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+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-09-11 09:53:13,075 [  scc.config] DEBUG Found github.token
2024-09-11 09:53:13,078 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-09-11 09:53:13,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 09:53:13,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 09:53:14,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-09-11 09:53:14,042 [      scc.gh] DEBUG 4636 remaining from 5000 (Reset at 10:09
2024-09-11 09:53:14,042 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-11 09:53:14,046 [     scc.git] DEBUG Check current status
2024-09-11 09:53:14,046 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-11 09:53:14,050 [     scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-09-11 09:53:14,050 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-11 09:53:14,090 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-09-11 09:53:14,093 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-09-11 09:53:14,097 [     scc.git] DEBUG  749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-09-11 09:53:14,101 [     scc.git] DEBUG  312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-09-11 09:53:14,105 [     scc.git] DEBUG  da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-09-11 09:53:14,109 [  scc.config] DEBUG Found remote.origin.url
2024-09-11 09:53:14,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-09-11 09:53:14,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-11 09:53:15,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-11 09:53:15,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-11 09:53:16,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-11 09:53:16,183 [     scc.git] DEBUG Resetting...
2024-09-11 09:53:16,183 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-09-11 09:53:16,189 [     scc.git] DEBUG HEAD is now at e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-09-11 09:53:16,189 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-09-11 09:53:16,240 [     scc.git] DEBUG Check current status
2024-09-11 09:53:16,240 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-11 09:53:16,244 [     scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-09-11 09:53:16,244 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-11 09:53:16,281 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-09-11 09:53:16,283 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-09-11 09:53:16,287 [     scc.git] DEBUG  749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-09-11 09:53:16,290 [     scc.git] DEBUG  312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-09-11 09:53:16,293 [     scc.git] DEBUG  da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-09-11 09:53:16,294 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-09-11 09:53:16,295 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-09-11 09:53:16,295 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-09-11 09:53:16,295 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-09-11 09:53:16,295 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-09-11 09:53:16,295 [    scc.repo] DEBUG ## PRs found:
2024-09-11 09:53:16,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-09-11 09:53:16,608 [    scc.repo] DEBUG ## Branches found:
2024-09-11 09:53:16,608 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 09:53:16,608 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:53:16,612 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-11 09:53:16,615 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-11 09:53:16,615 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-11 09:53:16,619 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-11 09:53:16,622 [     scc.git] DEBUG Already up to date.

2024-09-11 09:53:16,623 [     scc.git] DEBUG ## Unique users: []
2024-09-11 09:53:16,623 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 09:53:16,623 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:53:16,626 [     scc.git] DEBUG Calling 'git submodule update'
2024-09-11 09:53:16,663 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 09:53:16,663 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:53:16,666 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-09-11 09:53:16,978 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f6f00a5ce20> has no local changes
2024-09-11 09:53:16,979 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-python-superbuild
Already up to date.


Generated by OMERO-python-superbuild-push#169 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/169/)'
2024-09-11 09:53:17,004 [     scc.git] DEBUG [detached HEAD 29f2e1f] merge master -Dorg -Snone
2024-09-11 09:53:17,004 [   scc.merge] INFO  Repository: ome/omero-python-superbuild
2024-09-11 09:53:17,005 [   scc.merge] INFO  Already up to date.
2024-09-11 09:53:17,005 [   scc.merge] INFO  
2024-09-11 09:53:17,005 [   scc.merge] INFO  
2024-09-11 09:53:17,005 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-09-11 09:53:17,005 [     scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master

submodules:
  omero-scripts:
    base-branch: develop
2024-09-11 09:53:19,377 [  scc.config] DEBUG Found github.token
2024-09-11 09:53:19,380 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-09-11 09:53:19,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 09:53:19,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 09:53:20,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-09-11 09:53:20,304 [      scc.gh] DEBUG 4628 remaining from 5000 (Reset at 10:09
2024-09-11 09:53:20,305 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-11 09:53:20,308 [     scc.git] DEBUG Check current status
2024-09-11 09:53:20,309 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-11 09:53:20,312 [     scc.git] DEBUG 29f2e1f merge master -Dorg -Snone
2024-09-11 09:53:20,312 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-11 09:53:20,353 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-09-11 09:53:20,355 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-09-11 09:53:20,359 [     scc.git] DEBUG  749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-09-11 09:53:20,363 [     scc.git] DEBUG  312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-09-11 09:53:20,366 [     scc.git] DEBUG  da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-09-11 09:53:20,371 [  scc.config] DEBUG Found remote.origin.url
2024-09-11 09:53:20,371 [     scc.git] DEBUG Reading repository configuration from repositories.yml
2024-09-11 09:53:20,373 [     scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
  omero-scripts:
    base-branch: develop

2024-09-11 09:53:20,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-09-11 09:53:21,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-11 09:53:21,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-11 09:53:22,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-11 09:53:22,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-11 09:53:22,446 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-11 09:53:22,498 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-09-11 09:53:22,498 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-11 09:53:22,502 [     scc.git] DEBUG Check current status
2024-09-11 09:53:22,502 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-11 09:53:22,506 [     scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-09-11 09:53:22,506 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-11 09:53:22,549 [  scc.config] DEBUG Found remote.origin.url
2024-09-11 09:53:22,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-09-11 09:53:23,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-11 09:53:23,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-11 09:53:24,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-11 09:53:24,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-11 09:53:24,584 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-11 09:53:24,622 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-11 09:53:24,623 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-09-11 09:53:24,623 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-11 09:53:24,626 [     scc.git] DEBUG Check current status
2024-09-11 09:53:24,626 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-11 09:53:24,630 [     scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-09-11 09:53:24,630 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-11 09:53:24,671 [  scc.config] DEBUG Found remote.origin.url
2024-09-11 09:53:25,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-09-11 09:53:25,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-11 09:53:25,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-11 09:53:26,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-11 09:53:26,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-11 09:53:26,751 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-11 09:53:26,794 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-11 09:53:26,795 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-09-11 09:53:26,795 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-11 09:53:26,799 [     scc.git] DEBUG Check current status
2024-09-11 09:53:26,799 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-11 09:53:26,803 [     scc.git] DEBUG 749a68ac Bump version: 5.19.4 → 5.19.5.dev0
2024-09-11 09:53:26,803 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-11 09:53:26,845 [  scc.config] DEBUG Found remote.origin.url
2024-09-11 09:53:27,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-09-11 09:53:27,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-11 09:53:28,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-11 09:53:28,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-11 09:53:29,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-11 09:53:29,005 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-11 09:53:29,046 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-11 09:53:29,047 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-09-11 09:53:29,047 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-11 09:53:29,053 [     scc.git] DEBUG Check current status
2024-09-11 09:53:29,053 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-11 09:53:29,057 [     scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-09-11 09:53:29,057 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-11 09:53:29,100 [  scc.config] DEBUG Found remote.origin.url
2024-09-11 09:53:29,101 [     scc.git] DEBUG Repository configuration:
base-branch: develop

2024-09-11 09:53:29,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-09-11 09:53:30,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-11 09:53:30,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-11 09:53:30,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-11 09:53:31,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-11 09:53:31,277 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-11 09:53:31,319 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-11 09:53:31,319 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-09-11 09:53:31,320 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-11 09:53:31,324 [     scc.git] DEBUG Check current status
2024-09-11 09:53:31,324 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-11 09:53:31,328 [     scc.git] DEBUG da5b7d11f Bump version: 5.27.2 → 5.27.3.dev0
2024-09-11 09:53:31,328 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-11 09:53:31,370 [  scc.config] DEBUG Found remote.origin.url
2024-09-11 09:53:31,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-09-11 09:53:32,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-11 09:53:32,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-11 09:53:33,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-11 09:53:33,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-11 09:53:33,526 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-11 09:53:33,566 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-11 09:53:33,566 [     scc.git] DEBUG Resetting...
2024-09-11 09:53:33,566 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-09-11 09:53:33,572 [     scc.git] DEBUG HEAD is now at 29f2e1f merge master -Dorg -Snone
2024-09-11 09:53:33,572 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-09-11 09:53:33,624 [     scc.git] DEBUG Check current status
2024-09-11 09:53:33,624 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-11 09:53:33,628 [     scc.git] DEBUG 29f2e1f merge master -Dorg -Snone
2024-09-11 09:53:33,629 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-11 09:53:33,668 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-09-11 09:53:33,671 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-09-11 09:53:33,675 [     scc.git] DEBUG  749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-09-11 09:53:33,679 [     scc.git] DEBUG  312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-09-11 09:53:33,682 [     scc.git] DEBUG  da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-09-11 09:53:33,683 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-09-11 09:53:33,683 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-09-11 09:53:33,683 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-09-11 09:53:33,683 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-09-11 09:53:33,683 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-09-11 09:53:33,683 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2024-09-11 09:53:33,684 [    scc.repo] DEBUG ## PRs found:
2024-09-11 09:53:33,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-09-11 09:53:33,956 [    scc.repo] DEBUG ## Branches found:
2024-09-11 09:53:33,956 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 09:53:33,956 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:53:33,960 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-11 09:53:33,964 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-11 09:53:33,964 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-11 09:53:33,969 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-11 09:53:33,973 [     scc.git] DEBUG Already up to date.

2024-09-11 09:53:33,973 [     scc.git] DEBUG ## Unique users: []
2024-09-11 09:53:33,973 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 09:53:33,973 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:53:33,977 [     scc.git] DEBUG Calling 'git submodule update'
2024-09-11 09:53:34,017 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 09:53:34,017 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:53:34,022 [    scc.repo] DEBUG ## PRs found:
2024-09-11 09:53:34,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-09-11 09:53:34,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-09-11 09:53:35,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-09-11 09:53:35,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-09-11 09:53:36,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-11 09:53:36,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-09-11 09:53:37,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-09-11 09:53:37,366 [    scc.repo] DEBUG   - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-09-11 09:53:37,366 [    scc.repo] DEBUG ## Branches found:
2024-09-11 09:53:37,366 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-09-11 09:53:37,366 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 09:53:37,366 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:53:37,370 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-11 09:53:37,374 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-11 09:53:37,374 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-11 09:53:37,378 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-11 09:53:37,383 [     scc.git] DEBUG Already up to date.

