Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-10-03 00:35:57,658 [ scc.config] DEBUG Found github.token
2024-10-03 00:35:57,661 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-03 00:35:57,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:35:58,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:35:58,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-03 00:35:58,674 [ scc.gh] DEBUG 4622 remaining from 5000 (Reset at 01:10
2024-10-03 00:35:58,675 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-03 00:35:58,680 [ scc.git] DEBUG Check current status
2024-10-03 00:35:58,680 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-03 00:35:58,684 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-03 00:35:58,684 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-03 00:35:58,724 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-03 00:35:58,727 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-03 00:35:58,731 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-03 00:35:58,735 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-03 00:35:58,738 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-03 00:35:58,743 [ scc.config] DEBUG Found remote.origin.url
2024-10-03 00:35:59,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-03 00:35:59,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-03 00:36:00,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-03 00:36:00,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-03 00:36:00,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-03 00:36:00,847 [ scc.git] DEBUG Resetting...
2024-10-03 00:36:00,847 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-03 00:36:00,853 [ scc.git] DEBUG HEAD is now at e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-03 00:36:00,853 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-03 00:36:00,907 [ scc.git] DEBUG Check current status
2024-10-03 00:36:00,908 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-03 00:36:00,912 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-03 00:36:00,912 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-03 00:36:00,951 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-03 00:36:00,954 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-03 00:36:00,957 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-03 00:36:00,961 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-03 00:36:00,965 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-03 00:36:00,966 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-03 00:36:00,966 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-03 00:36:00,966 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-03 00:36:00,966 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-03 00:36:00,966 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-03 00:36:00,966 [ scc.repo] DEBUG ## PRs found:
2024-10-03 00:36:01,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-03 00:36:01,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-03 00:36:01,799 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-03 00:36:01,799 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-03 00:36:01,799 [ scc.repo] DEBUG ## Branches found:
2024-10-03 00:36:01,799 [ scc.git] DEBUG Get sha1 of %s
2024-10-03 00:36:01,799 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:36:01,803 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-03 00:36:01,807 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-03 00:36:01,807 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-03 00:36:01,811 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-03 00:36:01,814 [ scc.git] DEBUG Already up to date.
2024-10-03 00:36:01,815 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-03 00:36:02,125 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-03 00:36:02,125 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-03 00:36:02,131 [ scc.git] DEBUG ## Unique users: []
2024-10-03 00:36:02,131 [ scc.git] DEBUG Get sha1 of %s
2024-10-03 00:36:02,131 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:36:02,137 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-03 00:36:02,143 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:36:02,147 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-03 00:36:02,157 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-03 00:36:02,159 [ scc.git] DEBUG omero-py | 2 +-
2024-10-03 00:36:02,159 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-10-03 00:36:02,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:36:02,301 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-03 00:36:02,433 [ scc.git] DEBUG Submodule path 'omero-py': checked out '4fd72efaa8cdbec9da98e1d28678af16878a86ba'
2024-10-03 00:36:02,434 [ scc.git] DEBUG Get sha1 of %s
2024-10-03 00:36:02,434 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:36:02,439 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-03 00:36:02,661 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7eff4032bb80> has no local changes
2024-10-03 00:36:02,661 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Generated by OMERO-python-superbuild-push#189 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/189/)'
2024-10-03 00:36:02,689 [ scc.git] DEBUG [detached HEAD dde532e] merge master -Dorg -Snone
2024-10-03 00:36:02,689 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-03 00:36:02,689 [ scc.merge] INFO Already up to date.
2024-10-03 00:36:02,689 [ scc.merge] INFO
2024-10-03 00:36:02,689 [ scc.merge] INFO Merged PRs:
2024-10-03 00:36:02,689 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-03 00:36:02,689 [ scc.merge] INFO
2024-10-03 00:36:02,690 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-03 00:36:02,690 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-03 00:36:05,127 [ scc.config] DEBUG Found github.token
2024-10-03 00:36:05,129 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-03 00:36:05,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:36:05,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:36:06,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-03 00:36:06,076 [ scc.gh] DEBUG 4612 remaining from 5000 (Reset at 01:10
2024-10-03 00:36:06,077 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-03 00:36:06,081 [ scc.git] DEBUG Check current status
2024-10-03 00:36:06,081 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-03 00:36:06,085 [ scc.git] DEBUG dde532e merge master -Dorg -Snone
2024-10-03 00:36:06,085 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-03 00:36:06,128 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-03 00:36:06,131 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-03 00:36:06,135 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-03 00:36:06,139 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-03 00:36:06,142 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-03 00:36:06,147 [ scc.config] DEBUG Found remote.origin.url
2024-10-03 00:36:06,147 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-10-03 00:36:06,149 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-03 00:36:06,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-03 00:36:06,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-03 00:36:07,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-03 00:36:07,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-03 00:36:08,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-03 00:36:08,162 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-03 00:36:08,208 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-03 00:36:08,208 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-03 00:36:08,213 [ scc.git] DEBUG Check current status
2024-10-03 00:36:08,214 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-03 00:36:08,218 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-10-03 00:36:08,218 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-03 00:36:08,262 [ scc.config] DEBUG Found remote.origin.url
2024-10-03 00:36:08,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-10-03 00:36:09,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-03 00:36:09,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-03 00:36:10,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-03 00:36:10,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-03 00:36:10,488 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-03 00:36:10,537 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-03 00:36:10,538 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-03 00:36:10,538 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-03 00:36:10,542 [ scc.git] DEBUG Check current status
2024-10-03 00:36:10,542 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-03 00:36:10,546 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-10-03 00:36:10,546 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-03 00:36:10,593 [ scc.config] DEBUG Found remote.origin.url
2024-10-03 00:36:10,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-10-03 00:36:11,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-03 00:36:11,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-03 00:36:12,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-03 00:36:12,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-03 00:36:12,635 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-03 00:36:12,681 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-03 00:36:12,682 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-03 00:36:12,682 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-03 00:36:12,688 [ scc.git] DEBUG Check current status
2024-10-03 00:36:12,688 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-03 00:36:12,694 [ scc.git] DEBUG 4fd72efa Bump version: 5.19.5 → 5.19.6.dev0
2024-10-03 00:36:12,694 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-03 00:36:12,740 [ scc.config] DEBUG Found remote.origin.url
2024-10-03 00:36:13,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-10-03 00:36:13,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-03 00:36:13,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-03 00:36:14,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-03 00:36:14,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-03 00:36:14,786 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-03 00:36:14,831 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-03 00:36:14,832 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-03 00:36:14,832 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-03 00:36:14,836 [ scc.git] DEBUG Check current status
2024-10-03 00:36:14,836 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-03 00:36:14,841 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-03 00:36:14,841 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-03 00:36:14,890 [ scc.config] DEBUG Found remote.origin.url
2024-10-03 00:36:14,891 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-10-03 00:36:15,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-10-03 00:36:15,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-03 00:36:16,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-03 00:36:16,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-03 00:36:17,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-03 00:36:17,056 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-03 00:36:17,101 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-03 00:36:17,102 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-03 00:36:17,102 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-03 00:36:17,107 [ scc.git] DEBUG Check current status
2024-10-03 00:36:17,108 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-03 00:36:17,112 [ scc.git] DEBUG da5b7d11f Bump version: 5.27.2 → 5.27.3.dev0
2024-10-03 00:36:17,113 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-03 00:36:17,161 [ scc.config] DEBUG Found remote.origin.url
2024-10-03 00:36:17,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-10-03 00:36:17,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-03 00:36:18,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-03 00:36:18,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-03 00:36:19,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-03 00:36:19,207 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-03 00:36:19,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-03 00:36:19,251 [ scc.git] DEBUG Resetting...
2024-10-03 00:36:19,251 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-03 00:36:19,258 [ scc.git] DEBUG HEAD is now at dde532e merge master -Dorg -Snone
2024-10-03 00:36:19,258 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-03 00:36:19,316 [ scc.git] DEBUG Check current status
2024-10-03 00:36:19,316 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-03 00:36:19,322 [ scc.git] DEBUG dde532e merge master -Dorg -Snone
2024-10-03 00:36:19,322 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-03 00:36:19,369 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-03 00:36:19,372 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-03 00:36:19,377 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-03 00:36:19,381 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-03 00:36:19,386 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-03 00:36:19,387 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-03 00:36:19,387 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-03 00:36:19,387 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-03 00:36:19,387 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-03 00:36:19,387 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-03 00:36:19,387 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-10-03 00:36:19,387 [ scc.repo] DEBUG ## PRs found:
2024-10-03 00:36:19,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-03 00:36:20,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-03 00:36:20,153 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-03 00:36:20,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-03 00:36:21,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-03 00:36:21,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-03 00:36:22,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/9660559833988d271074de56e54f2462a7be74e9?per_page=1 HTTP/1.1" 200 2
2024-10-03 00:36:22,048 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-03 00:36:22,048 [ scc.repo] DEBUG ## Branches found:
2024-10-03 00:36:22,048 [ scc.git] DEBUG Get sha1 of %s
2024-10-03 00:36:22,048 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:36:22,053 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-03 00:36:22,057 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-03 00:36:22,058 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-03 00:36:22,063 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-03 00:36:22,068 [ scc.git] DEBUG Already up to date.
2024-10-03 00:36:22,068 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-03 00:36:22,376 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-03 00:36:22,377 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-03 00:36:22,383 [ scc.git] DEBUG ## Unique users: []
2024-10-03 00:36:22,383 [ scc.git] DEBUG Get sha1 of %s
2024-10-03 00:36:22,383 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:36:22,388 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-03 00:36:22,399 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:36:22,406 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-03 00:36:22,412 [ scc.git] DEBUG Already up to date.
