Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-10-01 00:32:50,334 [ scc.config] DEBUG Found github.token
2024-10-01 00:32:50,336 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-01 00:32:50,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:32:50,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:32:51,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-01 00:32:51,272 [ scc.gh] DEBUG 4622 remaining from 5000 (Reset at 01:10
2024-10-01 00:32:51,273 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-01 00:32:51,279 [ scc.git] DEBUG Check current status
2024-10-01 00:32:51,279 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-01 00:32:51,283 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-01 00:32:51,283 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-01 00:32:51,335 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-01 00:32:51,338 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-01 00:32:51,343 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-01 00:32:51,347 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-01 00:32:51,395 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-01 00:32:51,401 [ scc.config] DEBUG Found remote.origin.url
2024-10-01 00:32:51,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-01 00:32:52,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-01 00:32:52,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-01 00:32:52,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-01 00:32:53,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-01 00:32:53,403 [ scc.git] DEBUG Resetting...
2024-10-01 00:32:53,403 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-01 00:32:53,410 [ scc.git] DEBUG HEAD is now at e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-01 00:32:53,411 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-01 00:32:53,469 [ scc.git] DEBUG Check current status
2024-10-01 00:32:53,469 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-01 00:32:53,476 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-01 00:32:53,476 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-01 00:32:53,537 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-01 00:32:53,541 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-01 00:32:53,551 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-01 00:32:53,557 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-01 00:32:53,561 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-01 00:32:53,562 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-01 00:32:53,562 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-01 00:32:53,562 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-01 00:32:53,562 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-01 00:32:53,562 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-01 00:32:53,562 [ scc.repo] DEBUG ## PRs found:
2024-10-01 00:32:53,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-01 00:32:54,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-01 00:32:54,335 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-01 00:32:54,335 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-01 00:32:54,336 [ scc.repo] DEBUG ## Branches found:
2024-10-01 00:32:54,336 [ scc.git] DEBUG Get sha1 of %s
2024-10-01 00:32:54,336 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:32:54,341 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-01 00:32:54,345 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-01 00:32:54,345 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-01 00:32:54,350 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-01 00:32:54,362 [ scc.git] DEBUG Already up to date.
2024-10-01 00:32:54,364 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-01 00:32:54,687 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-01 00:32:54,687 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-01 00:32:54,693 [ scc.git] DEBUG ## Unique users: []
2024-10-01 00:32:54,694 [ scc.git] DEBUG Get sha1 of %s
2024-10-01 00:32:54,694 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:32:54,698 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-01 00:32:54,759 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:32:54,767 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-01 00:32:54,781 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-01 00:32:54,784 [ scc.git] DEBUG omero-py | 2 +-
2024-10-01 00:32:54,784 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-10-01 00:32:54,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:32:54,918 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-01 00:32:55,195 [ scc.git] DEBUG Submodule path 'omero-py': checked out '4fd72efaa8cdbec9da98e1d28678af16878a86ba'
2024-10-01 00:32:55,196 [ scc.git] DEBUG Get sha1 of %s
2024-10-01 00:32:55,197 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:32:55,202 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-01 00:32:56,246 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcacbff30a0> has no local changes
2024-10-01 00:32:56,246 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Generated by OMERO-python-superbuild-push#187 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/187/)'
2024-10-01 00:32:56,279 [ scc.git] DEBUG [detached HEAD 8843837] merge master -Dorg -Snone
2024-10-01 00:32:56,279 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-01 00:32:56,280 [ scc.merge] INFO Already up to date.
2024-10-01 00:32:56,280 [ scc.merge] INFO
2024-10-01 00:32:56,280 [ scc.merge] INFO Merged PRs:
2024-10-01 00:32:56,280 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-01 00:32:56,280 [ scc.merge] INFO
2024-10-01 00:32:56,280 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-01 00:32:56,280 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-01 00:32:59,248 [ scc.config] DEBUG Found github.token
2024-10-01 00:32:59,251 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-01 00:32:59,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:32:59,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:33:00,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-01 00:33:00,204 [ scc.gh] DEBUG 4612 remaining from 5000 (Reset at 01:10
2024-10-01 00:33:00,205 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-01 00:33:00,211 [ scc.git] DEBUG Check current status
2024-10-01 00:33:00,211 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-01 00:33:00,216 [ scc.git] DEBUG 8843837 merge master -Dorg -Snone
2024-10-01 00:33:00,216 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-01 00:33:00,260 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-01 00:33:00,264 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-01 00:33:00,269 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-01 00:33:00,276 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-01 00:33:00,282 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-01 00:33:00,290 [ scc.config] DEBUG Found remote.origin.url
2024-10-01 00:33:00,291 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-10-01 00:33:00,294 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-01 00:33:00,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-01 00:33:01,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-01 00:33:01,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-01 00:33:01,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-01 00:33:02,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-01 00:33:02,331 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-01 00:33:02,410 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-01 00:33:02,411 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-01 00:33:02,419 [ scc.git] DEBUG Check current status
2024-10-01 00:33:02,419 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-01 00:33:02,427 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-10-01 00:33:02,428 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-01 00:33:02,494 [ scc.config] DEBUG Found remote.origin.url
2024-10-01 00:33:02,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-10-01 00:33:03,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-01 00:33:03,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-01 00:33:04,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-01 00:33:04,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-01 00:33:04,523 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-01 00:33:04,574 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-01 00:33:04,575 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-01 00:33:04,575 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-01 00:33:04,580 [ scc.git] DEBUG Check current status
2024-10-01 00:33:04,580 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-01 00:33:04,584 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-10-01 00:33:04,584 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-01 00:33:04,633 [ scc.config] DEBUG Found remote.origin.url
2024-10-01 00:33:04,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-10-01 00:33:05,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-01 00:33:05,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-01 00:33:06,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-01 00:33:06,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-01 00:33:06,647 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-01 00:33:06,707 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-01 00:33:06,708 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-01 00:33:06,708 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-01 00:33:06,713 [ scc.git] DEBUG Check current status
2024-10-01 00:33:06,714 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-01 00:33:06,719 [ scc.git] DEBUG 4fd72efa Bump version: 5.19.5 → 5.19.6.dev0
2024-10-01 00:33:06,719 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-01 00:33:06,770 [ scc.config] DEBUG Found remote.origin.url
2024-10-01 00:33:07,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-10-01 00:33:07,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-01 00:33:08,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-01 00:33:08,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-01 00:33:08,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-01 00:33:08,808 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-01 00:33:08,876 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-01 00:33:08,877 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-01 00:33:08,877 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-01 00:33:08,882 [ scc.git] DEBUG Check current status
2024-10-01 00:33:08,882 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-01 00:33:08,888 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-01 00:33:08,889 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-01 00:33:08,954 [ scc.config] DEBUG Found remote.origin.url
2024-10-01 00:33:08,955 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-10-01 00:33:09,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-10-01 00:33:09,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-01 00:33:10,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-01 00:33:10,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-01 00:33:10,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-01 00:33:10,970 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-01 00:33:11,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-01 00:33:11,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-01 00:33:11,033 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-01 00:33:11,040 [ scc.git] DEBUG Check current status
2024-10-01 00:33:11,040 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-01 00:33:11,084 [ scc.git] DEBUG da5b7d11f Bump version: 5.27.2 → 5.27.3.dev0
2024-10-01 00:33:11,085 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-01 00:33:11,156 [ scc.config] DEBUG Found remote.origin.url
2024-10-01 00:33:11,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-10-01 00:33:11,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-01 00:33:12,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-01 00:33:12,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-01 00:33:13,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-01 00:33:13,137 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-01 00:33:13,181 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-01 00:33:13,182 [ scc.git] DEBUG Resetting...
2024-10-01 00:33:13,182 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-01 00:33:13,190 [ scc.git] DEBUG HEAD is now at 8843837 merge master -Dorg -Snone
2024-10-01 00:33:13,190 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-01 00:33:13,244 [ scc.git] DEBUG Check current status
2024-10-01 00:33:13,245 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-01 00:33:13,251 [ scc.git] DEBUG 8843837 merge master -Dorg -Snone
2024-10-01 00:33:13,251 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-01 00:33:13,298 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-01 00:33:13,301 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-01 00:33:13,304 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-01 00:33:13,308 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-01 00:33:13,311 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-01 00:33:13,312 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-01 00:33:13,313 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-01 00:33:13,313 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-01 00:33:13,313 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-01 00:33:13,313 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-01 00:33:13,313 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-10-01 00:33:13,313 [ scc.repo] DEBUG ## PRs found:
2024-10-01 00:33:13,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-01 00:33:14,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-01 00:33:14,037 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-01 00:33:14,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-01 00:33:15,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-01 00:33:15,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-01 00:33:16,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/9660559833988d271074de56e54f2462a7be74e9?per_page=1 HTTP/1.1" 200 2
2024-10-01 00:33:16,025 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-01 00:33:16,025 [ scc.repo] DEBUG ## Branches found:
2024-10-01 00:33:16,025 [ scc.git] DEBUG Get sha1 of %s
2024-10-01 00:33:16,025 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:33:16,031 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-01 00:33:16,036 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-01 00:33:16,037 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-01 00:33:16,043 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-01 00:33:16,048 [ scc.git] DEBUG Already up to date.
2024-10-01 00:33:16,049 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-01 00:33:16,354 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-01 00:33:16,354 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-01 00:33:16,362 [ scc.git] DEBUG ## Unique users: []
2024-10-01 00:33:16,362 [ scc.git] DEBUG Get sha1 of %s
2024-10-01 00:33:16,362 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:33:16,368 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-01 00:33:16,375 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:33:16,381 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-01 00:33:16,387 [ scc.git] DEBUG Already up to date.
2024-10-01 00:33:16,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:33:16,527 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-01 00:33:16,585 [ scc.git] DEBUG Get sha1 of %s
2024-10-01 00:33:16,585 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:33:16,592 [ scc.repo] DEBUG ## PRs found:
2024-10-01 00:33:17,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-10-01 00:33:17,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-10-01 00:33:17,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-10-01 00:33:18,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-01 00:33:18,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-01 00:33:19,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-01 00:33:19,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-10-01 00:33:19,762 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-01 00:33:19,762 [ scc.repo] DEBUG ## Branches found:
2024-10-01 00:33:19,762 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-01 00:33:19,762 [ scc.git] DEBUG Get sha1 of %s
2024-10-01 00:33:19,762 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:33:19,791 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-01 00:33:19,803 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-01 00:33:19,804 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-01 00:33:19,812 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-01 00:33:19,823 [ scc.git] DEBUG Already up to date.
2024-10-01 00:33:19,824 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-10-01 00:33:20,223 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-10-01 00:33:20,223 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-10-01 00:33:20,231 [ scc.git] DEBUG ## Unique users: []
2024-10-01 00:33:20,231 [ scc.git] DEBUG Get sha1 of %s
2024-10-01 00:33:20,231 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:33:20,237 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-01 00:33:20,244 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:33:20,253 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-01 00:33:20,508 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-10-01 00:33:20,508 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-10-01 00:33:20,508 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-10-01 00:33:20,508 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-10-01 00:33:20,508 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-10-01 00:33:20,508 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-10-01 00:33:20,508 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-10-01 00:33:20,508 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-10-01 00:33:20,508 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-10-01 00:33:20,510 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-01 00:33:20,515 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-10-01 00:33:20,515 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-10-01 00:33:20,515 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-10-01 00:33:20,515 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-10-01 00:33:20,515 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-10-01 00:33:20,515 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-10-01 00:33:20,515 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-10-01 00:33:20,515 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-10-01 00:33:20,515 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-10-01 00:33:20,515 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-10-01 00:33:20,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:33:20,653 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-01 00:33:20,696 [ scc.git] DEBUG Get sha1 of %s
2024-10-01 00:33:20,697 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:33:20,706 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-01 00:33:20,758 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-01 00:33:20,765 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f66db26ffa0> has no local changes
2024-10-01 00:33:20,765 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#187 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/187/)'
2024-10-01 00:33:20,830 [ scc.git] DEBUG [detached HEAD d7a1bf3] merge master -Dorg -Ssuccess-only
2024-10-01 00:33:20,831 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-01 00:33:20,832 [ scc.repo] DEBUG ## PRs found:
2024-10-01 00:33:21,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-10-01 00:33:21,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-10-01 00:33:22,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-10-01 00:33:22,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-01 00:33:23,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-01 00:33:23,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-01 00:33:24,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-10-01 00:33:24,146 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-01 00:33:24,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-10-01 00:33:25,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-10-01 00:33:25,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-10-01 00:33:25,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-10-01 00:33:25,941 [ scc.repo] DEBUG ## Branches found:
2024-10-01 00:33:25,941 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-01 00:33:25,941 [ scc.git] DEBUG Get sha1 of %s
2024-10-01 00:33:25,941 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:33:25,950 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-01 00:33:25,958 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-01 00:33:25,958 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-01 00:33:25,975 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-01 00:33:25,991 [ scc.git] DEBUG Already up to date.
2024-10-01 00:33:25,992 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-10-01 00:33:26,435 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-10-01 00:33:26,435 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-10-01 00:33:26,441 [ scc.git] DEBUG ## Unique users: []
2024-10-01 00:33:26,441 [ scc.git] DEBUG Get sha1 of %s
2024-10-01 00:33:26,441 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:33:26,447 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-01 00:33:26,453 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:33:26,460 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-01 00:33:26,485 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-10-01 00:33:26,486 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-01 00:33:26,493 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-10-01 00:33:26,493 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-10-01 00:33:26,493 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-10-01 00:33:26,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:33:26,631 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-01 00:33:26,694 [ scc.git] DEBUG Get sha1 of %s
2024-10-01 00:33:26,695 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:33:26,702 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-01 00:33:26,770 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-01 00:33:26,779 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f66db26fca0> has no local changes
2024-10-01 00:33:26,779 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#187 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/187/)'
2024-10-01 00:33:26,789 [ scc.git] DEBUG [detached HEAD 660ccf9] merge master -Dorg -Ssuccess-only
2024-10-01 00:33:26,790 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-01 00:33:26,790 [ scc.repo] DEBUG ## PRs found:
2024-10-01 00:33:27,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-10-01 00:33:27,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/431 HTTP/1.1" 200 None
2024-10-01 00:33:28,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-01 00:33:28,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-01 00:33:29,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-01 00:33:29,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-01 00:33:30,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0e500ec05bf9227b66b28a480b40e0936241d953?per_page=1 HTTP/1.1" 200 None
2024-10-01 00:33:30,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-01 00:33:31,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/status HTTP/1.1" 200 None
2024-10-01 00:33:31,224 [ scc.repo] DEBUG - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-01 00:33:31,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None
2024-10-01 00:33:32,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None
2024-10-01 00:33:32,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None
2024-10-01 00:33:32,614 [ scc.repo] DEBUG # ... Include label: include
2024-10-01 00:33:33,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fb11dc0ca13c6ba885e09d623e2ccc05f5fa9b65 HTTP/1.1" 200 None
2024-10-01 00:33:33,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fb11dc0ca13c6ba885e09d623e2ccc05f5fa9b65/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-01 00:33:34,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fb11dc0ca13c6ba885e09d623e2ccc05f5fa9b65/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-01 00:33:34,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fb11dc0ca13c6ba885e09d623e2ccc05f5fa9b65 HTTP/1.1" 200 None
2024-10-01 00:33:35,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/fb11dc0ca13c6ba885e09d623e2ccc05f5fa9b65?per_page=1 HTTP/1.1" 200 None
2024-10-01 00:33:35,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fb11dc0ca13c6ba885e09d623e2ccc05f5fa9b65 HTTP/1.1" 200 None
2024-10-01 00:33:35,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fb11dc0ca13c6ba885e09d623e2ccc05f5fa9b65/status HTTP/1.1" 200 None
2024-10-01 00:33:35,868 [ scc.repo] DEBUG - PR 427 Rdornier 'Add fileset folder creation'
2024-10-01 00:33:36,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-10-01 00:33:36,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-10-01 00:33:37,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-01 00:33:37,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-01 00:33:38,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-01 00:33:38,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-01 00:33:39,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-10-01 00:33:39,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-01 00:33:39,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-10-01 00:33:39,890 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-10-01 00:33:40,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-10-01 00:33:40,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-10-01 00:33:41,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-10-01 00:33:41,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-01 00:33:42,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-01 00:33:42,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-10-01 00:33:43,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-01 00:33:43,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-01 00:33:44,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-01 00:33:44,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-01 00:33:45,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-10-01 00:33:45,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-01 00:33:45,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-10-01 00:33:45,926 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-10-01 00:33:46,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-10-01 00:33:46,398 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-10-01 00:33:46,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-10-01 00:33:47,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-10-01 00:33:47,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-01 00:33:48,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-01 00:33:48,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-01 00:33:49,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-10-01 00:33:49,129 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-01 00:33:49,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-10-01 00:33:50,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-10-01 00:33:50,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-01 00:33:50,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-01 00:33:51,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-01 00:33:51,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-01 00:33:52,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-10-01 00:33:52,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-01 00:33:53,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-10-01 00:33:53,250 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-10-01 00:33:53,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-10-01 00:33:54,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-10-01 00:33:54,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-10-01 00:33:55,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-10-01 00:33:55,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-01 00:33:56,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-01 00:33:56,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-01 00:33:56,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-10-01 00:33:56,867 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-01 00:33:57,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-10-01 00:33:57,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-01 00:33:58,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-01 00:33:58,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-01 00:33:59,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-10-01 00:33:59,137 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-01 00:33:59,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-10-01 00:34:00,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-10-01 00:34:00,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-01 00:34:01,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-01 00:34:01,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-01 00:34:02,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-10-01 00:34:02,074 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-01 00:34:02,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-10-01 00:34:03,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-10-01 00:34:03,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-01 00:34:04,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-01 00:34:04,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-01 00:34:04,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-10-01 00:34:04,976 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-10-01 00:34:05,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-10-01 00:34:05,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-10-01 00:34:06,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-10-01 00:34:06,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-10-01 00:34:06,785 [ scc.repo] DEBUG ## Branches found:
2024-10-01 00:34:06,785 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-01 00:34:06,786 [ scc.git] DEBUG Get sha1 of %s
2024-10-01 00:34:06,786 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:34:06,791 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-01 00:34:06,796 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-01 00:34:06,796 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-01 00:34:06,802 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-01 00:34:06,808 [ scc.git] DEBUG Already up to date.
2024-10-01 00:34:06,809 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-10-01 00:34:07,888 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-01 00:34:07,888 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-10-01 00:34:07,894 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-10-01 00:34:08,344 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-01 00:34:08,345 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-10-01 00:34:08,350 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-10-01 00:34:08,986 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-01 00:34:08,986 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-10-01 00:34:08,993 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-10-01 00:34:09,323 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-01 00:34:09,323 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-10-01 00:34:09,329 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-10-01 00:34:09,684 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-01 00:34:09,684 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-10-01 00:34:09,690 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-10-01 00:34:09,988 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-01 00:34:09,988 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-10-01 00:34:09,995 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-10-01 00:34:10,302 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-01 00:34:10,302 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-10-01 00:34:10,309 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-10-01 00:34:10,897 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-01 00:34:10,897 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-10-01 00:34:10,902 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head'
2024-10-01 00:34:11,519 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-01 00:34:11,519 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD
2024-10-01 00:34:11,526 [ scc.git] DEBUG Calling 'git fetch origin pull/431/head'
2024-10-01 00:34:11,982 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-01 00:34:11,982 [ scc.git] DEBUG * branch refs/pull/431/head -> FETCH_HEAD
2024-10-01 00:34:11,989 [ scc.git] DEBUG ## Unique users: []
2024-10-01 00:34:11,989 [ scc.git] DEBUG Get sha1 of %s
2024-10-01 00:34:11,990 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:34:11,996 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-01 00:34:12,010 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:34:12,017 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-01 00:34:12,329 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-10-01 00:34:12,330 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-10-01 00:34:12,394 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-01 00:34:12,399 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-10-01 00:34:12,399 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-10-01 00:34:12,399 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-10-01 00:34:12,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:34:12,543 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-01 00:34:12,556 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:34:12,560 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-01 00:34:12,964 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-01 00:34:12,964 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-10-01 00:34:12,966 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-01 00:34:12,974 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-10-01 00:34:12,974 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-10-01 00:34:12,974 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-10-01 00:34:13,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:34:13,111 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-01 00:34:13,124 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:34:13,129 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-01 00:34:13,194 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-10-01 00:34:13,209 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-01 00:34:13,213 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-10-01 00:34:13,213 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-10-01 00:34:13,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:34:13,490 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-01 00:34:13,502 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:34:13,509 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-01 00:34:13,747 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-10-01 00:34:13,747 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-10-01 00:34:13,749 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-01 00:34:13,754 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-10-01 00:34:13,754 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-10-01 00:34:13,754 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-10-01 00:34:13,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:34:13,885 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-01 00:34:13,900 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:34:13,906 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-01 00:34:13,928 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-01 00:34:13,931 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-10-01 00:34:13,931 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-10-01 00:34:13,931 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-10-01 00:34:13,931 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-10-01 00:34:13,931 [ scc.git] DEBUG create mode 100644 connect.py
2024-10-01 00:34:14,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:34:14,281 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-01 00:34:14,317 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:34:14,336 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-01 00:34:14,416 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-10-01 00:34:14,420 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-01 00:34:14,426 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-10-01 00:34:14,427 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-10-01 00:34:14,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:34:14,670 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-10-01 00:34:14,694 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:34:14,706 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-10-01 00:34:14,945 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-10-01 00:34:14,963 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-01 00:34:14,969 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-10-01 00:34:14,970 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-10-01 00:34:15,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:34:15,114 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-01 00:34:15,133 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:34:15,143 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-01 00:34:15,294 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-01 00:34:15,295 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-01 00:34:15,303 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-10-01 00:34:15,303 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-10-01 00:34:15,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:34:15,506 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb11dc0ca13c6ba885e09d623e2ccc05f5fa9b65'
2024-10-01 00:34:15,523 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:34:15,531 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) fb11dc0ca13c6ba885e09d623e2ccc05f5fa9b65'
2024-10-01 00:34:15,794 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-01 00:34:15,798 [ scc.git] DEBUG .gitignore | 1 +
2024-10-01 00:34:15,798 [ scc.git] DEBUG src/omero/plugins/download.py | 4 +++-
2024-10-01 00:34:15,798 [ scc.git] DEBUG 2 files changed, 4 insertions(+), 1 deletion(-)
2024-10-01 00:34:15,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:34:15,939 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-01 00:34:15,958 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:34:15,965 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 431 (omero.HdfStorage.update: add size check on data.rowNumbers) 0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-01 00:34:16,041 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-01 00:34:16,045 [ scc.git] DEBUG src/omero/hdfstorageV2.py | 1 +
2024-10-01 00:34:16,046 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2024-10-01 00:34:16,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:34:16,321 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-01 00:34:16,366 [ scc.git] DEBUG Get sha1 of %s
2024-10-01 00:34:16,366 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:34:16,371 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-01 00:34:16,411 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-01 00:34:16,418 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f66da21af40> has no local changes
2024-10-01 00:34:16,419 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Generated by OMERO-python-superbuild-push#187 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/187/)'
2024-10-01 00:34:16,429 [ scc.git] DEBUG [detached HEAD 830101d8] merge master -Dorg -Ssuccess-only
2024-10-01 00:34:16,429 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-01 00:34:16,429 [ scc.git] INFO Overriding base-branch from master to develop
2024-10-01 00:34:16,429 [ scc.repo] DEBUG ## PRs found:
2024-10-01 00:34:16,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-10-01 00:34:17,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-10-01 00:34:17,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-01 00:34:18,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-01 00:34:18,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-01 00:34:19,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-01 00:34:19,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-10-01 00:34:19,763 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-01 00:34:20,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-10-01 00:34:20,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-10-01 00:34:21,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-10-01 00:34:21,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-10-01 00:34:22,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-10-01 00:34:22,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-10-01 00:34:23,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-01 00:34:23,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-01 00:34:23,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-01 00:34:24,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-10-01 00:34:24,390 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-01 00:34:24,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-10-01 00:34:25,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-10-01 00:34:25,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-10-01 00:34:26,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-10-01 00:34:26,291 [ scc.repo] DEBUG ## Branches found:
2024-10-01 00:34:26,291 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-01 00:34:26,291 [ scc.git] DEBUG Get sha1 of %s
2024-10-01 00:34:26,291 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:34:26,298 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-10-01 00:34:26,304 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-01 00:34:26,305 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-10-01 00:34:26,311 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-10-01 00:34:26,318 [ scc.git] DEBUG Already up to date.
2024-10-01 00:34:26,318 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-10-01 00:34:26,893 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-01 00:34:26,893 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-10-01 00:34:26,898 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-10-01 00:34:27,394 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-01 00:34:27,395 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-10-01 00:34:27,400 [ scc.git] DEBUG ## Unique users: []
2024-10-01 00:34:27,400 [ scc.git] DEBUG Get sha1 of %s
2024-10-01 00:34:27,400 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:34:27,407 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-01 00:34:27,414 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:34:27,418 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-01 00:34:27,613 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-10-01 00:34:27,613 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-10-01 00:34:27,613 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-10-01 00:34:27,614 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-10-01 00:34:27,620 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-01 00:34:27,625 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-01 00:34:27,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:34:27,775 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-01 00:34:27,792 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-01 00:34:27,799 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#187](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/187/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/187/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-10-01 00:34:27,804 [ scc.config] DEBUG Found github.token
2024-10-01 00:34:27,804 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-10-01 00:34:27,804 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-01 00:34:27,808 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:34:27,814 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-01 00:34:27,882 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-01 00:34:27,885 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-10-01 00:34:27,885 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-10-01 00:34:28,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:34:28,206 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-01 00:34:28,257 [ scc.git] DEBUG Get sha1 of %s
2024-10-01 00:34:28,257 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:34:28,263 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-01 00:34:28,311 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-01 00:34:28,320 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f66db26f190> has no local changes
2024-10-01 00:34:28,320 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#187 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/187/)'
2024-10-01 00:34:28,347 [ scc.git] DEBUG [detached HEAD 416d682] merge master -Dorg -Ssuccess-only
2024-10-01 00:34:28,347 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-01 00:34:28,348 [ scc.repo] DEBUG ## PRs found:
2024-10-01 00:34:28,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-10-01 00:34:29,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583 HTTP/1.1" 200 None
2024-10-01 00:34:29,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-01 00:34:30,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-01 00:34:30,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-01 00:34:31,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-01 00:34:31,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/aa50f469842b9687c74df8765d72241e6e37d32c?per_page=1 HTTP/1.1" 200 None
2024-10-01 00:34:32,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-01 00:34:32,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/status HTTP/1.1" 200 None
2024-10-01 00:34:32,536 [ scc.repo] DEBUG - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-01 00:34:32,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581 HTTP/1.1" 200 None
2024-10-01 00:34:33,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581/comments HTTP/1.1" 200 None
2024-10-01 00:34:33,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/580 HTTP/1.1" 200 None
2024-10-01 00:34:34,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-01 00:34:34,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-01 00:34:35,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-01 00:34:35,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-01 00:34:36,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc?per_page=1 HTTP/1.1" 200 None
2024-10-01 00:34:36,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-01 00:34:37,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/status HTTP/1.1" 200 None
2024-10-01 00:34:37,273 [ scc.repo] DEBUG - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-01 00:34:37,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568 HTTP/1.1" 200 None
2024-10-01 00:34:38,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568/comments HTTP/1.1" 200 None
2024-10-01 00:34:38,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-10-01 00:34:39,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-10-01 00:34:39,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-10-01 00:34:40,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-10-01 00:34:40,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-01 00:34:40,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-01 00:34:41,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-01 00:34:41,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-01 00:34:42,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-10-01 00:34:42,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-01 00:34:43,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-10-01 00:34:43,212 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-01 00:34:43,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-10-01 00:34:44,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-10-01 00:34:44,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-01 00:34:45,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-01 00:34:45,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-01 00:34:46,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-01 00:34:46,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-10-01 00:34:47,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-01 00:34:47,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-10-01 00:34:47,502 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-01 00:34:47,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-10-01 00:34:48,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-10-01 00:34:48,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-10-01 00:34:49,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-01 00:34:49,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-01 00:34:49,854 [ scc.repo] DEBUG ## Branches found:
2024-10-01 00:34:49,854 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-01 00:34:49,854 [ scc.git] DEBUG Get sha1 of %s
2024-10-01 00:34:49,855 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:34:49,861 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-01 00:34:49,868 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-01 00:34:49,868 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-01 00:34:49,877 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-01 00:34:49,889 [ scc.git] DEBUG Already up to date.
2024-10-01 00:34:49,890 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-10-01 00:34:51,039 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-01 00:34:51,039 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-10-01 00:34:51,045 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-10-01 00:34:51,371 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-01 00:34:51,371 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-10-01 00:34:51,378 [ scc.git] DEBUG Calling 'git fetch origin pull/580/head'
2024-10-01 00:34:51,855 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-01 00:34:51,856 [ scc.git] DEBUG * branch refs/pull/580/head -> FETCH_HEAD
2024-10-01 00:34:51,861 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head'
2024-10-01 00:34:52,282 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-01 00:34:52,282 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD
2024-10-01 00:34:52,289 [ scc.git] DEBUG ## Unique users: []
2024-10-01 00:34:52,289 [ scc.git] DEBUG Get sha1 of %s
2024-10-01 00:34:52,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:34:52,296 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-01 00:34:52,306 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:34:52,313 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-01 00:34:52,408 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-10-01 00:34:52,409 [ scc.git] DEBUG Auto-merging setup.py
2024-10-01 00:34:52,412 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-01 00:34:52,418 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-10-01 00:34:52,418 [ scc.git] DEBUG setup.py | 1 +
2024-10-01 00:34:52,418 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-10-01 00:34:52,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:34:52,554 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-01 00:34:52,566 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:34:52,572 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-01 00:34:52,927 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-10-01 00:34:52,928 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-10-01 00:34:52,930 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-01 00:34:52,936 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-10-01 00:34:52,936 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-10-01 00:34:52,936 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-10-01 00:34:53,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:34:53,076 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-01 00:34:53,087 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:34:53,095 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 580 (omeroweb.webgateway.obj_id_bitmask: handle empty query results) 1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-01 00:34:53,256 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-01 00:34:53,277 [ scc.git] DEBUG omeroweb/webgateway/views.py | 6 ++++++
2024-10-01 00:34:53,278 [ scc.git] DEBUG 1 file changed, 6 insertions(+)
2024-10-01 00:34:53,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:34:53,467 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-01 00:34:53,476 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:34:53,480 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Allow users to click a group name to show data from all users in that group) aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-01 00:34:53,651 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-01 00:34:53,654 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_content.html | 6 +++++-
2024-10-01 00:34:53,654 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_dropdown2.html | 2 --
2024-10-01 00:34:53,655 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 3 deletions(-)
2024-10-01 00:34:53,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:34:53,860 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-01 00:34:53,916 [ scc.git] DEBUG Get sha1 of %s
2024-10-01 00:34:53,916 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-01 00:34:53,922 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-01 00:34:53,976 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-01 00:34:53,988 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f66d916eb20> has no local changes
2024-10-01 00:34:53,989 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
Generated by OMERO-python-superbuild-push#187 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/187/)'
2024-10-01 00:34:54,059 [ scc.git] DEBUG [detached HEAD 4c92349b4] merge master -Dorg -Ssuccess-only
2024-10-01 00:34:54,059 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-01 00:34:54,059 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-01 00:34:54,121 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-10-01 00:34:54,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:34:54,273 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-10-01 00:34:54,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:34:54,657 [ scc.config] DEBUG Found submodule.omero-py.url
2024-10-01 00:34:55,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:34:55,057 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-10-01 00:34:55,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:34:55,434 [ scc.config] DEBUG Found submodule.omero-web.url
2024-10-01 00:34:55,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-01 00:34:55,811 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-01 00:34:55,849 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f66db5130a0> has local changes
2024-10-01 00:34:55,849 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
Generated by OMERO-python-superbuild-push#187 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/187/)'
2024-10-01 00:34:55,860 [ scc.git] DEBUG [detached HEAD eda8a2d] merge master -Dorg -Ssuccess-only
2024-10-01 00:34:55,860 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-10-01 00:34:55,861 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-01 00:34:55,861 [ scc.merge] INFO Already up to date.
2024-10-01 00:34:55,861 [ scc.merge] INFO
2024-10-01 00:34:55,861 [ scc.merge] INFO Merged PRs:
2024-10-01 00:34:55,861 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-01 00:34:55,861 [ scc.merge] INFO
2024-10-01 00:34:55,861 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-10-01 00:34:55,861 [ scc.merge] INFO Already up to date.
2024-10-01 00:34:55,861 [ scc.merge] INFO
2024-10-01 00:34:55,862 [ scc.merge] INFO Merged PRs:
2024-10-01 00:34:55,862 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-01 00:34:55,862 [ scc.merge] INFO
2024-10-01 00:34:55,862 [ scc.merge] INFO Repository: ome/omero-marshal
2024-10-01 00:34:55,862 [ scc.merge] INFO Excluded PRs:
2024-10-01 00:34:55,862 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-10-01 00:34:55,862 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-10-01 00:34:55,862 [ scc.merge] INFO Already up to date.
2024-10-01 00:34:55,862 [ scc.merge] INFO
2024-10-01 00:34:55,862 [ scc.merge] INFO Merged PRs:
2024-10-01 00:34:55,862 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-01 00:34:55,863 [ scc.merge] INFO
2024-10-01 00:34:55,863 [ scc.merge] INFO Repository: ome/omero-py
2024-10-01 00:34:55,863 [ scc.merge] INFO Excluded PRs:
2024-10-01 00:34:55,863 [ scc.merge] INFO - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
2024-10-01 00:34:55,863 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-10-01 00:34:55,863 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-10-01 00:34:55,863 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-10-01 00:34:55,863 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-10-01 00:34:55,863 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-10-01 00:34:55,863 [ scc.merge] INFO Already up to date.
2024-10-01 00:34:55,863 [ scc.merge] INFO
2024-10-01 00:34:55,863 [ scc.merge] INFO Merged PRs:
2024-10-01 00:34:55,864 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-10-01 00:34:55,864 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-01 00:34:55,864 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-01 00:34:55,864 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-01 00:34:55,864 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-10-01 00:34:55,864 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-01 00:34:55,864 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-10-01 00:34:55,864 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-10-01 00:34:55,864 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation'
2024-10-01 00:34:55,864 [ scc.merge] INFO - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-01 00:34:55,864 [ scc.merge] INFO
2024-10-01 00:34:55,864 [ scc.merge] INFO Repository: ome/omero-scripts
2024-10-01 00:34:55,865 [ scc.merge] INFO Excluded PRs:
2024-10-01 00:34:55,865 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-10-01 00:34:55,865 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-10-01 00:34:55,865 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-10-01 00:34:55,865 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-10-01 00:34:55,865 [ scc.merge] INFO Already up to date.
2024-10-01 00:34:55,865 [ scc.merge] INFO
2024-10-01 00:34:55,865 [ scc.merge] INFO Merged PRs:
2024-10-01 00:34:55,865 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-01 00:34:55,865 [ scc.merge] INFO
2024-10-01 00:34:55,865 [ scc.merge] INFO Conflicting PRs (not included):
2024-10-01 00:34:55,865 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-01 00:34:55,865 [ scc.merge] INFO
2024-10-01 00:34:55,865 [ scc.merge] INFO Repository: ome/omero-web
2024-10-01 00:34:55,865 [ scc.merge] INFO Excluded PRs:
2024-10-01 00:34:55,865 [ scc.merge] INFO - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
2024-10-01 00:34:55,865 [ scc.merge] INFO - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
2024-10-01 00:34:55,865 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-10-01 00:34:55,865 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-10-01 00:34:55,865 [ scc.merge] INFO Already up to date.
2024-10-01 00:34:55,865 [ scc.merge] INFO
2024-10-01 00:34:55,865 [ scc.merge] INFO Merged PRs:
2024-10-01 00:34:55,865 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-01 00:34:55,865 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-01 00:34:55,865 [ scc.merge] INFO - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-01 00:34:55,865 [ scc.merge] INFO - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-01 00:34:55,865 [ scc.merge] INFO
2024-10-01 00:34:55,866 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-01 00:34:55,866 [ scc.git] DEBUG Calling 'git remote'
2024-10-01 00:34:55,871 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-01 00:34:55,872 [ scc.git] DEBUG Calling 'git remote'
2024-10-01 00:34:55,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-01 00:34:55,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-01 00:34:55,878 [ scc.git] DEBUG Calling 'git remote'
2024-10-01 00:34:55,883 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-01 00:34:55,883 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-01 00:34:55,884 [ scc.git] DEBUG Calling 'git remote'
2024-10-01 00:34:55,889 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-01 00:34:55,890 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-01 00:34:55,890 [ scc.git] DEBUG Calling 'git remote'
2024-10-01 00:34:55,894 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-01 00:34:55,894 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-01 00:34:55,894 [ scc.git] DEBUG Calling 'git remote'
2024-10-01 00:34:55,900 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 4fd72efa
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from da5b7d11f
nothing to commit, working tree clean
HEAD detached from e849d72
nothing to commit, working tree clean
2024-10-01 00:35:24,936 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
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