Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-09-22 00:33:31,908 [ scc.config] DEBUG Found github.token
2024-09-22 00:33:31,910 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-09-22 00:33:32,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:33:32,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:33:32,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-09-22 00:33:32,854 [ scc.gh] DEBUG 4354 remaining from 5000 (Reset at 00:09
2024-09-22 00:33:32,855 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-22 00:33:32,859 [ scc.git] DEBUG Check current status
2024-09-22 00:33:32,859 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-22 00:33:32,863 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-09-22 00:33:32,863 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-22 00:33:32,904 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-09-22 00:33:32,907 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-09-22 00:33:32,910 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-09-22 00:33:32,914 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-09-22 00:33:32,918 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-09-22 00:33:32,923 [ scc.config] DEBUG Found remote.origin.url
2024-09-22 00:33:33,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-09-22 00:33:33,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-22 00:33:34,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-22 00:33:34,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-22 00:33:35,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-22 00:33:35,028 [ scc.git] DEBUG Resetting...
2024-09-22 00:33:35,028 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-09-22 00:33:35,034 [ scc.git] DEBUG HEAD is now at e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-09-22 00:33:35,034 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-09-22 00:33:35,089 [ scc.git] DEBUG Check current status
2024-09-22 00:33:35,090 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-22 00:33:35,094 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-09-22 00:33:35,095 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-22 00:33:35,138 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-09-22 00:33:35,141 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-09-22 00:33:35,145 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-09-22 00:33:35,149 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-09-22 00:33:35,153 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-09-22 00:33:35,154 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-09-22 00:33:35,154 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-09-22 00:33:35,154 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-09-22 00:33:35,154 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-09-22 00:33:35,154 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-09-22 00:33:35,154 [ scc.repo] DEBUG ## PRs found:
2024-09-22 00:33:35,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-09-22 00:33:35,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-09-22 00:33:35,992 [ scc.repo] DEBUG # ... Include label: dependencies
2024-09-22 00:33:35,992 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-09-22 00:33:35,992 [ scc.repo] DEBUG ## Branches found:
2024-09-22 00:33:35,992 [ scc.git] DEBUG Get sha1 of %s
2024-09-22 00:33:35,992 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:33:35,997 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-22 00:33:36,001 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-22 00:33:36,001 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-22 00:33:36,006 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-22 00:33:36,011 [ scc.git] DEBUG Already up to date.
2024-09-22 00:33:36,011 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-09-22 00:33:36,335 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-09-22 00:33:36,335 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-09-22 00:33:36,341 [ scc.git] DEBUG ## Unique users: []
2024-09-22 00:33:36,341 [ scc.git] DEBUG Get sha1 of %s
2024-09-22 00:33:36,341 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:33:36,345 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-09-22 00:33:36,349 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:33:36,352 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-09-22 00:33:36,361 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-22 00:33:36,363 [ scc.git] DEBUG omero-py | 2 +-
2024-09-22 00:33:36,363 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-09-22 00:33:36,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:33:36,500 [ scc.git] DEBUG Calling 'git submodule update'
2024-09-22 00:33:36,555 [ scc.git] DEBUG Submodule path 'omero-py': checked out '4fd72efaa8cdbec9da98e1d28678af16878a86ba'
2024-09-22 00:33:36,556 [ scc.git] DEBUG Get sha1 of %s
2024-09-22 00:33:36,556 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:33:36,561 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-09-22 00:33:37,007 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f468ebeab80> has no local changes
2024-09-22 00:33:37,008 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Generated by OMERO-python-superbuild-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/180/)'
2024-09-22 00:33:37,035 [ scc.git] DEBUG [detached HEAD 9106db8] merge master -Dorg -Snone
2024-09-22 00:33:37,035 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-09-22 00:33:37,035 [ scc.merge] INFO Already up to date.
2024-09-22 00:33:37,035 [ scc.merge] INFO
2024-09-22 00:33:37,036 [ scc.merge] INFO Merged PRs:
2024-09-22 00:33:37,036 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-09-22 00:33:37,036 [ scc.merge] INFO
2024-09-22 00:33:37,036 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-09-22 00:33:37,036 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-09-22 00:33:39,204 [ scc.config] DEBUG Found github.token
2024-09-22 00:33:39,207 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-09-22 00:33:39,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:33:39,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:33:40,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-09-22 00:33:40,182 [ scc.gh] DEBUG 4344 remaining from 5000 (Reset at 00:09
2024-09-22 00:33:40,183 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-22 00:33:40,187 [ scc.git] DEBUG Check current status
2024-09-22 00:33:40,187 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-22 00:33:40,191 [ scc.git] DEBUG 9106db8 merge master -Dorg -Snone
2024-09-22 00:33:40,191 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-22 00:33:40,229 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-09-22 00:33:40,232 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-09-22 00:33:40,236 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-09-22 00:33:40,239 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-09-22 00:33:40,242 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-09-22 00:33:40,247 [ scc.config] DEBUG Found remote.origin.url
2024-09-22 00:33:40,248 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-09-22 00:33:40,250 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-09-22 00:33:40,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-09-22 00:33:41,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-22 00:33:41,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-22 00:33:41,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-22 00:33:42,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-22 00:33:42,292 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-22 00:33:42,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-09-22 00:33:42,341 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-22 00:33:42,346 [ scc.git] DEBUG Check current status
2024-09-22 00:33:42,346 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-22 00:33:42,350 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-09-22 00:33:42,350 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-22 00:33:42,390 [ scc.config] DEBUG Found remote.origin.url
2024-09-22 00:33:42,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-09-22 00:33:43,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-22 00:33:43,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-22 00:33:44,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-22 00:33:44,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-22 00:33:44,417 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-22 00:33:44,458 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-22 00:33:44,459 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-09-22 00:33:44,459 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-22 00:33:44,463 [ scc.git] DEBUG Check current status
2024-09-22 00:33:44,463 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-22 00:33:44,467 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-09-22 00:33:44,468 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-22 00:33:44,510 [ scc.config] DEBUG Found remote.origin.url
2024-09-22 00:33:44,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-09-22 00:33:45,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-22 00:33:45,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-22 00:33:46,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-22 00:33:46,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-22 00:33:46,522 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-22 00:33:46,564 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-22 00:33:46,566 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-09-22 00:33:46,566 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-22 00:33:46,570 [ scc.git] DEBUG Check current status
2024-09-22 00:33:46,571 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-22 00:33:46,575 [ scc.git] DEBUG 4fd72efa Bump version: 5.19.5 → 5.19.6.dev0
2024-09-22 00:33:46,576 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-22 00:33:46,616 [ scc.config] DEBUG Found remote.origin.url
2024-09-22 00:33:46,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-09-22 00:33:47,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-22 00:33:48,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-22 00:33:48,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-22 00:33:48,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-22 00:33:48,838 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-22 00:33:48,875 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-22 00:33:48,876 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-09-22 00:33:48,876 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-22 00:33:48,881 [ scc.git] DEBUG Check current status
2024-09-22 00:33:48,881 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-22 00:33:48,885 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-09-22 00:33:48,886 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-22 00:33:48,926 [ scc.config] DEBUG Found remote.origin.url
2024-09-22 00:33:48,927 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-09-22 00:33:49,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-09-22 00:33:49,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-22 00:33:50,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-22 00:33:50,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-22 00:33:51,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-22 00:33:51,029 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-22 00:33:51,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-22 00:33:51,071 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-09-22 00:33:51,071 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-22 00:33:51,076 [ scc.git] DEBUG Check current status
2024-09-22 00:33:51,076 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-22 00:33:51,091 [ scc.git] DEBUG da5b7d11f Bump version: 5.27.2 → 5.27.3.dev0
2024-09-22 00:33:51,091 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-22 00:33:51,133 [ scc.config] DEBUG Found remote.origin.url
2024-09-22 00:33:51,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-09-22 00:33:51,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-22 00:33:52,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-22 00:33:52,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-22 00:33:53,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-22 00:33:53,155 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-22 00:33:53,194 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-22 00:33:53,194 [ scc.git] DEBUG Resetting...
2024-09-22 00:33:53,194 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-09-22 00:33:53,201 [ scc.git] DEBUG HEAD is now at 9106db8 merge master -Dorg -Snone
2024-09-22 00:33:53,201 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-09-22 00:33:53,256 [ scc.git] DEBUG Check current status
2024-09-22 00:33:53,256 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-22 00:33:53,261 [ scc.git] DEBUG 9106db8 merge master -Dorg -Snone
2024-09-22 00:33:53,261 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-22 00:33:53,301 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-09-22 00:33:53,304 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-09-22 00:33:53,307 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-09-22 00:33:53,311 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-09-22 00:33:53,315 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-09-22 00:33:53,316 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-09-22 00:33:53,316 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-09-22 00:33:53,316 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-09-22 00:33:53,316 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-09-22 00:33:53,316 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-09-22 00:33:53,316 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-09-22 00:33:53,316 [ scc.repo] DEBUG ## PRs found:
2024-09-22 00:33:53,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-09-22 00:33:54,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-09-22 00:33:54,086 [ scc.repo] DEBUG # ... Include label: dependencies
2024-09-22 00:33:54,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-09-22 00:33:55,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-22 00:33:55,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-09-22 00:33:55,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/9660559833988d271074de56e54f2462a7be74e9?per_page=1 HTTP/1.1" 200 2
2024-09-22 00:33:55,994 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-09-22 00:33:55,994 [ scc.repo] DEBUG ## Branches found:
2024-09-22 00:33:55,994 [ scc.git] DEBUG Get sha1 of %s
2024-09-22 00:33:55,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:33:55,999 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-22 00:33:56,004 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-22 00:33:56,004 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-22 00:33:56,009 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-22 00:33:56,014 [ scc.git] DEBUG Already up to date.
2024-09-22 00:33:56,015 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-09-22 00:33:56,326 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-09-22 00:33:56,326 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-09-22 00:33:56,333 [ scc.git] DEBUG ## Unique users: []
2024-09-22 00:33:56,333 [ scc.git] DEBUG Get sha1 of %s
2024-09-22 00:33:56,333 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:33:56,338 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-09-22 00:33:56,343 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:33:56,348 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-09-22 00:33:56,353 [ scc.git] DEBUG Already up to date.
2024-09-22 00:33:56,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:33:56,488 [ scc.git] DEBUG Calling 'git submodule update'
2024-09-22 00:33:56,527 [ scc.git] DEBUG Get sha1 of %s
2024-09-22 00:33:56,527 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:33:56,532 [ scc.repo] DEBUG ## PRs found:
2024-09-22 00:33:57,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-09-22 00:33:57,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-09-22 00:33:57,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-09-22 00:33:58,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-09-22 00:33:58,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-22 00:33:59,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-09-22 00:33:59,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-09-22 00:33:59,917 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-09-22 00:33:59,917 [ scc.repo] DEBUG ## Branches found:
2024-09-22 00:33:59,917 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-09-22 00:33:59,917 [ scc.git] DEBUG Get sha1 of %s
2024-09-22 00:33:59,917 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:33:59,924 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-22 00:33:59,929 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-22 00:33:59,929 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-22 00:33:59,935 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-22 00:33:59,940 [ scc.git] DEBUG Already up to date.
2024-09-22 00:33:59,941 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-09-22 00:34:00,318 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-09-22 00:34:00,318 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-09-22 00:34:00,324 [ scc.git] DEBUG ## Unique users: []
2024-09-22 00:34:00,324 [ scc.git] DEBUG Get sha1 of %s
2024-09-22 00:34:00,324 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:34:00,334 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-09-22 00:34:00,345 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:34:00,354 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-09-22 00:34:00,438 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-09-22 00:34:00,438 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-09-22 00:34:00,438 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-09-22 00:34:00,438 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-09-22 00:34:00,438 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-09-22 00:34:00,439 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-09-22 00:34:00,439 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-09-22 00:34:00,439 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-09-22 00:34:00,439 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-09-22 00:34:00,439 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-22 00:34:00,445 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-09-22 00:34:00,445 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-09-22 00:34:00,445 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-09-22 00:34:00,445 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-09-22 00:34:00,445 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-09-22 00:34:00,448 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-09-22 00:34:00,449 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-09-22 00:34:00,449 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-09-22 00:34:00,449 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-09-22 00:34:00,449 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-09-22 00:34:00,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:34:00,600 [ scc.git] DEBUG Calling 'git submodule update'
2024-09-22 00:34:00,652 [ scc.git] DEBUG Get sha1 of %s
2024-09-22 00:34:00,652 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:34:00,659 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-22 00:34:00,708 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-09-22 00:34:00,716 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd254e23f70> has no local changes
2024-09-22 00:34:00,716 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/180/)'
2024-09-22 00:34:00,727 [ scc.git] DEBUG [detached HEAD fd51123] merge master -Dorg -Ssuccess-only
2024-09-22 00:34:00,727 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-22 00:34:00,728 [ scc.repo] DEBUG ## PRs found:
2024-09-22 00:34:01,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-09-22 00:34:01,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-09-22 00:34:02,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-09-22 00:34:02,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-09-22 00:34:02,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-22 00:34:03,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-09-22 00:34:03,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-09-22 00:34:03,900 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-09-22 00:34:04,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-09-22 00:34:04,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-09-22 00:34:05,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-09-22 00:34:05,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-09-22 00:34:05,793 [ scc.repo] DEBUG ## Branches found:
2024-09-22 00:34:05,793 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-09-22 00:34:05,793 [ scc.git] DEBUG Get sha1 of %s
2024-09-22 00:34:05,793 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:34:05,798 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-22 00:34:05,802 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-22 00:34:05,803 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-22 00:34:05,807 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-22 00:34:05,812 [ scc.git] DEBUG Already up to date.
2024-09-22 00:34:05,812 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-09-22 00:34:06,157 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-09-22 00:34:06,158 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-09-22 00:34:06,162 [ scc.git] DEBUG ## Unique users: []
2024-09-22 00:34:06,162 [ scc.git] DEBUG Get sha1 of %s
2024-09-22 00:34:06,163 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:34:06,168 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-09-22 00:34:06,174 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:34:06,180 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-09-22 00:34:06,210 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-09-22 00:34:06,211 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-22 00:34:06,216 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-09-22 00:34:06,217 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-09-22 00:34:06,217 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-09-22 00:34:06,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:34:06,353 [ scc.git] DEBUG Calling 'git submodule update'
2024-09-22 00:34:06,393 [ scc.git] DEBUG Get sha1 of %s
2024-09-22 00:34:06,393 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:34:06,398 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-22 00:34:06,441 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-09-22 00:34:06,448 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd257126ee0> has no local changes
2024-09-22 00:34:06,448 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/180/)'
2024-09-22 00:34:06,457 [ scc.git] DEBUG [detached HEAD 2cb053a] merge master -Dorg -Ssuccess-only
2024-09-22 00:34:06,457 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-22 00:34:06,458 [ scc.repo] DEBUG ## PRs found:
2024-09-22 00:34:07,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-09-22 00:34:07,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/430 HTTP/1.1" 200 None
2024-09-22 00:34:07,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/430/comments HTTP/1.1" 200 None
2024-09-22 00:34:08,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0882917bd75b7c2c1d18866f6524d180530ca282 HTTP/1.1" 200 None
2024-09-22 00:34:08,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0882917bd75b7c2c1d18866f6524d180530ca282/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-22 00:34:09,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0882917bd75b7c2c1d18866f6524d180530ca282/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-22 00:34:09,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0882917bd75b7c2c1d18866f6524d180530ca282 HTTP/1.1" 200 None
2024-09-22 00:34:10,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0882917bd75b7c2c1d18866f6524d180530ca282?per_page=1 HTTP/1.1" 200 None
2024-09-22 00:34:10,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0882917bd75b7c2c1d18866f6524d180530ca282 HTTP/1.1" 200 None
2024-09-22 00:34:11,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0882917bd75b7c2c1d18866f6524d180530ca282/status HTTP/1.1" 200 None
2024-09-22 00:34:11,343 [ scc.repo] DEBUG - PR 430 sbesson 'HdfStorage.read: fix rowNumbers for all start/end values'
2024-09-22 00:34:11,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None
2024-09-22 00:34:12,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None
2024-09-22 00:34:12,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-09-22 00:34:13,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-09-22 00:34:13,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-09-22 00:34:14,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-22 00:34:14,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-22 00:34:15,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-09-22 00:34:15,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-09-22 00:34:16,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-09-22 00:34:16,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-09-22 00:34:16,427 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-09-22 00:34:16,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-09-22 00:34:17,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-09-22 00:34:17,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-09-22 00:34:18,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-22 00:34:18,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-22 00:34:19,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-09-22 00:34:19,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-09-22 00:34:20,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-22 00:34:20,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-22 00:34:21,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-09-22 00:34:21,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-09-22 00:34:21,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-09-22 00:34:22,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-09-22 00:34:22,291 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-09-22 00:34:22,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-09-22 00:34:22,799 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-09-22 00:34:23,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-09-22 00:34:23,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-09-22 00:34:24,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-09-22 00:34:24,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-22 00:34:25,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-09-22 00:34:25,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-09-22 00:34:25,578 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-09-22 00:34:26,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-09-22 00:34:26,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-09-22 00:34:27,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-09-22 00:34:27,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-22 00:34:28,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-22 00:34:28,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-09-22 00:34:28,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-09-22 00:34:29,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-09-22 00:34:29,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-09-22 00:34:29,745 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-09-22 00:34:30,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-09-22 00:34:30,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-09-22 00:34:31,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-09-22 00:34:31,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-09-22 00:34:32,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-09-22 00:34:32,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-22 00:34:33,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-09-22 00:34:33,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-09-22 00:34:33,421 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-09-22 00:34:33,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-09-22 00:34:34,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-09-22 00:34:34,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-22 00:34:35,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-09-22 00:34:35,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-09-22 00:34:35,719 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-09-22 00:34:36,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-09-22 00:34:36,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-09-22 00:34:37,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-09-22 00:34:37,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-22 00:34:38,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-09-22 00:34:38,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-09-22 00:34:38,494 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-09-22 00:34:38,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-09-22 00:34:39,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-09-22 00:34:39,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-09-22 00:34:40,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-22 00:34:40,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-09-22 00:34:41,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-09-22 00:34:41,201 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-09-22 00:34:41,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-09-22 00:34:42,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-09-22 00:34:42,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-09-22 00:34:43,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-09-22 00:34:43,030 [ scc.repo] DEBUG ## Branches found:
2024-09-22 00:34:43,030 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-09-22 00:34:43,031 [ scc.git] DEBUG Get sha1 of %s
2024-09-22 00:34:43,031 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:34:43,037 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-22 00:34:43,042 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-22 00:34:43,042 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-22 00:34:43,048 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-22 00:34:43,053 [ scc.git] DEBUG Already up to date.
2024-09-22 00:34:43,053 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-09-22 00:34:43,823 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-22 00:34:43,823 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-09-22 00:34:43,829 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-09-22 00:34:44,158 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-22 00:34:44,158 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-09-22 00:34:44,163 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-09-22 00:34:44,542 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-22 00:34:44,543 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-09-22 00:34:44,548 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-09-22 00:34:44,867 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-22 00:34:44,868 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-09-22 00:34:44,873 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-09-22 00:34:45,206 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-22 00:34:45,206 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-09-22 00:34:45,211 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-09-22 00:34:45,511 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-22 00:34:45,511 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-09-22 00:34:45,516 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-09-22 00:34:45,810 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-22 00:34:45,810 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-09-22 00:34:45,816 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-09-22 00:34:46,101 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-22 00:34:46,101 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-09-22 00:34:46,106 [ scc.git] DEBUG Calling 'git fetch origin pull/430/head'
2024-09-22 00:34:46,433 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-22 00:34:46,433 [ scc.git] DEBUG * branch refs/pull/430/head -> FETCH_HEAD
2024-09-22 00:34:46,440 [ scc.git] DEBUG ## Unique users: []
2024-09-22 00:34:46,441 [ scc.git] DEBUG Get sha1 of %s
2024-09-22 00:34:46,441 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:34:46,448 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-09-22 00:34:46,461 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:34:46,466 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-09-22 00:34:46,513 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-09-22 00:34:46,514 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-09-22 00:34:46,515 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-22 00:34:46,519 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-09-22 00:34:46,519 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-09-22 00:34:46,519 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-09-22 00:34:46,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:34:46,653 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-09-22 00:34:46,667 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:34:46,672 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-09-22 00:34:46,723 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-09-22 00:34:46,723 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-09-22 00:34:46,723 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-22 00:34:46,732 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-09-22 00:34:46,732 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-09-22 00:34:46,732 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-09-22 00:34:47,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:34:47,043 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-09-22 00:34:47,055 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:34:47,060 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-09-22 00:34:47,081 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-09-22 00:34:47,082 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-22 00:34:47,086 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-09-22 00:34:47,086 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-09-22 00:34:47,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:34:47,447 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-09-22 00:34:47,461 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:34:47,469 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-09-22 00:34:47,554 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-09-22 00:34:47,554 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-09-22 00:34:47,555 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-22 00:34:47,559 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-09-22 00:34:47,559 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-09-22 00:34:47,559 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-09-22 00:34:47,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:34:47,832 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-09-22 00:34:47,844 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:34:47,850 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-09-22 00:34:47,882 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-22 00:34:47,885 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-09-22 00:34:47,885 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-09-22 00:34:47,885 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-09-22 00:34:47,886 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-09-22 00:34:47,886 [ scc.git] DEBUG create mode 100644 connect.py
2024-09-22 00:34:48,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:34:48,223 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-09-22 00:34:48,237 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:34:48,242 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-09-22 00:34:48,333 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-09-22 00:34:48,335 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-22 00:34:48,339 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-09-22 00:34:48,339 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-09-22 00:34:48,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:34:48,624 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-09-22 00:34:48,637 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:34:48,642 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-09-22 00:34:48,666 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-09-22 00:34:48,667 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-22 00:34:48,671 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-09-22 00:34:48,671 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-09-22 00:34:49,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:34:49,020 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-09-22 00:34:49,033 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:34:49,038 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-09-22 00:34:49,086 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-09-22 00:34:49,087 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-22 00:34:49,094 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-09-22 00:34:49,095 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-09-22 00:34:49,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:34:49,408 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0882917bd75b7c2c1d18866f6524d180530ca282'
2024-09-22 00:34:49,421 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:34:49,426 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 430 (HdfStorage.read: fix rowNumbers for all start/end values) 0882917bd75b7c2c1d18866f6524d180530ca282'
2024-09-22 00:34:49,460 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-22 00:34:49,463 [ scc.git] DEBUG src/omero/hdfstorageV2.py | 9 ++-------
2024-09-22 00:34:49,463 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 7 deletions(-)
2024-09-22 00:34:49,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:34:49,792 [ scc.git] DEBUG Calling 'git submodule update'
2024-09-22 00:34:49,832 [ scc.git] DEBUG Get sha1 of %s
2024-09-22 00:34:49,832 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:34:49,838 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-22 00:34:49,880 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-09-22 00:34:49,890 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd2545cdf40> has no local changes
2024-09-22 00:34:49,890 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 427 Rdornier 'Add fileset folder creation' (user: Rdornier)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 430 sbesson 'HdfStorage.read: fix rowNumbers for all start/end values'
Generated by OMERO-python-superbuild-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/180/)'
2024-09-22 00:34:49,903 [ scc.git] DEBUG [detached HEAD bbef1c7b] merge master -Dorg -Ssuccess-only
2024-09-22 00:34:49,904 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-22 00:34:49,904 [ scc.git] INFO Overriding base-branch from master to develop
2024-09-22 00:34:49,904 [ scc.repo] DEBUG ## PRs found:
2024-09-22 00:34:50,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-09-22 00:34:50,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-09-22 00:34:51,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-09-22 00:34:51,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-22 00:34:52,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-22 00:34:52,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-09-22 00:34:53,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-09-22 00:34:53,160 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-09-22 00:34:53,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-09-22 00:34:54,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-09-22 00:34:54,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-09-22 00:34:55,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-09-22 00:34:55,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-09-22 00:34:56,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-09-22 00:34:56,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-09-22 00:34:56,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-22 00:34:57,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-09-22 00:34:57,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-09-22 00:34:57,823 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-09-22 00:34:58,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-09-22 00:34:58,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-09-22 00:34:59,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-09-22 00:34:59,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-09-22 00:34:59,736 [ scc.repo] DEBUG ## Branches found:
2024-09-22 00:34:59,736 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-09-22 00:34:59,736 [ scc.git] DEBUG Get sha1 of %s
2024-09-22 00:34:59,736 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:34:59,741 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-09-22 00:34:59,747 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-22 00:34:59,747 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-09-22 00:34:59,753 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-09-22 00:34:59,760 [ scc.git] DEBUG Already up to date.
2024-09-22 00:34:59,760 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-09-22 00:35:00,106 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-09-22 00:35:00,106 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-09-22 00:35:00,111 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-09-22 00:35:00,406 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-09-22 00:35:00,406 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-09-22 00:35:00,411 [ scc.git] DEBUG ## Unique users: []
2024-09-22 00:35:00,411 [ scc.git] DEBUG Get sha1 of %s
2024-09-22 00:35:00,411 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:35:00,416 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-09-22 00:35:00,424 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:35:00,428 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-09-22 00:35:00,482 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-09-22 00:35:00,482 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-09-22 00:35:00,482 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-09-22 00:35:00,483 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-09-22 00:35:00,489 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-09-22 00:35:00,496 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-09-22 00:35:00,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:35:00,633 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-09-22 00:35:00,640 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-09-22 00:35:00,645 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#180](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/180/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/180/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-09-22 00:35:00,650 [ scc.config] DEBUG Found github.token
2024-09-22 00:35:00,650 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-09-22 00:35:00,650 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-09-22 00:35:00,655 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:35:00,659 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-09-22 00:35:00,668 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-22 00:35:00,671 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-09-22 00:35:00,671 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-09-22 00:35:01,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:35:01,030 [ scc.git] DEBUG Calling 'git submodule update'
2024-09-22 00:35:01,075 [ scc.git] DEBUG Get sha1 of %s
2024-09-22 00:35:01,075 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:35:01,080 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-22 00:35:01,117 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-09-22 00:35:01,123 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd254e23220> has no local changes
2024-09-22 00:35:01,123 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/180/)'
2024-09-22 00:35:01,131 [ scc.git] DEBUG [detached HEAD 6dc626a] merge master -Dorg -Ssuccess-only
2024-09-22 00:35:01,132 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-22 00:35:01,132 [ scc.repo] DEBUG ## PRs found:
2024-09-22 00:35:01,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-09-22 00:35:02,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581 HTTP/1.1" 200 None
2024-09-22 00:35:02,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581/comments HTTP/1.1" 200 None
2024-09-22 00:35:02,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/580 HTTP/1.1" 200 None
2024-09-22 00:35:03,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-09-22 00:35:03,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-22 00:35:04,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-22 00:35:04,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-09-22 00:35:05,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc?per_page=1 HTTP/1.1" 200 None
2024-09-22 00:35:05,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-09-22 00:35:06,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/status HTTP/1.1" 200 None
2024-09-22 00:35:06,152 [ scc.repo] DEBUG - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-09-22 00:35:06,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568 HTTP/1.1" 200 None
2024-09-22 00:35:07,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568/comments HTTP/1.1" 200 None
2024-09-22 00:35:07,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-09-22 00:35:07,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-09-22 00:35:08,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-09-22 00:35:08,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-09-22 00:35:09,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-09-22 00:35:09,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-22 00:35:10,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-22 00:35:10,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-09-22 00:35:11,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-09-22 00:35:11,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-09-22 00:35:12,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-09-22 00:35:12,162 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-09-22 00:35:12,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-09-22 00:35:13,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-09-22 00:35:13,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-09-22 00:35:14,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-22 00:35:14,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-22 00:35:14,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-09-22 00:35:15,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-09-22 00:35:15,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-09-22 00:35:16,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-09-22 00:35:16,332 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-09-22 00:35:16,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-09-22 00:35:17,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-09-22 00:35:17,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-09-22 00:35:18,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-22 00:35:18,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-22 00:35:18,780 [ scc.repo] DEBUG ## Branches found:
2024-09-22 00:35:18,780 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-09-22 00:35:18,780 [ scc.git] DEBUG Get sha1 of %s
2024-09-22 00:35:18,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:35:18,785 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-22 00:35:18,789 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-22 00:35:18,790 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-22 00:35:18,795 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-22 00:35:18,800 [ scc.git] DEBUG Already up to date.
2024-09-22 00:35:18,800 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-09-22 00:35:19,259 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-09-22 00:35:19,259 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-09-22 00:35:19,264 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-09-22 00:35:19,600 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-09-22 00:35:19,600 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-09-22 00:35:19,605 [ scc.git] DEBUG Calling 'git fetch origin pull/580/head'
2024-09-22 00:35:19,929 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-09-22 00:35:19,930 [ scc.git] DEBUG * branch refs/pull/580/head -> FETCH_HEAD
2024-09-22 00:35:19,934 [ scc.git] DEBUG ## Unique users: []
2024-09-22 00:35:19,935 [ scc.git] DEBUG Get sha1 of %s
2024-09-22 00:35:19,935 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:35:19,940 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-09-22 00:35:19,947 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:35:19,952 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-09-22 00:35:19,989 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-09-22 00:35:19,989 [ scc.git] DEBUG Auto-merging setup.py
2024-09-22 00:35:19,991 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-22 00:35:19,995 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-09-22 00:35:19,995 [ scc.git] DEBUG setup.py | 1 +
2024-09-22 00:35:19,995 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-09-22 00:35:20,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:35:20,134 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-09-22 00:35:20,144 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:35:20,149 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-09-22 00:35:20,280 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-09-22 00:35:20,280 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-09-22 00:35:20,281 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-22 00:35:20,285 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-09-22 00:35:20,285 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-09-22 00:35:20,285 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-09-22 00:35:20,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:35:20,512 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-09-22 00:35:20,520 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:35:20,524 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 580 (omeroweb.webgateway.obj_id_bitmask: handle empty query results) 1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-09-22 00:35:20,560 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-22 00:35:20,564 [ scc.git] DEBUG omeroweb/webgateway/views.py | 6 ++++++
2024-09-22 00:35:20,564 [ scc.git] DEBUG 1 file changed, 6 insertions(+)
2024-09-22 00:35:20,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:35:20,899 [ scc.git] DEBUG Calling 'git submodule update'
2024-09-22 00:35:20,938 [ scc.git] DEBUG Get sha1 of %s
2024-09-22 00:35:20,938 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-22 00:35:20,942 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-22 00:35:20,980 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-09-22 00:35:20,991 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd254526b20> has no local changes
2024-09-22 00:35:20,991 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
Generated by OMERO-python-superbuild-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/180/)'
2024-09-22 00:35:21,004 [ scc.git] DEBUG [detached HEAD 4fffd3f80] merge master -Dorg -Ssuccess-only
2024-09-22 00:35:21,004 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-22 00:35:21,004 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-22 00:35:21,057 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-09-22 00:35:21,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:35:21,315 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-09-22 00:35:21,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:35:21,722 [ scc.config] DEBUG Found submodule.omero-py.url
2024-09-22 00:35:22,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:35:22,114 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-09-22 00:35:22,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:35:22,500 [ scc.config] DEBUG Found submodule.omero-web.url
2024-09-22 00:35:22,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-22 00:35:22,881 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-09-22 00:35:22,912 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd2550cbb80> has local changes
2024-09-22 00:35:22,912 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 427 Rdornier 'Add fileset folder creation' (user: Rdornier)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 430 sbesson 'HdfStorage.read: fix rowNumbers for all start/end values'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
Generated by OMERO-python-superbuild-push#180 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/180/)'
2024-09-22 00:35:22,923 [ scc.git] DEBUG [detached HEAD 7ff41c8] merge master -Dorg -Ssuccess-only
2024-09-22 00:35:22,923 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-09-22 00:35:22,923 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-09-22 00:35:22,923 [ scc.merge] INFO Already up to date.
2024-09-22 00:35:22,923 [ scc.merge] INFO
2024-09-22 00:35:22,924 [ scc.merge] INFO Merged PRs:
2024-09-22 00:35:22,924 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-09-22 00:35:22,924 [ scc.merge] INFO
2024-09-22 00:35:22,924 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-09-22 00:35:22,924 [ scc.merge] INFO Already up to date.
2024-09-22 00:35:22,924 [ scc.merge] INFO
2024-09-22 00:35:22,924 [ scc.merge] INFO Merged PRs:
2024-09-22 00:35:22,924 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-09-22 00:35:22,924 [ scc.merge] INFO
2024-09-22 00:35:22,924 [ scc.merge] INFO Repository: ome/omero-marshal
2024-09-22 00:35:22,924 [ scc.merge] INFO Excluded PRs:
2024-09-22 00:35:22,924 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-09-22 00:35:22,924 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-09-22 00:35:22,924 [ scc.merge] INFO Already up to date.
2024-09-22 00:35:22,924 [ scc.merge] INFO
2024-09-22 00:35:22,924 [ scc.merge] INFO Merged PRs:
2024-09-22 00:35:22,924 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-09-22 00:35:22,924 [ scc.merge] INFO
2024-09-22 00:35:22,924 [ scc.merge] INFO Repository: ome/omero-py
2024-09-22 00:35:22,924 [ scc.merge] INFO Excluded PRs:
2024-09-22 00:35:22,925 [ scc.merge] INFO - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
2024-09-22 00:35:22,925 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation' (user: Rdornier)
2024-09-22 00:35:22,925 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-09-22 00:35:22,925 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-09-22 00:35:22,925 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-09-22 00:35:22,925 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-09-22 00:35:22,925 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-09-22 00:35:22,925 [ scc.merge] INFO Already up to date.
2024-09-22 00:35:22,925 [ scc.merge] INFO
2024-09-22 00:35:22,925 [ scc.merge] INFO Merged PRs:
2024-09-22 00:35:22,925 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-09-22 00:35:22,925 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-09-22 00:35:22,925 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-09-22 00:35:22,925 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-09-22 00:35:22,925 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-09-22 00:35:22,925 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-09-22 00:35:22,925 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-09-22 00:35:22,925 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-09-22 00:35:22,925 [ scc.merge] INFO - PR 430 sbesson 'HdfStorage.read: fix rowNumbers for all start/end values'
2024-09-22 00:35:22,925 [ scc.merge] INFO
2024-09-22 00:35:22,925 [ scc.merge] INFO Repository: ome/omero-scripts
2024-09-22 00:35:22,925 [ scc.merge] INFO Excluded PRs:
2024-09-22 00:35:22,926 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-09-22 00:35:22,926 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-09-22 00:35:22,926 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-09-22 00:35:22,926 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-09-22 00:35:22,926 [ scc.merge] INFO Already up to date.
2024-09-22 00:35:22,926 [ scc.merge] INFO
2024-09-22 00:35:22,926 [ scc.merge] INFO Merged PRs:
2024-09-22 00:35:22,926 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-09-22 00:35:22,926 [ scc.merge] INFO
2024-09-22 00:35:22,926 [ scc.merge] INFO Conflicting PRs (not included):
2024-09-22 00:35:22,926 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-09-22 00:35:22,926 [ scc.merge] INFO
2024-09-22 00:35:22,926 [ scc.merge] INFO Repository: ome/omero-web
2024-09-22 00:35:22,926 [ scc.merge] INFO Excluded PRs:
2024-09-22 00:35:22,926 [ scc.merge] INFO - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
2024-09-22 00:35:22,926 [ scc.merge] INFO - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
2024-09-22 00:35:22,926 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-09-22 00:35:22,926 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-09-22 00:35:22,926 [ scc.merge] INFO Already up to date.
2024-09-22 00:35:22,926 [ scc.merge] INFO
2024-09-22 00:35:22,926 [ scc.merge] INFO Merged PRs:
2024-09-22 00:35:22,927 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-09-22 00:35:22,927 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-09-22 00:35:22,927 [ scc.merge] INFO - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-09-22 00:35:22,927 [ scc.merge] INFO
2024-09-22 00:35:22,927 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-09-22 00:35:22,927 [ scc.git] DEBUG Calling 'git remote'
2024-09-22 00:35:22,932 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-09-22 00:35:22,933 [ scc.git] DEBUG Calling 'git remote'
2024-09-22 00:35:22,949 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-22 00:35:22,949 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-09-22 00:35:22,949 [ scc.git] DEBUG Calling 'git remote'
2024-09-22 00:35:22,955 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-22 00:35:22,955 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-09-22 00:35:22,955 [ scc.git] DEBUG Calling 'git remote'
2024-09-22 00:35:22,961 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-22 00:35:22,961 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-09-22 00:35:22,961 [ scc.git] DEBUG Calling 'git remote'
2024-09-22 00:35:22,966 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-22 00:35:22,966 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-09-22 00:35:22,966 [ scc.git] DEBUG Calling 'git remote'
2024-09-22 00:35:22,971 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 4fd72efa
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from da5b7d11f
nothing to commit, working tree clean
HEAD detached from e849d72
nothing to commit, working tree clean
2024-09-22 00:35:50,590 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
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