2024-09-11 09:53:37,383 [     scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-09-11 09:53:37,692 [     scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-09-11 09:53:37,693 [     scc.git] DEBUG  * branch            refs/pull/16/head -> FETCH_HEAD
2024-09-11 09:53:37,697 [     scc.git] DEBUG ## Unique users: []
2024-09-11 09:53:37,697 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 09:53:37,697 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:53:37,702 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-09-11 09:53:37,707 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:53:37,710 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-09-11 09:53:37,753 [     scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-09-11 09:53:37,753 [     scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-09-11 09:53:37,753 [     scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-09-11 09:53:37,753 [     scc.git] DEBUG Auto-merging src/fsLists.py
2024-09-11 09:53:37,753 [     scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-09-11 09:53:37,753 [     scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-09-11 09:53:37,753 [     scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-09-11 09:53:37,753 [     scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-09-11 09:53:37,753 [     scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-09-11 09:53:37,753 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-11 09:53:37,757 [     scc.git] DEBUG  src/fsAbstractPlatformMonitor.py |  6 +++---
2024-09-11 09:53:37,757 [     scc.git] DEBUG  src/fsDirectory.py               | 46 ++++++++++++++++++++--------------------
2024-09-11 09:53:37,757 [     scc.git] DEBUG  src/fsDropBox.py                 | 24 ++++++++++-----------
2024-09-11 09:53:37,757 [     scc.git] DEBUG  src/fsLists.py                   | 14 ++++++------
2024-09-11 09:53:37,757 [     scc.git] DEBUG  src/fsMac-10-5-Monitor.py        | 10 ++++-----
2024-09-11 09:53:37,757 [     scc.git] DEBUG  src/fsMonitor.py                 | 24 ++++++++++-----------
2024-09-11 09:53:37,757 [     scc.git] DEBUG  src/fsMonitorServer.py           | 10 ++++-----
2024-09-11 09:53:37,757 [     scc.git] DEBUG  src/fsPyinotifyMonitor.py        |  8 +++----
2024-09-11 09:53:37,757 [     scc.git] DEBUG  src/fsWin-XP-Monitor.py          | 20 ++++++++---------
2024-09-11 09:53:37,757 [     scc.git] DEBUG  9 files changed, 81 insertions(+), 81 deletions(-)
2024-09-11 09:53:37,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 09:53:37,915 [     scc.git] DEBUG Calling 'git submodule update'
2024-09-11 09:53:37,955 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 09:53:37,956 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:53:37,959 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-11 09:53:37,998 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-09-11 09:53:38,005 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f1639b46c70> has no local changes
2024-09-11 09:53:38,005 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-dropbox
Already up to date.

Merged PRs:
  - PR 16 joshmoore 'Review all instances of whitelist/blacklist'

Generated by OMERO-python-superbuild-push#169 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/169/)'
2024-09-11 09:53:38,012 [     scc.git] DEBUG [detached HEAD 013cf5a] merge master -Dorg -Ssuccess-only
2024-09-11 09:53:38,012 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-11 09:53:38,013 [    scc.repo] DEBUG ## PRs found:
2024-09-11 09:53:38,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-09-11 09:53:38,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-09-11 09:53:39,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-09-11 09:53:39,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-09-11 09:53:40,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-11 09:53:40,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-09-11 09:53:41,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-09-11 09:53:41,225 [    scc.repo] DEBUG   - PR 69 will-moore 'Roi encoder allows Shape None'
2024-09-11 09:53:41,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-09-11 09:53:42,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-09-11 09:53:42,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-09-11 09:53:43,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-09-11 09:53:43,123 [    scc.repo] DEBUG ## Branches found:
2024-09-11 09:53:43,124 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-09-11 09:53:43,124 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 09:53:43,124 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:53:43,128 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-11 09:53:43,132 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-11 09:53:43,132 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-11 09:53:43,136 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-11 09:53:43,140 [     scc.git] DEBUG Already up to date.

2024-09-11 09:53:43,140 [     scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-09-11 09:53:43,503 [     scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-09-11 09:53:43,503 [     scc.git] DEBUG  * branch            refs/pull/69/head -> FETCH_HEAD
2024-09-11 09:53:43,508 [     scc.git] DEBUG ## Unique users: []
2024-09-11 09:53:43,508 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 09:53:43,508 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:53:43,512 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-09-11 09:53:43,516 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:53:43,520 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-09-11 09:53:43,530 [     scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-09-11 09:53:43,531 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-11 09:53:43,534 [     scc.git] DEBUG  omero_marshal/encode/encoders/roi.py | 5 +++--
2024-09-11 09:53:43,534 [     scc.git] DEBUG  tests/unit/conftest.py               | 5 ++++-
2024-09-11 09:53:43,534 [     scc.git] DEBUG  2 files changed, 7 insertions(+), 3 deletions(-)
2024-09-11 09:53:43,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 09:53:43,686 [     scc.git] DEBUG Calling 'git submodule update'
2024-09-11 09:53:43,721 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 09:53:43,722 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:53:43,725 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-11 09:53:43,761 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-09-11 09:53:43,767 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f1638a64730> has no local changes
2024-09-11 09:53:43,767 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-marshal
Excluded PRs:
  - PR 34 chris-allan 'Initial support for Event' (exclude comment)
  - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.

Merged PRs:
  - PR 69 will-moore 'Roi encoder allows Shape None'

Generated by OMERO-python-superbuild-push#169 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/169/)'
2024-09-11 09:53:43,774 [     scc.git] DEBUG [detached HEAD b3ab6ee] merge master -Dorg -Ssuccess-only
2024-09-11 09:53:43,774 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-11 09:53:43,774 [    scc.repo] DEBUG ## PRs found:
2024-09-11 09:53:44,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-09-11 09:53:44,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None
2024-09-11 09:53:45,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None
2024-09-11 09:53:45,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/424 HTTP/1.1" 200 None
2024-09-11 09:53:46,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/424/comments HTTP/1.1" 200 None
2024-09-11 09:53:47,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0f8fe1cf7fd80f6bdaa7788a5f0b15dcb6d542ec HTTP/1.1" 200 None
2024-09-11 09:53:47,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0f8fe1cf7fd80f6bdaa7788a5f0b15dcb6d542ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-11 09:53:47,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0f8fe1cf7fd80f6bdaa7788a5f0b15dcb6d542ec/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-11 09:53:48,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0f8fe1cf7fd80f6bdaa7788a5f0b15dcb6d542ec HTTP/1.1" 200 None
2024-09-11 09:53:48,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0f8fe1cf7fd80f6bdaa7788a5f0b15dcb6d542ec?per_page=1 HTTP/1.1" 200 None
2024-09-11 09:53:49,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0f8fe1cf7fd80f6bdaa7788a5f0b15dcb6d542ec HTTP/1.1" 200 None
2024-09-11 09:53:49,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0f8fe1cf7fd80f6bdaa7788a5f0b15dcb6d542ec/status HTTP/1.1" 200 None
2024-09-11 09:53:49,889 [    scc.repo] DEBUG   - PR 424 DavidStirling 'Prevent hang on exit while omero.client keepalive is active'
2024-09-11 09:53:50,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-09-11 09:53:50,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-09-11 09:53:51,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-09-11 09:53:51,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-11 09:53:52,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-11 09:53:52,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-09-11 09:53:53,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-09-11 09:53:53,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-09-11 09:53:54,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-09-11 09:53:54,046 [    scc.repo] DEBUG   - PR 408 jburel 'remove deprecated method'
2024-09-11 09:53:54,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-09-11 09:53:54,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-09-11 09:53:55,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-09-11 09:53:55,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-11 09:53:56,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-11 09:53:56,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-09-11 09:53:57,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-09-11 09:53:57,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-11 09:53:58,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-11 09:53:58,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-09-11 09:53:59,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-09-11 09:53:59,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-09-11 09:54:00,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-09-11 09:54:00,088 [    scc.repo] DEBUG   - PR 391 joshmoore 'Add jstack command'
2024-09-11 09:54:00,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-09-11 09:54:00,522 [    scc.repo] DEBUG   # ... Exclude label: exclude
2024-09-11 09:54:00,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-09-11 09:54:01,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-09-11 09:54:01,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-09-11 09:54:02,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-11 09:54:02,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-09-11 09:54:03,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-09-11 09:54:03,357 [    scc.repo] DEBUG   - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-09-11 09:54:03,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-09-11 09:54:04,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-09-11 09:54:04,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-09-11 09:54:05,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-11 09:54:05,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-11 09:54:06,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-09-11 09:54:06,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-09-11 09:54:07,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-09-11 09:54:07,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-09-11 09:54:07,553 [    scc.repo] DEBUG   - PR 332 jburel 'Build conda'
2024-09-11 09:54:08,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-09-11 09:54:08,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-09-11 09:54:08,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-09-11 09:54:09,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-09-11 09:54:09,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-09-11 09:54:10,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-11 09:54:10,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-09-11 09:54:11,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-09-11 09:54:11,207 [    scc.repo] DEBUG   - PR 299 joshmoore 'Add parents and children to omero obj'
2024-09-11 09:54:11,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-09-11 09:54:12,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-09-11 09:54:12,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-11 09:54:13,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-09-11 09:54:13,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-09-11 09:54:13,564 [    scc.repo] DEBUG   - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-09-11 09:54:14,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-09-11 09:54:14,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-09-11 09:54:15,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-09-11 09:54:15,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-11 09:54:16,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-09-11 09:54:16,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-09-11 09:54:16,460 [    scc.repo] DEBUG   - PR 207 manics 'BlitzGateway.connect raise on error'
2024-09-11 09:54:16,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-09-11 09:54:17,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-09-11 09:54:17,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-09-11 09:54:18,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-11 09:54:18,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-09-11 09:54:19,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-09-11 09:54:19,360 [    scc.repo] DEBUG   - PR 199 joshmoore 'user: allow setting default group'
2024-09-11 09:54:19,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-09-11 09:54:20,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-09-11 09:54:20,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-09-11 09:54:21,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-09-11 09:54:21,254 [    scc.repo] DEBUG ## Branches found:
2024-09-11 09:54:21,254 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-09-11 09:54:21,254 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 09:54:21,254 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:54:21,259 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-11 09:54:21,263 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-11 09:54:21,263 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-11 09:54:21,268 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-11 09:54:21,272 [     scc.git] DEBUG Already up to date.

2024-09-11 09:54:21,273 [     scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-09-11 09:54:22,291 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-11 09:54:22,291 [     scc.git] DEBUG  * branch              refs/pull/199/head -> FETCH_HEAD
2024-09-11 09:54:22,296 [     scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-09-11 09:54:22,591 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-11 09:54:22,591 [     scc.git] DEBUG  * branch              refs/pull/207/head -> FETCH_HEAD
2024-09-11 09:54:22,596 [     scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-09-11 09:54:22,910 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-11 09:54:22,911 [     scc.git] DEBUG  * branch              refs/pull/266/head -> FETCH_HEAD
2024-09-11 09:54:22,915 [     scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-09-11 09:54:23,229 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-11 09:54:23,230 [     scc.git] DEBUG  * branch              refs/pull/299/head -> FETCH_HEAD
2024-09-11 09:54:23,236 [     scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-09-11 09:54:23,616 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-11 09:54:23,616 [     scc.git] DEBUG  * branch              refs/pull/332/head -> FETCH_HEAD
2024-09-11 09:54:23,623 [     scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-09-11 09:54:23,909 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-11 09:54:23,909 [     scc.git] DEBUG  * branch              refs/pull/337/head -> FETCH_HEAD
2024-09-11 09:54:23,914 [     scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-09-11 09:54:24,201 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-11 09:54:24,202 [     scc.git] DEBUG  * branch              refs/pull/391/head -> FETCH_HEAD
2024-09-11 09:54:24,206 [     scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-09-11 09:54:24,516 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-11 09:54:24,516 [     scc.git] DEBUG  * branch              refs/pull/408/head -> FETCH_HEAD
2024-09-11 09:54:24,522 [     scc.git] DEBUG Calling 'git fetch origin pull/424/head'
2024-09-11 09:54:24,965 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-11 09:54:24,966 [     scc.git] DEBUG  * branch              refs/pull/424/head -> FETCH_HEAD
2024-09-11 09:54:24,970 [     scc.git] DEBUG ## Unique users: []
2024-09-11 09:54:24,971 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 09:54:24,971 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:54:24,976 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-09-11 09:54:24,988 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:54:24,993 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-09-11 09:54:25,076 [     scc.git] DEBUG Auto-merging src/omero/cli.py
2024-09-11 09:54:25,076 [     scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-09-11 09:54:25,077 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-11 09:54:25,081 [     scc.git] DEBUG  src/omero/cli.py          |  6 ++++++
2024-09-11 09:54:25,081 [     scc.git] DEBUG  src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-09-11 09:54:25,081 [     scc.git] DEBUG  2 files changed, 39 insertions(+), 3 deletions(-)
2024-09-11 09:54:25,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 09:54:25,219 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-09-11 09:54:25,231 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:54:25,235 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-09-11 09:54:25,374 [     scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-09-11 09:54:25,374 [     scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-09-11 09:54:25,374 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-11 09:54:25,382 [     scc.git] DEBUG  src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-09-11 09:54:25,382 [     scc.git] DEBUG  test/unit/test_gateway.py     | 16 ++++++++++++++++
2024-09-11 09:54:25,382 [     scc.git] DEBUG  2 files changed, 29 insertions(+), 6 deletions(-)
2024-09-11 09:54:25,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 09:54:25,614 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-09-11 09:54:25,626 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:54:25,630 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-09-11 09:54:25,717 [     scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-09-11 09:54:25,718 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-11 09:54:25,721 [     scc.git] DEBUG  src/omero/plugins/search.py | 13 +++++++++----
2024-09-11 09:54:25,721 [     scc.git] DEBUG  1 file changed, 9 insertions(+), 4 deletions(-)
2024-09-11 09:54:26,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 09:54:26,002 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-09-11 09:54:26,013 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:54:26,019 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-09-11 09:54:26,187 [     scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-09-11 09:54:26,187 [     scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-09-11 09:54:26,188 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-11 09:54:26,191 [     scc.git] DEBUG  src/omero/plugins/obj.py      | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-09-11 09:54:26,191 [     scc.git] DEBUG  test/unit/clitest/test_obj.py |  2 +-
2024-09-11 09:54:26,191 [     scc.git] DEBUG  2 files changed, 69 insertions(+), 2 deletions(-)
2024-09-11 09:54:26,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 09:54:26,400 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-09-11 09:54:26,411 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:54:26,416 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-09-11 09:54:26,467 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-11 09:54:26,470 [     scc.git] DEBUG  .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-09-11 09:54:26,470 [     scc.git] DEBUG  connect.py                    | 11 +++++++++++
2024-09-11 09:54:26,470 [     scc.git] DEBUG  2 files changed, 48 insertions(+)
2024-09-11 09:54:26,470 [     scc.git] DEBUG  create mode 100644 .github/workflows/install.yml
2024-09-11 09:54:26,470 [     scc.git] DEBUG  create mode 100644 connect.py
2024-09-11 09:54:26,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 09:54:26,791 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-09-11 09:54:26,806 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:54:26,812 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-09-11 09:54:26,856 [     scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-09-11 09:54:26,856 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-11 09:54:26,860 [     scc.git] DEBUG  src/omero/plugins/import.py | 2 ++
2024-09-11 09:54:26,860 [     scc.git] DEBUG  1 file changed, 2 insertions(+)
2024-09-11 09:54:27,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 09:54:27,189 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-09-11 09:54:27,201 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:54:27,206 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-09-11 09:54:27,456 [     scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-09-11 09:54:27,457 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-11 09:54:27,462 [     scc.git] DEBUG  src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-09-11 09:54:27,462 [     scc.git] DEBUG  1 file changed, 59 insertions(+), 2 deletions(-)
2024-09-11 09:54:27,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 09:54:27,648 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-09-11 09:54:27,659 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:54:27,663 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-09-11 09:54:27,792 [     scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-09-11 09:54:27,793 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-11 09:54:27,800 [     scc.git] DEBUG  src/omero/gateway/__init__.py | 36 ------------------------------------
2024-09-11 09:54:27,800 [     scc.git] DEBUG  1 file changed, 36 deletions(-)
2024-09-11 09:54:28,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 09:54:28,031 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...0f8fe1cf7fd80f6bdaa7788a5f0b15dcb6d542ec'
2024-09-11 09:54:28,043 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:54:28,048 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 424 (Prevent hang on exit while omero.client keepalive is active) 0f8fe1cf7fd80f6bdaa7788a5f0b15dcb6d542ec'
2024-09-11 09:54:28,070 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-11 09:54:28,073 [     scc.git] DEBUG  src/omero/util/__init__.py | 8 +-------
2024-09-11 09:54:28,073 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 7 deletions(-)
2024-09-11 09:54:28,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 09:54:28,423 [     scc.git] DEBUG Calling 'git submodule update'
2024-09-11 09:54:28,464 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 09:54:28,464 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:54:28,469 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-11 09:54:28,510 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-09-11 09:54:28,520 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f1638a645b0> has no local changes
2024-09-11 09:54:28,521 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-py
Excluded PRs:
  - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
  - PR 427 Rdornier 'Add fileset folder creation' (user: Rdornier)
  - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
  - PR 387 will-moore 'Numpy pixels type' (label: exclude)
  - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
  - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
  - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.

Merged PRs:
  - PR 199 joshmoore 'user: allow setting default group'
  - PR 207 manics 'BlitzGateway.connect raise on error'
  - PR 266 joshmoore 'errors: use raise_error from cli plugins'
  - PR 299 joshmoore 'Add parents and children to omero obj'
  - PR 332 jburel 'Build conda'
  - PR 337 will-moore 'bulk.yml depth is passed to xargs'
  - PR 391 joshmoore 'Add jstack command'
  - PR 408 jburel 'remove deprecated method'
  - PR 424 DavidStirling 'Prevent hang on exit while omero.client keepalive is active'

Generated by OMERO-python-superbuild-push#169 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/169/)'
2024-09-11 09:54:28,534 [     scc.git] DEBUG [detached HEAD 9560fbcd] merge master -Dorg -Ssuccess-only
2024-09-11 09:54:28,534 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-11 09:54:28,535 [     scc.git] INFO  Overriding base-branch from master to develop
2024-09-11 09:54:28,535 [    scc.repo] DEBUG ## PRs found:
2024-09-11 09:54:29,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-09-11 09:54:29,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-09-11 09:54:30,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-09-11 09:54:30,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-09-11 09:54:31,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-09-11 09:54:31,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-09-11 09:54:31,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-09-11 09:54:32,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-09-11 09:54:32,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-11 09:54:33,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-09-11 09:54:33,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-09-11 09:54:33,853 [    scc.repo] DEBUG   - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-09-11 09:54:34,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-09-11 09:54:34,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-09-11 09:54:35,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-09-11 09:54:35,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-09-11 09:54:35,736 [    scc.repo] DEBUG ## Branches found:
2024-09-11 09:54:35,736 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-09-11 09:54:35,736 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 09:54:35,736 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:54:35,742 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-09-11 09:54:35,746 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-11 09:54:35,746 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-09-11 09:54:35,752 [     scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-09-11 09:54:35,757 [     scc.git] DEBUG Already up to date.

2024-09-11 09:54:35,758 [     scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-09-11 09:54:36,144 [     scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-09-11 09:54:36,144 [     scc.git] DEBUG  * branch            refs/pull/202/head -> FETCH_HEAD
2024-09-11 09:54:36,149 [     scc.git] DEBUG ## Unique users: []
2024-09-11 09:54:36,149 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 09:54:36,149 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:54:36,155 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-09-11 09:54:36,162 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:54:36,166 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-09-11 09:54:36,205 [     scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-09-11 09:54:36,205 [     scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-09-11 09:54:36,205 [     scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-09-11 09:54:36,205 [     scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-09-11 09:54:36,210 [     scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-09-11 09:54:36,216 [     scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-09-11 09:54:36,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 09:54:36,350 [     scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-09-11 09:54:36,358 [     scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-09-11 09:54:36,363 [     scc.git] INFO    - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#169](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/169/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/169/consoleText) for more details.
Possible conflicts:
  - Upstream changes
    - omero/annotation_scripts/KeyVal_to_csv.py

--conflicts

2024-09-11 09:54:36,367 [  scc.config] DEBUG Found github.token
2024-09-11 09:54:36,367 [     scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-09-11 09:54:36,368 [     scc.git] DEBUG Calling 'git submodule update'
2024-09-11 09:54:36,406 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 09:54:36,406 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:54:36,410 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-11 09:54:36,450 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-09-11 09:54:36,456 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f1638adac70> has no local changes
2024-09-11 09:54:36,457 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-scripts
Excluded PRs:
  - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
  - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
  - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
  - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.

Conflicting PRs (not included):
  - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'

Generated by OMERO-python-superbuild-push#169 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/169/)'
2024-09-11 09:54:36,469 [     scc.git] DEBUG [detached HEAD 05c9ad4] merge master -Dorg -Ssuccess-only
2024-09-11 09:54:36,469 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-11 09:54:36,470 [    scc.repo] DEBUG ## PRs found:
2024-09-11 09:54:37,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-09-11 09:54:37,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568 HTTP/1.1" 200 None
2024-09-11 09:54:37,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568/comments HTTP/1.1" 200 None
2024-09-11 09:54:38,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-09-11 09:54:38,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-09-11 09:54:39,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-09-11 09:54:39,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-09-11 09:54:40,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-09-11 09:54:40,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-11 09:54:41,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-11 09:54:41,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-09-11 09:54:42,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-09-11 09:54:42,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-09-11 09:54:43,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-09-11 09:54:43,172 [    scc.repo] DEBUG   - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-09-11 09:54:43,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-09-11 09:54:44,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-09-11 09:54:44,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-09-11 09:54:45,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-11 09:54:45,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-11 09:54:46,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-09-11 09:54:46,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-09-11 09:54:46,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-09-11 09:54:47,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-09-11 09:54:47,391 [    scc.repo] DEBUG   - PR 527 will-moore 'Add some initial CSP settings to test'
2024-09-11 09:54:47,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-09-11 09:54:48,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-09-11 09:54:48,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-09-11 09:54:49,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-11 09:54:49,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-11 09:54:49,769 [    scc.repo] DEBUG ## Branches found:
2024-09-11 09:54:49,769 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-09-11 09:54:49,769 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 09:54:49,769 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:54:49,776 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-11 09:54:49,780 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-11 09:54:49,780 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-11 09:54:49,785 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-11 09:54:49,791 [     scc.git] DEBUG Already up to date.

2024-09-11 09:54:49,791 [     scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-09-11 09:54:50,265 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-09-11 09:54:50,266 [     scc.git] DEBUG  * branch                refs/pull/527/head -> FETCH_HEAD
2024-09-11 09:54:50,272 [     scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-09-11 09:54:50,591 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-09-11 09:54:50,591 [     scc.git] DEBUG  * branch                refs/pull/534/head -> FETCH_HEAD
2024-09-11 09:54:50,597 [     scc.git] DEBUG ## Unique users: []
2024-09-11 09:54:50,597 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 09:54:50,597 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:54:50,604 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-09-11 09:54:50,612 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:54:50,617 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-09-11 09:54:50,673 [     scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-09-11 09:54:50,673 [     scc.git] DEBUG Auto-merging setup.py
2024-09-11 09:54:50,674 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-11 09:54:50,678 [     scc.git] DEBUG  omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-09-11 09:54:50,678 [     scc.git] DEBUG  setup.py             |  1 +
2024-09-11 09:54:50,678 [     scc.git] DEBUG  2 files changed, 42 insertions(+), 1 deletion(-)
2024-09-11 09:54:50,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 09:54:50,809 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-09-11 09:54:50,818 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:54:50,822 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-09-11 09:54:50,845 [     scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-09-11 09:54:50,845 [     scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-09-11 09:54:50,846 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-11 09:54:50,850 [     scc.git] DEBUG  omeroweb/webclient/webclient_gateway.py | 2 +-
2024-09-11 09:54:50,850 [     scc.git] DEBUG  omeroweb/webgateway/marshal.py          | 4 ++--
2024-09-11 09:54:50,850 [     scc.git] DEBUG  2 files changed, 3 insertions(+), 3 deletions(-)
2024-09-11 09:54:51,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 09:54:51,199 [     scc.git] DEBUG Calling 'git submodule update'
2024-09-11 09:54:51,249 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 09:54:51,249 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 09:54:51,254 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-11 09:54:51,298 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-09-11 09:54:51,309 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f1638226d60> has no local changes
2024-09-11 09:54:51,310 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-web
Excluded PRs:
  - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
  - PR 535 will-moore 'Initial working browser history' (stage: draft)
  - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.

Merged PRs:
  - PR 527 will-moore 'Add some initial CSP settings to test'
  - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'

Generated by OMERO-python-superbuild-push#169 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/169/)'
2024-09-11 09:54:51,321 [     scc.git] DEBUG [detached HEAD e1e4517d0] merge master -Dorg -Ssuccess-only
2024-09-11 09:54:51,321 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-11 09:54:51,322 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-11 09:54:51,373 [  scc.config] DEBUG Found submodule.omero-dropbox.url
2024-09-11 09:54:51,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 09:54:51,605 [  scc.config] DEBUG Found submodule.omero-marshal.url
2024-09-11 09:54:51,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 09:54:52,008 [  scc.config] DEBUG Found submodule.omero-py.url
2024-09-11 09:54:52,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 09:54:52,388 [  scc.config] DEBUG Found submodule.omero-scripts.url
2024-09-11 09:54:52,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 09:54:52,784 [  scc.config] DEBUG Found submodule.omero-web.url
2024-09-11 09:54:53,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 09:54:53,201 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-09-11 09:54:53,246 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f163a867e20> has local changes
2024-09-11 09:54:53,246 [     scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-python-superbuild
Already up to date.


Repository: ome/omero-dropbox
Already up to date.

Merged PRs:
  - PR 16 joshmoore 'Review all instances of whitelist/blacklist'

Repository: ome/omero-marshal
Excluded PRs:
  - PR 34 chris-allan 'Initial support for Event' (exclude comment)
  - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.

Merged PRs:
  - PR 69 will-moore 'Roi encoder allows Shape None'

Repository: ome/omero-py
Excluded PRs:
  - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
  - PR 427 Rdornier 'Add fileset folder creation' (user: Rdornier)
  - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
  - PR 387 will-moore 'Numpy pixels type' (label: exclude)
  - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
  - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
  - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.

Merged PRs:
  - PR 199 joshmoore 'user: allow setting default group'
  - PR 207 manics 'BlitzGateway.connect raise on error'
  - PR 266 joshmoore 'errors: use raise_error from cli plugins'
  - PR 299 joshmoore 'Add parents and children to omero obj'
  - PR 332 jburel 'Build conda'
  - PR 337 will-moore 'bulk.yml depth is passed to xargs'
  - PR 391 joshmoore 'Add jstack command'
  - PR 408 jburel 'remove deprecated method'
  - PR 424 DavidStirling 'Prevent hang on exit while omero.client keepalive is active'

Repository: ome/omero-scripts
Excluded PRs:
  - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
  - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
  - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
  - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.

Conflicting PRs (not included):
  - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'

Repository: ome/omero-web
Excluded PRs:
  - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
  - PR 535 will-moore 'Initial working browser history' (stage: draft)
  - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.

Merged PRs:
  - PR 527 will-moore 'Add some initial CSP settings to test'
  - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'

Generated by OMERO-python-superbuild-push#169 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/169/)'
2024-09-11 09:54:53,265 [     scc.git] DEBUG [detached HEAD 0a74d50] merge master -Dorg -Ssuccess-only
2024-09-11 09:54:53,266 [   scc.merge] INFO  Repository: ome/omero-python-superbuild
2024-09-11 09:54:53,266 [     scc.git] DEBUG  6 files changed, 10 insertions(+), 10 deletions(-)
2024-09-11 09:54:53,266 [   scc.merge] INFO  Already up to date.
2024-09-11 09:54:53,267 [   scc.merge] INFO  
2024-09-11 09:54:53,267 [   scc.merge] INFO  
2024-09-11 09:54:53,267 [   scc.merge] INFO  Repository: ome/omero-dropbox
2024-09-11 09:54:53,267 [   scc.merge] INFO  Already up to date.
2024-09-11 09:54:53,267 [   scc.merge] INFO  
2024-09-11 09:54:53,267 [   scc.merge] INFO  Merged PRs:
2024-09-11 09:54:53,267 [   scc.merge] INFO    - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-09-11 09:54:53,267 [   scc.merge] INFO  
2024-09-11 09:54:53,267 [   scc.merge] INFO  Repository: ome/omero-marshal
2024-09-11 09:54:53,267 [   scc.merge] INFO  Excluded PRs:
2024-09-11 09:54:53,267 [   scc.merge] INFO    - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-09-11 09:54:53,267 [   scc.merge] INFO    - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-09-11 09:54:53,267 [   scc.merge] INFO  Already up to date.
2024-09-11 09:54:53,267 [   scc.merge] INFO  
2024-09-11 09:54:53,267 [   scc.merge] INFO  Merged PRs:
2024-09-11 09:54:53,267 [   scc.merge] INFO    - PR 69 will-moore 'Roi encoder allows Shape None'
2024-09-11 09:54:53,267 [   scc.merge] INFO  
2024-09-11 09:54:53,267 [   scc.merge] INFO  Repository: ome/omero-py
2024-09-11 09:54:53,267 [   scc.merge] INFO  Excluded PRs:
2024-09-11 09:54:53,267 [   scc.merge] INFO    - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
2024-09-11 09:54:53,267 [   scc.merge] INFO    - PR 427 Rdornier 'Add fileset folder creation' (user: Rdornier)
2024-09-11 09:54:53,267 [   scc.merge] INFO    - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-09-11 09:54:53,267 [   scc.merge] INFO    - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-09-11 09:54:53,267 [   scc.merge] INFO    - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-09-11 09:54:53,267 [   scc.merge] INFO    - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-09-11 09:54:53,267 [   scc.merge] INFO    - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-09-11 09:54:53,267 [   scc.merge] INFO  Already up to date.
2024-09-11 09:54:53,267 [   scc.merge] INFO  
2024-09-11 09:54:53,267 [   scc.merge] INFO  Merged PRs:
2024-09-11 09:54:53,267 [   scc.merge] INFO    - PR 199 joshmoore 'user: allow setting default group'
2024-09-11 09:54:53,267 [   scc.merge] INFO    - PR 207 manics 'BlitzGateway.connect raise on error'
2024-09-11 09:54:53,267 [   scc.merge] INFO    - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-09-11 09:54:53,268 [   scc.merge] INFO    - PR 299 joshmoore 'Add parents and children to omero obj'
2024-09-11 09:54:53,268 [   scc.merge] INFO    - PR 332 jburel 'Build conda'
2024-09-11 09:54:53,268 [   scc.merge] INFO    - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-09-11 09:54:53,268 [   scc.merge] INFO    - PR 391 joshmoore 'Add jstack command'
2024-09-11 09:54:53,268 [   scc.merge] INFO    - PR 408 jburel 'remove deprecated method'
2024-09-11 09:54:53,268 [   scc.merge] INFO    - PR 424 DavidStirling 'Prevent hang on exit while omero.client keepalive is active'
2024-09-11 09:54:53,268 [   scc.merge] INFO  
2024-09-11 09:54:53,268 [   scc.merge] INFO  Repository: ome/omero-scripts
2024-09-11 09:54:53,268 [   scc.merge] INFO  Excluded PRs:
2024-09-11 09:54:53,268 [   scc.merge] INFO    - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-09-11 09:54:53,268 [   scc.merge] INFO    - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-09-11 09:54:53,268 [   scc.merge] INFO    - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-09-11 09:54:53,268 [   scc.merge] INFO    - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-09-11 09:54:53,268 [   scc.merge] INFO  Already up to date.
2024-09-11 09:54:53,268 [   scc.merge] INFO  
2024-09-11 09:54:53,268 [   scc.merge] INFO  Conflicting PRs (not included):
2024-09-11 09:54:53,268 [   scc.merge] INFO    - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-09-11 09:54:53,268 [   scc.merge] INFO  
2024-09-11 09:54:53,268 [   scc.merge] INFO  Repository: ome/omero-web
2024-09-11 09:54:53,268 [   scc.merge] INFO  Excluded PRs:
2024-09-11 09:54:53,268 [   scc.merge] INFO    - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
2024-09-11 09:54:53,268 [   scc.merge] INFO    - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-09-11 09:54:53,268 [   scc.merge] INFO    - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-09-11 09:54:53,268 [   scc.merge] INFO  Already up to date.
2024-09-11 09:54:53,268 [   scc.merge] INFO  
2024-09-11 09:54:53,268 [   scc.merge] INFO  Merged PRs:
2024-09-11 09:54:53,268 [   scc.merge] INFO    - PR 527 will-moore 'Add some initial CSP settings to test'
2024-09-11 09:54:53,268 [   scc.merge] INFO    - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-09-11 09:54:53,268 [   scc.merge] INFO  
2024-09-11 09:54:53,268 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-09-11 09:54:53,269 [     scc.git] DEBUG Calling 'git remote'
2024-09-11 09:54:53,277 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-09-11 09:54:53,277 [     scc.git] DEBUG Calling 'git remote'
2024-09-11 09:54:53,285 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-11 09:54:53,285 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-09-11 09:54:53,285 [     scc.git] DEBUG Calling 'git remote'
2024-09-11 09:54:53,293 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-11 09:54:53,294 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-09-11 09:54:53,294 [     scc.git] DEBUG Calling 'git remote'
2024-09-11 09:54:53,300 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-11 09:54:53,301 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-09-11 09:54:53,301 [     scc.git] DEBUG Calling 'git remote'
2024-09-11 09:54:53,308 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-11 09:54:53,308 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-09-11 09:54:53,308 [     scc.git] DEBUG Calling 'git remote'
2024-09-11 09:54:53,313 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
    download_blitz_target()
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
    resp = urlopen(loc)
  File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
    return opener.open(url, data, timeout)
  File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
    response = meth(req, response)
  File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
    response = self.parent.error(
  File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
    return self._call_chain(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
    result = func(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
    raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
    download_blitz_target()
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
    resp = urlopen(loc)
  File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
    return opener.open(url, data, timeout)
  File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
    response = meth(req, response)
  File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
    response = self.parent.error(
  File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
    return self._call_chain(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
    result = func(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
    raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 749a68ac
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from da5b7d11f
nothing to commit, working tree clean
HEAD detached from e849d72
nothing to commit, working tree clean
2024-09-11 09:55:21,296 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci