Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-09-27 04:34:18,931 [ scc.config] DEBUG Found github.token
2024-09-27 04:34:18,934 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-09-27 04:34:19,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:34:19,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:34:19,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-09-27 04:34:19,906 [ scc.gh] DEBUG 4619 remaining from 5000 (Reset at 05:09
2024-09-27 04:34:19,907 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-27 04:34:19,911 [ scc.git] DEBUG Check current status
2024-09-27 04:34:19,911 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-27 04:34:19,914 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-09-27 04:34:19,914 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-27 04:34:19,951 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-09-27 04:34:19,953 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-09-27 04:34:19,956 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-09-27 04:34:19,960 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-09-27 04:34:19,963 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-09-27 04:34:19,968 [ scc.config] DEBUG Found remote.origin.url
2024-09-27 04:34:20,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-09-27 04:34:20,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-27 04:34:21,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-27 04:34:21,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-27 04:34:22,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-27 04:34:22,046 [ scc.git] DEBUG Resetting...
2024-09-27 04:34:22,046 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-09-27 04:34:22,052 [ scc.git] DEBUG HEAD is now at e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-09-27 04:34:22,053 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-09-27 04:34:22,102 [ scc.git] DEBUG Check current status
2024-09-27 04:34:22,102 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-27 04:34:22,106 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-09-27 04:34:22,106 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-27 04:34:22,151 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-09-27 04:34:22,156 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-09-27 04:34:22,161 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-09-27 04:34:22,167 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-09-27 04:34:22,171 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-09-27 04:34:22,172 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-09-27 04:34:22,172 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-09-27 04:34:22,172 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-09-27 04:34:22,172 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-09-27 04:34:22,172 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-09-27 04:34:22,173 [ scc.repo] DEBUG ## PRs found:
2024-09-27 04:34:22,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-09-27 04:34:22,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-09-27 04:34:22,993 [ scc.repo] DEBUG # ... Include label: dependencies
2024-09-27 04:34:22,993 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-09-27 04:34:22,993 [ scc.repo] DEBUG ## Branches found:
2024-09-27 04:34:22,994 [ scc.git] DEBUG Get sha1 of %s
2024-09-27 04:34:22,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:34:22,999 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-27 04:34:23,003 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-27 04:34:23,003 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-27 04:34:23,008 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-27 04:34:23,012 [ scc.git] DEBUG Already up to date.
2024-09-27 04:34:23,013 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-09-27 04:34:23,306 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-09-27 04:34:23,306 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-09-27 04:34:23,311 [ scc.git] DEBUG ## Unique users: []
2024-09-27 04:34:23,311 [ scc.git] DEBUG Get sha1 of %s
2024-09-27 04:34:23,311 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:34:23,314 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-09-27 04:34:23,378 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:34:23,382 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-09-27 04:34:23,391 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-27 04:34:23,393 [ scc.git] DEBUG omero-py | 2 +-
2024-09-27 04:34:23,393 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-09-27 04:34:23,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:34:23,535 [ scc.git] DEBUG Calling 'git submodule update'
2024-09-27 04:34:23,649 [ scc.git] DEBUG Submodule path 'omero-py': checked out '4fd72efaa8cdbec9da98e1d28678af16878a86ba'
2024-09-27 04:34:23,650 [ scc.git] DEBUG Get sha1 of %s
2024-09-27 04:34:23,650 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:34:23,654 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-09-27 04:34:24,073 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f81f75300a0> has no local changes
2024-09-27 04:34:24,073 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Generated by OMERO-python-superbuild-push#186 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/186/)'
2024-09-27 04:34:24,100 [ scc.git] DEBUG [detached HEAD e7d20d0] merge master -Dorg -Snone
2024-09-27 04:34:24,100 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-09-27 04:34:24,101 [ scc.merge] INFO Already up to date.
2024-09-27 04:34:24,101 [ scc.merge] INFO
2024-09-27 04:34:24,101 [ scc.merge] INFO Merged PRs:
2024-09-27 04:34:24,101 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-09-27 04:34:24,101 [ scc.merge] INFO
2024-09-27 04:34:24,101 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-09-27 04:34:24,101 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-09-27 04:34:26,455 [ scc.config] DEBUG Found github.token
2024-09-27 04:34:26,458 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-09-27 04:34:26,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:34:27,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:34:27,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-09-27 04:34:27,392 [ scc.gh] DEBUG 4609 remaining from 5000 (Reset at 05:09
2024-09-27 04:34:27,393 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-27 04:34:27,399 [ scc.git] DEBUG Check current status
2024-09-27 04:34:27,399 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-27 04:34:27,404 [ scc.git] DEBUG e7d20d0 merge master -Dorg -Snone
2024-09-27 04:34:27,404 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-27 04:34:27,447 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-09-27 04:34:27,450 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-09-27 04:34:27,453 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-09-27 04:34:27,457 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-09-27 04:34:27,460 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-09-27 04:34:27,466 [ scc.config] DEBUG Found remote.origin.url
2024-09-27 04:34:27,466 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-09-27 04:34:27,469 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-09-27 04:34:27,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-09-27 04:34:28,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-27 04:34:28,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-27 04:34:29,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-27 04:34:29,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-27 04:34:29,517 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-27 04:34:29,571 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-09-27 04:34:29,571 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-27 04:34:29,576 [ scc.git] DEBUG Check current status
2024-09-27 04:34:29,576 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-27 04:34:29,582 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-09-27 04:34:29,582 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-27 04:34:29,622 [ scc.config] DEBUG Found remote.origin.url
2024-09-27 04:34:30,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-09-27 04:34:30,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-27 04:34:30,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-27 04:34:31,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-27 04:34:31,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-27 04:34:31,649 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-27 04:34:31,692 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-27 04:34:31,693 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-09-27 04:34:31,693 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-27 04:34:31,697 [ scc.git] DEBUG Check current status
2024-09-27 04:34:31,697 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-27 04:34:31,700 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-09-27 04:34:31,701 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-27 04:34:31,747 [ scc.config] DEBUG Found remote.origin.url
2024-09-27 04:34:32,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-09-27 04:34:32,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-27 04:34:32,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-27 04:34:33,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-27 04:34:33,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-27 04:34:33,794 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-27 04:34:33,834 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-27 04:34:33,835 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-09-27 04:34:33,835 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-27 04:34:33,840 [ scc.git] DEBUG Check current status
2024-09-27 04:34:33,840 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-27 04:34:33,845 [ scc.git] DEBUG 4fd72efa Bump version: 5.19.5 → 5.19.6.dev0
2024-09-27 04:34:33,845 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-27 04:34:33,886 [ scc.config] DEBUG Found remote.origin.url
2024-09-27 04:34:34,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-09-27 04:34:34,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-27 04:34:35,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-27 04:34:35,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-27 04:34:35,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-27 04:34:35,901 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-27 04:34:35,944 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-27 04:34:35,945 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-09-27 04:34:35,945 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-27 04:34:35,950 [ scc.git] DEBUG Check current status
2024-09-27 04:34:35,950 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-27 04:34:35,954 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-09-27 04:34:35,955 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-27 04:34:36,002 [ scc.config] DEBUG Found remote.origin.url
2024-09-27 04:34:36,003 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-09-27 04:34:36,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-09-27 04:34:36,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-27 04:34:37,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-27 04:34:37,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-27 04:34:37,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-27 04:34:37,973 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-27 04:34:38,012 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-27 04:34:38,012 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-09-27 04:34:38,013 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-27 04:34:38,017 [ scc.git] DEBUG Check current status
2024-09-27 04:34:38,017 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-27 04:34:38,021 [ scc.git] DEBUG da5b7d11f Bump version: 5.27.2 → 5.27.3.dev0
2024-09-27 04:34:38,021 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-27 04:34:38,061 [ scc.config] DEBUG Found remote.origin.url
2024-09-27 04:34:38,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-09-27 04:34:38,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-27 04:34:39,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-27 04:34:39,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-27 04:34:40,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-27 04:34:40,076 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-27 04:34:40,118 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-27 04:34:40,118 [ scc.git] DEBUG Resetting...
2024-09-27 04:34:40,118 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-09-27 04:34:40,125 [ scc.git] DEBUG HEAD is now at e7d20d0 merge master -Dorg -Snone
2024-09-27 04:34:40,125 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-09-27 04:34:40,178 [ scc.git] DEBUG Check current status
2024-09-27 04:34:40,178 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-27 04:34:40,183 [ scc.git] DEBUG e7d20d0 merge master -Dorg -Snone
2024-09-27 04:34:40,183 [ scc.git] DEBUG Calling 'git submodule status'
2024-09-27 04:34:40,223 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-09-27 04:34:40,225 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-09-27 04:34:40,229 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-09-27 04:34:40,232 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-09-27 04:34:40,236 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-09-27 04:34:40,237 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-09-27 04:34:40,237 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-09-27 04:34:40,237 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-09-27 04:34:40,237 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-09-27 04:34:40,237 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-09-27 04:34:40,237 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-09-27 04:34:40,237 [ scc.repo] DEBUG ## PRs found:
2024-09-27 04:34:40,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-09-27 04:34:40,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-09-27 04:34:40,986 [ scc.repo] DEBUG # ... Include label: dependencies
2024-09-27 04:34:41,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-09-27 04:34:41,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-27 04:34:42,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-09-27 04:34:42,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/9660559833988d271074de56e54f2462a7be74e9?per_page=1 HTTP/1.1" 200 2
2024-09-27 04:34:42,844 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-09-27 04:34:42,844 [ scc.repo] DEBUG ## Branches found:
2024-09-27 04:34:42,844 [ scc.git] DEBUG Get sha1 of %s
2024-09-27 04:34:42,844 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:34:42,849 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-27 04:34:42,853 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-27 04:34:42,853 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-27 04:34:42,858 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-27 04:34:42,863 [ scc.git] DEBUG Already up to date.
2024-09-27 04:34:42,863 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-09-27 04:34:43,162 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-09-27 04:34:43,162 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-09-27 04:34:43,169 [ scc.git] DEBUG ## Unique users: []
2024-09-27 04:34:43,169 [ scc.git] DEBUG Get sha1 of %s
2024-09-27 04:34:43,169 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:34:43,174 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-09-27 04:34:43,178 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:34:43,181 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-09-27 04:34:43,185 [ scc.git] DEBUG Already up to date.
2024-09-27 04:34:43,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:34:43,327 [ scc.git] DEBUG Calling 'git submodule update'
2024-09-27 04:34:43,370 [ scc.git] DEBUG Get sha1 of %s
2024-09-27 04:34:43,370 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:34:43,375 [ scc.repo] DEBUG ## PRs found:
2024-09-27 04:34:43,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-09-27 04:34:44,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-09-27 04:34:44,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-09-27 04:34:45,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-09-27 04:34:45,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-27 04:34:46,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-09-27 04:34:46,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-09-27 04:34:46,667 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-09-27 04:34:46,667 [ scc.repo] DEBUG ## Branches found:
2024-09-27 04:34:46,667 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-09-27 04:34:46,667 [ scc.git] DEBUG Get sha1 of %s
2024-09-27 04:34:46,667 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:34:46,672 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-27 04:34:46,676 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-27 04:34:46,676 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-27 04:34:46,681 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-27 04:34:46,687 [ scc.git] DEBUG Already up to date.
2024-09-27 04:34:46,687 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-09-27 04:34:47,038 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-09-27 04:34:47,038 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-09-27 04:34:47,044 [ scc.git] DEBUG ## Unique users: []
2024-09-27 04:34:47,044 [ scc.git] DEBUG Get sha1 of %s
2024-09-27 04:34:47,044 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:34:47,049 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-09-27 04:34:47,054 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:34:47,058 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-09-27 04:34:47,844 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-09-27 04:34:47,844 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-09-27 04:34:47,844 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-09-27 04:34:47,844 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-09-27 04:34:47,844 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-09-27 04:34:47,844 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-09-27 04:34:47,844 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-09-27 04:34:47,844 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-09-27 04:34:47,844 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-09-27 04:34:47,845 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-27 04:34:47,849 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-09-27 04:34:47,849 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-09-27 04:34:47,849 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-09-27 04:34:47,849 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-09-27 04:34:47,849 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-09-27 04:34:47,849 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-09-27 04:34:47,849 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-09-27 04:34:47,851 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-09-27 04:34:47,851 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-09-27 04:34:47,851 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-09-27 04:34:47,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:34:47,985 [ scc.git] DEBUG Calling 'git submodule update'
2024-09-27 04:34:48,046 [ scc.git] DEBUG Get sha1 of %s
2024-09-27 04:34:48,047 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:34:48,052 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-27 04:34:48,104 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-09-27 04:34:48,111 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa53dfd4fa0> has no local changes
2024-09-27 04:34:48,112 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#186 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/186/)'
2024-09-27 04:34:48,120 [ scc.git] DEBUG [detached HEAD 7ab3c77] merge master -Dorg -Ssuccess-only
2024-09-27 04:34:48,121 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-27 04:34:48,121 [ scc.repo] DEBUG ## PRs found:
2024-09-27 04:34:48,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-09-27 04:34:48,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-09-27 04:34:49,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-09-27 04:34:49,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-09-27 04:34:50,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-27 04:34:50,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-09-27 04:34:51,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-09-27 04:34:51,264 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-09-27 04:34:51,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-09-27 04:34:52,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-09-27 04:34:52,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-09-27 04:34:53,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-09-27 04:34:53,037 [ scc.repo] DEBUG ## Branches found:
2024-09-27 04:34:53,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-09-27 04:34:53,037 [ scc.git] DEBUG Get sha1 of %s
2024-09-27 04:34:53,037 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:34:53,042 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-27 04:34:53,048 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-27 04:34:53,048 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-27 04:34:53,054 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-27 04:34:53,060 [ scc.git] DEBUG Already up to date.
2024-09-27 04:34:53,060 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-09-27 04:34:53,486 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-09-27 04:34:53,486 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-09-27 04:34:53,491 [ scc.git] DEBUG ## Unique users: []
2024-09-27 04:34:53,491 [ scc.git] DEBUG Get sha1 of %s
2024-09-27 04:34:53,491 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:34:53,496 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-09-27 04:34:53,501 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:34:53,507 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-09-27 04:34:53,608 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-09-27 04:34:53,609 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-27 04:34:53,613 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-09-27 04:34:53,613 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-09-27 04:34:53,613 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-09-27 04:34:53,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:34:53,752 [ scc.git] DEBUG Calling 'git submodule update'
2024-09-27 04:34:53,796 [ scc.git] DEBUG Get sha1 of %s
2024-09-27 04:34:53,796 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:34:53,801 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-27 04:34:53,845 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-09-27 04:34:53,852 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa53dfd4ca0> has no local changes
2024-09-27 04:34:53,852 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#186 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/186/)'
2024-09-27 04:34:53,862 [ scc.git] DEBUG [detached HEAD 31d7a0b] merge master -Dorg -Ssuccess-only
2024-09-27 04:34:53,863 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-27 04:34:53,863 [ scc.repo] DEBUG ## PRs found:
2024-09-27 04:34:54,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-09-27 04:34:54,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/431 HTTP/1.1" 200 None
2024-09-27 04:34:55,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-09-27 04:34:55,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-27 04:34:56,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-27 04:34:56,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-09-27 04:34:57,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0e500ec05bf9227b66b28a480b40e0936241d953?per_page=1 HTTP/1.1" 200 None
2024-09-27 04:34:57,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-09-27 04:34:58,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/status HTTP/1.1" 200 None
2024-09-27 04:34:58,090 [ scc.repo] DEBUG - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-09-27 04:34:58,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None
2024-09-27 04:34:58,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None
2024-09-27 04:34:59,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None
2024-09-27 04:34:59,443 [ scc.repo] DEBUG # ... Include label: include
2024-09-27 04:34:59,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fb11dc0ca13c6ba885e09d623e2ccc05f5fa9b65 HTTP/1.1" 200 None
2024-09-27 04:35:00,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fb11dc0ca13c6ba885e09d623e2ccc05f5fa9b65/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-27 04:35:00,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fb11dc0ca13c6ba885e09d623e2ccc05f5fa9b65/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-27 04:35:01,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fb11dc0ca13c6ba885e09d623e2ccc05f5fa9b65 HTTP/1.1" 200 None
2024-09-27 04:35:01,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/fb11dc0ca13c6ba885e09d623e2ccc05f5fa9b65?per_page=1 HTTP/1.1" 200 None
2024-09-27 04:35:02,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fb11dc0ca13c6ba885e09d623e2ccc05f5fa9b65 HTTP/1.1" 200 None
2024-09-27 04:35:02,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fb11dc0ca13c6ba885e09d623e2ccc05f5fa9b65/status HTTP/1.1" 200 None
2024-09-27 04:35:02,616 [ scc.repo] DEBUG - PR 427 Rdornier 'Add fileset folder creation'
2024-09-27 04:35:03,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-09-27 04:35:03,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-09-27 04:35:04,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-09-27 04:35:04,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-27 04:35:04,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-27 04:35:05,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-09-27 04:35:05,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-09-27 04:35:06,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-09-27 04:35:06,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-09-27 04:35:06,813 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-09-27 04:35:07,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-09-27 04:35:07,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-09-27 04:35:08,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-09-27 04:35:08,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-27 04:35:09,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-27 04:35:09,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-09-27 04:35:10,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-09-27 04:35:10,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-27 04:35:11,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-27 04:35:11,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-09-27 04:35:12,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-09-27 04:35:12,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-09-27 04:35:12,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-09-27 04:35:12,991 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-09-27 04:35:13,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-09-27 04:35:13,426 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-09-27 04:35:13,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-09-27 04:35:14,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-09-27 04:35:14,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-09-27 04:35:15,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-27 04:35:15,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-09-27 04:35:16,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-09-27 04:35:16,060 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-09-27 04:35:16,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-09-27 04:35:16,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-09-27 04:35:17,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-09-27 04:35:17,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-27 04:35:18,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-27 04:35:18,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-09-27 04:35:19,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-09-27 04:35:19,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-09-27 04:35:20,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-09-27 04:35:20,150 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-09-27 04:35:20,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-09-27 04:35:21,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-09-27 04:35:21,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-09-27 04:35:21,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-09-27 04:35:22,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-09-27 04:35:22,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-27 04:35:23,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-09-27 04:35:23,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-09-27 04:35:23,775 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-09-27 04:35:24,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-09-27 04:35:24,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-09-27 04:35:25,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-27 04:35:25,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-09-27 04:35:26,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-09-27 04:35:26,005 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-09-27 04:35:26,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-09-27 04:35:26,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-09-27 04:35:27,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-09-27 04:35:27,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-27 04:35:28,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-09-27 04:35:28,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-09-27 04:35:28,893 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-09-27 04:35:29,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-09-27 04:35:29,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-09-27 04:35:30,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-09-27 04:35:30,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-27 04:35:31,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-09-27 04:35:31,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-09-27 04:35:31,613 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-09-27 04:35:32,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-09-27 04:35:32,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-09-27 04:35:32,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-09-27 04:35:33,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-09-27 04:35:33,431 [ scc.repo] DEBUG ## Branches found:
2024-09-27 04:35:33,431 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-09-27 04:35:33,432 [ scc.git] DEBUG Get sha1 of %s
2024-09-27 04:35:33,432 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:35:33,437 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-27 04:35:33,442 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-27 04:35:33,442 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-27 04:35:33,448 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-27 04:35:33,454 [ scc.git] DEBUG Already up to date.
2024-09-27 04:35:33,454 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-09-27 04:35:33,810 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-27 04:35:33,810 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-09-27 04:35:33,816 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-09-27 04:35:34,206 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-27 04:35:34,207 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-09-27 04:35:34,212 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-09-27 04:35:34,626 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-27 04:35:34,626 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-09-27 04:35:34,632 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-09-27 04:35:34,916 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-27 04:35:34,916 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-09-27 04:35:34,921 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-09-27 04:35:35,353 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-27 04:35:35,353 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-09-27 04:35:35,358 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-09-27 04:35:35,694 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-27 04:35:35,695 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-09-27 04:35:35,700 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-09-27 04:35:35,990 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-27 04:35:35,990 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-09-27 04:35:35,995 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-09-27 04:35:36,393 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-27 04:35:36,393 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-09-27 04:35:36,398 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head'
2024-09-27 04:35:36,794 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-27 04:35:36,795 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD
2024-09-27 04:35:36,799 [ scc.git] DEBUG Calling 'git fetch origin pull/431/head'
2024-09-27 04:35:37,077 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-09-27 04:35:37,078 [ scc.git] DEBUG * branch refs/pull/431/head -> FETCH_HEAD
2024-09-27 04:35:37,083 [ scc.git] DEBUG ## Unique users: []
2024-09-27 04:35:37,083 [ scc.git] DEBUG Get sha1 of %s
2024-09-27 04:35:37,083 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:35:37,087 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-09-27 04:35:37,099 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:35:37,103 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-09-27 04:35:37,224 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-09-27 04:35:37,225 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-09-27 04:35:37,226 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-27 04:35:37,230 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-09-27 04:35:37,231 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-09-27 04:35:37,231 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-09-27 04:35:37,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:35:37,372 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-09-27 04:35:37,385 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:35:37,391 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-09-27 04:35:37,657 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-09-27 04:35:37,657 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-09-27 04:35:37,658 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-27 04:35:37,665 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-09-27 04:35:37,665 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-09-27 04:35:37,665 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-09-27 04:35:37,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:35:37,793 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-09-27 04:35:37,805 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:35:37,810 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-09-27 04:35:37,836 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-09-27 04:35:37,837 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-27 04:35:37,840 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-09-27 04:35:37,840 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-09-27 04:35:38,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:35:38,175 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-09-27 04:35:38,187 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:35:38,192 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-09-27 04:35:38,295 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-09-27 04:35:38,296 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-09-27 04:35:38,297 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-27 04:35:38,301 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-09-27 04:35:38,301 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-09-27 04:35:38,301 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-09-27 04:35:38,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:35:38,567 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-09-27 04:35:38,580 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:35:38,586 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-09-27 04:35:38,615 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-27 04:35:38,618 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-09-27 04:35:38,618 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-09-27 04:35:38,618 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-09-27 04:35:38,618 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-09-27 04:35:38,618 [ scc.git] DEBUG create mode 100644 connect.py
2024-09-27 04:35:38,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:35:38,956 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-09-27 04:35:38,968 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:35:38,973 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-09-27 04:35:38,992 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-09-27 04:35:38,994 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-27 04:35:38,996 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-09-27 04:35:38,997 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-09-27 04:35:39,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:35:39,346 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-09-27 04:35:39,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:35:39,363 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-09-27 04:35:39,440 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-09-27 04:35:39,441 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-27 04:35:39,445 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-09-27 04:35:39,445 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-09-27 04:35:39,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:35:39,768 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-09-27 04:35:39,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:35:39,784 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-09-27 04:35:39,835 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-09-27 04:35:39,836 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-27 04:35:39,843 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-09-27 04:35:39,843 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-09-27 04:35:40,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:35:40,148 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb11dc0ca13c6ba885e09d623e2ccc05f5fa9b65'
2024-09-27 04:35:40,160 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:35:40,164 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) fb11dc0ca13c6ba885e09d623e2ccc05f5fa9b65'
2024-09-27 04:35:40,201 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-27 04:35:40,204 [ scc.git] DEBUG .gitignore | 1 +
2024-09-27 04:35:40,204 [ scc.git] DEBUG src/omero/plugins/download.py | 4 +++-
2024-09-27 04:35:40,204 [ scc.git] DEBUG 2 files changed, 4 insertions(+), 1 deletion(-)
2024-09-27 04:35:40,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:35:40,575 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0e500ec05bf9227b66b28a480b40e0936241d953'
2024-09-27 04:35:40,587 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:35:40,592 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 431 (omero.HdfStorage.update: add size check on data.rowNumbers) 0e500ec05bf9227b66b28a480b40e0936241d953'
2024-09-27 04:35:40,611 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-27 04:35:40,613 [ scc.git] DEBUG src/omero/hdfstorageV2.py | 1 +
2024-09-27 04:35:40,613 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2024-09-27 04:35:40,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:35:40,971 [ scc.git] DEBUG Calling 'git submodule update'
2024-09-27 04:35:41,010 [ scc.git] DEBUG Get sha1 of %s
2024-09-27 04:35:41,011 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:35:41,015 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-27 04:35:41,053 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-09-27 04:35:41,060 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa53cf7ff40> has no local changes
2024-09-27 04:35:41,061 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Generated by OMERO-python-superbuild-push#186 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/186/)'
2024-09-27 04:35:41,069 [ scc.git] DEBUG [detached HEAD 1c0b805d] merge master -Dorg -Ssuccess-only
2024-09-27 04:35:41,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-27 04:35:41,070 [ scc.git] INFO Overriding base-branch from master to develop
2024-09-27 04:35:41,070 [ scc.repo] DEBUG ## PRs found:
2024-09-27 04:35:41,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-09-27 04:35:42,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-09-27 04:35:42,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-09-27 04:35:43,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-27 04:35:43,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-27 04:35:44,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-09-27 04:35:44,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-09-27 04:35:44,446 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-09-27 04:35:44,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-09-27 04:35:45,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-09-27 04:35:45,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-09-27 04:35:46,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-09-27 04:35:46,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-09-27 04:35:47,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-09-27 04:35:47,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-09-27 04:35:48,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-27 04:35:48,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-09-27 04:35:49,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-09-27 04:35:49,131 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-09-27 04:35:49,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-09-27 04:35:50,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-09-27 04:35:50,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-09-27 04:35:51,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-09-27 04:35:51,080 [ scc.repo] DEBUG ## Branches found:
2024-09-27 04:35:51,080 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-09-27 04:35:51,080 [ scc.git] DEBUG Get sha1 of %s
2024-09-27 04:35:51,080 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:35:51,085 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-09-27 04:35:51,089 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-27 04:35:51,089 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-09-27 04:35:51,094 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-09-27 04:35:51,100 [ scc.git] DEBUG Already up to date.
2024-09-27 04:35:51,100 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-09-27 04:35:51,561 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-09-27 04:35:51,562 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-09-27 04:35:51,567 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-09-27 04:35:52,255 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-09-27 04:35:52,255 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-09-27 04:35:52,260 [ scc.git] DEBUG ## Unique users: []
2024-09-27 04:35:52,260 [ scc.git] DEBUG Get sha1 of %s
2024-09-27 04:35:52,260 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:35:52,264 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-09-27 04:35:52,270 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:35:52,274 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-09-27 04:35:52,393 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-09-27 04:35:52,393 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-09-27 04:35:52,393 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-09-27 04:35:52,394 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-09-27 04:35:52,400 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-09-27 04:35:52,405 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-09-27 04:35:52,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:35:52,551 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-09-27 04:35:52,559 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-09-27 04:35:52,565 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#186](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/186/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/186/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-09-27 04:35:52,570 [ scc.config] DEBUG Found github.token
2024-09-27 04:35:52,570 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-09-27 04:35:52,570 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-09-27 04:35:52,575 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:35:52,585 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-09-27 04:35:52,595 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-27 04:35:52,597 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-09-27 04:35:52,597 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-09-27 04:35:52,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:35:52,931 [ scc.git] DEBUG Calling 'git submodule update'
2024-09-27 04:35:52,973 [ scc.git] DEBUG Get sha1 of %s
2024-09-27 04:35:52,973 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:35:52,978 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-27 04:35:53,019 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-09-27 04:35:53,025 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa53dfd4610> has no local changes
2024-09-27 04:35:53,025 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#186 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/186/)'
2024-09-27 04:35:53,033 [ scc.git] DEBUG [detached HEAD 9f3a43d] merge master -Dorg -Ssuccess-only
2024-09-27 04:35:53,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-27 04:35:53,033 [ scc.repo] DEBUG ## PRs found:
2024-09-27 04:35:53,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-09-27 04:35:53,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583 HTTP/1.1" 200 None
2024-09-27 04:35:54,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-09-27 04:35:54,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-27 04:35:55,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-27 04:35:55,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-09-27 04:35:56,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/aa50f469842b9687c74df8765d72241e6e37d32c?per_page=1 HTTP/1.1" 200 None
2024-09-27 04:35:56,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-09-27 04:35:57,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/status HTTP/1.1" 200 None
2024-09-27 04:35:57,143 [ scc.repo] DEBUG - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-09-27 04:35:57,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581 HTTP/1.1" 200 None
2024-09-27 04:35:58,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581/comments HTTP/1.1" 200 None
2024-09-27 04:35:58,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/580 HTTP/1.1" 200 None
2024-09-27 04:35:58,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-09-27 04:35:59,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-27 04:35:59,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-27 04:36:00,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-09-27 04:36:00,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc?per_page=1 HTTP/1.1" 200 None
2024-09-27 04:36:01,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-09-27 04:36:01,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/status HTTP/1.1" 200 None
2024-09-27 04:36:01,652 [ scc.repo] DEBUG - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-09-27 04:36:02,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568 HTTP/1.1" 200 None
2024-09-27 04:36:02,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568/comments HTTP/1.1" 200 None
2024-09-27 04:36:03,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-09-27 04:36:03,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-09-27 04:36:03,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-09-27 04:36:04,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-09-27 04:36:04,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-09-27 04:36:05,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-27 04:36:05,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-27 04:36:06,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-09-27 04:36:06,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-09-27 04:36:07,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-09-27 04:36:07,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-09-27 04:36:07,694 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-09-27 04:36:08,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-09-27 04:36:08,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-09-27 04:36:09,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-09-27 04:36:09,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-27 04:36:10,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-27 04:36:10,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-09-27 04:36:11,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-09-27 04:36:11,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-09-27 04:36:11,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-09-27 04:36:11,886 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-09-27 04:36:12,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-09-27 04:36:12,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-09-27 04:36:13,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-09-27 04:36:13,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-27 04:36:14,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-27 04:36:14,325 [ scc.repo] DEBUG ## Branches found:
2024-09-27 04:36:14,325 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-09-27 04:36:14,326 [ scc.git] DEBUG Get sha1 of %s
2024-09-27 04:36:14,326 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:36:14,331 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-27 04:36:14,335 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-27 04:36:14,335 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-27 04:36:14,340 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-27 04:36:14,344 [ scc.git] DEBUG Already up to date.
2024-09-27 04:36:14,344 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-09-27 04:36:15,653 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-09-27 04:36:15,653 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-09-27 04:36:15,658 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-09-27 04:36:15,963 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-09-27 04:36:15,963 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-09-27 04:36:15,968 [ scc.git] DEBUG Calling 'git fetch origin pull/580/head'
2024-09-27 04:36:16,294 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-09-27 04:36:16,294 [ scc.git] DEBUG * branch refs/pull/580/head -> FETCH_HEAD
2024-09-27 04:36:16,299 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head'
2024-09-27 04:36:16,610 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-09-27 04:36:16,610 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD
2024-09-27 04:36:16,615 [ scc.git] DEBUG ## Unique users: []
2024-09-27 04:36:16,615 [ scc.git] DEBUG Get sha1 of %s
2024-09-27 04:36:16,616 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:36:16,622 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-09-27 04:36:16,629 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:36:16,632 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-09-27 04:36:16,649 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-09-27 04:36:16,649 [ scc.git] DEBUG Auto-merging setup.py
2024-09-27 04:36:16,651 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-27 04:36:16,655 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-09-27 04:36:16,655 [ scc.git] DEBUG setup.py | 1 +
2024-09-27 04:36:16,655 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-09-27 04:36:16,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:36:16,804 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-09-27 04:36:16,812 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:36:16,817 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-09-27 04:36:17,000 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-09-27 04:36:17,000 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-09-27 04:36:17,001 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-27 04:36:17,005 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-09-27 04:36:17,005 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-09-27 04:36:17,005 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-09-27 04:36:17,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:36:17,182 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-09-27 04:36:17,191 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:36:17,196 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 580 (omeroweb.webgateway.obj_id_bitmask: handle empty query results) 1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-09-27 04:36:17,354 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-27 04:36:17,358 [ scc.git] DEBUG omeroweb/webgateway/views.py | 6 ++++++
2024-09-27 04:36:17,358 [ scc.git] DEBUG 1 file changed, 6 insertions(+)
2024-09-27 04:36:17,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:36:17,573 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aa50f469842b9687c74df8765d72241e6e37d32c'
2024-09-27 04:36:17,582 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:36:17,587 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Allow users to click a group name to show data from all users in that group) aa50f469842b9687c74df8765d72241e6e37d32c'
2024-09-27 04:36:17,675 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-27 04:36:17,679 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_content.html | 6 +++++-
2024-09-27 04:36:17,679 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_dropdown2.html | 2 --
2024-09-27 04:36:17,679 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 3 deletions(-)
2024-09-27 04:36:18,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:36:18,065 [ scc.git] DEBUG Calling 'git submodule update'
2024-09-27 04:36:18,108 [ scc.git] DEBUG Get sha1 of %s
2024-09-27 04:36:18,109 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-27 04:36:18,114 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-27 04:36:18,157 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-09-27 04:36:18,167 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa53c6d4b20> has no local changes
2024-09-27 04:36:18,167 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
Generated by OMERO-python-superbuild-push#186 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/186/)'
2024-09-27 04:36:18,179 [ scc.git] DEBUG [detached HEAD 46e9103d8] merge master -Dorg -Ssuccess-only
2024-09-27 04:36:18,180 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-27 04:36:18,180 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-27 04:36:18,234 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-09-27 04:36:18,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:36:18,464 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-09-27 04:36:18,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:36:18,839 [ scc.config] DEBUG Found submodule.omero-py.url
2024-09-27 04:36:19,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:36:19,228 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-09-27 04:36:19,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:36:19,626 [ scc.config] DEBUG Found submodule.omero-web.url
2024-09-27 04:36:20,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-27 04:36:20,019 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-09-27 04:36:20,044 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa53e5340a0> has local changes
2024-09-27 04:36:20,044 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
Generated by OMERO-python-superbuild-push#186 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/186/)'
2024-09-27 04:36:20,053 [ scc.git] DEBUG [detached HEAD a501926] merge master -Dorg -Ssuccess-only
2024-09-27 04:36:20,054 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-09-27 04:36:20,054 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-09-27 04:36:20,054 [ scc.merge] INFO Already up to date.
2024-09-27 04:36:20,054 [ scc.merge] INFO
2024-09-27 04:36:20,054 [ scc.merge] INFO Merged PRs:
2024-09-27 04:36:20,054 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-09-27 04:36:20,054 [ scc.merge] INFO
2024-09-27 04:36:20,054 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-09-27 04:36:20,054 [ scc.merge] INFO Already up to date.
2024-09-27 04:36:20,054 [ scc.merge] INFO
2024-09-27 04:36:20,054 [ scc.merge] INFO Merged PRs:
2024-09-27 04:36:20,054 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-09-27 04:36:20,054 [ scc.merge] INFO
2024-09-27 04:36:20,054 [ scc.merge] INFO Repository: ome/omero-marshal
2024-09-27 04:36:20,054 [ scc.merge] INFO Excluded PRs:
2024-09-27 04:36:20,054 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-09-27 04:36:20,054 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-09-27 04:36:20,054 [ scc.merge] INFO Already up to date.
2024-09-27 04:36:20,054 [ scc.merge] INFO
2024-09-27 04:36:20,054 [ scc.merge] INFO Merged PRs:
2024-09-27 04:36:20,054 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-09-27 04:36:20,054 [ scc.merge] INFO
2024-09-27 04:36:20,054 [ scc.merge] INFO Repository: ome/omero-py
2024-09-27 04:36:20,054 [ scc.merge] INFO Excluded PRs:
2024-09-27 04:36:20,054 [ scc.merge] INFO - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
2024-09-27 04:36:20,054 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-09-27 04:36:20,055 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-09-27 04:36:20,055 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-09-27 04:36:20,055 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-09-27 04:36:20,055 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-09-27 04:36:20,055 [ scc.merge] INFO Already up to date.
2024-09-27 04:36:20,055 [ scc.merge] INFO
2024-09-27 04:36:20,055 [ scc.merge] INFO Merged PRs:
2024-09-27 04:36:20,055 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-09-27 04:36:20,055 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-09-27 04:36:20,055 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-09-27 04:36:20,055 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-09-27 04:36:20,055 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-09-27 04:36:20,055 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-09-27 04:36:20,055 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-09-27 04:36:20,055 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-09-27 04:36:20,055 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation'
2024-09-27 04:36:20,055 [ scc.merge] INFO - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-09-27 04:36:20,055 [ scc.merge] INFO
2024-09-27 04:36:20,055 [ scc.merge] INFO Repository: ome/omero-scripts
2024-09-27 04:36:20,055 [ scc.merge] INFO Excluded PRs:
2024-09-27 04:36:20,055 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-09-27 04:36:20,055 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-09-27 04:36:20,055 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-09-27 04:36:20,055 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-09-27 04:36:20,055 [ scc.merge] INFO Already up to date.
2024-09-27 04:36:20,055 [ scc.merge] INFO
2024-09-27 04:36:20,055 [ scc.merge] INFO Merged PRs:
2024-09-27 04:36:20,055 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-09-27 04:36:20,055 [ scc.merge] INFO
2024-09-27 04:36:20,055 [ scc.merge] INFO Conflicting PRs (not included):
2024-09-27 04:36:20,055 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-09-27 04:36:20,055 [ scc.merge] INFO
2024-09-27 04:36:20,055 [ scc.merge] INFO Repository: ome/omero-web
2024-09-27 04:36:20,055 [ scc.merge] INFO Excluded PRs:
2024-09-27 04:36:20,055 [ scc.merge] INFO - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
2024-09-27 04:36:20,056 [ scc.merge] INFO - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
2024-09-27 04:36:20,056 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-09-27 04:36:20,056 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-09-27 04:36:20,056 [ scc.merge] INFO Already up to date.
2024-09-27 04:36:20,056 [ scc.merge] INFO
2024-09-27 04:36:20,056 [ scc.merge] INFO Merged PRs:
2024-09-27 04:36:20,056 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-09-27 04:36:20,056 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-09-27 04:36:20,056 [ scc.merge] INFO - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-09-27 04:36:20,056 [ scc.merge] INFO - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-09-27 04:36:20,056 [ scc.merge] INFO
2024-09-27 04:36:20,056 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-09-27 04:36:20,056 [ scc.git] DEBUG Calling 'git remote'
2024-09-27 04:36:20,060 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-09-27 04:36:20,060 [ scc.git] DEBUG Calling 'git remote'
2024-09-27 04:36:20,065 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-27 04:36:20,065 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-09-27 04:36:20,065 [ scc.git] DEBUG Calling 'git remote'
2024-09-27 04:36:20,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-27 04:36:20,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-09-27 04:36:20,070 [ scc.git] DEBUG Calling 'git remote'
2024-09-27 04:36:20,074 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-27 04:36:20,074 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-09-27 04:36:20,075 [ scc.git] DEBUG Calling 'git remote'
2024-09-27 04:36:20,078 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-09-27 04:36:20,078 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-09-27 04:36:20,079 [ scc.git] DEBUG Calling 'git remote'
2024-09-27 04:36:20,082 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 4fd72efa
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from da5b7d11f
nothing to commit, working tree clean
HEAD detached from e849d72
nothing to commit, working tree clean
2024-09-27 04:36:47,606 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
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