![[Jenkins]](/jenkins/static/4be69ed6/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 15 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 2363a5322ba8800d4e22c32362654e92e5e017e5 (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 2363a5322ba8800d4e22c32362654e92e5e017e5 # timeout=10 Commit message: "Merge pull request #270 from ome/dependabot/submodules/omero-web-bb3ae5c" > git rev-list --no-walk 2363a5322ba8800d4e22c32362654e92e5e017e5 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 12 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3 -m venv build/venv > git submodule update --init --recursive omero-scripts # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.0-py3-none-any.whl (2.1 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.0 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.31.0-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.10.0-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.5-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.6-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.2.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.21-py2.py3-none-any.whl.metadata (1.1 kB) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.31.0-py3-none-any.whl (62 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.10.0-py3-none-any.whl (33 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.2.2-py3-none-any.whl (163 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.5-cp39-abi3-manylinux_2_28_x86_64.whl (4.6 MB) Using cached idna-3.6-py3-none-any.whl (61 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.21-py2.py3-none-any.whl (118 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.2.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.5 future-1.0.0 idna-3.6 pycparser-2.21 pyjwt-2.8.0 pynacl-1.5.0 requests-2.31.0 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.10.0 urllib3-1.26.18 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-03-26 00:34:48,204 [ scc.config] DEBUG Found github.token 2024-03-26 00:34:48,207 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-03-26 00:34:48,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:34:48,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:34:49,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-03-26 00:34:49,317 [ scc.gh] DEBUG 4213 remaining from 5000 (Reset at 00:03 2024-03-26 00:34:49,318 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-26 00:34:49,323 [ scc.git] DEBUG Check current status 2024-03-26 00:34:49,323 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-26 00:34:49,327 [ scc.git] DEBUG 2363a53 Merge pull request #270 from ome/dependabot/submodules/omero-web-bb3ae5c 2024-03-26 00:34:49,327 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-26 00:34:49,392 [ scc.git] DEBUG 586335057cf72cce7df48fd2b99f124a26100deb omero-dropbox (v5.6.0-54-g5863350) 2024-03-26 00:34:49,405 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-03-26 00:34:49,409 [ scc.git] DEBUG 0dc60bd67a5f9281e2063a0a3aeeaa119c14447d omero-py (v5.19.0-1-g0dc60bd6) 2024-03-26 00:34:49,414 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d omero-scripts (v5.8.0-1-g2078ac7) 2024-03-26 00:34:49,418 [ scc.git] DEBUG bb3ae5cab33420ff9992e07de8614f5a5c0e234a omero-web (v5.25.0-3-gbb3ae5cab) 2024-03-26 00:34:49,424 [ scc.config] DEBUG Found remote.origin.url 2024-03-26 00:34:49,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-03-26 00:34:50,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-26 00:34:50,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-26 00:34:51,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-26 00:34:51,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-26 00:34:51,533 [ scc.git] DEBUG Resetting... 2024-03-26 00:34:51,533 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-03-26 00:34:51,540 [ scc.git] DEBUG HEAD is now at 2363a53 Merge pull request #270 from ome/dependabot/submodules/omero-web-bb3ae5c 2024-03-26 00:34:51,540 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-03-26 00:34:51,596 [ scc.git] DEBUG Check current status 2024-03-26 00:34:51,596 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-26 00:34:51,601 [ scc.git] DEBUG 2363a53 Merge pull request #270 from ome/dependabot/submodules/omero-web-bb3ae5c 2024-03-26 00:34:51,602 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-26 00:34:51,647 [ scc.git] DEBUG 586335057cf72cce7df48fd2b99f124a26100deb omero-dropbox (v5.6.0-54-g5863350) 2024-03-26 00:34:51,650 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-03-26 00:34:51,653 [ scc.git] DEBUG 0dc60bd67a5f9281e2063a0a3aeeaa119c14447d omero-py (v5.19.0-1-g0dc60bd6) 2024-03-26 00:34:51,656 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d omero-scripts (v5.8.0-1-g2078ac7) 2024-03-26 00:34:51,659 [ scc.git] DEBUG bb3ae5cab33420ff9992e07de8614f5a5c0e234a omero-web (v5.25.0-3-gbb3ae5cab) 2024-03-26 00:34:51,660 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-03-26 00:34:51,661 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-03-26 00:34:51,661 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-03-26 00:34:51,661 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-03-26 00:34:51,661 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-03-26 00:34:51,661 [ scc.repo] DEBUG ## PRs found: 2024-03-26 00:34:51,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2024-03-26 00:34:51,960 [ scc.repo] DEBUG ## Branches found: 2024-03-26 00:34:51,960 [ scc.git] DEBUG Get sha1 of %s 2024-03-26 00:34:51,960 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:34:51,965 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-26 00:34:51,968 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-26 00:34:51,969 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-26 00:34:51,973 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-26 00:34:51,977 [ scc.git] DEBUG Already up to date. 2024-03-26 00:34:51,977 [ scc.git] DEBUG ## Unique users: [] 2024-03-26 00:34:51,977 [ scc.git] DEBUG Get sha1 of %s 2024-03-26 00:34:51,977 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:34:51,983 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-26 00:34:52,028 [ scc.git] DEBUG Get sha1 of %s 2024-03-26 00:34:52,028 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:34:52,033 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-26 00:34:52,205 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fb84f380d30> has no local changes 2024-03-26 00:34:52,205 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#12 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/12/)' 2024-03-26 00:34:52,232 [ scc.git] DEBUG [detached HEAD 5ea4cab] merge master -Dorg -Snone 2024-03-26 00:34:52,233 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-03-26 00:34:52,233 [ scc.merge] INFO Already up to date. 2024-03-26 00:34:52,233 [ scc.merge] INFO 2024-03-26 00:34:52,233 [ scc.merge] INFO 2024-03-26 00:34:52,233 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-03-26 00:34:52,233 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' From https://github.com/ome/omero-py 0dc60bd6..d76e17aa master -> origin/master * [new tag] v5.19.1 -> v5.19.1 Submodule path 'omero-py': checked out 'd76e17aa58ca755d239e9e8005712cd78239c62e' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-03-26 00:34:55,241 [ scc.config] DEBUG Found github.token 2024-03-26 00:34:55,244 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-03-26 00:34:55,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:34:55,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:34:56,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-03-26 00:34:56,328 [ scc.gh] DEBUG 4179 remaining from 5000 (Reset at 00:03 2024-03-26 00:34:56,329 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-26 00:34:56,334 [ scc.git] DEBUG Check current status 2024-03-26 00:34:56,334 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-26 00:34:56,339 [ scc.git] DEBUG 5ea4cab merge master -Dorg -Snone 2024-03-26 00:34:56,339 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-26 00:34:56,389 [ scc.git] DEBUG 586335057cf72cce7df48fd2b99f124a26100deb omero-dropbox (v5.6.0-54-g5863350) 2024-03-26 00:34:56,393 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-03-26 00:34:56,396 [ scc.git] DEBUG +d76e17aa58ca755d239e9e8005712cd78239c62e omero-py (v5.19.1-1-gd76e17aa) 2024-03-26 00:34:56,400 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d omero-scripts (v5.8.0-1-g2078ac7) 2024-03-26 00:34:56,404 [ scc.git] DEBUG bb3ae5cab33420ff9992e07de8614f5a5c0e234a omero-web (v5.25.0-3-gbb3ae5cab) 2024-03-26 00:34:56,411 [ scc.config] DEBUG Found remote.origin.url 2024-03-26 00:34:56,411 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-03-26 00:34:56,413 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-03-26 00:34:56,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-03-26 00:34:57,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-26 00:34:57,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-26 00:34:58,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-26 00:34:58,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-26 00:34:58,540 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-26 00:34:58,591 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-03-26 00:34:58,592 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-26 00:34:58,596 [ scc.git] DEBUG Check current status 2024-03-26 00:34:58,596 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-26 00:34:58,600 [ scc.git] DEBUG 5863350 Merge pull request #22 from sbesson/python311 2024-03-26 00:34:58,600 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-26 00:34:58,642 [ scc.config] DEBUG Found remote.origin.url 2024-03-26 00:34:59,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2024-03-26 00:34:59,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-26 00:34:59,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-26 00:35:00,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-26 00:35:00,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-26 00:35:00,769 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-26 00:35:00,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-26 00:35:00,873 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-03-26 00:35:00,873 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-26 00:35:00,879 [ scc.git] DEBUG Check current status 2024-03-26 00:35:00,880 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-26 00:35:00,885 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312 2024-03-26 00:35:00,885 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-26 00:35:00,931 [ scc.config] DEBUG Found remote.origin.url 2024-03-26 00:35:01,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2024-03-26 00:35:01,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-26 00:35:02,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-26 00:35:02,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-26 00:35:02,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-26 00:35:02,986 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-26 00:35:03,030 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-26 00:35:03,031 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-03-26 00:35:03,031 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-26 00:35:03,035 [ scc.git] DEBUG Check current status 2024-03-26 00:35:03,036 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-26 00:35:03,055 [ scc.git] DEBUG d76e17aa Bump version: 5.19.1 → 5.19.2.dev0 2024-03-26 00:35:03,056 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-26 00:35:03,120 [ scc.config] DEBUG Found remote.origin.url 2024-03-26 00:35:03,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2024-03-26 00:35:03,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-26 00:35:04,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-26 00:35:04,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-26 00:35:05,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-26 00:35:05,179 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-26 00:35:05,221 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-26 00:35:05,222 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-03-26 00:35:05,222 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-26 00:35:05,226 [ scc.git] DEBUG Check current status 2024-03-26 00:35:05,226 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-26 00:35:05,230 [ scc.git] DEBUG 2078ac7 Bump version: 5.8.0 → 5.8.1.dev0 2024-03-26 00:35:05,230 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-26 00:35:05,274 [ scc.config] DEBUG Found remote.origin.url 2024-03-26 00:35:05,275 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-03-26 00:35:05,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2024-03-26 00:35:06,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-26 00:35:06,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-26 00:35:06,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-26 00:35:07,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-26 00:35:07,395 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-26 00:35:07,441 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-26 00:35:07,442 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-03-26 00:35:07,442 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-03-26 00:35:07,447 [ scc.git] DEBUG Check current status 2024-03-26 00:35:07,447 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-26 00:35:07,469 [ scc.git] DEBUG bb3ae5cab Merge pull request #544 from ome/pre-commit-ci-update-config 2024-03-26 00:35:07,470 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-26 00:35:07,516 [ scc.config] DEBUG Found remote.origin.url 2024-03-26 00:35:07,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2024-03-26 00:35:08,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-03-26 00:35:08,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-03-26 00:35:09,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-03-26 00:35:09,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-03-26 00:35:09,569 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-26 00:35:09,613 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-26 00:35:09,613 [ scc.git] DEBUG Resetting... 2024-03-26 00:35:09,613 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-03-26 00:35:09,619 [ scc.git] DEBUG HEAD is now at 5ea4cab merge master -Dorg -Snone 2024-03-26 00:35:09,620 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-03-26 00:35:09,680 [ scc.git] DEBUG Submodule path 'omero-py': checked out '0dc60bd67a5f9281e2063a0a3aeeaa119c14447d' 2024-03-26 00:35:09,690 [ scc.git] DEBUG Check current status 2024-03-26 00:35:09,690 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-03-26 00:35:09,696 [ scc.git] DEBUG 5ea4cab merge master -Dorg -Snone 2024-03-26 00:35:09,696 [ scc.git] DEBUG Calling 'git submodule status' 2024-03-26 00:35:09,739 [ scc.git] DEBUG 586335057cf72cce7df48fd2b99f124a26100deb omero-dropbox (v5.6.0-54-g5863350) 2024-03-26 00:35:09,742 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-03-26 00:35:09,745 [ scc.git] DEBUG 0dc60bd67a5f9281e2063a0a3aeeaa119c14447d omero-py (v5.19.0-1-g0dc60bd6) 2024-03-26 00:35:09,749 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d omero-scripts (v5.8.0-1-g2078ac7) 2024-03-26 00:35:09,752 [ scc.git] DEBUG bb3ae5cab33420ff9992e07de8614f5a5c0e234a omero-web (v5.25.0-3-gbb3ae5cab) 2024-03-26 00:35:09,753 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-03-26 00:35:09,754 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-03-26 00:35:09,754 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-03-26 00:35:09,754 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-03-26 00:35:09,754 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-03-26 00:35:09,754 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-03-26 00:35:09,754 [ scc.repo] DEBUG ## PRs found: 2024-03-26 00:35:10,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2024-03-26 00:35:10,019 [ scc.repo] DEBUG ## Branches found: 2024-03-26 00:35:10,019 [ scc.git] DEBUG Get sha1 of %s 2024-03-26 00:35:10,019 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:35:10,025 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-26 00:35:10,029 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-26 00:35:10,029 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-26 00:35:10,033 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-26 00:35:10,037 [ scc.git] DEBUG Already up to date. 2024-03-26 00:35:10,037 [ scc.git] DEBUG ## Unique users: [] 2024-03-26 00:35:10,037 [ scc.git] DEBUG Get sha1 of %s 2024-03-26 00:35:10,037 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:35:10,041 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-26 00:35:10,100 [ scc.git] DEBUG Get sha1 of %s 2024-03-26 00:35:10,100 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:35:10,104 [ scc.repo] DEBUG ## PRs found: 2024-03-26 00:35:10,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2024-03-26 00:35:10,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/23 HTTP/1.1" 200 None 2024-03-26 00:35:11,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/23/comments HTTP/1.1" 200 None 2024-03-26 00:35:11,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/9be465b316e0bf0fbbf1b55a89b4dc9d7ecbfab8 HTTP/1.1" 200 None 2024-03-26 00:35:12,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/9be465b316e0bf0fbbf1b55a89b4dc9d7ecbfab8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-26 00:35:12,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/9be465b316e0bf0fbbf1b55a89b4dc9d7ecbfab8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-26 00:35:13,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/9be465b316e0bf0fbbf1b55a89b4dc9d7ecbfab8 HTTP/1.1" 200 None 2024-03-26 00:35:13,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/9be465b316e0bf0fbbf1b55a89b4dc9d7ecbfab8?per_page=1 HTTP/1.1" 200 2 2024-03-26 00:35:13,874 [ scc.repo] DEBUG - PR 23 sbesson 'Remove python-future compatibility code' 2024-03-26 00:35:14,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2024-03-26 00:35:14,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2024-03-26 00:35:15,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-03-26 00:35:15,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-26 00:35:16,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-03-26 00:35:16,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2024-03-26 00:35:16,581 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-03-26 00:35:16,581 [ scc.repo] DEBUG ## Branches found: 2024-03-26 00:35:16,582 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-03-26 00:35:16,582 [ scc.git] DEBUG Get sha1 of %s 2024-03-26 00:35:16,582 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:35:16,587 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-26 00:35:16,591 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-26 00:35:16,591 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-26 00:35:16,596 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-26 00:35:16,601 [ scc.git] DEBUG Already up to date. 2024-03-26 00:35:16,601 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2024-03-26 00:35:17,090 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2024-03-26 00:35:17,090 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2024-03-26 00:35:17,095 [ scc.git] DEBUG Calling 'git fetch origin pull/23/head' 2024-03-26 00:35:17,506 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2024-03-26 00:35:17,507 [ scc.git] DEBUG * branch refs/pull/23/head -> FETCH_HEAD 2024-03-26 00:35:17,511 [ scc.git] DEBUG ## Unique users: [] 2024-03-26 00:35:17,512 [ scc.git] DEBUG Get sha1 of %s 2024-03-26 00:35:17,512 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:35:17,516 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-03-26 00:35:17,522 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:35:17,527 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-03-26 00:35:17,586 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-26 00:35:17,590 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2024-03-26 00:35:17,591 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2024-03-26 00:35:17,591 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2024-03-26 00:35:17,591 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2024-03-26 00:35:17,591 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2024-03-26 00:35:17,591 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2024-03-26 00:35:17,591 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2024-03-26 00:35:17,591 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2024-03-26 00:35:17,591 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2024-03-26 00:35:17,591 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2024-03-26 00:35:17,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:35:17,754 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9be465b316e0bf0fbbf1b55a89b4dc9d7ecbfab8' 2024-03-26 00:35:17,760 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:35:17,764 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 23 (Remove python-future compatibility code) 9be465b316e0bf0fbbf1b55a89b4dc9d7ecbfab8' 2024-03-26 00:35:17,881 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2024-03-26 00:35:17,881 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2024-03-26 00:35:17,881 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2024-03-26 00:35:17,881 [ scc.git] DEBUG Auto-merging src/fsLists.py 2024-03-26 00:35:17,881 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2024-03-26 00:35:17,882 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2024-03-26 00:35:17,882 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2024-03-26 00:35:17,882 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2024-03-26 00:35:17,882 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2024-03-26 00:35:17,882 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-26 00:35:17,888 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-03-26 00:35:17,888 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 6 +++-- 2024-03-26 00:35:17,888 [ scc.git] DEBUG .github/workflows/tox.yml | 5 ++-- 2024-03-26 00:35:17,888 [ scc.git] DEBUG Dockerfile | 32 ---------------------- 2024-03-26 00:35:17,888 [ scc.git] DEBUG setup.py | 2 +- 2024-03-26 00:35:17,888 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 1 - 2024-03-26 00:35:17,888 [ scc.git] DEBUG src/fsDirectory.py | 8 +----- 2024-03-26 00:35:17,888 [ scc.git] DEBUG src/fsDropBox.py | 8 +----- 2024-03-26 00:35:17,889 [ scc.git] DEBUG src/fsDropBoxMonitorClient.py | 11 +------- 2024-03-26 00:35:17,889 [ scc.git] DEBUG src/fsFileServer.py | 12 ++------- 2024-03-26 00:35:17,889 [ scc.git] DEBUG src/fsLists.py | 2 -- 2024-03-26 00:35:17,889 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 9 +------ 2024-03-26 00:35:17,889 [ scc.git] DEBUG src/fsMonitor.py | 2 -- 2024-03-26 00:35:17,889 [ scc.git] DEBUG src/fsMonitorServer.py | 8 +++--- 2024-03-26 00:35:17,889 [ scc.git] DEBUG src/fsNotificationScheduler.py | 3 --- 2024-03-26 00:35:17,889 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 21 +++++---------- 2024-03-26 00:35:17,889 [ scc.git] DEBUG src/fsUtil.py | 9 +++---- 2024-03-26 00:35:17,889 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 8 +----- 2024-03-26 00:35:17,889 [ scc.git] DEBUG test/conftest.py | 2 -- 2024-03-26 00:35:17,889 [ scc.git] DEBUG test/drivers.py | 17 +++--------- 2024-03-26 00:35:17,889 [ scc.git] DEBUG test/unit/test_drivers.py | 55 ++++++++++++++++---------------------- 2024-03-26 00:35:17,889 [ scc.git] DEBUG test/unit/test_monitor.py | 2 -- 2024-03-26 00:35:17,889 [ scc.git] DEBUG test/unit/test_replay.py | 8 +----- 2024-03-26 00:35:17,889 [ scc.git] DEBUG test/unit/test_state.py | 1 - 2024-03-26 00:35:17,889 [ scc.git] DEBUG tox.ini | 3 ++- 2024-03-26 00:35:17,889 [ scc.git] DEBUG 25 files changed, 59 insertions(+), 178 deletions(-) 2024-03-26 00:35:17,889 [ scc.git] DEBUG delete mode 100644 Dockerfile 2024-03-26 00:35:18,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:35:18,157 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-26 00:35:18,202 [ scc.git] DEBUG Get sha1 of %s 2024-03-26 00:35:18,203 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:35:18,207 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-26 00:35:18,250 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-26 00:35:18,256 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f106d2967f0> has no local changes 2024-03-26 00:35:18,257 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' - PR 23 sbesson 'Remove python-future compatibility code' Generated by OMERO-python-superbuild-push#12 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/12/)' 2024-03-26 00:35:18,265 [ scc.git] DEBUG [detached HEAD aca8494] merge master -Dorg -Ssuccess-only 2024-03-26 00:35:18,266 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-26 00:35:18,266 [ scc.repo] DEBUG ## PRs found: 2024-03-26 00:35:18,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2024-03-26 00:35:19,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2024-03-26 00:35:19,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2024-03-26 00:35:20,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-03-26 00:35:20,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-26 00:35:21,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-26 00:35:21,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-03-26 00:35:22,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2024-03-26 00:35:22,022 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2024-03-26 00:35:22,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2024-03-26 00:35:22,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2024-03-26 00:35:23,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2024-03-26 00:35:23,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2024-03-26 00:35:23,837 [ scc.repo] DEBUG ## Branches found: 2024-03-26 00:35:23,837 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-03-26 00:35:23,837 [ scc.git] DEBUG Get sha1 of %s 2024-03-26 00:35:23,837 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:35:23,842 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-26 00:35:23,847 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-26 00:35:23,847 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-26 00:35:23,851 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-26 00:35:23,855 [ scc.git] DEBUG Already up to date. 2024-03-26 00:35:23,856 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2024-03-26 00:35:24,307 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2024-03-26 00:35:24,307 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2024-03-26 00:35:24,312 [ scc.git] DEBUG ## Unique users: [] 2024-03-26 00:35:24,312 [ scc.git] DEBUG Get sha1 of %s 2024-03-26 00:35:24,312 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:35:24,317 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-03-26 00:35:24,322 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:35:24,327 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-03-26 00:35:24,354 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2024-03-26 00:35:24,355 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-26 00:35:24,358 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2024-03-26 00:35:24,358 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2024-03-26 00:35:24,358 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2024-03-26 00:35:24,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:35:24,522 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-26 00:35:24,565 [ scc.git] DEBUG Get sha1 of %s 2024-03-26 00:35:24,566 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:35:24,572 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-26 00:35:24,619 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-26 00:35:24,626 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f106d296130> has no local changes 2024-03-26 00:35:24,626 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#12 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/12/)' 2024-03-26 00:35:24,635 [ scc.git] DEBUG [detached HEAD 393017d] merge master -Dorg -Ssuccess-only 2024-03-26 00:35:24,635 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-26 00:35:24,636 [ scc.repo] DEBUG ## PRs found: 2024-03-26 00:35:25,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2024-03-26 00:35:25,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/403 HTTP/1.1" 200 None 2024-03-26 00:35:26,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/403/comments HTTP/1.1" 200 None 2024-03-26 00:35:26,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/61489cddb9009af5f6f914e39ef9b02b4019f13d HTTP/1.1" 200 None 2024-03-26 00:35:27,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/61489cddb9009af5f6f914e39ef9b02b4019f13d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-26 00:35:27,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/61489cddb9009af5f6f914e39ef9b02b4019f13d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-26 00:35:28,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/61489cddb9009af5f6f914e39ef9b02b4019f13d HTTP/1.1" 200 None 2024-03-26 00:35:28,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/61489cddb9009af5f6f914e39ef9b02b4019f13d?per_page=1 HTTP/1.1" 200 None 2024-03-26 00:35:28,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/61489cddb9009af5f6f914e39ef9b02b4019f13d HTTP/1.1" 200 None 2024-03-26 00:35:29,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/61489cddb9009af5f6f914e39ef9b02b4019f13d/status HTTP/1.1" 200 None 2024-03-26 00:35:29,387 [ scc.repo] DEBUG - PR 403 sbesson 'Consume pre-build Ice Python wheel packages on Windows builds' 2024-03-26 00:35:29,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/400 HTTP/1.1" 200 None 2024-03-26 00:35:30,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/400/comments HTTP/1.1" 200 None 2024-03-26 00:35:30,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/704e50f6d170439a1b6976b64bb641b248ec0add HTTP/1.1" 200 None 2024-03-26 00:35:31,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/704e50f6d170439a1b6976b64bb641b248ec0add/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-26 00:35:31,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/704e50f6d170439a1b6976b64bb641b248ec0add/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-26 00:35:32,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/704e50f6d170439a1b6976b64bb641b248ec0add HTTP/1.1" 200 None 2024-03-26 00:35:32,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/704e50f6d170439a1b6976b64bb641b248ec0add?per_page=1 HTTP/1.1" 200 None 2024-03-26 00:35:33,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/704e50f6d170439a1b6976b64bb641b248ec0add HTTP/1.1" 200 None 2024-03-26 00:35:33,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/704e50f6d170439a1b6976b64bb641b248ec0add/status HTTP/1.1" 200 None 2024-03-26 00:35:33,577 [ scc.repo] DEBUG - PR 400 jburel 'Session ID and constructor' 2024-03-26 00:35:34,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/398 HTTP/1.1" 200 None 2024-03-26 00:35:34,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/bbf54d740f70baee1e5fd5d3fb396699af5095b3 HTTP/1.1" 200 None 2024-03-26 00:35:35,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/bbf54d740f70baee1e5fd5d3fb396699af5095b3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-26 00:35:35,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/bbf54d740f70baee1e5fd5d3fb396699af5095b3/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-26 00:35:35,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/bbf54d740f70baee1e5fd5d3fb396699af5095b3 HTTP/1.1" 200 None 2024-03-26 00:35:36,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/bbf54d740f70baee1e5fd5d3fb396699af5095b3?per_page=1 HTTP/1.1" 200 None 2024-03-26 00:35:36,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/bbf54d740f70baee1e5fd5d3fb396699af5095b3 HTTP/1.1" 200 None 2024-03-26 00:35:37,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/bbf54d740f70baee1e5fd5d3fb396699af5095b3/status HTTP/1.1" 200 None 2024-03-26 00:35:37,194 [ scc.repo] DEBUG - PR 398 will-moore 'getGridSize() handles plates with no Wells' 2024-03-26 00:35:37,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2024-03-26 00:35:38,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2024-03-26 00:35:38,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2024-03-26 00:35:39,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-26 00:35:39,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-26 00:35:40,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/394 HTTP/1.1" 200 None 2024-03-26 00:35:40,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/394/comments HTTP/1.1" 200 None 2024-03-26 00:35:40,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2024-03-26 00:35:41,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-03-26 00:35:41,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-26 00:35:42,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-26 00:35:42,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-03-26 00:35:43,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None 2024-03-26 00:35:43,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-03-26 00:35:44,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None 2024-03-26 00:35:44,174 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2024-03-26 00:35:44,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None 2024-03-26 00:35:44,636 [ scc.repo] DEBUG # ... Exclude label: exclude 2024-03-26 00:35:45,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378 HTTP/1.1" 200 None 2024-03-26 00:35:45,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378/comments HTTP/1.1" 200 None 2024-03-26 00:35:46,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None 2024-03-26 00:35:46,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None 2024-03-26 00:35:46,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-03-26 00:35:47,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-26 00:35:47,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-03-26 00:35:48,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2 2024-03-26 00:35:48,259 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-03-26 00:35:48,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2024-03-26 00:35:49,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2024-03-26 00:35:49,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-03-26 00:35:50,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-26 00:35:50,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-26 00:35:51,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-03-26 00:35:51,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None 2024-03-26 00:35:52,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-03-26 00:35:52,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None 2024-03-26 00:35:52,465 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2024-03-26 00:35:52,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None 2024-03-26 00:35:53,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None 2024-03-26 00:35:53,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2024-03-26 00:35:54,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2024-03-26 00:35:54,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-03-26 00:35:55,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-26 00:35:55,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-03-26 00:35:56,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2 2024-03-26 00:35:56,110 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj' 2024-03-26 00:35:56,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None 2024-03-26 00:35:57,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-03-26 00:35:57,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-26 00:35:57,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-03-26 00:35:58,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2 2024-03-26 00:35:58,377 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-03-26 00:35:58,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None 2024-03-26 00:35:59,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None 2024-03-26 00:35:59,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-03-26 00:36:00,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-26 00:36:00,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-03-26 00:36:01,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2 2024-03-26 00:36:01,183 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error' 2024-03-26 00:36:01,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2024-03-26 00:36:02,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2024-03-26 00:36:02,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-03-26 00:36:03,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-26 00:36:03,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-03-26 00:36:03,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2024-03-26 00:36:03,892 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2024-03-26 00:36:04,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None 2024-03-26 00:36:04,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None 2024-03-26 00:36:05,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None 2024-03-26 00:36:05,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None 2024-03-26 00:36:05,780 [ scc.repo] DEBUG ## Branches found: 2024-03-26 00:36:05,780 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-03-26 00:36:05,780 [ scc.git] DEBUG Get sha1 of %s 2024-03-26 00:36:05,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:36:05,785 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-26 00:36:05,793 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-26 00:36:05,794 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-26 00:36:05,801 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-26 00:36:05,814 [ scc.git] DEBUG Updating 0dc60bd6..d76e17aa 2024-03-26 00:36:06,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/402 HTTP/1.1" 200 None 2024-03-26 00:36:06,432 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2024-03-26 00:36:06,951 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-03-26 00:36:06,951 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2024-03-26 00:36:06,956 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head' 2024-03-26 00:36:07,418 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-03-26 00:36:07,418 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD 2024-03-26 00:36:07,423 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head' 2024-03-26 00:36:07,855 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-03-26 00:36:07,855 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD 2024-03-26 00:36:07,860 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head' 2024-03-26 00:36:08,268 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-03-26 00:36:08,268 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD 2024-03-26 00:36:08,273 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2024-03-26 00:36:08,719 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-03-26 00:36:08,719 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2024-03-26 00:36:08,726 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head' 2024-03-26 00:36:09,163 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-03-26 00:36:09,163 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD 2024-03-26 00:36:09,170 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2024-03-26 00:36:09,591 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-03-26 00:36:09,591 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2024-03-26 00:36:09,596 [ scc.git] DEBUG Calling 'git fetch origin pull/398/head' 2024-03-26 00:36:10,043 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-03-26 00:36:10,043 [ scc.git] DEBUG * branch refs/pull/398/head -> FETCH_HEAD 2024-03-26 00:36:10,048 [ scc.git] DEBUG Calling 'git fetch origin pull/400/head' 2024-03-26 00:36:10,827 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-03-26 00:36:10,828 [ scc.git] DEBUG * branch refs/pull/400/head -> FETCH_HEAD 2024-03-26 00:36:10,831 [ scc.git] DEBUG Calling 'git fetch origin pull/403/head' 2024-03-26 00:36:11,419 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-03-26 00:36:11,419 [ scc.git] DEBUG * branch refs/pull/403/head -> FETCH_HEAD 2024-03-26 00:36:11,422 [ scc.git] DEBUG ## Unique users: [] 2024-03-26 00:36:11,423 [ scc.git] DEBUG Get sha1 of %s 2024-03-26 00:36:11,423 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:36:11,429 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-03-26 00:36:11,440 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:36:11,445 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-03-26 00:36:11,504 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2024-03-26 00:36:11,504 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2024-03-26 00:36:11,504 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-26 00:36:11,509 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2024-03-26 00:36:11,509 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2024-03-26 00:36:11,509 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2024-03-26 00:36:11,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:36:11,713 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-03-26 00:36:11,726 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:36:11,732 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-03-26 00:36:11,821 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-03-26 00:36:11,821 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py 2024-03-26 00:36:11,822 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-26 00:36:11,829 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------ 2024-03-26 00:36:11,829 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++ 2024-03-26 00:36:11,829 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-) 2024-03-26 00:36:12,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:36:12,135 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-03-26 00:36:12,147 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:36:12,153 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-03-26 00:36:12,175 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py 2024-03-26 00:36:12,176 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-26 00:36:12,179 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++---- 2024-03-26 00:36:12,180 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-) 2024-03-26 00:36:12,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:36:12,548 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a' 2024-03-26 00:36:12,562 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:36:12,567 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a' 2024-03-26 00:36:12,603 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py 2024-03-26 00:36:12,603 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py 2024-03-26 00:36:12,604 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-26 00:36:12,607 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++- 2024-03-26 00:36:12,608 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +- 2024-03-26 00:36:12,608 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-) 2024-03-26 00:36:12,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:36:12,954 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-03-26 00:36:12,968 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:36:12,973 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-03-26 00:36:12,993 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-26 00:36:12,997 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2024-03-26 00:36:12,997 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2024-03-26 00:36:12,997 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2024-03-26 00:36:12,997 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2024-03-26 00:36:12,997 [ scc.git] DEBUG create mode 100644 connect.py 2024-03-26 00:36:13,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:36:13,346 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-03-26 00:36:13,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:36:13,363 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-03-26 00:36:13,409 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py 2024-03-26 00:36:13,410 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-26 00:36:13,413 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++ 2024-03-26 00:36:13,413 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-03-26 00:36:13,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:36:13,745 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2024-03-26 00:36:13,758 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:36:13,764 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2024-03-26 00:36:13,804 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2024-03-26 00:36:13,805 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-26 00:36:13,808 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2024-03-26 00:36:13,808 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2024-03-26 00:36:14,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:36:14,156 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bbf54d740f70baee1e5fd5d3fb396699af5095b3' 2024-03-26 00:36:14,168 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:36:14,176 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 398 (getGridSize() handles plates with no Wells) bbf54d740f70baee1e5fd5d3fb396699af5095b3' 2024-03-26 00:36:14,256 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-03-26 00:36:14,257 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-26 00:36:14,266 [ scc.git] DEBUG src/omero/gateway/__init__.py | 6 +++++- 2024-03-26 00:36:14,266 [ scc.git] DEBUG 1 file changed, 5 insertions(+), 1 deletion(-) 2024-03-26 00:36:14,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:36:14,569 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...704e50f6d170439a1b6976b64bb641b248ec0add' 2024-03-26 00:36:14,582 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:36:14,590 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 400 (Session ID and constructor) 704e50f6d170439a1b6976b64bb641b248ec0add' 2024-03-26 00:36:14,634 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-03-26 00:36:14,635 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-26 00:36:14,643 [ scc.git] DEBUG src/omero/gateway/__init__.py | 29 ++++++++++++++++++++++++++--- 2024-03-26 00:36:14,643 [ scc.git] DEBUG src/omero/gateway/scripts/dbhelpers.py | 3 ++- 2024-03-26 00:36:14,643 [ scc.git] DEBUG 2 files changed, 28 insertions(+), 4 deletions(-) 2024-03-26 00:36:14,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:36:14,974 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...61489cddb9009af5f6f914e39ef9b02b4019f13d' 2024-03-26 00:36:14,986 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:36:14,992 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 403 (Consume pre-build Ice Python wheel packages on Windows builds) 61489cddb9009af5f6f914e39ef9b02b4019f13d' 2024-03-26 00:36:15,014 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-26 00:36:15,016 [ scc.git] DEBUG .github/workflows/workflow.yml | 3 +-- 2024-03-26 00:36:15,016 [ scc.git] DEBUG tox.ini | 5 +++++ 2024-03-26 00:36:15,016 [ scc.git] DEBUG 2 files changed, 6 insertions(+), 2 deletions(-) 2024-03-26 00:36:15,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:36:15,386 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-26 00:36:15,431 [ scc.git] DEBUG Get sha1 of %s 2024-03-26 00:36:15,431 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:36:15,438 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-26 00:36:15,487 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-26 00:36:15,498 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f106c19daf0> has no local changes 2024-03-26 00:36:15,498 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 394 jo-mueller 'added `_repr_html_` method for `_ImageWrapper`' (user: jo-mueller) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Updating 0dc60bd6..d76e17aa Previously merged: - PR 402 sbesson 'Fix Windows regression in omero_ext.path' Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 398 will-moore 'getGridSize() handles plates with no Wells' - PR 400 jburel 'Session ID and constructor' - PR 403 sbesson 'Consume pre-build Ice Python wheel packages on Windows builds' Generated by OMERO-python-superbuild-push#12 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/12/)' 2024-03-26 00:36:15,511 [ scc.git] DEBUG [detached HEAD 4ee5fb57] merge master -Dorg -Ssuccess-only 2024-03-26 00:36:15,511 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-26 00:36:15,512 [ scc.git] INFO Overriding base-branch from master to develop 2024-03-26 00:36:15,512 [ scc.repo] DEBUG ## PRs found: 2024-03-26 00:36:16,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-03-26 00:36:16,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-03-26 00:36:16,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-03-26 00:36:17,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-03-26 00:36:17,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-03-26 00:36:18,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-03-26 00:36:18,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-03-26 00:36:19,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-03-26 00:36:19,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-26 00:36:20,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-03-26 00:36:20,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-03-26 00:36:20,719 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-03-26 00:36:21,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-03-26 00:36:21,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-03-26 00:36:22,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-03-26 00:36:22,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-03-26 00:36:22,820 [ scc.repo] DEBUG ## Branches found: 2024-03-26 00:36:22,820 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-03-26 00:36:22,820 [ scc.git] DEBUG Get sha1 of %s 2024-03-26 00:36:22,820 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:36:22,826 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-03-26 00:36:22,831 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-26 00:36:22,832 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-03-26 00:36:22,837 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-03-26 00:36:22,842 [ scc.git] DEBUG Already up to date. 2024-03-26 00:36:22,843 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-03-26 00:36:23,375 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2024-03-26 00:36:23,375 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-03-26 00:36:23,379 [ scc.git] DEBUG ## Unique users: [] 2024-03-26 00:36:23,380 [ scc.git] DEBUG Get sha1 of %s 2024-03-26 00:36:23,380 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:36:23,384 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-03-26 00:36:23,390 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:36:23,394 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-03-26 00:36:23,418 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-03-26 00:36:23,418 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-03-26 00:36:23,418 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-03-26 00:36:23,418 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-03-26 00:36:23,423 [ scc.git] DEBUG Calling 'git reset --hard 2078ac72dbf11f2733e685000a274eff81c2ac2d' 2024-03-26 00:36:23,429 [ scc.git] DEBUG HEAD is now at 2078ac7 Bump version: 5.8.0 → 5.8.1.dev0 2024-03-26 00:36:23,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:36:23,594 [ scc.git] DEBUG Calling 'git merge-base 2078ac72dbf11f2733e685000a274eff81c2ac2d 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-03-26 00:36:23,602 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..2078ac72dbf11f2733e685000a274eff81c2ac2d' 2024-03-26 00:36:23,609 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#12](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/12/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/12/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-03-26 00:36:23,616 [ scc.config] DEBUG Found github.token 2024-03-26 00:36:23,616 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-03-26 00:36:23,616 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-26 00:36:23,655 [ scc.git] DEBUG Get sha1 of %s 2024-03-26 00:36:23,655 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:36:23,660 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-26 00:36:23,703 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-26 00:36:23,710 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f106c24b5e0> has no local changes 2024-03-26 00:36:23,710 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#12 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/12/)' 2024-03-26 00:36:23,718 [ scc.git] DEBUG [detached HEAD 96eb7d9] merge master -Dorg -Ssuccess-only 2024-03-26 00:36:23,719 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-26 00:36:23,719 [ scc.repo] DEBUG ## PRs found: 2024-03-26 00:36:24,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2024-03-26 00:36:24,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/543 HTTP/1.1" 200 None 2024-03-26 00:36:25,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/542 HTTP/1.1" 200 None 2024-03-26 00:36:25,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/542/comments HTTP/1.1" 200 None 2024-03-26 00:36:25,569 [ scc.repo] DEBUG # ... Include label: include 2024-03-26 00:36:26,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/977f7b65169e6dee479197a9156993bbadd2d2e2 HTTP/1.1" 200 None 2024-03-26 00:36:26,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/977f7b65169e6dee479197a9156993bbadd2d2e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-26 00:36:27,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/977f7b65169e6dee479197a9156993bbadd2d2e2/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-26 00:36:27,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/977f7b65169e6dee479197a9156993bbadd2d2e2 HTTP/1.1" 200 None 2024-03-26 00:36:27,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/977f7b65169e6dee479197a9156993bbadd2d2e2?per_page=1 HTTP/1.1" 200 None 2024-03-26 00:36:28,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/977f7b65169e6dee479197a9156993bbadd2d2e2 HTTP/1.1" 200 None 2024-03-26 00:36:28,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/977f7b65169e6dee479197a9156993bbadd2d2e2/status HTTP/1.1" 200 None 2024-03-26 00:36:28,883 [ scc.repo] DEBUG - PR 542 Tom-TBT 'PlateAcquisition filtering with plate display' 2024-03-26 00:36:29,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/540 HTTP/1.1" 200 None 2024-03-26 00:36:29,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30 HTTP/1.1" 200 None 2024-03-26 00:36:30,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-26 00:36:30,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-26 00:36:31,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30 HTTP/1.1" 200 None 2024-03-26 00:36:31,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/ee785db51c334b1be62c14ab36414993a2319a30?per_page=1 HTTP/1.1" 200 None 2024-03-26 00:36:32,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30 HTTP/1.1" 200 None 2024-03-26 00:36:32,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30/status HTTP/1.1" 200 None 2024-03-26 00:36:32,531 [ scc.repo] DEBUG - PR 540 will-moore 'Add 'django.template.context_processors.request' to TEMPLATES' 2024-03-26 00:36:32,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/536 HTTP/1.1" 200 None 2024-03-26 00:36:33,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/536/comments HTTP/1.1" 200 None 2024-03-26 00:36:33,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/069e5c60afeaeca105e5209b14c37c87b49c2342 HTTP/1.1" 200 None 2024-03-26 00:36:34,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/069e5c60afeaeca105e5209b14c37c87b49c2342/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-26 00:36:34,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/069e5c60afeaeca105e5209b14c37c87b49c2342/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-26 00:36:35,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/069e5c60afeaeca105e5209b14c37c87b49c2342 HTTP/1.1" 200 None 2024-03-26 00:36:35,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/069e5c60afeaeca105e5209b14c37c87b49c2342?per_page=1 HTTP/1.1" 200 None 2024-03-26 00:36:36,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/069e5c60afeaeca105e5209b14c37c87b49c2342 HTTP/1.1" 200 None 2024-03-26 00:36:36,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/069e5c60afeaeca105e5209b14c37c87b49c2342/status HTTP/1.1" 200 None 2024-03-26 00:36:36,717 [ scc.repo] DEBUG - PR 536 will-moore 'imgData JSON with no stateful services' 2024-03-26 00:36:37,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2024-03-26 00:36:37,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2024-03-26 00:36:38,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2024-03-26 00:36:38,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-03-26 00:36:39,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-26 00:36:39,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-26 00:36:40,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-03-26 00:36:40,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None 2024-03-26 00:36:40,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-03-26 00:36:41,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None 2024-03-26 00:36:41,324 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-03-26 00:36:41,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/533 HTTP/1.1" 200 None 2024-03-26 00:36:42,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545 HTTP/1.1" 200 None 2024-03-26 00:36:42,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-26 00:36:43,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-26 00:36:43,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545 HTTP/1.1" 200 None 2024-03-26 00:36:44,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/e335980be1e7197826687f6c322a60c61b4aa545?per_page=1 HTTP/1.1" 200 None 2024-03-26 00:36:44,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545 HTTP/1.1" 200 None 2024-03-26 00:36:44,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545/status HTTP/1.1" 200 None 2024-03-26 00:36:44,962 [ scc.repo] DEBUG - PR 533 jburel 'use conda-forge channel' 2024-03-26 00:36:45,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2024-03-26 00:36:45,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2024-03-26 00:36:46,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-03-26 00:36:46,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-26 00:36:47,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-03-26 00:36:47,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-03-26 00:36:48,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None 2024-03-26 00:36:48,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-03-26 00:36:49,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None 2024-03-26 00:36:49,101 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2024-03-26 00:36:49,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/399 HTTP/1.1" 200 None 2024-03-26 00:36:50,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/225 HTTP/1.1" 200 None 2024-03-26 00:36:50,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/225/comments HTTP/1.1" 200 None 2024-03-26 00:36:51,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/200678050/issues/225/comments?page=2 HTTP/1.1" 200 None 2024-03-26 00:36:51,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2024-03-26 00:36:52,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2024-03-26 00:36:52,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/219d9e721304a4c46b4d73ef9ff3777549d69615 HTTP/1.1" 200 None 2024-03-26 00:36:52,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/219d9e721304a4c46b4d73ef9ff3777549d69615/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-03-26 00:36:53,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/219d9e721304a4c46b4d73ef9ff3777549d69615 HTTP/1.1" 200 None 2024-03-26 00:36:53,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/219d9e721304a4c46b4d73ef9ff3777549d69615?per_page=1 HTTP/1.1" 200 2 2024-03-26 00:36:53,896 [ scc.repo] DEBUG - PR 168 stick 'Changes to nginx @maintenance handler' 2024-03-26 00:36:54,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/17 HTTP/1.1" 200 None 2024-03-26 00:36:54,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/17/comments HTTP/1.1" 200 None 2024-03-26 00:36:54,854 [ scc.repo] DEBUG ## Branches found: 2024-03-26 00:36:54,854 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-03-26 00:36:54,854 [ scc.git] DEBUG Get sha1 of %s 2024-03-26 00:36:54,854 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:36:54,860 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-03-26 00:36:54,864 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-03-26 00:36:54,864 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-03-26 00:36:54,868 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-03-26 00:36:54,874 [ scc.git] DEBUG Already up to date. 2024-03-26 00:36:54,874 [ scc.git] DEBUG Calling 'git fetch origin pull/168/head' 2024-03-26 00:36:55,470 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-03-26 00:36:55,470 [ scc.git] DEBUG * branch refs/pull/168/head -> FETCH_HEAD 2024-03-26 00:36:55,475 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2024-03-26 00:36:55,957 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-03-26 00:36:55,958 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2024-03-26 00:36:55,967 [ scc.git] DEBUG Calling 'git fetch origin pull/533/head' 2024-03-26 00:36:56,386 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-03-26 00:36:56,386 [ scc.git] DEBUG * branch refs/pull/533/head -> FETCH_HEAD 2024-03-26 00:36:56,391 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2024-03-26 00:36:56,832 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-03-26 00:36:56,832 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2024-03-26 00:36:56,837 [ scc.git] DEBUG Calling 'git fetch origin pull/536/head' 2024-03-26 00:36:57,469 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-03-26 00:36:57,469 [ scc.git] DEBUG * branch refs/pull/536/head -> FETCH_HEAD 2024-03-26 00:36:57,475 [ scc.git] DEBUG Calling 'git fetch origin pull/540/head' 2024-03-26 00:36:57,906 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-03-26 00:36:57,907 [ scc.git] DEBUG * branch refs/pull/540/head -> FETCH_HEAD 2024-03-26 00:36:57,911 [ scc.git] DEBUG Calling 'git fetch origin pull/542/head' 2024-03-26 00:36:58,615 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-03-26 00:36:58,616 [ scc.git] DEBUG * branch refs/pull/542/head -> FETCH_HEAD 2024-03-26 00:36:58,620 [ scc.git] DEBUG ## Unique users: [] 2024-03-26 00:36:58,621 [ scc.git] DEBUG Get sha1 of %s 2024-03-26 00:36:58,621 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:36:58,626 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...219d9e721304a4c46b4d73ef9ff3777549d69615' 2024-03-26 00:36:58,643 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:36:58,648 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 168 (Changes to nginx @maintenance handler) 219d9e721304a4c46b4d73ef9ff3777549d69615' 2024-03-26 00:36:58,707 [ scc.git] DEBUG Auto-merging test/unit/test_web.py 2024-03-26 00:36:58,707 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/unit/test_web.py 2024-03-26 00:36:58,708 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-03-26 00:36:58,709 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-03-26 00:36:58,717 [ scc.git] DEBUG Calling 'git reset --hard bb3ae5cab33420ff9992e07de8614f5a5c0e234a' 2024-03-26 00:36:58,727 [ scc.git] DEBUG HEAD is now at bb3ae5cab Merge pull request #544 from ome/pre-commit-ci-update-config 2024-03-26 00:36:58,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:36:58,887 [ scc.git] DEBUG Calling 'git merge-base bb3ae5cab33420ff9992e07de8614f5a5c0e234a 219d9e721304a4c46b4d73ef9ff3777549d69615' 2024-03-26 00:36:58,902 [ scc.git] DEBUG Calling 'git diff --name-only 632d14a9cab5319c6b1bd9190d441a95e457103b..bb3ae5cab33420ff9992e07de8614f5a5c0e234a' 2024-03-26 00:36:59,062 [ scc.git] INFO - PR 168 stick 'Changes to nginx @maintenance handler' Conflicting PR. Removed from build [OMERO-python-superbuild-push#12](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/12/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/12/consoleText) for more details. Possible conflicts: - Upstream changes - test/unit/test_web.py --conflicts 2024-03-26 00:36:59,068 [ scc.config] DEBUG Found github.token 2024-03-26 00:36:59,068 [ scc.git] DEBUG Not adding comment to issue #168, already --conflicts. 2024-03-26 00:36:59,068 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-03-26 00:36:59,073 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:36:59,077 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-03-26 00:36:59,142 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2024-03-26 00:36:59,142 [ scc.git] DEBUG Auto-merging setup.py 2024-03-26 00:36:59,143 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-26 00:36:59,147 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2024-03-26 00:36:59,147 [ scc.git] DEBUG setup.py | 1 + 2024-03-26 00:36:59,147 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2024-03-26 00:36:59,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:36:59,336 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e335980be1e7197826687f6c322a60c61b4aa545' 2024-03-26 00:36:59,342 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:36:59,347 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 533 (use conda-forge channel) e335980be1e7197826687f6c322a60c61b4aa545' 2024-03-26 00:36:59,361 [ scc.git] DEBUG Auto-merging README.rst 2024-03-26 00:36:59,363 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-26 00:36:59,366 [ scc.git] DEBUG README.rst | 3 +-- 2024-03-26 00:36:59,366 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 2 deletions(-) 2024-03-26 00:36:59,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:36:59,743 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-03-26 00:36:59,749 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:36:59,754 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-03-26 00:36:59,782 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2024-03-26 00:36:59,783 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-03-26 00:36:59,783 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-26 00:36:59,787 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2024-03-26 00:36:59,787 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2024-03-26 00:36:59,787 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2024-03-26 00:37:00,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:37:00,164 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...069e5c60afeaeca105e5209b14c37c87b49c2342' 2024-03-26 00:37:00,171 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:37:00,176 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 536 (imgData JSON with no stateful services) 069e5c60afeaeca105e5209b14c37c87b49c2342' 2024-03-26 00:37:00,258 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2024-03-26 00:37:00,258 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-03-26 00:37:00,259 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-26 00:37:00,264 [ scc.git] DEBUG omeroweb/webclient/views.py | 4 +- 2024-03-26 00:37:00,264 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 132 +++++++++++++++++++++++++++++++++++++---- 2024-03-26 00:37:00,264 [ scc.git] DEBUG omeroweb/webgateway/util.py | 38 ++++++++++++ 2024-03-26 00:37:00,264 [ scc.git] DEBUG 3 files changed, 163 insertions(+), 11 deletions(-) 2024-03-26 00:37:00,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:37:00,573 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ee785db51c334b1be62c14ab36414993a2319a30' 2024-03-26 00:37:00,580 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:37:00,583 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 540 (Add 'django.template.context_processors.request' to TEMPLATES) ee785db51c334b1be62c14ab36414993a2319a30' 2024-03-26 00:37:00,617 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2024-03-26 00:37:00,618 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-26 00:37:00,622 [ scc.git] DEBUG omeroweb/settings.py | 1 + 2024-03-26 00:37:00,622 [ scc.git] DEBUG 1 file changed, 1 insertion(+) 2024-03-26 00:37:00,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:37:00,985 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...977f7b65169e6dee479197a9156993bbadd2d2e2' 2024-03-26 00:37:00,993 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:37:00,998 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 542 (PlateAcquisition filtering with plate display) 977f7b65169e6dee479197a9156993bbadd2d2e2' 2024-03-26 00:37:01,044 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2024-03-26 00:37:01,045 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-03-26 00:37:01,053 [ scc.git] DEBUG .../data/includes/center_plugin.thumbs.js.html | 13 +++------- 2024-03-26 00:37:01,053 [ scc.git] DEBUG .../webclient/templates/webclient/data/plate.html | 10 ++++---- 2024-03-26 00:37:01,053 [ scc.git] DEBUG omeroweb/webclient/views.py | 17 ++++++++++++ 2024-03-26 00:37:01,053 [ scc.git] DEBUG omeroweb/webgateway/plategrid.py | 30 +++++++++++++++++++--- 2024-03-26 00:37:01,053 [ scc.git] DEBUG .../static/webgateway/js/ome.plateview.js | 16 +++++++----- 2024-03-26 00:37:01,053 [ scc.git] DEBUG omeroweb/webgateway/urls.py | 2 +- 2024-03-26 00:37:01,054 [ scc.git] DEBUG omeroweb/webgateway/views.py | 16 ++++++++++-- 2024-03-26 00:37:01,054 [ scc.git] DEBUG 7 files changed, 78 insertions(+), 26 deletions(-) 2024-03-26 00:37:01,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:37:01,391 [ scc.git] DEBUG Calling 'git submodule update' 2024-03-26 00:37:01,433 [ scc.git] DEBUG Get sha1 of %s 2024-03-26 00:37:01,434 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-03-26 00:37:01,438 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-26 00:37:01,479 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-26 00:37:01,491 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f106c232bb0> has no local changes 2024-03-26 00:37:01,491 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 543 knabar 'Make long-running tasks like "Save to all" more robust' (stage: draft) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 399 will-moore 'Handle chgrp dry-run LogicalChannel[ID] to show images' (stage: draft) - PR 225 will-moore 'Query string ids' (exclude comment) - PR 17 will-moore 'Right panel performance fixes' (exclude comment) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 533 jburel 'use conda-forge channel' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 536 will-moore 'imgData JSON with no stateful services' - PR 540 will-moore 'Add 'django.template.context_processors.request' to TEMPLATES' - PR 542 Tom-TBT 'PlateAcquisition filtering with plate display' Conflicting PRs (not included): - PR 168 stick 'Changes to nginx @maintenance handler' Generated by OMERO-python-superbuild-push#12 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/12/)' 2024-03-26 00:37:01,505 [ scc.git] DEBUG [detached HEAD 4b3f1b50e] merge master -Dorg -Ssuccess-only 2024-03-26 00:37:01,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-26 00:37:01,505 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-03-26 00:37:01,557 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2024-03-26 00:37:01,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:37:01,834 [ scc.config] DEBUG Found submodule.omero-marshal.url 2024-03-26 00:37:02,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:37:02,261 [ scc.config] DEBUG Found submodule.omero-py.url 2024-03-26 00:37:02,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:37:02,666 [ scc.config] DEBUG Found submodule.omero-scripts.url 2024-03-26 00:37:03,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:37:03,074 [ scc.config] DEBUG Found submodule.omero-web.url 2024-03-26 00:37:03,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-03-26 00:37:03,482 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-03-26 00:37:03,510 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f106f501d30> has local changes 2024-03-26 00:37:03,510 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' - PR 23 sbesson 'Remove python-future compatibility code' Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 394 jo-mueller 'added `_repr_html_` method for `_ImageWrapper`' (user: jo-mueller) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Updating 0dc60bd6..d76e17aa Previously merged: - PR 402 sbesson 'Fix Windows regression in omero_ext.path' Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 398 will-moore 'getGridSize() handles plates with no Wells' - PR 400 jburel 'Session ID and constructor' - PR 403 sbesson 'Consume pre-build Ice Python wheel packages on Windows builds' Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 543 knabar 'Make long-running tasks like "Save to all" more robust' (stage: draft) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 399 will-moore 'Handle chgrp dry-run LogicalChannel[ID] to show images' (stage: draft) - PR 225 will-moore 'Query string ids' (exclude comment) - PR 17 will-moore 'Right panel performance fixes' (exclude comment) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 533 jburel 'use conda-forge channel' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 536 will-moore 'imgData JSON with no stateful services' - PR 540 will-moore 'Add 'django.template.context_processors.request' to TEMPLATES' - PR 542 Tom-TBT 'PlateAcquisition filtering with plate display' Conflicting PRs (not included): - PR 168 stick 'Changes to nginx @maintenance handler' Generated by OMERO-python-superbuild-push#12 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/12/)' 2024-03-26 00:37:03,520 [ scc.git] DEBUG [detached HEAD ae14a86] merge master -Dorg -Ssuccess-only 2024-03-26 00:37:03,520 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-03-26 00:37:03,520 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2024-03-26 00:37:03,520 [ scc.merge] INFO Already up to date. 2024-03-26 00:37:03,520 [ scc.merge] INFO 2024-03-26 00:37:03,520 [ scc.merge] INFO 2024-03-26 00:37:03,520 [ scc.merge] INFO Repository: ome/omero-dropbox 2024-03-26 00:37:03,520 [ scc.merge] INFO Already up to date. 2024-03-26 00:37:03,520 [ scc.merge] INFO 2024-03-26 00:37:03,520 [ scc.merge] INFO Merged PRs: 2024-03-26 00:37:03,520 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-03-26 00:37:03,520 [ scc.merge] INFO - PR 23 sbesson 'Remove python-future compatibility code' 2024-03-26 00:37:03,520 [ scc.merge] INFO 2024-03-26 00:37:03,520 [ scc.merge] INFO Repository: ome/omero-marshal 2024-03-26 00:37:03,520 [ scc.merge] INFO Excluded PRs: 2024-03-26 00:37:03,520 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2024-03-26 00:37:03,520 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2024-03-26 00:37:03,521 [ scc.merge] INFO Already up to date. 2024-03-26 00:37:03,521 [ scc.merge] INFO 2024-03-26 00:37:03,521 [ scc.merge] INFO Merged PRs: 2024-03-26 00:37:03,521 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2024-03-26 00:37:03,521 [ scc.merge] INFO 2024-03-26 00:37:03,521 [ scc.merge] INFO Repository: ome/omero-py 2024-03-26 00:37:03,521 [ scc.merge] INFO Excluded PRs: 2024-03-26 00:37:03,521 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2024-03-26 00:37:03,521 [ scc.merge] INFO - PR 394 jo-mueller 'added `_repr_html_` method for `_ImageWrapper`' (user: jo-mueller) 2024-03-26 00:37:03,521 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude) 2024-03-26 00:37:03,521 [ scc.merge] INFO - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu) 2024-03-26 00:37:03,521 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) 2024-03-26 00:37:03,521 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) 2024-03-26 00:37:03,521 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) 2024-03-26 00:37:03,521 [ scc.merge] INFO Updating 0dc60bd6..d76e17aa 2024-03-26 00:37:03,521 [ scc.merge] INFO Previously merged: 2024-03-26 00:37:03,521 [ scc.merge] INFO - PR 402 sbesson 'Fix Windows regression in omero_ext.path' 2024-03-26 00:37:03,521 [ scc.merge] INFO 2024-03-26 00:37:03,521 [ scc.merge] INFO Merged PRs: 2024-03-26 00:37:03,521 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2024-03-26 00:37:03,521 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error' 2024-03-26 00:37:03,521 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-03-26 00:37:03,521 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' 2024-03-26 00:37:03,521 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2024-03-26 00:37:03,521 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-03-26 00:37:03,521 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2024-03-26 00:37:03,521 [ scc.merge] INFO - PR 398 will-moore 'getGridSize() handles plates with no Wells' 2024-03-26 00:37:03,521 [ scc.merge] INFO - PR 400 jburel 'Session ID and constructor' 2024-03-26 00:37:03,521 [ scc.merge] INFO - PR 403 sbesson 'Consume pre-build Ice Python wheel packages on Windows builds' 2024-03-26 00:37:03,521 [ scc.merge] INFO 2024-03-26 00:37:03,521 [ scc.merge] INFO Repository: ome/omero-scripts 2024-03-26 00:37:03,521 [ scc.merge] INFO Excluded PRs: 2024-03-26 00:37:03,521 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-03-26 00:37:03,521 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-03-26 00:37:03,521 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-03-26 00:37:03,521 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-03-26 00:37:03,521 [ scc.merge] INFO Already up to date. 2024-03-26 00:37:03,521 [ scc.merge] INFO 2024-03-26 00:37:03,521 [ scc.merge] INFO Conflicting PRs (not included): 2024-03-26 00:37:03,521 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-03-26 00:37:03,522 [ scc.merge] INFO 2024-03-26 00:37:03,522 [ scc.merge] INFO Repository: ome/omero-web 2024-03-26 00:37:03,522 [ scc.merge] INFO Excluded PRs: 2024-03-26 00:37:03,522 [ scc.merge] INFO - PR 543 knabar 'Make long-running tasks like "Save to all" more robust' (stage: draft) 2024-03-26 00:37:03,522 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2024-03-26 00:37:03,522 [ scc.merge] INFO - PR 399 will-moore 'Handle chgrp dry-run LogicalChannel[ID] to show images' (stage: draft) 2024-03-26 00:37:03,522 [ scc.merge] INFO - PR 225 will-moore 'Query string ids' (exclude comment) 2024-03-26 00:37:03,522 [ scc.merge] INFO - PR 17 will-moore 'Right panel performance fixes' (exclude comment) 2024-03-26 00:37:03,522 [ scc.merge] INFO Already up to date. 2024-03-26 00:37:03,522 [ scc.merge] INFO 2024-03-26 00:37:03,522 [ scc.merge] INFO Merged PRs: 2024-03-26 00:37:03,522 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2024-03-26 00:37:03,522 [ scc.merge] INFO - PR 533 jburel 'use conda-forge channel' 2024-03-26 00:37:03,522 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-03-26 00:37:03,522 [ scc.merge] INFO - PR 536 will-moore 'imgData JSON with no stateful services' 2024-03-26 00:37:03,522 [ scc.merge] INFO - PR 540 will-moore 'Add 'django.template.context_processors.request' to TEMPLATES' 2024-03-26 00:37:03,522 [ scc.merge] INFO - PR 542 Tom-TBT 'PlateAcquisition filtering with plate display' 2024-03-26 00:37:03,522 [ scc.merge] INFO 2024-03-26 00:37:03,522 [ scc.merge] INFO Conflicting PRs (not included): 2024-03-26 00:37:03,522 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' 2024-03-26 00:37:03,522 [ scc.merge] INFO 2024-03-26 00:37:03,522 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-03-26 00:37:03,522 [ scc.git] DEBUG Calling 'git remote' 2024-03-26 00:37:03,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-03-26 00:37:03,527 [ scc.git] DEBUG Calling 'git remote' 2024-03-26 00:37:03,531 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-26 00:37:03,531 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-03-26 00:37:03,532 [ scc.git] DEBUG Calling 'git remote' 2024-03-26 00:37:03,535 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-26 00:37:03,535 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-03-26 00:37:03,535 [ scc.git] DEBUG Calling 'git remote' 2024-03-26 00:37:03,540 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-26 00:37:03,540 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-03-26 00:37:03,540 [ scc.git] DEBUG Calling 'git remote' 2024-03-26 00:37:03,543 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-03-26 00:37:03,543 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-03-26 00:37:03,544 [ scc.git] DEBUG Calling 'git remote' 2024-03-26 00:37:03,548 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/usr/lib64/python3.9/urllib/request.py", line 1346, in do_open h.request(req.get_method(), req.selector, req.data, headers, File "/usr/lib64/python3.9/http/client.py", line 1285, in request self._send_request(method, url, body, headers, encode_chunked) File "/usr/lib64/python3.9/http/client.py", line 1331, in _send_request self.endheaders(body, encode_chunked=encode_chunked) File "/usr/lib64/python3.9/http/client.py", line 1280, in endheaders self._send_output(message_body, encode_chunked=encode_chunked) File "/usr/lib64/python3.9/http/client.py", line 1040, in _send_output self.send(msg) File "/usr/lib64/python3.9/http/client.py", line 980, in send self.connect() File "/usr/lib64/python3.9/http/client.py", line 1447, in connect super().connect() File "/usr/lib64/python3.9/http/client.py", line 946, in connect self.sock = self._create_connection( File "/usr/lib64/python3.9/socket.py", line 823, in create_connection for res in getaddrinfo(host, port, 0, SOCK_STREAM): File "/usr/lib64/python3.9/socket.py", line 954, in getaddrinfo for res in _socket.getaddrinfo(host, port, family, type, proto, flags): socket.gaierror: [Errno -2] Name or service not known During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 517, in open response = self._open(req, data) File "/usr/lib64/python3.9/urllib/request.py", line 534, in _open result = self._call_chain(self.handle_open, protocol, protocol + File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 1389, in https_open return self.do_open(http.client.HTTPSConnection, req, File "/usr/lib64/python3.9/urllib/request.py", line 1349, in do_open raise URLError(err) urllib.error.URLError: <urlopen error [Errno -2] Name or service not known> Downloading https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/usr/lib64/python3.9/urllib/request.py", line 1346, in do_open h.request(req.get_method(), req.selector, req.data, headers, File "/usr/lib64/python3.9/http/client.py", line 1285, in request self._send_request(method, url, body, headers, encode_chunked) File "/usr/lib64/python3.9/http/client.py", line 1331, in _send_request self.endheaders(body, encode_chunked=encode_chunked) File "/usr/lib64/python3.9/http/client.py", line 1280, in endheaders self._send_output(message_body, encode_chunked=encode_chunked) File "/usr/lib64/python3.9/http/client.py", line 1040, in _send_output self.send(msg) File "/usr/lib64/python3.9/http/client.py", line 980, in send self.connect() File "/usr/lib64/python3.9/http/client.py", line 1447, in connect super().connect() File "/usr/lib64/python3.9/http/client.py", line 946, in connect self.sock = self._create_connection( File "/usr/lib64/python3.9/socket.py", line 823, in create_connection for res in getaddrinfo(host, port, 0, SOCK_STREAM): File "/usr/lib64/python3.9/socket.py", line 954, in getaddrinfo for res in _socket.getaddrinfo(host, port, family, type, proto, flags): socket.gaierror: [Errno -2] Name or service not known During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 517, in open response = self._open(req, data) File "/usr/lib64/python3.9/urllib/request.py", line 534, in _open result = self._call_chain(self.handle_open, protocol, protocol + File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 1389, in https_open return self.do_open(http.client.HTTPSConnection, req, File "/usr/lib64/python3.9/urllib/request.py", line 1349, in do_open raise URLError(err) urllib.error.URLError: <urlopen error [Errno -2] Name or service not known> grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 5863350 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from cca4c2f nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 0dc60bd6 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 2078ac7 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from bb3ae5cab nothing to commit, working tree clean HEAD detached from 2363a53 nothing to commit, working tree clean 2024-03-26 00:37:34,388 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS