Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-09-20 16:12:24,980 [ scc.config] DEBUG Found github.token
2024-09-20 16:12:24,984 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-09-20 16:12:25,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:12:25,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:12:25,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-09-20 16:12:25,944 [ scc.gh] DEBUG 4626 remaining from 5000 (Reset at 16:09
2024-09-20 16:12:25,945 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-20 16:12:25,949 [ scc.git] DEBUG Check current status
2024-09-20 16:12:25,949 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-20 16:12:25,952 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-09-20 16:12:25,953 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-20 16:12:25,994 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-09-20 16:12:25,998 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-09-20 16:12:26,002 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-09-20 16:12:26,006 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-09-20 16:12:26,010 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-09-20 16:12:26,014 [ scc.config] DEBUG Found remote.origin.url
2024-09-20 16:12:26,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-09-20 16:12:26,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-20 16:12:27,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-20 16:12:27,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-20 16:12:28,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-20 16:12:28,152 [ scc.git] DEBUG Resetting...
2024-09-20 16:12:28,153 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-09-20 16:12:28,163 [ scc.git] DEBUG HEAD is now at e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-09-20 16:12:28,163 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-09-20 16:12:28,227 [ scc.git] DEBUG Check current status
2024-09-20 16:12:28,227 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-20 16:12:28,232 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-09-20 16:12:28,233 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-20 16:12:28,272 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-09-20 16:12:28,275 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-09-20 16:12:28,278 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-09-20 16:12:28,282 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-09-20 16:12:28,287 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-09-20 16:12:28,289 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-09-20 16:12:28,289 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-09-20 16:12:28,289 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-09-20 16:12:28,289 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-09-20 16:12:28,289 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-09-20 16:12:28,290 [ scc.repo] DEBUG ## PRs found:
2024-09-20 16:12:28,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-09-20 16:12:29,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-09-20 16:12:29,136 [ scc.repo] DEBUG # ... Include label: dependencies
2024-09-20 16:12:29,136 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-09-20 16:12:29,136 [ scc.repo] DEBUG ## Branches found:
2024-09-20 16:12:29,136 [ scc.git] DEBUG Get sha1 of %s
2024-09-20 16:12:29,136 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:12:29,140 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-20 16:12:29,144 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-20 16:12:29,144 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-20 16:12:29,148 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-20 16:12:29,152 [ scc.git] DEBUG Already up to date.
2024-09-20 16:12:29,153 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-09-20 16:12:29,512 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-09-20 16:12:29,512 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-09-20 16:12:29,517 [ scc.git] DEBUG ## Unique users: []
2024-09-20 16:12:29,518 [ scc.git] DEBUG Get sha1 of %s
2024-09-20 16:12:29,518 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:12:29,522 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-09-20 16:12:29,527 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:12:29,530 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-09-20 16:12:29,539 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-20 16:12:29,541 [ scc.git] DEBUG omero-py | 2 +-
2024-09-20 16:12:29,542 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-09-20 16:12:29,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:12:29,680 [ scc.git] DEBUG Calling 'git submodule update'
2024-09-20 16:12:29,766 [ scc.git] DEBUG Submodule path 'omero-py': checked out '4fd72efaa8cdbec9da98e1d28678af16878a86ba'
2024-09-20 16:12:29,767 [ scc.git] DEBUG Get sha1 of %s
2024-09-20 16:12:29,767 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:12:29,771 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-09-20 16:12:29,907 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f611bb170a0> has no local changes
2024-09-20 16:12:29,907 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Generated by OMERO-python-superbuild-push#179 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/179/)'
2024-09-20 16:12:29,932 [ scc.git] DEBUG [detached HEAD 00a02ac] merge master -Dorg -Snone
2024-09-20 16:12:29,932 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-09-20 16:12:29,932 [ scc.merge] INFO Already up to date.
2024-09-20 16:12:29,932 [ scc.merge] INFO
2024-09-20 16:12:29,932 [ scc.merge] INFO Merged PRs:
2024-09-20 16:12:29,932 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-09-20 16:12:29,932 [ scc.merge] INFO
2024-09-20 16:12:29,932 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-09-20 16:12:29,932 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-09-20 16:12:32,224 [ scc.config] DEBUG Found github.token
2024-09-20 16:12:32,227 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-09-20 16:12:32,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:12:32,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:12:33,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-09-20 16:12:33,245 [ scc.gh] DEBUG 4616 remaining from 5000 (Reset at 16:09
2024-09-20 16:12:33,246 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-20 16:12:33,249 [ scc.git] DEBUG Check current status
2024-09-20 16:12:33,250 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-20 16:12:33,253 [ scc.git] DEBUG 00a02ac merge master -Dorg -Snone
2024-09-20 16:12:33,253 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-20 16:12:33,292 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-09-20 16:12:33,295 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-09-20 16:12:33,299 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-09-20 16:12:33,303 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-09-20 16:12:33,307 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-09-20 16:12:33,311 [ scc.config] DEBUG Found remote.origin.url
2024-09-20 16:12:33,312 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-09-20 16:12:33,313 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-09-20 16:12:33,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-09-20 16:12:34,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-20 16:12:34,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-20 16:12:35,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-20 16:12:35,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-20 16:12:35,450 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-20 16:12:35,494 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-09-20 16:12:35,494 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-20 16:12:35,497 [ scc.git] DEBUG Check current status
2024-09-20 16:12:35,497 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-20 16:12:35,501 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-09-20 16:12:35,501 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-20 16:12:35,539 [ scc.config] DEBUG Found remote.origin.url
2024-09-20 16:12:35,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-09-20 16:12:36,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-20 16:12:36,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-20 16:12:37,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-20 16:12:37,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-20 16:12:37,651 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-20 16:12:37,691 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-20 16:12:37,693 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-09-20 16:12:37,693 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-20 16:12:37,696 [ scc.git] DEBUG Check current status
2024-09-20 16:12:37,696 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-20 16:12:37,700 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-09-20 16:12:37,700 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-20 16:12:37,741 [ scc.config] DEBUG Found remote.origin.url
2024-09-20 16:12:38,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-09-20 16:12:38,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-20 16:12:38,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-20 16:12:39,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-20 16:12:39,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-20 16:12:39,765 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-20 16:12:39,811 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-20 16:12:39,812 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-09-20 16:12:39,812 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-20 16:12:39,815 [ scc.git] DEBUG Check current status
2024-09-20 16:12:39,815 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-20 16:12:39,819 [ scc.git] DEBUG 4fd72efa Bump version: 5.19.5 → 5.19.6.dev0
2024-09-20 16:12:39,819 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-20 16:12:39,858 [ scc.config] DEBUG Found remote.origin.url
2024-09-20 16:12:40,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-09-20 16:12:40,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-20 16:12:41,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-20 16:12:41,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-20 16:12:41,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-20 16:12:41,976 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-20 16:12:42,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-20 16:12:42,015 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-09-20 16:12:42,015 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-20 16:12:42,018 [ scc.git] DEBUG Check current status
2024-09-20 16:12:42,019 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-20 16:12:42,022 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-09-20 16:12:42,022 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-20 16:12:42,062 [ scc.config] DEBUG Found remote.origin.url
2024-09-20 16:12:42,062 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-09-20 16:12:42,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-09-20 16:12:42,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-20 16:12:43,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-20 16:12:43,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-20 16:12:44,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-20 16:12:44,129 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-20 16:12:44,165 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-20 16:12:44,167 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-09-20 16:12:44,167 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-20 16:12:44,171 [ scc.git] DEBUG Check current status
2024-09-20 16:12:44,172 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-20 16:12:44,176 [ scc.git] DEBUG da5b7d11f Bump version: 5.27.2 → 5.27.3.dev0
2024-09-20 16:12:44,176 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-20 16:12:44,217 [ scc.config] DEBUG Found remote.origin.url
2024-09-20 16:12:44,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-09-20 16:12:45,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-20 16:12:45,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-20 16:12:45,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-20 16:12:46,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-20 16:12:46,333 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-20 16:12:46,374 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-20 16:12:46,374 [ scc.git] DEBUG Resetting...
2024-09-20 16:12:46,375 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-09-20 16:12:46,381 [ scc.git] DEBUG HEAD is now at 00a02ac merge master -Dorg -Snone
2024-09-20 16:12:46,381 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-09-20 16:12:46,432 [ scc.git] DEBUG Check current status
2024-09-20 16:12:46,432 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-20 16:12:46,437 [ scc.git] DEBUG 00a02ac merge master -Dorg -Snone
2024-09-20 16:12:46,437 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-20 16:12:46,477 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-09-20 16:12:46,479 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-09-20 16:12:46,483 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-09-20 16:12:46,486 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-09-20 16:12:46,490 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-09-20 16:12:46,491 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-09-20 16:12:46,491 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-09-20 16:12:46,491 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-09-20 16:12:46,491 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-09-20 16:12:46,491 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-09-20 16:12:46,491 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-09-20 16:12:46,491 [ scc.repo] DEBUG ## PRs found:
2024-09-20 16:12:46,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-09-20 16:12:47,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-09-20 16:12:47,286 [ scc.repo] DEBUG # ... Include label: dependencies
2024-09-20 16:12:47,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-09-20 16:12:48,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-20 16:12:48,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-09-20 16:12:49,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/9660559833988d271074de56e54f2462a7be74e9?per_page=1 HTTP/1.1" 200 2
2024-09-20 16:12:49,286 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-09-20 16:12:49,286 [ scc.repo] DEBUG ## Branches found:
2024-09-20 16:12:49,286 [ scc.git] DEBUG Get sha1 of %s
2024-09-20 16:12:49,286 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:12:49,290 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-20 16:12:49,293 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-20 16:12:49,294 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-20 16:12:49,298 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-20 16:12:49,302 [ scc.git] DEBUG Already up to date.
2024-09-20 16:12:49,302 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-09-20 16:12:49,623 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-09-20 16:12:49,623 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-09-20 16:12:49,628 [ scc.git] DEBUG ## Unique users: []
2024-09-20 16:12:49,629 [ scc.git] DEBUG Get sha1 of %s
2024-09-20 16:12:49,629 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:12:49,632 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-09-20 16:12:49,637 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:12:49,641 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-09-20 16:12:49,645 [ scc.git] DEBUG Already up to date.
2024-09-20 16:12:49,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:12:49,784 [ scc.git] DEBUG Calling 'git submodule update'
2024-09-20 16:12:49,822 [ scc.git] DEBUG Get sha1 of %s
2024-09-20 16:12:49,822 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:12:49,826 [ scc.repo] DEBUG ## PRs found:
2024-09-20 16:12:50,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-09-20 16:12:50,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-09-20 16:12:51,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-09-20 16:12:51,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-09-20 16:12:52,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-20 16:12:52,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-09-20 16:12:53,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-09-20 16:12:53,080 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-09-20 16:12:53,081 [ scc.repo] DEBUG ## Branches found:
2024-09-20 16:12:53,081 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-09-20 16:12:53,081 [ scc.git] DEBUG Get sha1 of %s
2024-09-20 16:12:53,081 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:12:53,085 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-20 16:12:53,089 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-20 16:12:53,090 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-20 16:12:53,094 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-20 16:12:53,099 [ scc.git] DEBUG Already up to date.
2024-09-20 16:12:53,099 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-09-20 16:12:53,446 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-09-20 16:12:53,447 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-09-20 16:12:53,451 [ scc.git] DEBUG ## Unique users: []
2024-09-20 16:12:53,451 [ scc.git] DEBUG Get sha1 of %s
2024-09-20 16:12:53,451 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:12:53,455 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-09-20 16:12:53,461 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:12:53,465 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-09-20 16:12:53,590 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-09-20 16:12:53,591 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-09-20 16:12:53,591 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-09-20 16:12:53,591 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-09-20 16:12:53,591 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-09-20 16:12:53,591 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-09-20 16:12:53,591 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-09-20 16:12:53,591 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-09-20 16:12:53,591 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-09-20 16:12:53,592 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-20 16:12:53,595 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-09-20 16:12:53,595 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-09-20 16:12:53,595 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-09-20 16:12:53,595 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-09-20 16:12:53,595 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-09-20 16:12:53,595 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-09-20 16:12:53,596 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-09-20 16:12:53,596 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-09-20 16:12:53,596 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-09-20 16:12:53,596 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-09-20 16:12:53,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:12:53,736 [ scc.git] DEBUG Calling 'git submodule update'
2024-09-20 16:12:53,774 [ scc.git] DEBUG Get sha1 of %s
2024-09-20 16:12:53,774 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:12:53,779 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-20 16:12:53,817 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-09-20 16:12:53,823 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd22adbbfa0> has no local changes
2024-09-20 16:12:53,824 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#179 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/179/)'
2024-09-20 16:12:53,832 [ scc.git] DEBUG [detached HEAD 6113450] merge master -Dorg -Ssuccess-only
2024-09-20 16:12:53,832 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-20 16:12:53,833 [ scc.repo] DEBUG ## PRs found:
2024-09-20 16:12:54,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-09-20 16:12:54,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-09-20 16:12:55,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-09-20 16:12:55,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-09-20 16:12:56,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-20 16:12:56,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-09-20 16:12:57,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-09-20 16:12:57,099 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-09-20 16:12:57,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-09-20 16:12:58,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-09-20 16:12:58,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-09-20 16:12:58,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-09-20 16:12:58,893 [ scc.repo] DEBUG ## Branches found:
2024-09-20 16:12:58,894 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-09-20 16:12:58,894 [ scc.git] DEBUG Get sha1 of %s
2024-09-20 16:12:58,894 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:12:58,898 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-20 16:12:58,902 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-20 16:12:58,902 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-20 16:12:58,907 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-20 16:12:58,911 [ scc.git] DEBUG Already up to date.
2024-09-20 16:12:58,911 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-09-20 16:12:59,367 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-09-20 16:12:59,368 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-09-20 16:12:59,372 [ scc.git] DEBUG ## Unique users: []
2024-09-20 16:12:59,372 [ scc.git] DEBUG Get sha1 of %s
2024-09-20 16:12:59,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:12:59,377 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-09-20 16:12:59,382 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:12:59,386 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-09-20 16:12:59,396 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-09-20 16:12:59,396 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-20 16:12:59,399 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-09-20 16:12:59,399 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-09-20 16:12:59,399 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-09-20 16:12:59,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:12:59,541 [ scc.git] DEBUG Calling 'git submodule update'
2024-09-20 16:12:59,580 [ scc.git] DEBUG Get sha1 of %s
2024-09-20 16:12:59,580 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:12:59,584 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-20 16:12:59,621 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-09-20 16:12:59,627 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd22adbbca0> has no local changes
2024-09-20 16:12:59,627 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#179 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/179/)'
2024-09-20 16:12:59,635 [ scc.git] DEBUG [detached HEAD 6ffcd79] merge master -Dorg -Ssuccess-only
2024-09-20 16:12:59,636 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-20 16:12:59,636 [ scc.repo] DEBUG ## PRs found:
2024-09-20 16:13:00,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-09-20 16:13:00,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/430 HTTP/1.1" 200 None
2024-09-20 16:13:01,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/430/comments HTTP/1.1" 200 None
2024-09-20 16:13:01,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0882917bd75b7c2c1d18866f6524d180530ca282 HTTP/1.1" 200 None
2024-09-20 16:13:02,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0882917bd75b7c2c1d18866f6524d180530ca282/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-20 16:13:02,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0882917bd75b7c2c1d18866f6524d180530ca282/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-20 16:13:03,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0882917bd75b7c2c1d18866f6524d180530ca282 HTTP/1.1" 200 None
2024-09-20 16:13:03,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0882917bd75b7c2c1d18866f6524d180530ca282?per_page=1 HTTP/1.1" 200 None
2024-09-20 16:13:04,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0882917bd75b7c2c1d18866f6524d180530ca282 HTTP/1.1" 200 None
2024-09-20 16:13:04,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0882917bd75b7c2c1d18866f6524d180530ca282/status HTTP/1.1" 200 None
2024-09-20 16:13:04,618 [ scc.repo] DEBUG - PR 430 sbesson 'HdfStorage.read: fix rowNumbers for all start/end values'
2024-09-20 16:13:05,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None
2024-09-20 16:13:05,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None
2024-09-20 16:13:06,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-09-20 16:13:06,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-09-20 16:13:07,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-09-20 16:13:07,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-20 16:13:07,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-20 16:13:08,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-09-20 16:13:08,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-09-20 16:13:09,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-09-20 16:13:09,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-09-20 16:13:09,919 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-09-20 16:13:10,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-09-20 16:13:10,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-09-20 16:13:11,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-09-20 16:13:11,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-20 16:13:12,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-20 16:13:12,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-09-20 16:13:13,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-09-20 16:13:13,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-20 16:13:14,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-20 16:13:14,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-09-20 16:13:15,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-09-20 16:13:15,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-09-20 16:13:15,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-09-20 16:13:15,919 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-09-20 16:13:16,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-09-20 16:13:16,377 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-09-20 16:13:16,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-09-20 16:13:17,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-09-20 16:13:17,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-09-20 16:13:18,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-20 16:13:18,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-09-20 16:13:19,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-09-20 16:13:19,227 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-09-20 16:13:19,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-09-20 16:13:20,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-09-20 16:13:20,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-09-20 16:13:21,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-20 16:13:21,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-20 16:13:22,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-09-20 16:13:22,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-09-20 16:13:22,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-09-20 16:13:23,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-09-20 16:13:23,339 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-09-20 16:13:23,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-09-20 16:13:24,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-09-20 16:13:24,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-09-20 16:13:25,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-09-20 16:13:25,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-09-20 16:13:26,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-20 16:13:26,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-09-20 16:13:27,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-09-20 16:13:27,063 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-09-20 16:13:27,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-09-20 16:13:28,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-09-20 16:13:28,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-20 16:13:28,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-09-20 16:13:29,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-09-20 16:13:29,397 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-09-20 16:13:29,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-09-20 16:13:30,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-09-20 16:13:30,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-09-20 16:13:31,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-20 16:13:31,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-09-20 16:13:32,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-09-20 16:13:32,220 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-09-20 16:13:32,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-09-20 16:13:33,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-09-20 16:13:33,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-09-20 16:13:34,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-20 16:13:34,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-09-20 16:13:35,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-09-20 16:13:35,126 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-09-20 16:13:35,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-09-20 16:13:36,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-09-20 16:13:36,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-09-20 16:13:36,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-09-20 16:13:36,966 [ scc.repo] DEBUG ## Branches found:
2024-09-20 16:13:36,966 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-09-20 16:13:36,966 [ scc.git] DEBUG Get sha1 of %s
2024-09-20 16:13:36,966 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:13:36,972 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-20 16:13:36,976 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-20 16:13:36,977 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-20 16:13:36,982 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-20 16:13:36,987 [ scc.git] DEBUG Already up to date.
2024-09-20 16:13:36,987 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-09-20 16:13:37,750 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-20 16:13:37,750 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-09-20 16:13:37,754 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-09-20 16:13:38,053 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-20 16:13:38,053 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-09-20 16:13:38,058 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-09-20 16:13:38,403 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-20 16:13:38,404 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-09-20 16:13:38,408 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-09-20 16:13:38,693 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-20 16:13:38,693 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-09-20 16:13:38,698 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-09-20 16:13:39,044 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-20 16:13:39,044 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-09-20 16:13:39,048 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-09-20 16:13:39,334 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-20 16:13:39,335 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-09-20 16:13:39,339 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-09-20 16:13:39,628 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-20 16:13:39,628 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-09-20 16:13:39,633 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-09-20 16:13:39,963 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-20 16:13:39,963 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-09-20 16:13:39,967 [ scc.git] DEBUG Calling 'git fetch origin pull/430/head'
2024-09-20 16:13:40,408 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-20 16:13:40,409 [ scc.git] DEBUG * branch refs/pull/430/head -> FETCH_HEAD
2024-09-20 16:13:40,411 [ scc.git] DEBUG ## Unique users: []
2024-09-20 16:13:40,411 [ scc.git] DEBUG Get sha1 of %s
2024-09-20 16:13:40,411 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:13:40,416 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-09-20 16:13:40,427 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:13:40,431 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-09-20 16:13:40,485 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-09-20 16:13:40,485 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-09-20 16:13:40,486 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-20 16:13:40,490 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-09-20 16:13:40,490 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-09-20 16:13:40,490 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-09-20 16:13:40,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:13:40,621 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-09-20 16:13:40,633 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:13:40,637 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-09-20 16:13:40,765 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-09-20 16:13:40,765 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-09-20 16:13:40,765 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-20 16:13:40,773 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-09-20 16:13:40,773 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-09-20 16:13:40,773 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-09-20 16:13:41,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:13:41,032 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-09-20 16:13:41,044 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:13:41,049 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-09-20 16:13:41,114 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-09-20 16:13:41,114 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-20 16:13:41,118 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-09-20 16:13:41,118 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-09-20 16:13:41,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:13:41,409 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-09-20 16:13:41,421 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:13:41,425 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-09-20 16:13:41,498 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-09-20 16:13:41,498 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-09-20 16:13:41,499 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-20 16:13:41,503 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-09-20 16:13:41,503 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-09-20 16:13:41,503 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-09-20 16:13:41,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:13:41,787 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-09-20 16:13:41,798 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:13:41,802 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-09-20 16:13:41,825 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-20 16:13:41,827 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-09-20 16:13:41,827 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-09-20 16:13:41,827 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-09-20 16:13:41,827 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-09-20 16:13:41,827 [ scc.git] DEBUG create mode 100644 connect.py
2024-09-20 16:13:42,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:13:42,174 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-09-20 16:13:42,185 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:13:42,189 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-09-20 16:13:42,242 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-09-20 16:13:42,243 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-20 16:13:42,246 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-09-20 16:13:42,246 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-09-20 16:13:42,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:13:42,559 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-09-20 16:13:42,570 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:13:42,575 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-09-20 16:13:42,653 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-09-20 16:13:42,654 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-20 16:13:42,658 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-09-20 16:13:42,658 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-09-20 16:13:42,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:13:42,947 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-09-20 16:13:42,959 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:13:42,963 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-09-20 16:13:43,013 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-09-20 16:13:43,014 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-20 16:13:43,021 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-09-20 16:13:43,021 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-09-20 16:13:43,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:13:43,330 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0882917bd75b7c2c1d18866f6524d180530ca282'
2024-09-20 16:13:43,342 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:13:43,346 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 430 (HdfStorage.read: fix rowNumbers for all start/end values) 0882917bd75b7c2c1d18866f6524d180530ca282'
2024-09-20 16:13:43,368 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-20 16:13:43,371 [ scc.git] DEBUG src/omero/hdfstorageV2.py | 9 ++-------
2024-09-20 16:13:43,371 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 7 deletions(-)
2024-09-20 16:13:43,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:13:43,718 [ scc.git] DEBUG Calling 'git submodule update'
2024-09-20 16:13:43,761 [ scc.git] DEBUG Get sha1 of %s
2024-09-20 16:13:43,761 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:13:43,766 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-20 16:13:43,804 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-09-20 16:13:43,812 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd229d66f40> has no local changes
2024-09-20 16:13:43,812 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 427 Rdornier 'Add fileset folder creation' (user: Rdornier)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 430 sbesson 'HdfStorage.read: fix rowNumbers for all start/end values'
Generated by OMERO-python-superbuild-push#179 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/179/)'
2024-09-20 16:13:43,824 [ scc.git] DEBUG [detached HEAD e6efabe8] merge master -Dorg -Ssuccess-only
2024-09-20 16:13:43,824 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-20 16:13:43,824 [ scc.git] INFO Overriding base-branch from master to develop
2024-09-20 16:13:43,824 [ scc.repo] DEBUG ## PRs found:
2024-09-20 16:13:44,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-09-20 16:13:44,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-09-20 16:13:45,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-09-20 16:13:45,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-20 16:13:46,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-20 16:13:46,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-09-20 16:13:47,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-09-20 16:13:47,190 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-09-20 16:13:47,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-09-20 16:13:48,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-09-20 16:13:48,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-09-20 16:13:49,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-09-20 16:13:49,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-09-20 16:13:50,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-09-20 16:13:50,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-09-20 16:13:51,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-20 16:13:51,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-09-20 16:13:52,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-09-20 16:13:52,026 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-09-20 16:13:52,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-09-20 16:13:53,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-09-20 16:13:53,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-09-20 16:13:53,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-09-20 16:13:53,977 [ scc.repo] DEBUG ## Branches found:
2024-09-20 16:13:53,977 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-09-20 16:13:53,977 [ scc.git] DEBUG Get sha1 of %s
2024-09-20 16:13:53,977 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:13:53,987 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-09-20 16:13:53,994 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-20 16:13:53,994 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-09-20 16:13:54,001 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-09-20 16:13:54,007 [ scc.git] DEBUG Already up to date.
2024-09-20 16:13:54,007 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-09-20 16:13:54,475 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-09-20 16:13:54,475 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-09-20 16:13:54,482 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-09-20 16:13:54,867 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-09-20 16:13:54,867 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-09-20 16:13:54,872 [ scc.git] DEBUG ## Unique users: []
2024-09-20 16:13:54,872 [ scc.git] DEBUG Get sha1 of %s
2024-09-20 16:13:54,872 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:13:54,878 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-09-20 16:13:54,885 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:13:54,890 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-09-20 16:13:54,936 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-09-20 16:13:54,936 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-09-20 16:13:54,936 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-09-20 16:13:54,936 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-09-20 16:13:54,942 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-09-20 16:13:54,947 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-09-20 16:13:55,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:13:55,088 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-09-20 16:13:55,095 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-09-20 16:13:55,100 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#179](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/179/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/179/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-09-20 16:13:55,105 [ scc.config] DEBUG Found github.token
2024-09-20 16:13:55,105 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-09-20 16:13:55,106 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-09-20 16:13:55,110 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:13:55,115 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-09-20 16:13:55,124 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-20 16:13:55,126 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-09-20 16:13:55,126 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-09-20 16:13:55,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:13:55,483 [ scc.git] DEBUG Calling 'git submodule update'
2024-09-20 16:13:55,525 [ scc.git] DEBUG Get sha1 of %s
2024-09-20 16:13:55,525 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:13:55,530 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-20 16:13:55,568 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-09-20 16:13:55,573 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd22adbb610> has no local changes
2024-09-20 16:13:55,573 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#179 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/179/)'
2024-09-20 16:13:55,581 [ scc.git] DEBUG [detached HEAD e297db8] merge master -Dorg -Ssuccess-only
2024-09-20 16:13:55,582 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-20 16:13:55,582 [ scc.repo] DEBUG ## PRs found:
2024-09-20 16:13:56,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-09-20 16:13:56,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581 HTTP/1.1" 200 None
2024-09-20 16:13:57,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581/comments HTTP/1.1" 200 None
2024-09-20 16:13:57,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/580 HTTP/1.1" 200 None
2024-09-20 16:13:57,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-09-20 16:13:58,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-20 16:13:58,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-20 16:13:59,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-09-20 16:13:59,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc?per_page=1 HTTP/1.1" 200 None
2024-09-20 16:14:00,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-09-20 16:14:00,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/status HTTP/1.1" 200 None
2024-09-20 16:14:00,805 [ scc.repo] DEBUG - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-09-20 16:14:01,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568 HTTP/1.1" 200 None
2024-09-20 16:14:01,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568/comments HTTP/1.1" 200 None
2024-09-20 16:14:02,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-09-20 16:14:02,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-09-20 16:14:03,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-09-20 16:14:03,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-09-20 16:14:04,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-09-20 16:14:04,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-20 16:14:05,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-20 16:14:05,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-09-20 16:14:06,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-09-20 16:14:06,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-09-20 16:14:07,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-09-20 16:14:07,082 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-09-20 16:14:07,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-09-20 16:14:08,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-09-20 16:14:08,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-09-20 16:14:09,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-20 16:14:09,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-20 16:14:10,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-09-20 16:14:10,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-09-20 16:14:11,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-09-20 16:14:11,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-09-20 16:14:11,532 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-09-20 16:14:11,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-09-20 16:14:12,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-09-20 16:14:12,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-09-20 16:14:13,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-20 16:14:13,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-20 16:14:13,952 [ scc.repo] DEBUG ## Branches found:
2024-09-20 16:14:13,952 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-09-20 16:14:13,952 [ scc.git] DEBUG Get sha1 of %s
2024-09-20 16:14:13,952 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:14:13,957 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-20 16:14:13,962 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-20 16:14:13,962 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-20 16:14:13,967 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-20 16:14:13,972 [ scc.git] DEBUG Already up to date.
2024-09-20 16:14:13,972 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-09-20 16:14:14,678 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-09-20 16:14:14,678 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-09-20 16:14:14,684 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-09-20 16:14:15,022 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-09-20 16:14:15,022 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-09-20 16:14:15,027 [ scc.git] DEBUG Calling 'git fetch origin pull/580/head'
2024-09-20 16:14:15,392 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-09-20 16:14:15,393 [ scc.git] DEBUG * branch refs/pull/580/head -> FETCH_HEAD
2024-09-20 16:14:15,398 [ scc.git] DEBUG ## Unique users: []
2024-09-20 16:14:15,398 [ scc.git] DEBUG Get sha1 of %s
2024-09-20 16:14:15,398 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:14:15,403 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-09-20 16:14:15,410 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:14:15,415 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-09-20 16:14:15,481 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-09-20 16:14:15,482 [ scc.git] DEBUG Auto-merging setup.py
2024-09-20 16:14:15,483 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-20 16:14:15,487 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-09-20 16:14:15,487 [ scc.git] DEBUG setup.py | 1 +
2024-09-20 16:14:15,487 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-09-20 16:14:15,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:14:15,678 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-09-20 16:14:15,687 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:14:15,693 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-09-20 16:14:15,754 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-09-20 16:14:15,755 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-09-20 16:14:15,756 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-20 16:14:15,760 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-09-20 16:14:15,760 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-09-20 16:14:15,760 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-09-20 16:14:16,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:14:16,061 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-09-20 16:14:16,069 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:14:16,073 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 580 (omeroweb.webgateway.obj_id_bitmask: handle empty query results) 1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-09-20 16:14:16,093 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-20 16:14:16,098 [ scc.git] DEBUG omeroweb/webgateway/views.py | 6 ++++++
2024-09-20 16:14:16,098 [ scc.git] DEBUG 1 file changed, 6 insertions(+)
2024-09-20 16:14:16,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:14:16,457 [ scc.git] DEBUG Calling 'git submodule update'
2024-09-20 16:14:16,495 [ scc.git] DEBUG Get sha1 of %s
2024-09-20 16:14:16,495 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-20 16:14:16,500 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-20 16:14:16,547 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-09-20 16:14:16,557 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd228cbcb20> has no local changes
2024-09-20 16:14:16,557 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
Generated by OMERO-python-superbuild-push#179 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/179/)'
2024-09-20 16:14:16,570 [ scc.git] DEBUG [detached HEAD 68c08e544] merge master -Dorg -Ssuccess-only
2024-09-20 16:14:16,570 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-20 16:14:16,570 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-20 16:14:16,619 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-09-20 16:14:16,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:14:16,856 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-09-20 16:14:17,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:14:17,260 [ scc.config] DEBUG Found submodule.omero-py.url
2024-09-20 16:14:17,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:14:17,638 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-09-20 16:14:18,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:14:18,029 [ scc.config] DEBUG Found submodule.omero-web.url
2024-09-20 16:14:18,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-20 16:14:18,405 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-09-20 16:14:18,439 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd22b2f00a0> has local changes
2024-09-20 16:14:18,439 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 427 Rdornier 'Add fileset folder creation' (user: Rdornier)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 430 sbesson 'HdfStorage.read: fix rowNumbers for all start/end values'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
Generated by OMERO-python-superbuild-push#179 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/179/)'
2024-09-20 16:14:18,450 [ scc.git] DEBUG [detached HEAD d905367] merge master -Dorg -Ssuccess-only
2024-09-20 16:14:18,451 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-09-20 16:14:18,451 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-09-20 16:14:18,451 [ scc.merge] INFO Already up to date.
2024-09-20 16:14:18,451 [ scc.merge] INFO
2024-09-20 16:14:18,451 [ scc.merge] INFO Merged PRs:
2024-09-20 16:14:18,451 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-09-20 16:14:18,451 [ scc.merge] INFO
2024-09-20 16:14:18,451 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-09-20 16:14:18,451 [ scc.merge] INFO Already up to date.
2024-09-20 16:14:18,451 [ scc.merge] INFO
2024-09-20 16:14:18,452 [ scc.merge] INFO Merged PRs:
2024-09-20 16:14:18,452 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-09-20 16:14:18,452 [ scc.merge] INFO
2024-09-20 16:14:18,452 [ scc.merge] INFO Repository: ome/omero-marshal
2024-09-20 16:14:18,452 [ scc.merge] INFO Excluded PRs:
2024-09-20 16:14:18,452 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-09-20 16:14:18,452 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-09-20 16:14:18,452 [ scc.merge] INFO Already up to date.
2024-09-20 16:14:18,452 [ scc.merge] INFO
2024-09-20 16:14:18,452 [ scc.merge] INFO Merged PRs:
2024-09-20 16:14:18,452 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-09-20 16:14:18,452 [ scc.merge] INFO
2024-09-20 16:14:18,452 [ scc.merge] INFO Repository: ome/omero-py
2024-09-20 16:14:18,452 [ scc.merge] INFO Excluded PRs:
2024-09-20 16:14:18,452 [ scc.merge] INFO - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
2024-09-20 16:14:18,452 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation' (user: Rdornier)
2024-09-20 16:14:18,452 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-09-20 16:14:18,452 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-09-20 16:14:18,452 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-09-20 16:14:18,452 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-09-20 16:14:18,453 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-09-20 16:14:18,453 [ scc.merge] INFO Already up to date.
2024-09-20 16:14:18,453 [ scc.merge] INFO
2024-09-20 16:14:18,453 [ scc.merge] INFO Merged PRs:
2024-09-20 16:14:18,453 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-09-20 16:14:18,453 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-09-20 16:14:18,453 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-09-20 16:14:18,453 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-09-20 16:14:18,453 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-09-20 16:14:18,453 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-09-20 16:14:18,453 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-09-20 16:14:18,453 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-09-20 16:14:18,453 [ scc.merge] INFO - PR 430 sbesson 'HdfStorage.read: fix rowNumbers for all start/end values'
2024-09-20 16:14:18,454 [ scc.merge] INFO
2024-09-20 16:14:18,454 [ scc.merge] INFO Repository: ome/omero-scripts
2024-09-20 16:14:18,454 [ scc.merge] INFO Excluded PRs:
2024-09-20 16:14:18,454 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-09-20 16:14:18,454 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-09-20 16:14:18,454 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-09-20 16:14:18,454 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-09-20 16:14:18,454 [ scc.merge] INFO Already up to date.
2024-09-20 16:14:18,454 [ scc.merge] INFO
2024-09-20 16:14:18,454 [ scc.merge] INFO Merged PRs:
2024-09-20 16:14:18,455 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-09-20 16:14:18,455 [ scc.merge] INFO
2024-09-20 16:14:18,455 [ scc.merge] INFO Conflicting PRs (not included):
2024-09-20 16:14:18,455 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-09-20 16:14:18,455 [ scc.merge] INFO
2024-09-20 16:14:18,455 [ scc.merge] INFO Repository: ome/omero-web
2024-09-20 16:14:18,455 [ scc.merge] INFO Excluded PRs:
2024-09-20 16:14:18,455 [ scc.merge] INFO - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
2024-09-20 16:14:18,455 [ scc.merge] INFO - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
2024-09-20 16:14:18,455 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-09-20 16:14:18,455 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-09-20 16:14:18,455 [ scc.merge] INFO Already up to date.
2024-09-20 16:14:18,455 [ scc.merge] INFO
2024-09-20 16:14:18,455 [ scc.merge] INFO Merged PRs:
2024-09-20 16:14:18,456 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-09-20 16:14:18,456 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-09-20 16:14:18,456 [ scc.merge] INFO - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-09-20 16:14:18,456 [ scc.merge] INFO
2024-09-20 16:14:18,456 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-09-20 16:14:18,456 [ scc.git] DEBUG Calling 'git remote'
2024-09-20 16:14:18,462 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-09-20 16:14:18,462 [ scc.git] DEBUG Calling 'git remote'
2024-09-20 16:14:18,466 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-20 16:14:18,466 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-09-20 16:14:18,466 [ scc.git] DEBUG Calling 'git remote'
2024-09-20 16:14:18,470 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-20 16:14:18,471 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-09-20 16:14:18,471 [ scc.git] DEBUG Calling 'git remote'
2024-09-20 16:14:18,474 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-20 16:14:18,475 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-09-20 16:14:18,475 [ scc.git] DEBUG Calling 'git remote'
2024-09-20 16:14:18,479 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-20 16:14:18,479 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-09-20 16:14:18,479 [ scc.git] DEBUG Calling 'git remote'
2024-09-20 16:14:18,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 4fd72efa
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from da5b7d11f
nothing to commit, working tree clean
HEAD detached from e849d72
nothing to commit, working tree clean
2024-09-20 16:14:46,740 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
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