:59:06,267 [ scc.repo] DEBUG ## PRs found: 2026-11-11 23:59:06,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2026-11-11 23:59:07,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/500 HTTP/1.1" 200 None 2026-11-11 23:59:07,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0327e364ccd0fa217d3c0d756169aa4d70c4f4ea?page=1 HTTP/1.1" 200 None 2026-11-11 23:59:08,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0327e364ccd0fa217d3c0d756169aa4d70c4f4ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-11-11 23:59:09,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0327e364ccd0fa217d3c0d756169aa4d70c4f4ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-11-11 23:59:09,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0327e364ccd0fa217d3c0d756169aa4d70c4f4ea?page=1 HTTP/1.1" 200 None 2026-11-11 23:59:10,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0327e364ccd0fa217d3c0d756169aa4d70c4f4ea?per_page=1 HTTP/1.1" 200 None 2026-11-11 23:59:10,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0327e364ccd0fa217d3c0d756169aa4d70c4f4ea?page=1 HTTP/1.1" 200 None 2026-11-11 23:59:11,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0327e364ccd0fa217d3c0d756169aa4d70c4f4ea/status HTTP/1.1" 200 None 2026-11-11 23:59:11,288 [ scc.repo] DEBUG - PR 500 sbesson 'Drop support for Python 3.10 and add Python 3.13/3.14 coverage' 2026-11-11 23:59:11,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/499 HTTP/1.1" 200 None 2026-11-11 23:59:12,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/bedceb5d8f1ac15e1c6c7e7090ec0d2b6371543e?page=1 HTTP/1.1" 200 None 2026-11-11 23:59:13,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/bedceb5d8f1ac15e1c6c7e7090ec0d2b6371543e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-11-11 23:59:13,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/bedceb5d8f1ac15e1c6c7e7090ec0d2b6371543e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-11-11 23:59:14,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/bedceb5d8f1ac15e1c6c7e7090ec0d2b6371543e?page=1 HTTP/1.1" 200 None 2026-11-11 23:59:14,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/bedceb5d8f1ac15e1c6c7e7090ec0d2b6371543e?per_page=1 HTTP/1.1" 200 None 2026-11-11 23:59:15,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/bedceb5d8f1ac15e1c6c7e7090ec0d2b6371543e?page=1 HTTP/1.1" 200 None 2026-11-11 23:59:15,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/bedceb5d8f1ac15e1c6c7e7090ec0d2b6371543e/status HTTP/1.1" 200 None 2026-11-11 23:59:15,716 [ scc.repo] DEBUG - PR 499 sbesson 'GitHub actions: download OMERO release artifacts for all platforms' 2026-11-11 23:59:16,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None 2026-11-11 23:59:16,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470/comments HTTP/1.1" 200 None 2026-11-11 23:59:17,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None 2026-11-11 23:59:17,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459/comments HTTP/1.1" 200 None 2026-11-11 23:59:18,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None 2026-11-11 23:59:19,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-11-11 23:59:19,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-11-11 23:59:20,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None 2026-11-11 23:59:20,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/57c54f02b543e8f7da852c34a0ababf95562853d?per_page=1 HTTP/1.1" 200 None 2026-11-11 23:59:21,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None 2026-11-11 23:59:21,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/status HTTP/1.1" 200 None 2026-11-11 23:59:21,929 [ scc.repo] DEBUG - PR 459 Tom-TBT 'Wrapper improvements for ROIs' 2026-11-11 23:59:22,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2026-11-11 23:59:23,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None 2026-11-11 23:59:23,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None 2026-11-11 23:59:24,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-11-11 23:59:24,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None 2026-11-11 23:59:25,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2 2026-11-11 23:59:25,066 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2026-11-11 23:59:25,067 [ scc.repo] DEBUG ## Branches found: 2026-11-11 23:59:25,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2026-11-11 23:59:25,068 [ scc.git] DEBUG Get sha1 of %s 2026-11-11 23:59:25,068 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:59:25,082 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-11-11 23:59:25,097 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-11-11 23:59:25,097 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-11-11 23:59:25,579 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-11-11 23:59:25,999 [ scc.git] DEBUG Updating b44120b5..8990768d 2026-11-11 23:59:26,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/489 HTTP/1.1" 200 21076 2026-11-11 23:59:27,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/498 HTTP/1.1" 200 18100 2026-11-11 23:59:28,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/495 HTTP/1.1" 200 18365 2026-11-11 23:59:28,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/496 HTTP/1.1" 200 17701 2026-11-11 23:59:29,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/199 HTTP/1.1" 200 19358 2026-11-11 23:59:30,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/492 HTTP/1.1" 200 17694 2026-11-11 23:59:30,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/493 HTTP/1.1" 200 16270 2026-11-11 23:59:31,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/491 HTTP/1.1" 200 19630 2026-11-11 23:59:31,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/490 HTTP/1.1" 200 19226 2026-11-11 23:59:32,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/483 HTTP/1.1" 200 17037 2026-11-11 23:59:32,394 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2026-11-11 23:59:32,961 [ scc.git] DEBUG From https://github.com/ome/omero-py 2026-11-11 23:59:32,961 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2026-11-11 23:59:32,984 [ scc.git] DEBUG Calling 'git fetch origin pull/459/head' 2026-11-11 23:59:33,780 [ scc.git] DEBUG From https://github.com/ome/omero-py 2026-11-11 23:59:33,780 [ scc.git] DEBUG * branch refs/pull/459/head -> FETCH_HEAD 2026-11-11 23:59:33,803 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2026-11-11 23:59:34,678 [ scc.git] DEBUG From https://github.com/ome/omero-py 2026-11-11 23:59:34,678 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2026-11-11 23:59:34,701 [ scc.git] DEBUG Calling 'git fetch origin pull/500/head' 2026-11-11 