2024-10-03 00:36:22,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:36:22,551 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-03 00:36:22,593 [ scc.git] DEBUG Get sha1 of %s
2024-10-03 00:36:22,593 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:36:22,599 [ scc.repo] DEBUG ## PRs found:
2024-10-03 00:36:23,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-10-03 00:36:23,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-10-03 00:36:23,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-10-03 00:36:24,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-03 00:36:24,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-03 00:36:25,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-03 00:36:25,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-10-03 00:36:25,847 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-03 00:36:25,847 [ scc.repo] DEBUG ## Branches found:
2024-10-03 00:36:25,847 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-03 00:36:25,847 [ scc.git] DEBUG Get sha1 of %s
2024-10-03 00:36:25,847 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:36:25,854 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-03 00:36:25,859 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-03 00:36:25,859 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-03 00:36:25,865 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-03 00:36:25,872 [ scc.git] DEBUG Already up to date.
2024-10-03 00:36:25,872 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-10-03 00:36:26,299 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-10-03 00:36:26,299 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-10-03 00:36:26,304 [ scc.git] DEBUG ## Unique users: []
2024-10-03 00:36:26,304 [ scc.git] DEBUG Get sha1 of %s
2024-10-03 00:36:26,304 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:36:26,310 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-03 00:36:26,315 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:36:26,321 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-03 00:36:26,438 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-10-03 00:36:26,438 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-10-03 00:36:26,438 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-10-03 00:36:26,438 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-10-03 00:36:26,438 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-10-03 00:36:26,438 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-10-03 00:36:26,438 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-10-03 00:36:26,438 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-10-03 00:36:26,438 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-10-03 00:36:26,439 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-03 00:36:26,443 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-10-03 00:36:26,443 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-10-03 00:36:26,443 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-10-03 00:36:26,443 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-10-03 00:36:26,443 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-10-03 00:36:26,443 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-10-03 00:36:26,443 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-10-03 00:36:26,443 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-10-03 00:36:26,443 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-10-03 00:36:26,444 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-10-03 00:36:26,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:36:26,580 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-03 00:36:26,628 [ scc.git] DEBUG Get sha1 of %s
2024-10-03 00:36:26,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:36:26,633 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-03 00:36:26,676 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-03 00:36:26,683 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe357ed4f70> has no local changes
2024-10-03 00:36:26,683 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#189 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/189/)'
2024-10-03 00:36:26,692 [ scc.git] DEBUG [detached HEAD 81b1c58] merge master -Dorg -Ssuccess-only
2024-10-03 00:36:26,692 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-03 00:36:26,692 [ scc.repo] DEBUG ## PRs found:
2024-10-03 00:36:27,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-10-03 00:36:27,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-10-03 00:36:28,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-10-03 00:36:28,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-03 00:36:28,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-03 00:36:29,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-03 00:36:29,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-10-03 00:36:29,807 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-03 00:36:30,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-10-03 00:36:30,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-10-03 00:36:31,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-10-03 00:36:31,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-10-03 00:36:31,634 [ scc.repo] DEBUG ## Branches found:
2024-10-03 00:36:31,634 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-03 00:36:31,634 [ scc.git] DEBUG Get sha1 of %s
2024-10-03 00:36:31,634 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:36:31,641 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-03 00:36:31,646 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-03 00:36:31,646 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-03 00:36:31,652 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-03 00:36:31,658 [ scc.git] DEBUG Already up to date.
2024-10-03 00:36:31,658 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-10-03 00:36:32,117 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-10-03 00:36:32,117 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-10-03 00:36:32,123 [ scc.git] DEBUG ## Unique users: []
2024-10-03 00:36:32,124 [ scc.git] DEBUG Get sha1 of %s
2024-10-03 00:36:32,124 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:36:32,129 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-03 00:36:32,135 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:36:32,142 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-03 00:36:32,155 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-10-03 00:36:32,155 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-03 00:36:32,159 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-10-03 00:36:32,159 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-10-03 00:36:32,159 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-10-03 00:36:32,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:36:32,302 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-03 00:36:32,351 [ scc.git] DEBUG Get sha1 of %s
2024-10-03 00:36:32,351 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:36:32,357 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-03 00:36:32,405 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-03 00:36:32,412 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe35a1d8ee0> has no local changes
2024-10-03 00:36:32,412 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#189 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/189/)'
2024-10-03 00:36:32,421 [ scc.git] DEBUG [detached HEAD 14869d4] merge master -Dorg -Ssuccess-only
2024-10-03 00:36:32,421 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-03 00:36:32,422 [ scc.repo] DEBUG ## PRs found:
2024-10-03 00:36:33,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-10-03 00:36:33,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/431 HTTP/1.1" 200 None
2024-10-03 00:36:34,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-03 00:36:34,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-03 00:36:35,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-03 00:36:35,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-03 00:36:36,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0e500ec05bf9227b66b28a480b40e0936241d953?per_page=1 HTTP/1.1" 200 None
2024-10-03 00:36:36,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-03 00:36:37,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/status HTTP/1.1" 200 None
2024-10-03 00:36:37,070 [ scc.repo] DEBUG - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-03 00:36:37,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None
2024-10-03 00:36:38,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None
2024-10-03 00:36:38,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None
2024-10-03 00:36:38,516 [ scc.repo] DEBUG # ... Include label: include
2024-10-03 00:36:39,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/dd7654c540d523ece50f8b63c62503cd941861b4 HTTP/1.1" 200 None
2024-10-03 00:36:39,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/dd7654c540d523ece50f8b63c62503cd941861b4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-03 00:36:39,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/dd7654c540d523ece50f8b63c62503cd941861b4/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-03 00:36:40,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/dd7654c540d523ece50f8b63c62503cd941861b4 HTTP/1.1" 200 None
2024-10-03 00:36:40,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/dd7654c540d523ece50f8b63c62503cd941861b4?per_page=1 HTTP/1.1" 200 None
2024-10-03 00:36:41,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/dd7654c540d523ece50f8b63c62503cd941861b4 HTTP/1.1" 200 None
2024-10-03 00:36:41,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/dd7654c540d523ece50f8b63c62503cd941861b4/status HTTP/1.1" 200 None
2024-10-03 00:36:41,629 [ scc.repo] DEBUG - PR 427 Rdornier 'Add fileset folder creation'
2024-10-03 00:36:42,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-10-03 00:36:42,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-10-03 00:36:43,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-03 00:36:43,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-03 00:36:43,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-03 00:36:44,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-03 00:36:44,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-10-03 00:36:45,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-03 00:36:45,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-10-03 00:36:45,711 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-10-03 00:36:46,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-10-03 00:36:46,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-10-03 00:36:47,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-10-03 00:36:47,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-03 00:36:48,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-03 00:36:48,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-10-03 00:36:49,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-03 00:36:49,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-03 00:36:49,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-03 00:36:50,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-03 00:36:50,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-10-03 00:36:51,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-03 00:36:51,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-10-03 00:36:51,822 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-10-03 00:36:52,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-10-03 00:36:52,286 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-10-03 00:36:52,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-10-03 00:36:53,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-10-03 00:36:53,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-03 00:36:54,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-03 00:36:54,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-03 00:36:54,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-10-03 00:36:54,979 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-03 00:36:55,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-10-03 00:36:55,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-10-03 00:36:56,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-03 00:36:56,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-03 00:36:57,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-03 00:36:57,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-03 00:36:58,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-10-03 00:36:58,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-03 00:36:59,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-10-03 00:36:59,084 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-10-03 00:36:59,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-10-03 00:37:00,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-10-03 00:37:00,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-10-03 00:37:00,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-10-03 00:37:01,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-03 00:37:01,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-03 00:37:02,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-03 00:37:02,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-10-03 00:37:02,815 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-03 00:37:03,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-10-03 00:37:03,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-03 00:37:04,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-03 00:37:04,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-03 00:37:05,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-10-03 00:37:05,180 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-03 00:37:05,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-10-03 00:37:06,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-10-03 00:37:06,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-03 00:37:07,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-03 00:37:07,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-03 00:37:08,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-10-03 00:37:08,129 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-03 00:37:08,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-10-03 00:37:09,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-10-03 00:37:09,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-03 00:37:10,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-03 00:37:10,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-03 00:37:10,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-10-03 00:37:10,954 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-10-03 00:37:11,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-10-03 00:37:11,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-10-03 00:37:12,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-10-03 00:37:12,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-10-03 00:37:12,780 [ scc.repo] DEBUG ## Branches found:
2024-10-03 00:37:12,780 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-03 00:37:12,780 [ scc.git] DEBUG Get sha1 of %s
2024-10-03 00:37:12,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:37:12,786 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-03 00:37:12,790 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-03 00:37:12,790 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-03 00:37:12,795 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-03 00:37:12,801 [ scc.git] DEBUG Already up to date.
2024-10-03 00:37:12,801 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-10-03 00:37:14,197 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-03 00:37:14,197 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-10-03 00:37:14,204 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-10-03 00:37:14,579 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-03 00:37:14,579 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-10-03 00:37:14,585 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-10-03 00:37:14,984 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-03 00:37:14,984 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-10-03 00:37:14,990 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-10-03 00:37:15,293 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-03 00:37:15,294 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-10-03 00:37:15,299 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-10-03 00:37:15,697 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-03 00:37:15,697 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-10-03 00:37:15,703 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-10-03 00:37:15,993 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-03 00:37:15,993 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-10-03 00:37:15,999 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-10-03 00:37:16,293 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-03 00:37:16,293 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-10-03 00:37:16,298 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-10-03 00:37:16,764 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-03 00:37:16,764 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-10-03 00:37:16,769 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head'
2024-10-03 00:37:17,427 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-03 00:37:17,428 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD
2024-10-03 00:37:17,431 [ scc.git] DEBUG Calling 'git fetch origin pull/431/head'
2024-10-03 00:37:17,789 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-03 00:37:17,790 [ scc.git] DEBUG * branch refs/pull/431/head -> FETCH_HEAD
2024-10-03 00:37:17,795 [ scc.git] DEBUG ## Unique users: []
2024-10-03 00:37:17,795 [ scc.git] DEBUG Get sha1 of %s
2024-10-03 00:37:17,795 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:37:17,802 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-03 00:37:17,814 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:37:17,818 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-03 00:37:17,985 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-10-03 00:37:17,985 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-10-03 00:37:17,985 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-03 00:37:17,990 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-10-03 00:37:17,990 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-10-03 00:37:17,990 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-10-03 00:37:18,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:37:18,122 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-03 00:37:18,134 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:37:18,139 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-03 00:37:18,479 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-03 00:37:18,479 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-10-03 00:37:18,480 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-03 00:37:18,488 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-10-03 00:37:18,488 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-10-03 00:37:18,489 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-10-03 00:37:18,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:37:18,630 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-03 00:37:18,643 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:37:18,648 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-03 00:37:18,697 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-10-03 00:37:18,698 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-03 00:37:18,701 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-10-03 00:37:18,701 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-10-03 00:37:19,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:37:19,022 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-03 00:37:19,035 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:37:19,040 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-03 00:37:19,294 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-10-03 00:37:19,294 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-10-03 00:37:19,295 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-03 00:37:19,299 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-10-03 00:37:19,299 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-10-03 00:37:19,299 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-10-03 00:37:19,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:37:19,433 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-03 00:37:19,445 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:37:19,451 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-03 00:37:19,518 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-03 00:37:19,521 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-10-03 00:37:19,521 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-10-03 00:37:19,521 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-10-03 00:37:19,521 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-10-03 00:37:19,521 [ scc.git] DEBUG create mode 100644 connect.py
2024-10-03 00:37:19,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:37:19,825 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-03 00:37:19,838 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:37:19,843 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-03 00:37:19,874 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-10-03 00:37:19,875 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-03 00:37:19,879 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-10-03 00:37:19,879 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-10-03 00:37:20,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:37:20,222 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-10-03 00:37:20,235 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:37:20,241 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-10-03 00:37:20,343 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-10-03 00:37:20,345 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-03 00:37:20,349 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-10-03 00:37:20,349 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-10-03 00:37:20,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:37:20,636 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-03 00:37:20,650 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:37:20,655 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-03 00:37:20,890 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-03 00:37:20,891 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-03 00:37:20,899 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-10-03 00:37:20,899 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-10-03 00:37:21,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:37:21,042 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dd7654c540d523ece50f8b63c62503cd941861b4'
2024-10-03 00:37:21,056 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:37:21,063 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) dd7654c540d523ece50f8b63c62503cd941861b4'
2024-10-03 00:37:21,088 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-03 00:37:21,091 [ scc.git] DEBUG .gitignore | 1 +
2024-10-03 00:37:21,092 [ scc.git] DEBUG src/omero/plugins/download.py | 17 ++++++++++++-----
2024-10-03 00:37:21,092 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 5 deletions(-)
2024-10-03 00:37:21,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:37:21,429 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-03 00:37:21,442 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:37:21,447 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 431 (omero.HdfStorage.update: add size check on data.rowNumbers) 0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-03 00:37:21,468 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-03 00:37:21,471 [ scc.git] DEBUG src/omero/hdfstorageV2.py | 1 +
2024-10-03 00:37:21,471 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2024-10-03 00:37:21,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:37:21,811 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-03 00:37:21,854 [ scc.git] DEBUG Get sha1 of %s
2024-10-03 00:37:21,854 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:37:21,860 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-03 00:37:21,899 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-03 00:37:21,907 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe356e7ef40> has no local changes
2024-10-03 00:37:21,907 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Generated by OMERO-python-superbuild-push#189 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/189/)'
2024-10-03 00:37:21,917 [ scc.git] DEBUG [detached HEAD 79ccc95d] merge master -Dorg -Ssuccess-only
2024-10-03 00:37:21,917 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-03 00:37:21,917 [ scc.git] INFO Overriding base-branch from master to develop
2024-10-03 00:37:21,918 [ scc.repo] DEBUG ## PRs found:
2024-10-03 00:37:22,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-10-03 00:37:22,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-10-03 00:37:23,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-03 00:37:23,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-03 00:37:24,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-03 00:37:24,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-03 00:37:25,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-10-03 00:37:25,263 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-03 00:37:25,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-10-03 00:37:26,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-10-03 00:37:26,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-10-03 00:37:27,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-10-03 00:37:27,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-10-03 00:37:28,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-10-03 00:37:28,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-03 00:37:29,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-03 00:37:29,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-03 00:37:29,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-10-03 00:37:29,954 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-03 00:37:30,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-10-03 00:37:31,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-10-03 00:37:31,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-10-03 00:37:32,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-10-03 00:37:32,032 [ scc.repo] DEBUG ## Branches found:
2024-10-03 00:37:32,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-03 00:37:32,032 [ scc.git] DEBUG Get sha1 of %s
2024-10-03 00:37:32,032 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:37:32,038 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-10-03 00:37:32,043 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-03 00:37:32,043 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-10-03 00:37:32,049 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-10-03 00:37:32,055 [ scc.git] DEBUG Already up to date.
2024-10-03 00:37:32,055 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-10-03 00:37:32,437 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-03 00:37:32,437 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-10-03 00:37:32,444 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-10-03 00:37:32,866 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-03 00:37:32,866 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-10-03 00:37:32,871 [ scc.git] DEBUG ## Unique users: []
2024-10-03 00:37:32,871 [ scc.git] DEBUG Get sha1 of %s
2024-10-03 00:37:32,872 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:37:32,877 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-03 00:37:32,884 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:37:32,889 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-03 00:37:32,906 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-10-03 00:37:32,906 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-10-03 00:37:32,906 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-10-03 00:37:32,907 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-10-03 00:37:32,912 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-03 00:37:32,919 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-03 00:37:33,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:37:33,057 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-03 00:37:33,065 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-03 00:37:33,072 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#189](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/189/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/189/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-10-03 00:37:33,080 [ scc.config] DEBUG Found github.token
2024-10-03 00:37:33,080 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-10-03 00:37:33,080 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-03 00:37:33,088 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:37:33,094 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-03 00:37:33,104 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-03 00:37:33,107 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-10-03 00:37:33,107 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-10-03 00:37:33,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:37:33,442 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-03 00:37:33,488 [ scc.git] DEBUG Get sha1 of %s
2024-10-03 00:37:33,488 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:37:33,493 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-03 00:37:33,541 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-03 00:37:33,549 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe357ed4550> has no local changes
2024-10-03 00:37:33,549 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#189 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/189/)'
2024-10-03 00:37:33,559 [ scc.git] DEBUG [detached HEAD 43b71d2] merge master -Dorg -Ssuccess-only
2024-10-03 00:37:33,560 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-03 00:37:33,560 [ scc.repo] DEBUG ## PRs found:
2024-10-03 00:37:34,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-10-03 00:37:34,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583 HTTP/1.1" 200 None
2024-10-03 00:37:35,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-03 00:37:35,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-03 00:37:35,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-03 00:37:36,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-03 00:37:36,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/aa50f469842b9687c74df8765d72241e6e37d32c?per_page=1 HTTP/1.1" 200 None
2024-10-03 00:37:37,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-03 00:37:37,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/status HTTP/1.1" 200 None
2024-10-03 00:37:37,760 [ scc.repo] DEBUG - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-03 00:37:38,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581 HTTP/1.1" 200 None
2024-10-03 00:37:38,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581/comments HTTP/1.1" 200 None
2024-10-03 00:37:39,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/580 HTTP/1.1" 200 None
2024-10-03 00:37:39,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-03 00:37:40,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-03 00:37:40,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-03 00:37:41,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-03 00:37:41,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc?per_page=1 HTTP/1.1" 200 None
2024-10-03 00:37:42,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-03 00:37:42,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/status HTTP/1.1" 200 None
2024-10-03 00:37:42,532 [ scc.repo] DEBUG - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-03 00:37:42,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568 HTTP/1.1" 200 None
2024-10-03 00:37:43,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568/comments HTTP/1.1" 200 None
2024-10-03 00:37:43,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-10-03 00:37:44,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-10-03 00:37:44,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-10-03 00:37:45,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-10-03 00:37:45,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-03 00:37:46,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-03 00:37:46,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-03 00:37:47,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-03 00:37:47,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-10-03 00:37:47,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-03 00:37:48,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-10-03 00:37:48,433 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-03 00:37:48,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-10-03 00:37:49,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-10-03 00:37:49,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-03 00:37:50,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-03 00:37:50,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-03 00:37:51,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-03 00:37:51,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-10-03 00:37:52,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-03 00:37:52,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-10-03 00:37:52,628 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-03 00:37:53,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-10-03 00:37:53,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-10-03 00:37:54,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-10-03 00:37:54,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-03 00:37:55,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-03 00:37:55,040 [ scc.repo] DEBUG ## Branches found:
2024-10-03 00:37:55,040 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-03 00:37:55,040 [ scc.git] DEBUG Get sha1 of %s
2024-10-03 00:37:55,040 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:37:55,045 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-03 00:37:55,050 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-03 00:37:55,050 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-03 00:37:55,055 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-03 00:37:55,060 [ scc.git] DEBUG Already up to date.
2024-10-03 00:37:55,060 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-10-03 00:37:56,335 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-03 00:37:56,336 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-10-03 00:37:56,341 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-10-03 00:37:56,643 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-03 00:37:56,644 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-10-03 00:37:56,648 [ scc.git] DEBUG Calling 'git fetch origin pull/580/head'
2024-10-03 00:37:57,073 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-03 00:37:57,074 [ scc.git] DEBUG * branch refs/pull/580/head -> FETCH_HEAD
2024-10-03 00:37:57,079 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head'
2024-10-03 00:37:57,503 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-03 00:37:57,503 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD
2024-10-03 00:37:57,508 [ scc.git] DEBUG ## Unique users: []
2024-10-03 00:37:57,508 [ scc.git] DEBUG Get sha1 of %s
2024-10-03 00:37:57,508 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:37:57,514 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-03 00:37:57,523 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:37:57,528 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-03 00:37:57,730 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-10-03 00:37:57,730 [ scc.git] DEBUG Auto-merging setup.py
2024-10-03 00:37:57,732 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-03 00:37:57,736 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-10-03 00:37:57,736 [ scc.git] DEBUG setup.py | 1 +
2024-10-03 00:37:57,736 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-10-03 00:37:57,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:37:57,870 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-03 00:37:57,878 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:37:57,883 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-03 00:37:58,071 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-10-03 00:37:58,072 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-10-03 00:37:58,073 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-03 00:37:58,077 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-10-03 00:37:58,077 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-10-03 00:37:58,077 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-10-03 00:37:58,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:37:58,288 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-03 00:37:58,296 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:37:58,302 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 580 (omeroweb.webgateway.obj_id_bitmask: handle empty query results) 1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-03 00:37:58,384 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-03 00:37:58,392 [ scc.git] DEBUG omeroweb/webgateway/views.py | 6 ++++++
2024-10-03 00:37:58,393 [ scc.git] DEBUG 1 file changed, 6 insertions(+)
2024-10-03 00:37:58,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:37:58,676 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-03 00:37:58,684 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:37:58,689 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Allow users to click a group name to show data from all users in that group) aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-03 00:37:58,711 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-03 00:37:58,715 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_content.html | 6 +++++-
2024-10-03 00:37:58,715 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_dropdown2.html | 2 --
2024-10-03 00:37:58,715 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 3 deletions(-)
2024-10-03 00:37:59,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:37:59,060 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-03 00:37:59,106 [ scc.git] DEBUG Get sha1 of %s
2024-10-03 00:37:59,106 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-03 00:37:59,114 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-03 00:37:59,163 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-03 00:37:59,177 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe355dd4b20> has no local changes
2024-10-03 00:37:59,178 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
Generated by OMERO-python-superbuild-push#189 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/189/)'
2024-10-03 00:37:59,190 [ scc.git] DEBUG [detached HEAD d1bd88cad] merge master -Dorg -Ssuccess-only
2024-10-03 00:37:59,190 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-03 00:37:59,191 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-03 00:37:59,248 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-10-03 00:37:59,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:37:59,476 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-10-03 00:37:59,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:37:59,859 [ scc.config] DEBUG Found submodule.omero-py.url
2024-10-03 00:38:00,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:38:00,241 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-10-03 00:38:00,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:38:00,633 [ scc.config] DEBUG Found submodule.omero-web.url
2024-10-03 00:38:01,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-03 00:38:01,017 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-03 00:38:01,050 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe35816bb80> has local changes
2024-10-03 00:38:01,050 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
Generated by OMERO-python-superbuild-push#189 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/189/)'
2024-10-03 00:38:01,060 [ scc.git] DEBUG [detached HEAD 30ba54a] merge master -Dorg -Ssuccess-only
2024-10-03 00:38:01,061 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-03 00:38:01,061 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-10-03 00:38:01,061 [ scc.merge] INFO Already up to date.
2024-10-03 00:38:01,061 [ scc.merge] INFO
2024-10-03 00:38:01,061 [ scc.merge] INFO Merged PRs:
2024-10-03 00:38:01,061 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-03 00:38:01,061 [ scc.merge] INFO
2024-10-03 00:38:01,061 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-10-03 00:38:01,061 [ scc.merge] INFO Already up to date.
2024-10-03 00:38:01,061 [ scc.merge] INFO
2024-10-03 00:38:01,061 [ scc.merge] INFO Merged PRs:
2024-10-03 00:38:01,061 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-03 00:38:01,061 [ scc.merge] INFO
2024-10-03 00:38:01,061 [ scc.merge] INFO Repository: ome/omero-marshal
2024-10-03 00:38:01,061 [ scc.merge] INFO Excluded PRs:
2024-10-03 00:38:01,061 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-10-03 00:38:01,061 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-10-03 00:38:01,061 [ scc.merge] INFO Already up to date.
2024-10-03 00:38:01,061 [ scc.merge] INFO
2024-10-03 00:38:01,062 [ scc.merge] INFO Merged PRs:
2024-10-03 00:38:01,062 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-03 00:38:01,062 [ scc.merge] INFO
2024-10-03 00:38:01,062 [ scc.merge] INFO Repository: ome/omero-py
2024-10-03 00:38:01,062 [ scc.merge] INFO Excluded PRs:
2024-10-03 00:38:01,062 [ scc.merge] INFO - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
2024-10-03 00:38:01,062 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-10-03 00:38:01,062 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-10-03 00:38:01,062 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-10-03 00:38:01,062 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-10-03 00:38:01,062 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-10-03 00:38:01,062 [ scc.merge] INFO Already up to date.
2024-10-03 00:38:01,062 [ scc.merge] INFO
2024-10-03 00:38:01,062 [ scc.merge] INFO Merged PRs:
2024-10-03 00:38:01,062 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-10-03 00:38:01,062 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-03 00:38:01,062 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-03 00:38:01,062 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-03 00:38:01,062 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-10-03 00:38:01,062 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-03 00:38:01,062 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-10-03 00:38:01,062 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-10-03 00:38:01,062 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation'
2024-10-03 00:38:01,062 [ scc.merge] INFO - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-03 00:38:01,062 [ scc.merge] INFO
2024-10-03 00:38:01,062 [ scc.merge] INFO Repository: ome/omero-scripts
2024-10-03 00:38:01,062 [ scc.merge] INFO Excluded PRs:
2024-10-03 00:38:01,062 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-10-03 00:38:01,062 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-10-03 00:38:01,062 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-10-03 00:38:01,062 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-10-03 00:38:01,062 [ scc.merge] INFO Already up to date.
2024-10-03 00:38:01,062 [ scc.merge] INFO
2024-10-03 00:38:01,062 [ scc.merge] INFO Merged PRs:
2024-10-03 00:38:01,063 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-03 00:38:01,063 [ scc.merge] INFO
2024-10-03 00:38:01,063 [ scc.merge] INFO Conflicting PRs (not included):
2024-10-03 00:38:01,063 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-03 00:38:01,063 [ scc.merge] INFO
2024-10-03 00:38:01,063 [ scc.merge] INFO Repository: ome/omero-web
2024-10-03 00:38:01,063 [ scc.merge] INFO Excluded PRs:
2024-10-03 00:38:01,063 [ scc.merge] INFO - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
2024-10-03 00:38:01,063 [ scc.merge] INFO - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
2024-10-03 00:38:01,063 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-10-03 00:38:01,063 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-10-03 00:38:01,063 [ scc.merge] INFO Already up to date.
2024-10-03 00:38:01,063 [ scc.merge] INFO
2024-10-03 00:38:01,063 [ scc.merge] INFO Merged PRs:
2024-10-03 00:38:01,063 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-03 00:38:01,063 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-03 00:38:01,063 [ scc.merge] INFO - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-03 00:38:01,063 [ scc.merge] INFO - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-03 00:38:01,063 [ scc.merge] INFO
2024-10-03 00:38:01,063 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-03 00:38:01,063 [ scc.git] DEBUG Calling 'git remote'
2024-10-03 00:38:01,068 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-03 00:38:01,068 [ scc.git] DEBUG Calling 'git remote'
2024-10-03 00:38:01,073 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-03 00:38:01,073 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-03 00:38:01,073 [ scc.git] DEBUG Calling 'git remote'
2024-10-03 00:38:01,077 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-03 00:38:01,078 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-03 00:38:01,078 [ scc.git] DEBUG Calling 'git remote'
2024-10-03 00:38:01,082 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-03 00:38:01,082 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-03 00:38:01,082 [ scc.git] DEBUG Calling 'git remote'
2024-10-03 00:38:01,086 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-03 00:38:01,086 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-03 00:38:01,086 [ scc.git] DEBUG Calling 'git remote'
2024-10-03 00:38:01,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 4fd72efa
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from da5b7d11f
nothing to commit, working tree clean
HEAD detached from e849d72
nothing to commit, working tree clean
2024-10-03 00:38:29,116 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
![[Jenkins]](/jenkins/static/03a0bb70/images/svgs/logo.svg){kind=logo}