23:59:35,665 [ scc.git] DEBUG From https://github.com/ome/omero-py 2026-11-11 23:59:35,665 [ scc.git] DEBUG * branch refs/pull/500/head -> FETCH_HEAD 2026-11-11 23:59:35,687 [ scc.git] DEBUG ## Unique users: [] 2026-11-11 23:59:35,687 [ scc.git] DEBUG Get sha1 of %s 2026-11-11 23:59:35,687 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:59:35,698 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2026-11-11 23:59:35,756 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:59:35,769 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2026-11-11 23:59:35,992 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2026-11-11 23:59:36,049 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-11-11 23:59:36,124 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2026-11-11 23:59:36,124 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2026-11-11 23:59:36,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-11 23:59:36,320 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...57c54f02b543e8f7da852c34a0ababf95562853d' 2026-11-11 23:59:36,397 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:59:36,410 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 459 (Wrapper improvements for ROIs) 57c54f02b543e8f7da852c34a0ababf95562853d' 2026-11-11 23:59:36,644 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2026-11-11 23:59:36,694 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-11-11 23:59:36,764 [ scc.git] DEBUG src/omero/gateway/__init__.py | 45 ++++++++++++++++++++++++++++++++++++------- 2026-11-11 23:59:36,764 [ scc.git] DEBUG 1 file changed, 38 insertions(+), 7 deletions(-) 2026-11-11 23:59:36,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-11 23:59:36,969 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bedceb5d8f1ac15e1c6c7e7090ec0d2b6371543e' 2026-11-11 23:59:37,048 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:59:37,060 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (GitHub actions: download OMERO release artifacts for all platforms) bedceb5d8f1ac15e1c6c7e7090ec0d2b6371543e' 2026-11-11 23:59:37,304 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-11-11 23:59:37,377 [ scc.git] DEBUG .github/workflows/workflow.yml | 12 ++++++++---- 2026-11-11 23:59:37,378 [ scc.git] DEBUG test/unit/clitest/test_admin.py | 2 ++ 2026-11-11 23:59:37,378 [ scc.git] DEBUG test/unit/clitest/test_db.py | 3 +++ 2026-11-11 23:59:37,378 [ scc.git] DEBUG 3 files changed, 13 insertions(+), 4 deletions(-) 2026-11-11 23:59:37,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-11 23:59:37,639 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0327e364ccd0fa217d3c0d756169aa4d70c4f4ea' 2026-11-11 23:59:37,722 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:59:37,733 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 500 (Drop support for Python 3.10 and add Python 3.13/3.14 coverage) 0327e364ccd0fa217d3c0d756169aa4d70c4f4ea' 2026-11-11 23:59:38,068 [ scc.git] DEBUG Auto-merging .github/workflows/workflow.yml 2026-11-11 23:59:38,068 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/workflow.yml 2026-11-11 23:59:38,086 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-11-11 23:59:38,090 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-11-11 23:59:38,151 [ scc.git] DEBUG Calling 'git reset --hard 2d48d390a8d93f3f5604c7914459d06806ff09aa' 2026-11-11 23:59:38,338 [ scc.git] DEBUG HEAD is now at 2d48d390 merge master -Dorg -Ssuccess-only: PR 499 (GitHub actions: download OMERO release artifacts for all platforms) 2026-11-11 23:59:38,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-11 23:59:38,555 [ scc.git] DEBUG Calling 'git merge-base 8990768db971d03ea5dafabc177aab910f567c68 0327e364ccd0fa217d3c0d756169aa4d70c4f4ea' 2026-11-11 23:59:38,591 [ scc.git] DEBUG Calling 'git diff --name-only 8990768db971d03ea5dafabc177aab910f567c68..8990768db971d03ea5dafabc177aab910f567c68' 2026-11-11 23:59:38,607 [ scc.git] INFO - PR 500 sbesson 'Drop support for Python 3.10 and add Python 3.13/3.14 coverage' Conflicting PR. Removed from build [OMERO-python-superbuild-push#113](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/113/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/113/consoleText) for more details. Possible conflicts: - PR #499 sbesson 'GitHub actions: download OMERO release artifacts for all platforms' - .github/workflows/workflow.yml --conflicts 2026-11-11 23:59:38,617 [ scc.config] DEBUG Found github.token 2026-11-11 23:59:38,617 [ scc.git] DEBUG Adding comment to issue #500. 2026-11-11 23:59:39,615 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-py/issues/500/comments HTTP/1.1" 201 2111 2026-11-11 23:59:39,616 [ scc.git] DEBUG Calling 'git submodule update' 2026-11-11 23:59:39,728 [ scc.git] DEBUG Get sha1 of %s 2026-11-11 23:59:39,728 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:59:39,740 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-11-11 23:59:39,836 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-11-11 23:59:39,949 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa511a83d10> has no local changes 2026-11-11 23:59:39,949 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) Updating b44120b5..8990768d Previously merged: - PR 489 will-moore 'Add more opts support for getObjects('Annotation')' - PR 498 sbesson 'Upgrade GitHub actions' - PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo' - PR 496 will-moore 'Fix ice-3.6 download link in README' - PR 199 joshmoore 'user: allow setting default group' - PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository' - PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse' - PR 491 kkoz 'First pass at better cleanse dry-run output' - PR 490 sbesson 'Remove support from Python 3.9' - PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()' Merged PRs: - PR 391 joshmoore 'Add jstack command' - PR 459 Tom-TBT 'Wrapper improvements for ROIs' - PR 499 sbesson 'GitHub actions: download OMERO release artifacts for all platforms' Conflicting PRs (not included): - PR 500 sbesson 'Drop support for Python 3.10 and add Python 3.13/3.14 coverage' Generated by OMERO-python-superbuild-push#113 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/113/)' 2026-11-11 23:59:40,098 [ scc.git] DEBUG [detached HEAD d998ad89] merge master -Dorg -Ssuccess-only 2026-11-11 23:59:40,102 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-11-11 23:59:40,102 [ scc.git] INFO Overriding base-branch from master to develop 2026-11-11 23:59:40,102 [ scc.repo] DEBUG ## PRs found: 2026-11-11 23:59:40,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2026-11-11 23:59:41,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/232 HTTP/1.1" 200 None 2026-11-11 23:59:41,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None 2026-11-11 23:59:42,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-11-11 23:59:42,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-11-11 23:59:43,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None 2026-11-11 23:59:44,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/e190baa635f40826befc84321719243092ee849f?per_page=1 HTTP/1.1" 200 2 2026-11-11 23:59:44,052 [ scc.repo] DEBUG - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' 2026-11-11 23:59:44,053 [ scc.repo] DEBUG ## Branches found: 2026-11-11 23:59:44,053 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2026-11-11 23:59:44,054 [ scc.git] DEBUG Get sha1 of %s 2026-11-11 23:59:44,054 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:59:44,071 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-11-11 23:59:44,087 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-11-11 23:59:44,087 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-11-11 23:59:44,191 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-11-11 23:59:44,419 [ scc.git] DEBUG Updating 03b9116..636540e 2026-11-11 23:59:44,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/235 HTTP/1.1" 200 16917 2026-11-11 23:59:45,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 15981 2026-11-11 23:59:45,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 16955 2026-11-11 23:59:46,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 16867 2026-11-11 23:59:47,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 16558 2026-11-11 23:59:47,289 [ scc.git] DEBUG Calling 'git fetch origin pull/232/head' 2026-11-11 23:59:47,778 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2026-11-11 23:59:47,778 [ scc.git] DEBUG * branch refs/pull/232/head -> FETCH_HEAD 2026-11-11 23:59:47,799 [ scc.git] DEBUG ## Unique users: [] 2026-11-11 23:59:47,800 [ scc.git] DEBUG Get sha1 of %s 2026-11-11 23:59:47,800 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:59:47,811 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e190baa635f40826befc84321719243092ee849f' 2026-11-11 23:59:47,854 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:59:47,865 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 232 (Add Auto header detection to `Populate_Metadata.py`) e190baa635f40826befc84321719243092ee849f' 2026-11-11 23:59:48,111 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-11-11 23:59:48,168 [ scc.git] DEBUG omero/import_scripts/Populate_Metadata.py | 26 ++++++++++++++++++++++++-- 2026-11-11 23:59:48,168 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2026-11-11 23:59:48,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-11 23:59:48,377 [ scc.git] DEBUG Calling 'git submodule update' 2026-11-11 23:59:48,481 [ scc.git] DEBUG Get sha1 of %s 2026-11-11 23:59:48,481 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-11 23:59:48,493 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-11-11 23:59:48,586 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-11-11 23:59:48,635 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa511c43490> has no local changes 2026-11-11 23:59:48,636 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Updating 03b9116..636540e Previously merged: - PR 235 will-moore 'Batch roi export tags' - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' Merged PRs: - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' Generated by OMERO-python-superbuild-push#113 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/113/)' 2026-11-11 23:59:48,748 [ scc.git] DEBUG [detached HEAD e341881] merge master -Dorg -Ssuccess-only 2026-11-11 23:59:48,749 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-11-11 23:59:48,749 [ scc.repo] DEBUG ## PRs found: 2026-11-11 23:59:49,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2026-11-11 23:59:49,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/698 HTTP/1.1" 200 None 2026-11-11 23:59:50,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/627bc29cdd2e7650ad2507671100b7ddb5bc1e1e?page=1 HTTP/1.1" 200 None 2026-11-11 23:59:50,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/627bc29cdd2e7650ad2507671100b7ddb5bc1e1e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-11-11 23:59:51,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/627bc29cdd2e7650ad2507671100b7ddb5bc1e1e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-11-11 23:59:51,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/627bc29cdd2e7650ad2507671100b7ddb5bc1e1e?page=1 HTTP/1.1" 200 None 2026-11-11 23:59:52,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/627bc29cdd2e7650ad2507671100b7ddb5bc1e1e?per_page=1 HTTP/1.1" 200 None 2026-11-11 23:59:52,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/627bc29cdd2e7650ad2507671100b7ddb5bc1e1e?page=1 HTTP/1.1" 200 None 2026-11-11 23:59:53,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/627bc29cdd2e7650ad2507671100b7ddb5bc1e1e/status HTTP/1.1" 200 None 2026-11-11 23:59:53,436 [ scc.repo] DEBUG - PR 698 sbesson 'Fix PEP765 warnings implemented in Python 3.14' 2026-11-11 23:59:53,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/696 HTTP/1.1" 200 None 2026-11-11 23:59:54,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684 HTTP/1.1" 200 None 2026-11-11 23:59:55,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684/comments HTTP/1.1" 200 None 2026-11-11 23:59:55,008 [ scc.repo] DEBUG # ... Include label: include 2026-11-11 23:59:55,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e0875bbfd72a48f55134e36f357baa3ff553edea?page=1 HTTP/1.1" 200 None 2026-11-11 23:59:56,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e0875bbfd72a48f55134e36f357baa3ff553edea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-11-11 23:59:56,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e0875bbfd72a48f55134e36f357baa3ff553edea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-11-11 23:59:57,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682 HTTP/1.1" 200 None 2026-11-11 23:59:57,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682/comments HTTP/1.1" 200 None 2026-11-11 23:59:58,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None 2026-11-11 23:59:58,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-11-11 23:59:59,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-11-12 00:00:00,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None 2026-11-12 00:00:00,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/2e6b8720dd1d8506d474bf40e282184270ae2634?per_page=1 HTTP/1.1" 200 None 2026-11-12 00:00:01,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None 2026-11-12 00:00:01,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/status HTTP/1.1" 200 None 2026-11-12 00:00:01,625 [ scc.repo] DEBUG - PR 682 will-moore 'Initial support for JSON api /annotations endpoint' 2026-11-12 00:00:02,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643 HTTP/1.1" 200 None 2026-11-12 00:00:02,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643/comments HTTP/1.1" 200 None 2026-11-12 00:00:03,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8c81a68a11c64c7c576e1bf0710e30c1baea3b65?page=1 HTTP/1.1" 200 None 2026-11-12 00:00:03,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8c81a68a11c64c7c576e1bf0710e30c1baea3b65/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-11-12 00:00:04,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8c81a68a11c64c7c576e1bf0710e30c1baea3b65/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-11-12 00:00:05,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8c81a68a11c64c7c576e1bf0710e30c1baea3b65?page=1 HTTP/1.1" 200 None 2026-11-12 00:00:05,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/8c81a68a11c64c7c576e1bf0710e30c1baea3b65?per_page=1 HTTP/1.1" 200 None 2026-11-12 00:00:06,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8c81a68a11c64c7c576e1bf0710e30c1baea3b65?page=1 HTTP/1.1" 200 None 2026-11-12 00:00:06,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8c81a68a11c64c7c576e1bf0710e30c1baea3b65/status HTTP/1.1" 200 None 2026-11-12 00:00:06,909 [ scc.repo] DEBUG - PR 643 will-moore 'Don't disable the histogram for big images' 2026-11-12 00:00:07,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638 HTTP/1.1" 200 None 2026-11-12 00:00:08,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638/comments HTTP/1.1" 200 None 2026-11-12 00:00:08,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2026-11-12 00:00:09,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None 2026-11-12 00:00:10,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None 2026-11-12 00:00:10,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-11-12 00:00:11,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-11-12 00:00:11,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None 2026-11-12 00:00:12,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2026-11-12 00:00:13,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None 2026-11-12 00:00:13,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2026-11-12 00:00:13,657 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel code cleanup' 2026-11-12 00:00:14,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2026-11-12 00:00:14,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602/comments HTTP/1.1" 200 None 2026-11-12 00:00:15,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/786a4d628d8264251fb0b21da8b41a0564fcbc27?page=1 HTTP/1.1" 200 None 2026-11-12 00:00:15,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/786a4d628d8264251fb0b21da8b41a0564fcbc27/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-11-12 00:00:16,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/786a4d628d8264251fb0b21da8b41a0564fcbc27/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-11-12 00:00:16,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/786a4d628d8264251fb0b21da8b41a0564fcbc27?page=1 HTTP/1.1" 200 None 2026-11-12 00:00:17,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/786a4d628d8264251fb0b21da8b41a0564fcbc27?per_page=1 HTTP/1.1" 200 None 2026-11-12 00:00:18,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/786a4d628d8264251fb0b21da8b41a0564fcbc27?page=1 HTTP/1.1" 200 None 2026-11-12 00:00:18,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/786a4d628d8264251fb0b21da8b41a0564fcbc27/status HTTP/1.1" 200 None 2026-11-12 00:00:18,579 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2026-11-12 00:00:18,579 [ scc.repo] DEBUG ## Branches found: 2026-11-12 00:00:18,579 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2026-11-12 00:00:18,580 [ scc.git] DEBUG Get sha1 of %s 2026-11-12 00:00:18,580 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-12 00:00:18,608 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-11-12 00:00:18,643 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-11-12 00:00:18,643 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-11-12 00:00:20,863 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-11-12 00:00:22,357 [ scc.git] DEBUG Updating 675d57fd7..e19117680 2026-11-12 00:00:22,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/694 HTTP/1.1" 200 17569 2026-11-12 00:00:23,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/693 HTTP/1.1" 200 17567 2026-11-12 00:00:24,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/691 HTTP/1.1" 200 18804 2026-11-12 00:00:24,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/685 HTTP/1.1" 200 18414 2026-11-12 00:00:25,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/688 HTTP/1.1" 200 16436 2026-11-12 00:00:26,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/683 HTTP/1.1" 200 18441 2026-11-12 00:00:26,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/681 HTTP/1.1" 200 17419 2026-11-12 00:00:27,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/679 HTTP/1.1" 200 20596 2026-11-12 00:00:27,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/676 HTTP/1.1" 200 20247 2026-11-12 00:00:28,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/675 HTTP/1.1" 200 17478 2026-11-12 00:00:29,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/613 HTTP/1.1" 200 20393 2026-11-12 00:00:29,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/670 HTTP/1.1" 200 17859 2026-11-12 00:00:30,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/667 HTTP/1.1" 200 17478 2026-11-12 00:00:30,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/666 HTTP/1.1" 200 19633 2026-11-12 00:00:31,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/655 HTTP/1.1" 200 18266 2026-11-12 00:00:32,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/665 HTTP/1.1" 200 17586 2026-11-12 00:00:32,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/664 HTTP/1.1" 200 20046 2026-11-12 00:00:33,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/658 HTTP/1.1" 200 17922 2026-11-12 00:00:34,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/656 HTTP/1.1" 200 17710 2026-11-12 00:00:34,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/653 HTTP/1.1" 200 18308 2026-11-12 00:00:35,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/646 HTTP/1.1" 200 19115 2026-11-12 00:00:36,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/639 HTTP/1.1" 200 17985 2026-11-12 00:00:36,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/662 HTTP/1.1" 200 15980 2026-11-12 00:00:37,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/651 HTTP/1.1" 200 17438 2026-11-12 00:00:38,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/650 HTTP/1.1" 200 17482 2026-11-12 00:00:38,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/649 HTTP/1.1" 200 17558 2026-11-12 00:00:39,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/648 HTTP/1.1" 200 17704 2026-11-12 00:00:39,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/647 HTTP/1.1" 200 17472 2026-11-12 00:00:40,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/645 HTTP/1.1" 200 17212 2026-11-12 00:00:41,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/637 HTTP/1.1" 200 18744 2026-11-12 00:00:41,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/629 HTTP/1.1" 200 17664 2026-11-12 00:00:42,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/628 HTTP/1.1" 200 17224 2026-11-12 00:00:42,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/619 HTTP/1.1" 200 18805 2026-11-12 00:00:43,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/612 HTTP/1.1" 200 18510 2026-11-12 00:00:44,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/534 HTTP/1.1" 200 17952 2026-11-12 00:00:44,028 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2026-11-12 00:00:44,785 [ scc.git] DEBUG From https://github.com/ome/omero-web 2026-11-12 00:00:44,785 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2026-11-12 00:00:44,823 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2026-11-12 00:00:45,805 [ scc.git] DEBUG From https://github.com/ome/omero-web 2026-11-12 00:00:45,805 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2026-11-12 00:00:45,857 [ scc.git] DEBUG Calling 'git fetch origin pull/643/head' 2026-11-12 00:00:46,750 [ scc.git] DEBUG From https://github.com/ome/omero-web 2026-11-12 00:00:46,750 [ scc.git] DEBUG * branch refs/pull/643/head -> FETCH_HEAD 2026-11-12 00:00:46,794 [ scc.git] DEBUG Calling 'git fetch origin pull/682/head' 2026-11-12 00:00:47,895 [ scc.git] DEBUG From https://github.com/ome/omero-web 2026-11-12 00:00:47,895 [ scc.git] DEBUG * branch refs/pull/682/head -> FETCH_HEAD 2026-11-12 00:00:47,925 [ scc.git] DEBUG Calling 'git fetch origin pull/698/head' 2026-11-12 00:00:48,557 [ scc.git] DEBUG From https://github.com/ome/omero-web 2026-11-12 00:00:48,557 [ scc.git] DEBUG * branch refs/pull/698/head -> FETCH_HEAD 2026-11-12 00:00:48,582 [ scc.git] DEBUG ## Unique users: [] 2026-11-12 00:00:48,582 [ scc.git] DEBUG Get sha1 of %s 2026-11-12 00:00:48,582 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-12 00:00:48,597 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...786a4d628d8264251fb0b21da8b41a0564fcbc27' 2026-11-12 00:00:48,686 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-12 00:00:48,702 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 786a4d628d8264251fb0b21da8b41a0564fcbc27' 2026-11-12 00:00:49,360 [ scc.git] DEBUG Auto-merging omeroweb/webclient/templates/webclient/annotations/mapanns_underscore.html 2026-11-12 00:00:49,434 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-11-12 00:00:49,596 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2026-11-12 00:00:49,596 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/layout.css | 28 ++++- 2026-11-12 00:00:49,596 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2026-11-12 00:00:49,596 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 90 ++++++++++++-- 2026-11-12 00:00:49,596 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2026-11-12 00:00:49,596 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2026-11-12 00:00:49,596 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2026-11-12 00:00:49,596 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2026-11-12 00:00:49,596 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 79 ++++++------ 2026-11-12 00:00:49,596 [ scc.git] DEBUG .../includes/metadata_general_file.html | 4 +- 2026-11-12 00:00:49,596 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2026-11-12 00:00:49,597 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2026-11-12 00:00:49,597 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 29 +++-- 2026-11-12 00:00:49,597 [ scc.git] DEBUG 13 files changed, 479 insertions(+), 83 deletions(-) 2026-11-12 00:00:49,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-12 00:00:49,922 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2026-11-12 00:00:50,120 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-12 00:00:50,144 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel code cleanup) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2026-11-12 00:00:50,752 [ scc.git] DEBUG Auto-merging omeroweb/webclient/controller/container.py 2026-11-12 00:00:50,753 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2026-11-12 00:00:50,832 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-11-12 00:00:50,958 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2026-11-12 00:00:50,958 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2026-11-12 00:00:50,958 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2026-11-12 00:00:50,958 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2026-11-12 00:00:51,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-12 00:00:51,182 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8c81a68a11c64c7c576e1bf0710e30c1baea3b65' 2026-11-12 00:00:51,509 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-12 00:00:51,550 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 643 (Don't disable the histogram for big images) 8c81a68a11c64c7c576e1bf0710e30c1baea3b65' 2026-11-12 00:00:52,290 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-11-12 00:00:52,440 [ scc.git] DEBUG .../templates/webclient/annotations/metadata_preview.html | 8 ++++---- 2026-11-12 00:00:52,440 [ scc.git] DEBUG omeroweb/webgateway/static/webgateway/js/ome.histogram.js | 4 ++++ 2026-11-12 00:00:52,440 [ scc.git] DEBUG 2 files changed, 8 insertions(+), 4 deletions(-) 2026-11-12 00:00:52,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-12 00:00:52,652 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2e6b8720dd1d8506d474bf40e282184270ae2634' 2026-11-12 00:00:52,822 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-12 00:00:52,860 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 682 (Initial support for JSON api /annotations endpoint) 2e6b8720dd1d8506d474bf40e282184270ae2634' 2026-11-12 00:00:53,384 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-11-12 00:00:53,468 [ scc.git] DEBUG omeroweb/api/urls.py | 22 ++++++++++ 2026-11-12 00:00:53,468 [ scc.git] DEBUG omeroweb/api/views.py | 115 +++++++++++++++++++++++++++++++++++++++++++++++++- 2026-11-12 00:00:53,468 [ scc.git] DEBUG 2 files changed, 136 insertions(+), 1 deletion(-) 2026-11-12 00:00:53,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-12 00:00:53,694 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...627bc29cdd2e7650ad2507671100b7ddb5bc1e1e' 2026-11-12 00:00:53,940 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-12 00:00:53,969 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 698 (Fix PEP765 warnings implemented in Python 3.14) 627bc29cdd2e7650ad2507671100b7ddb5bc1e1e' 2026-11-12 00:00:54,504 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-11-12 00:00:54,587 [ scc.git] DEBUG omero/plugins/web.py | 2 +- 2026-11-12 00:00:54,587 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-11-12 00:00:54,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-12 00:00:54,809 [ scc.git] DEBUG Calling 'git submodule update' 2026-11-12 00:00:54,974 [ scc.git] DEBUG Get sha1 of %s 2026-11-12 00:00:54,974 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-11-12 00:00:54,987 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-11-12 00:00:55,099 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-11-12 00:00:55,268 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa511aad450> has no local changes 2026-11-12 00:00:55,268 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 696 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"' (status: action_required) - PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment) Updating 675d57fd7..e19117680 Previously merged: - PR 694 knabar 'Fix exception when ann.ns is null' - PR 693 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 691 sbesson 'Honor the configured login view when redirecting as the public user' - PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission' - PR 688 pwalczysko 'Fix formatting and linting failures' - PR 683 will-moore 'Post data save imgRdef' - PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web' - PR 679 knabar 'Allow POST requests from public user for specific URLs' - PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel' - PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 613 will-moore 'externalInfo display' - PR 670 sbesson 'Webclient activites: defensively cast start_time to string' - PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing' - PR 655 will-moore 'Handle invalid group id in switch_active_group' - PR 665 sbesson 'Bump minimal django-redis requirement to 6.x' - PR 664 knabar 'Pin django-pipeline to a recent version' - PR 658 will-moore 'Description scrollable if taller than 350px' - PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions' - PR 646 knabar 'Force Django 5.2 in next release' - PR 639 Rdornier 'Split view user label' - PR 662 jburel 'Add gunicorn doc links' - PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property' - PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 649 Tom-TBT 'Strip line endings from LUTs in text format' - PR 648 will-moore 'hide scrollbar for top-links' - PR 647 jburel 'Replace manual changelog by automated GH release step' - PR 645 knabar 'Update changelog for 5.30.0 release' - PR 637 knabar 'Upgrade to Django 5.2 ' - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 628 jburel 'Add protocol required since Django4' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' Merged PRs: - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel code cleanup' - PR 643 will-moore 'Don't disable the histogram for big images' - PR 682 will-moore 'Initial support for JSON api /annotations endpoint' - PR 698 sbesson 'Fix PEP765 warnings implemented in Python 3.14' Generated by OMERO-python-superbuild-push#113 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/113/)' 2026-11-12 00:00:55,615 [ scc.git] DEBUG [detached HEAD 3b400d2ab] merge master -Dorg -Ssuccess-only 2026-11-12 00:00:55,620 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-11-12 00:00:55,620 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-11-12 00:00:55,923 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2026-11-12 00:00:56,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-12 00:00:56,202 [ scc.config] DEBUG Found submodule.omero-marshal.url 2026-11-12 00:00:56,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-12 00:00:56,683 [ scc.config] DEBUG Found submodule.omero-py.url 2026-11-12 00:00:57,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-12 00:00:57,167 [ scc.config] DEBUG Found submodule.omero-scripts.url 2026-11-12 00:00:57,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-12 00:00:57,620 [ scc.config] DEBUG Found submodule.omero-web.url 2026-11-12 00:00:58,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-11-12 00:00:58,097 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-11-12 00:00:59,183 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa512a13e50> has local changes 2026-11-12 00:00:59,183 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`' - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`' - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`' - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`' Repository: ome/omero-dropbox Already up to date. Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Updating a3dd99b..f8ff1c2 Previously merged: - PR 90 sbesson 'Remove Python 3.9 from the testing matrix' - PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step' - PR 69 will-moore 'Roi encoder allows Shape None' - PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages' Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) Updating b44120b5..8990768d Previously merged: - PR 489 will-moore 'Add more opts support for getObjects('Annotation')' - PR 498 sbesson 'Upgrade GitHub actions' - PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo' - PR 496 will-moore 'Fix ice-3.6 download link in README' - PR 199 joshmoore 'user: allow setting default group' - PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository' - PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse' - PR 491 kkoz 'First pass at better cleanse dry-run output' - PR 490 sbesson 'Remove support from Python 3.9' - PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()' Merged PRs: - PR 391 joshmoore 'Add jstack command' - PR 459 Tom-TBT 'Wrapper improvements for ROIs' - PR 499 sbesson 'GitHub actions: download OMERO release artifacts for all platforms' Conflicting PRs (not included): - PR 500 sbesson 'Drop support for Python 3.10 and add Python 3.13/3.14 coverage' Repository: ome/omero-scripts Updating 03b9116..636540e Previously merged: - PR 235 will-moore 'Batch roi export tags' - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' Merged PRs: - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' Repository: ome/omero-web Excluded PRs: - PR 696 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"' (status: action_required) - PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment) Updating 675d57fd7..e19117680 Previously merged: - PR 694 knabar 'Fix exception when ann.ns is null' - PR 693 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 691 sbesson 'Honor the configured login view when redirecting as the public user' - PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission' - PR 688 pwalczysko 'Fix formatting and linting failures' - PR 683 will-moore 'Post data save imgRdef' - PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web' - PR 679 knabar 'Allow POST requests from public user for specific URLs' - PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel' - PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 613 will-moore 'externalInfo display' - PR 670 sbesson 'Webclient activites: defensively cast start_time to string' - PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing' - PR 655 will-moore 'Handle invalid group id in switch_active_group' - PR 665 sbesson 'Bump minimal django-redis requirement to 6.x' - PR 664 knabar 'Pin django-pipeline to a recent version' - PR 658 will-moore 'Description scrollable if taller than 350px' - PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions' - PR 646 knabar 'Force Django 5.2 in next release' - PR 639 Rdornier 'Split view user label' - PR 662 jburel 'Add gunicorn doc links' - PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property' - PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 649 Tom-TBT 'Strip line endings from LUTs in text format' - PR 648 will-moore 'hide scrollbar for top-links' - PR 647 jburel 'Replace manual changelog by automated GH release step' - PR 645 knabar 'Update changelog for 5.30.0 release' - PR 637 knabar 'Upgrade to Django 5.2 ' - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 628 jburel 'Add protocol required since Django4' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' Merged PRs: - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel code cleanup' - PR 643 will-moore 'Don't disable the histogram for big images' - PR 682 will-moore 'Initial support for JSON api /annotations endpoint' - PR 698 sbesson 'Fix PEP765 warnings implemented in Python 3.14' Generated by OMERO-python-superbuild-push#113 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/113/)' 2026-11-12 00:00:59,551 [ scc.git] DEBUG [detached HEAD 294ca02] merge master -Dorg -Ssuccess-only 2026-11-12 00:00:59,551 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2026-11-12 00:00:59,555 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2026-11-12 00:00:59,555 [ scc.merge] INFO Already up to date. 2026-11-12 00:00:59,555 [ scc.merge] INFO 2026-11-12 00:00:59,555 [ scc.merge] INFO Merged PRs: 2026-11-12 00:00:59,555 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`' 2026-11-12 00:00:59,555 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`' 2026-11-12 00:00:59,555 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`' 2026-11-12 00:00:59,555 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`' 2026-11-12 00:00:59,555 [ scc.merge] INFO 2026-11-12 00:00:59,555 [ scc.merge] INFO Repository: ome/omero-dropbox 2026-11-12 00:00:59,555 [ scc.merge] INFO Already up to date. 2026-11-12 00:00:59,555 [ scc.merge] INFO 2026-11-12 00:00:59,555 [ scc.merge] INFO 2026-11-12 00:00:59,555 [ scc.merge] INFO Repository: ome/omero-marshal 2026-11-12 00:00:59,555 [ scc.merge] INFO Excluded PRs: 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2026-11-12 00:00:59,556 [ scc.merge] INFO Updating a3dd99b..f8ff1c2 2026-11-12 00:00:59,556 [ scc.merge] INFO Previously merged: 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 90 sbesson 'Remove Python 3.9 from the testing matrix' 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step' 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages' 2026-11-12 00:00:59,556 [ scc.merge] INFO 2026-11-12 00:00:59,556 [ scc.merge] INFO 2026-11-12 00:00:59,556 [ scc.merge] INFO Repository: ome/omero-py 2026-11-12 00:00:59,556 [ scc.merge] INFO Excluded PRs: 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric) 2026-11-12 00:00:59,556 [ scc.merge] INFO Updating b44120b5..8990768d 2026-11-12 00:00:59,556 [ scc.merge] INFO Previously merged: 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 489 will-moore 'Add more opts support for getObjects('Annotation')' 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 498 sbesson 'Upgrade GitHub actions' 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo' 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 496 will-moore 'Fix ice-3.6 download link in README' 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository' 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse' 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 491 kkoz 'First pass at better cleanse dry-run output' 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 490 sbesson 'Remove support from Python 3.9' 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()' 2026-11-12 00:00:59,556 [ scc.merge] INFO 2026-11-12 00:00:59,556 [ scc.merge] INFO Merged PRs: 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 499 sbesson 'GitHub actions: download OMERO release artifacts for all platforms' 2026-11-12 00:00:59,556 [ scc.merge] INFO 2026-11-12 00:00:59,556 [ scc.merge] INFO Conflicting PRs (not included): 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 500 sbesson 'Drop support for Python 3.10 and add Python 3.13/3.14 coverage' 2026-11-12 00:00:59,556 [ scc.merge] INFO 2026-11-12 00:00:59,556 [ scc.merge] INFO Repository: ome/omero-scripts 2026-11-12 00:00:59,556 [ scc.merge] INFO Updating 03b9116..636540e 2026-11-12 00:00:59,556 [ scc.merge] INFO Previously merged: 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 235 will-moore 'Batch roi export tags' 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-11-12 00:00:59,556 [ scc.merge] INFO 2026-11-12 00:00:59,556 [ scc.merge] INFO Merged PRs: 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' 2026-11-12 00:00:59,556 [ scc.merge] INFO 2026-11-12 00:00:59,556 [ scc.merge] INFO Repository: ome/omero-web 2026-11-12 00:00:59,556 [ scc.merge] INFO Excluded PRs: 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 696 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"' (status: action_required) 2026-11-12 00:00:59,556 [ scc.merge] INFO - PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment) 2026-11-12 00:00:59,556 [ scc.merge] INFO Updating 675d57fd7..e19117680 2026-11-12 00:00:59,556 [ scc.merge] INFO Previously merged: 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 694 knabar 'Fix exception when ann.ns is null' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 693 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 691 sbesson 'Honor the configured login view when redirecting as the public user' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 688 pwalczysko 'Fix formatting and linting failures' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 683 will-moore 'Post data save imgRdef' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 679 knabar 'Allow POST requests from public user for specific URLs' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 670 sbesson 'Webclient activites: defensively cast start_time to string' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 655 will-moore 'Handle invalid group id in switch_active_group' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 665 sbesson 'Bump minimal django-redis requirement to 6.x' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 664 knabar 'Pin django-pipeline to a recent version' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 658 will-moore 'Description scrollable if taller than 350px' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 646 knabar 'Force Django 5.2 in next release' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 639 Rdornier 'Split view user label' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 662 jburel 'Add gunicorn doc links' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 649 Tom-TBT 'Strip line endings from LUTs in text format' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 648 will-moore 'hide scrollbar for top-links' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 647 jburel 'Replace manual changelog by automated GH release step' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 645 knabar 'Update changelog for 5.30.0 release' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 637 knabar 'Upgrade to Django 5.2 ' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2026-11-12 00:00:59,557 [ scc.merge] INFO 2026-11-12 00:00:59,557 [ scc.merge] INFO Merged PRs: 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 604 will-moore 'Right panel code cleanup' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 643 will-moore 'Don't disable the histogram for big images' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 682 will-moore 'Initial support for JSON api /annotations endpoint' 2026-11-12 00:00:59,557 [ scc.merge] INFO - PR 698 sbesson 'Fix PEP765 warnings implemented in Python 3.14' 2026-11-12 00:00:59,557 [ scc.merge] INFO 2026-11-12 00:00:59,557 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-11-12 00:00:59,557 [ scc.git] DEBUG Calling 'git remote' 2026-11-12 00:00:59,600 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2026-11-12 00:00:59,600 [ scc.git] DEBUG Calling 'git remote' 2026-11-12 00:00:59,647 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-11-12 00:00:59,647 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2026-11-12 00:00:59,648 [ scc.git] DEBUG Calling 'git remote' 2026-11-12 00:00:59,693 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-11-12 00:00:59,694 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2026-11-12 00:00:59,694 [ scc.git] DEBUG Calling 'git remote' 2026-11-12 00:00:59,734 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-11-12 00:00:59,735 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2026-11-12 00:00:59,735 [ scc.git] DEBUG Calling 'git remote' 2026-11-12 00:00:59,788 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-11-12 00:00:59,788 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2026-11-12 00:00:59,788 [ scc.git] DEBUG Calling 'git remote' 2026-11-12 00:00:59,842 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions /home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require' warnings.warn(msg) /home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() /home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require' warnings.warn(msg) /home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() /home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require' warnings.warn(msg) /home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() /home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require' warnings.warn(msg) /home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/local/lib/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/local/lib/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/local/lib/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/local/lib/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/local/lib/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/local/lib/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/local/lib/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/local/lib/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/local/lib/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/local/lib/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/local/lib/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/local/lib/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found /home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require' warnings.warn(msg) /home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() /home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require' warnings.warn(msg) /home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() /home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require' warnings.warn(msg) /home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() /home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require' warnings.warn(msg) /home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from ac93ed4 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from a3dd99b nothing to commit, working tree clean Entering 'omero-py' HEAD detached from b44120b5 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 03b9116 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 675d57fd7 nothing to commit, working tree clean HEAD detached from b68c3cf nothing to commit, working tree clean 2026-11-12 00:01:46,399 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS