Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-10-05 00:40:48,761 [ scc.config] DEBUG Found github.token
2024-10-05 00:40:48,763 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-05 00:40:48,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:40:49,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:40:49,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-05 00:40:49,733 [ scc.gh] DEBUG 4622 remaining from 5000 (Reset at 01:10
2024-10-05 00:40:49,734 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-05 00:40:49,739 [ scc.git] DEBUG Check current status
2024-10-05 00:40:49,740 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-05 00:40:49,746 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-05 00:40:49,746 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-05 00:40:49,794 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-05 00:40:49,796 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-05 00:40:49,800 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-05 00:40:49,803 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-05 00:40:49,807 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-05 00:40:49,812 [ scc.config] DEBUG Found remote.origin.url
2024-10-05 00:40:50,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-05 00:40:50,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-05 00:40:51,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-05 00:40:51,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-05 00:40:51,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-05 00:40:51,838 [ scc.git] DEBUG Resetting...
2024-10-05 00:40:51,838 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-05 00:40:51,844 [ scc.git] DEBUG HEAD is now at e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-05 00:40:51,845 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-05 00:40:51,904 [ scc.git] DEBUG Check current status
2024-10-05 00:40:51,904 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-05 00:40:51,909 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-05 00:40:51,909 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-05 00:40:51,959 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-05 00:40:51,962 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-05 00:40:51,966 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-05 00:40:51,970 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-05 00:40:51,975 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-05 00:40:51,976 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-05 00:40:51,976 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-05 00:40:51,976 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-05 00:40:51,976 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-05 00:40:51,977 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-05 00:40:51,977 [ scc.repo] DEBUG ## PRs found:
2024-10-05 00:40:52,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-05 00:40:52,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-05 00:40:52,766 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-05 00:40:52,766 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-05 00:40:52,766 [ scc.repo] DEBUG ## Branches found:
2024-10-05 00:40:52,766 [ scc.git] DEBUG Get sha1 of %s
2024-10-05 00:40:52,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:40:52,771 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-05 00:40:52,776 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-05 00:40:52,776 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-05 00:40:52,781 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-05 00:40:52,786 [ scc.git] DEBUG Already up to date.
2024-10-05 00:40:52,787 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-05 00:40:53,135 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-05 00:40:53,135 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-05 00:40:53,141 [ scc.git] DEBUG ## Unique users: []
2024-10-05 00:40:53,141 [ scc.git] DEBUG Get sha1 of %s
2024-10-05 00:40:53,141 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:40:53,146 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-05 00:40:53,182 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:40:53,187 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-05 00:40:53,199 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-05 00:40:53,201 [ scc.git] DEBUG omero-py | 2 +-
2024-10-05 00:40:53,202 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-10-05 00:40:53,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:40:53,366 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-05 00:40:53,562 [ scc.git] DEBUG Submodule path 'omero-py': checked out '4fd72efaa8cdbec9da98e1d28678af16878a86ba'
2024-10-05 00:40:53,563 [ scc.git] DEBUG Get sha1 of %s
2024-10-05 00:40:53,563 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:40:53,568 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-05 00:40:54,057 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f926373ab80> has no local changes
2024-10-05 00:40:54,057 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Generated by OMERO-python-superbuild-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/191/)'
2024-10-05 00:40:54,088 [ scc.git] DEBUG [detached HEAD 5604ab8] merge master -Dorg -Snone
2024-10-05 00:40:54,088 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-05 00:40:54,089 [ scc.merge] INFO Already up to date.
2024-10-05 00:40:54,089 [ scc.merge] INFO
2024-10-05 00:40:54,089 [ scc.merge] INFO Merged PRs:
2024-10-05 00:40:54,089 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-05 00:40:54,089 [ scc.merge] INFO
2024-10-05 00:40:54,089 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-05 00:40:54,089 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-05 00:40:56,456 [ scc.config] DEBUG Found github.token
2024-10-05 00:40:56,460 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-05 00:40:56,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:40:57,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:40:57,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-05 00:40:57,392 [ scc.gh] DEBUG 4612 remaining from 5000 (Reset at 01:10
2024-10-05 00:40:57,393 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-05 00:40:57,398 [ scc.git] DEBUG Check current status
2024-10-05 00:40:57,398 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-05 00:40:57,403 [ scc.git] DEBUG 5604ab8 merge master -Dorg -Snone
2024-10-05 00:40:57,404 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-05 00:40:57,447 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-05 00:40:57,450 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-05 00:40:57,455 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-05 00:40:57,460 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-05 00:40:57,464 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-05 00:40:57,471 [ scc.config] DEBUG Found remote.origin.url
2024-10-05 00:40:57,471 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-10-05 00:40:57,473 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-05 00:40:57,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-05 00:40:58,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-05 00:40:58,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-05 00:40:59,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-05 00:40:59,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-05 00:40:59,451 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-05 00:40:59,503 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-05 00:40:59,503 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-05 00:40:59,507 [ scc.git] DEBUG Check current status
2024-10-05 00:40:59,507 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-05 00:40:59,512 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-10-05 00:40:59,512 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-05 00:40:59,558 [ scc.config] DEBUG Found remote.origin.url
2024-10-05 00:40:59,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-10-05 00:41:00,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-05 00:41:00,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-05 00:41:01,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-05 00:41:01,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-05 00:41:01,677 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-05 00:41:01,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-05 00:41:01,718 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-05 00:41:01,718 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-05 00:41:01,722 [ scc.git] DEBUG Check current status
2024-10-05 00:41:01,723 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-05 00:41:01,726 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-10-05 00:41:01,727 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-05 00:41:01,775 [ scc.config] DEBUG Found remote.origin.url
2024-10-05 00:41:02,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-10-05 00:41:02,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-05 00:41:03,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-05 00:41:03,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-05 00:41:03,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-05 00:41:03,844 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-05 00:41:03,887 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-05 00:41:03,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-05 00:41:03,888 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-05 00:41:03,892 [ scc.git] DEBUG Check current status
2024-10-05 00:41:03,893 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-05 00:41:03,951 [ scc.git] DEBUG 4fd72efa Bump version: 5.19.5 → 5.19.6.dev0
2024-10-05 00:41:03,952 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-05 00:41:04,002 [ scc.config] DEBUG Found remote.origin.url
2024-10-05 00:41:04,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-10-05 00:41:04,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-05 00:41:05,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-05 00:41:05,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-05 00:41:05,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-05 00:41:05,948 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-05 00:41:05,992 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-05 00:41:05,994 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-05 00:41:05,994 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-05 00:41:05,999 [ scc.git] DEBUG Check current status
2024-10-05 00:41:05,999 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-05 00:41:06,019 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-05 00:41:06,020 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-05 00:41:06,076 [ scc.config] DEBUG Found remote.origin.url
2024-10-05 00:41:06,076 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-10-05 00:41:06,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-10-05 00:41:06,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-05 00:41:07,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-05 00:41:07,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-05 00:41:08,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-05 00:41:08,032 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-05 00:41:08,075 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-05 00:41:08,076 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-05 00:41:08,076 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-05 00:41:08,081 [ scc.git] DEBUG Check current status
2024-10-05 00:41:08,081 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-05 00:41:08,087 [ scc.git] DEBUG da5b7d11f Bump version: 5.27.2 → 5.27.3.dev0
2024-10-05 00:41:08,087 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-05 00:41:08,135 [ scc.config] DEBUG Found remote.origin.url
2024-10-05 00:41:08,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-10-05 00:41:08,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-05 00:41:09,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-05 00:41:09,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-05 00:41:10,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-05 00:41:10,138 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-05 00:41:10,179 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-05 00:41:10,179 [ scc.git] DEBUG Resetting...
2024-10-05 00:41:10,180 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-05 00:41:10,186 [ scc.git] DEBUG HEAD is now at 5604ab8 merge master -Dorg -Snone
2024-10-05 00:41:10,186 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-05 00:41:10,244 [ scc.git] DEBUG Check current status
2024-10-05 00:41:10,245 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-05 00:41:10,249 [ scc.git] DEBUG 5604ab8 merge master -Dorg -Snone
2024-10-05 00:41:10,250 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-05 00:41:10,294 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-05 00:41:10,298 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-05 00:41:10,301 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-05 00:41:10,306 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-05 00:41:10,309 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-05 00:41:10,310 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-05 00:41:10,311 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-05 00:41:10,311 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-05 00:41:10,311 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-05 00:41:10,311 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-05 00:41:10,311 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-10-05 00:41:10,311 [ scc.repo] DEBUG ## PRs found:
2024-10-05 00:41:10,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-05 00:41:11,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-05 00:41:11,083 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-05 00:41:11,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-05 00:41:12,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-05 00:41:12,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-05 00:41:13,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/9660559833988d271074de56e54f2462a7be74e9?per_page=1 HTTP/1.1" 200 2
2024-10-05 00:41:13,062 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-05 00:41:13,062 [ scc.repo] DEBUG ## Branches found:
2024-10-05 00:41:13,062 [ scc.git] DEBUG Get sha1 of %s
2024-10-05 00:41:13,062 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:41:13,068 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-05 00:41:13,072 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-05 00:41:13,073 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-05 00:41:13,076 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-05 00:41:13,081 [ scc.git] DEBUG Already up to date.
2024-10-05 00:41:13,081 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-05 00:41:13,917 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-05 00:41:13,918 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-05 00:41:13,923 [ scc.git] DEBUG ## Unique users: []
2024-10-05 00:41:13,923 [ scc.git] DEBUG Get sha1 of %s
2024-10-05 00:41:13,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:41:13,928 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-05 00:41:13,932 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:41:13,937 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-05 00:41:13,941 [ scc.git] DEBUG Already up to date.
2024-10-05 00:41:14,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:41:14,123 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-05 00:41:14,168 [ scc.git] DEBUG Get sha1 of %s
2024-10-05 00:41:14,168 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:41:14,173 [ scc.repo] DEBUG ## PRs found:
2024-10-05 00:41:14,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-10-05 00:41:15,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-10-05 00:41:15,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-10-05 00:41:16,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-05 00:41:16,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-05 00:41:17,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-05 00:41:17,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-10-05 00:41:17,555 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-05 00:41:17,555 [ scc.repo] DEBUG ## Branches found:
2024-10-05 00:41:17,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-05 00:41:17,556 [ scc.git] DEBUG Get sha1 of %s
2024-10-05 00:41:17,556 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:41:17,562 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-05 00:41:17,569 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-05 00:41:17,569 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-05 00:41:17,577 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-05 00:41:17,583 [ scc.git] DEBUG Already up to date.
2024-10-05 00:41:17,583 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-10-05 00:41:17,933 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-10-05 00:41:17,934 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-10-05 00:41:17,938 [ scc.git] DEBUG ## Unique users: []
2024-10-05 00:41:17,938 [ scc.git] DEBUG Get sha1 of %s
2024-10-05 00:41:17,939 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:41:17,943 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-05 00:41:17,948 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:41:17,953 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-05 00:41:18,170 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-10-05 00:41:18,170 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-10-05 00:41:18,170 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-10-05 00:41:18,170 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-10-05 00:41:18,170 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-10-05 00:41:18,170 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-10-05 00:41:18,170 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-10-05 00:41:18,170 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-10-05 00:41:18,170 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-10-05 00:41:18,171 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-05 00:41:18,175 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-10-05 00:41:18,175 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-10-05 00:41:18,175 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-10-05 00:41:18,175 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-10-05 00:41:18,175 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-10-05 00:41:18,177 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-10-05 00:41:18,177 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-10-05 00:41:18,177 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-10-05 00:41:18,177 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-10-05 00:41:18,177 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-10-05 00:41:18,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:41:18,316 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-05 00:41:18,357 [ scc.git] DEBUG Get sha1 of %s
2024-10-05 00:41:18,357 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:41:18,362 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-05 00:41:18,401 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-05 00:41:18,408 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f94596e3f70> has no local changes
2024-10-05 00:41:18,408 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/191/)'
2024-10-05 00:41:18,417 [ scc.git] DEBUG [detached HEAD 0866f65] merge master -Dorg -Ssuccess-only
2024-10-05 00:41:18,417 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-05 00:41:18,418 [ scc.repo] DEBUG ## PRs found:
2024-10-05 00:41:18,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-10-05 00:41:19,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-10-05 00:41:19,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-10-05 00:41:20,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-05 00:41:20,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-05 00:41:21,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-05 00:41:21,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-10-05 00:41:21,655 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-05 00:41:22,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-10-05 00:41:22,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-10-05 00:41:23,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-10-05 00:41:23,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-10-05 00:41:23,428 [ scc.repo] DEBUG ## Branches found:
2024-10-05 00:41:23,428 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-05 00:41:23,428 [ scc.git] DEBUG Get sha1 of %s
2024-10-05 00:41:23,429 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:41:23,436 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-05 00:41:23,442 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-05 00:41:23,442 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-05 00:41:23,450 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-05 00:41:23,460 [ scc.git] DEBUG Already up to date.
2024-10-05 00:41:23,460 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-10-05 00:41:23,815 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-10-05 00:41:23,816 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-10-05 00:41:23,821 [ scc.git] DEBUG ## Unique users: []
2024-10-05 00:41:23,822 [ scc.git] DEBUG Get sha1 of %s
2024-10-05 00:41:23,822 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:41:23,828 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-05 00:41:23,837 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:41:23,843 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-05 00:41:23,857 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-10-05 00:41:23,857 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-05 00:41:23,860 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-10-05 00:41:23,860 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-10-05 00:41:23,861 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-10-05 00:41:23,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:41:23,990 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-05 00:41:24,049 [ scc.git] DEBUG Get sha1 of %s
2024-10-05 00:41:24,049 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:41:24,056 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-05 00:41:24,096 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-05 00:41:24,104 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f945b9e9ee0> has no local changes
2024-10-05 00:41:24,105 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/191/)'
2024-10-05 00:41:24,115 [ scc.git] DEBUG [detached HEAD 5498691] merge master -Dorg -Ssuccess-only
2024-10-05 00:41:24,115 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-05 00:41:24,116 [ scc.repo] DEBUG ## PRs found:
2024-10-05 00:41:24,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-10-05 00:41:25,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/431 HTTP/1.1" 200 None
2024-10-05 00:41:25,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-05 00:41:26,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-05 00:41:26,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-05 00:41:27,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-05 00:41:27,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0e500ec05bf9227b66b28a480b40e0936241d953?per_page=1 HTTP/1.1" 200 None
2024-10-05 00:41:27,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-05 00:41:28,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/status HTTP/1.1" 200 None
2024-10-05 00:41:28,385 [ scc.repo] DEBUG - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-05 00:41:28,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None
2024-10-05 00:41:29,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None
2024-10-05 00:41:29,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None
2024-10-05 00:41:29,778 [ scc.repo] DEBUG # ... Include label: include
2024-10-05 00:41:30,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-05 00:41:30,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-05 00:41:31,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-05 00:41:31,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-10-05 00:41:32,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-10-05 00:41:32,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-05 00:41:33,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-05 00:41:33,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-05 00:41:34,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-05 00:41:34,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-10-05 00:41:34,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-05 00:41:35,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-10-05 00:41:35,475 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-10-05 00:41:35,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-10-05 00:41:36,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-10-05 00:41:36,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-10-05 00:41:37,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-05 00:41:37,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-05 00:41:38,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-10-05 00:41:38,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-05 00:41:39,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-05 00:41:39,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-05 00:41:40,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-05 00:41:40,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-10-05 00:41:41,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-05 00:41:41,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-10-05 00:41:41,456 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-10-05 00:41:41,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-10-05 00:41:41,907 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-10-05 00:41:42,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-10-05 00:41:42,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-10-05 00:41:43,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-05 00:41:43,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-05 00:41:44,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-05 00:41:44,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-10-05 00:41:44,507 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-05 00:41:44,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-10-05 00:41:45,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-10-05 00:41:45,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-05 00:41:46,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-05 00:41:46,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-05 00:41:47,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-05 00:41:47,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-10-05 00:41:48,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-05 00:41:48,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-10-05 00:41:48,636 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-10-05 00:41:49,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-10-05 00:41:49,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-10-05 00:41:49,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-10-05 00:41:50,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-10-05 00:41:50,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-05 00:41:51,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-05 00:41:51,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-05 00:41:52,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-10-05 00:41:52,173 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-05 00:41:52,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-10-05 00:41:53,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-05 00:41:53,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-05 00:41:54,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-05 00:41:54,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-10-05 00:41:54,579 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-05 00:41:55,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-10-05 00:41:55,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-10-05 00:41:56,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-05 00:41:56,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-05 00:41:57,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-05 00:41:57,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-10-05 00:41:57,443 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-05 00:41:57,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-10-05 00:41:58,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-10-05 00:41:58,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-05 00:41:59,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-05 00:41:59,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-05 00:42:00,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-10-05 00:42:00,276 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-10-05 00:42:00,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-10-05 00:42:01,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-10-05 00:42:01,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-10-05 00:42:02,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-10-05 00:42:02,108 [ scc.repo] DEBUG ## Branches found:
2024-10-05 00:42:02,108 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-05 00:42:02,108 [ scc.git] DEBUG Get sha1 of %s
2024-10-05 00:42:02,108 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:42:02,116 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-05 00:42:02,124 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-05 00:42:02,124 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-05 00:42:02,130 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-05 00:42:02,134 [ scc.git] DEBUG Already up to date.
2024-10-05 00:42:02,134 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-10-05 00:42:04,293 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-05 00:42:04,293 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-10-05 00:42:04,300 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-10-05 00:42:04,603 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-05 00:42:04,603 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-10-05 00:42:04,609 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-10-05 00:42:04,919 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-05 00:42:04,919 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-10-05 00:42:04,926 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-10-05 00:42:05,260 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-05 00:42:05,260 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-10-05 00:42:05,266 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-10-05 00:42:05,666 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-05 00:42:05,666 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-10-05 00:42:05,671 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-10-05 00:42:05,965 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-05 00:42:05,965 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-10-05 00:42:05,970 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-10-05 00:42:06,301 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-05 00:42:06,302 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-10-05 00:42:06,311 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-10-05 00:42:06,661 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-05 00:42:06,661 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-10-05 00:42:06,666 [ scc.git] DEBUG Calling 'git fetch origin pull/431/head'
2024-10-05 00:42:07,034 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-05 00:42:07,034 [ scc.git] DEBUG * branch refs/pull/431/head -> FETCH_HEAD
2024-10-05 00:42:07,041 [ scc.git] DEBUG ## Unique users: []
2024-10-05 00:42:07,041 [ scc.git] DEBUG Get sha1 of %s
2024-10-05 00:42:07,041 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:42:07,046 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-05 00:42:07,058 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:42:07,062 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-05 00:42:07,300 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-10-05 00:42:07,300 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-10-05 00:42:07,301 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-05 00:42:07,305 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-10-05 00:42:07,305 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-10-05 00:42:07,305 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-10-05 00:42:07,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:42:07,438 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-05 00:42:07,450 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:42:07,456 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-05 00:42:07,582 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-05 00:42:07,583 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-10-05 00:42:07,583 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-05 00:42:07,591 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-10-05 00:42:07,591 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-10-05 00:42:07,591 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-10-05 00:42:07,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:42:07,859 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-05 00:42:07,873 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:42:07,878 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-05 00:42:07,900 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-10-05 00:42:07,901 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-05 00:42:07,903 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-10-05 00:42:07,903 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-10-05 00:42:08,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:42:08,241 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-05 00:42:08,254 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:42:08,259 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-05 00:42:08,416 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-10-05 00:42:08,416 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-10-05 00:42:08,417 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-05 00:42:08,421 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-10-05 00:42:08,421 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-10-05 00:42:08,421 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-10-05 00:42:08,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:42:08,620 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-05 00:42:08,633 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:42:08,637 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-05 00:42:08,667 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-05 00:42:08,670 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-10-05 00:42:08,670 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-10-05 00:42:08,670 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-10-05 00:42:08,670 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-10-05 00:42:08,670 [ scc.git] DEBUG create mode 100644 connect.py
2024-10-05 00:42:09,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:42:09,007 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-05 00:42:09,018 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:42:09,023 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-05 00:42:09,070 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-10-05 00:42:09,071 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-05 00:42:09,074 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-10-05 00:42:09,075 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-10-05 00:42:09,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:42:09,387 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-10-05 00:42:09,400 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:42:09,406 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-10-05 00:42:09,536 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-10-05 00:42:09,537 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-05 00:42:09,541 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-10-05 00:42:09,541 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-10-05 00:42:09,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:42:09,780 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-05 00:42:09,793 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:42:09,798 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-05 00:42:10,033 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-05 00:42:10,034 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-05 00:42:10,041 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-10-05 00:42:10,041 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-10-05 00:42:10,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:42:10,182 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-05 00:42:10,198 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:42:10,204 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 431 (omero.HdfStorage.update: add size check on data.rowNumbers) 0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-05 00:42:10,225 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-05 00:42:10,227 [ scc.git] DEBUG src/omero/hdfstorageV2.py | 1 +
2024-10-05 00:42:10,227 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2024-10-05 00:42:10,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:42:10,571 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-05 00:42:10,608 [ scc.git] DEBUG Get sha1 of %s
2024-10-05 00:42:10,608 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:42:10,612 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-05 00:42:10,648 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-05 00:42:10,657 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f945868df40> has no local changes
2024-10-05 00:42:10,657 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 427 Rdornier 'Add fileset folder creation' (status: action_required)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Generated by OMERO-python-superbuild-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/191/)'
2024-10-05 00:42:10,667 [ scc.git] DEBUG [detached HEAD 6fa7c00e] merge master -Dorg -Ssuccess-only
2024-10-05 00:42:10,667 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-05 00:42:10,668 [ scc.git] INFO Overriding base-branch from master to develop
2024-10-05 00:42:10,668 [ scc.repo] DEBUG ## PRs found:
2024-10-05 00:42:11,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-10-05 00:42:11,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-10-05 00:42:12,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-05 00:42:12,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-05 00:42:13,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-05 00:42:13,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-05 00:42:13,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-10-05 00:42:13,940 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-05 00:42:14,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-10-05 00:42:14,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-10-05 00:42:15,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-10-05 00:42:15,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-10-05 00:42:16,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-10-05 00:42:16,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-10-05 00:42:17,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-05 00:42:17,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-05 00:42:18,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-05 00:42:18,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-10-05 00:42:18,730 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-05 00:42:19,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-10-05 00:42:19,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-10-05 00:42:20,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-10-05 00:42:20,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-10-05 00:42:20,995 [ scc.repo] DEBUG ## Branches found:
2024-10-05 00:42:20,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-05 00:42:20,996 [ scc.git] DEBUG Get sha1 of %s
2024-10-05 00:42:20,996 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:42:21,001 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-10-05 00:42:21,008 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-05 00:42:21,008 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-10-05 00:42:21,015 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-10-05 00:42:21,020 [ scc.git] DEBUG Already up to date.
2024-10-05 00:42:21,021 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-10-05 00:42:21,656 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-05 00:42:21,657 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-10-05 00:42:21,661 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-10-05 00:42:22,202 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-05 00:42:22,202 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-10-05 00:42:22,207 [ scc.git] DEBUG ## Unique users: []
2024-10-05 00:42:22,208 [ scc.git] DEBUG Get sha1 of %s
2024-10-05 00:42:22,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:42:22,213 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-05 00:42:22,220 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:42:22,225 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-05 00:42:22,335 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-10-05 00:42:22,336 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-10-05 00:42:22,336 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-10-05 00:42:22,336 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-10-05 00:42:22,341 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-05 00:42:22,347 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-05 00:42:22,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:42:22,476 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-05 00:42:22,483 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-05 00:42:22,488 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#191](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/191/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/191/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-10-05 00:42:22,492 [ scc.config] DEBUG Found github.token
2024-10-05 00:42:22,492 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-10-05 00:42:22,492 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-05 00:42:22,497 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:42:22,500 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-05 00:42:22,586 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-05 00:42:22,589 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-10-05 00:42:22,589 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-10-05 00:42:22,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:42:22,857 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-05 00:42:22,900 [ scc.git] DEBUG Get sha1 of %s
2024-10-05 00:42:22,901 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:42:22,906 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-05 00:42:22,948 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-05 00:42:22,954 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f94596e3550> has no local changes
2024-10-05 00:42:22,954 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/191/)'
2024-10-05 00:42:22,964 [ scc.git] DEBUG [detached HEAD 4aaf25e] merge master -Dorg -Ssuccess-only
2024-10-05 00:42:22,965 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-05 00:42:22,965 [ scc.repo] DEBUG ## PRs found:
2024-10-05 00:42:23,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-10-05 00:42:23,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583 HTTP/1.1" 200 None
2024-10-05 00:42:24,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-05 00:42:24,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-05 00:42:25,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-05 00:42:25,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-05 00:42:26,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/aa50f469842b9687c74df8765d72241e6e37d32c?per_page=1 HTTP/1.1" 200 None
2024-10-05 00:42:27,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-05 00:42:27,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/status HTTP/1.1" 200 None
2024-10-05 00:42:27,448 [ scc.repo] DEBUG - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-05 00:42:27,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581 HTTP/1.1" 200 None
2024-10-05 00:42:28,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581/comments HTTP/1.1" 200 None
2024-10-05 00:42:28,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/580 HTTP/1.1" 200 None
2024-10-05 00:42:29,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-05 00:42:29,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-05 00:42:30,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-05 00:42:30,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-05 00:42:31,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc?per_page=1 HTTP/1.1" 200 None
2024-10-05 00:42:31,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-05 00:42:32,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/status HTTP/1.1" 200 None
2024-10-05 00:42:32,222 [ scc.repo] DEBUG - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-05 00:42:32,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568 HTTP/1.1" 200 None
2024-10-05 00:42:33,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568/comments HTTP/1.1" 200 None
2024-10-05 00:42:33,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-10-05 00:42:33,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-10-05 00:42:34,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-10-05 00:42:34,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-10-05 00:42:35,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-05 00:42:35,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-05 00:42:36,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-05 00:42:36,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-05 00:42:37,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-10-05 00:42:37,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-05 00:42:38,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-10-05 00:42:38,103 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-05 00:42:38,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-10-05 00:42:38,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-10-05 00:42:39,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-05 00:42:40,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-05 00:42:40,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-05 00:42:40,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-05 00:42:41,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-10-05 00:42:41,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-05 00:42:42,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-10-05 00:42:42,306 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-05 00:42:42,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-10-05 00:42:43,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-10-05 00:42:43,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-10-05 00:42:44,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-05 00:42:44,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-05 00:42:44,702 [ scc.repo] DEBUG ## Branches found:
2024-10-05 00:42:44,702 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-05 00:42:44,702 [ scc.git] DEBUG Get sha1 of %s
2024-10-05 00:42:44,702 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:42:44,710 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-05 00:42:44,716 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-05 00:42:44,717 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-05 00:42:44,724 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-05 00:42:44,731 [ scc.git] DEBUG Already up to date.
2024-10-05 00:42:44,731 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-10-05 00:42:45,534 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-05 00:42:45,534 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-10-05 00:42:45,539 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-10-05 00:42:45,902 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-05 00:42:45,903 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-10-05 00:42:45,911 [ scc.git] DEBUG Calling 'git fetch origin pull/580/head'
2024-10-05 00:42:46,317 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-05 00:42:46,317 [ scc.git] DEBUG * branch refs/pull/580/head -> FETCH_HEAD
2024-10-05 00:42:46,322 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head'
2024-10-05 00:42:46,619 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-05 00:42:46,619 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD
2024-10-05 00:42:46,624 [ scc.git] DEBUG ## Unique users: []
2024-10-05 00:42:46,624 [ scc.git] DEBUG Get sha1 of %s
2024-10-05 00:42:46,624 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:42:46,629 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-05 00:42:46,636 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:42:46,641 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-05 00:42:46,714 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-10-05 00:42:46,715 [ scc.git] DEBUG Auto-merging setup.py
2024-10-05 00:42:46,716 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-05 00:42:46,720 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-10-05 00:42:46,720 [ scc.git] DEBUG setup.py | 1 +
2024-10-05 00:42:46,720 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-10-05 00:42:46,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:42:46,856 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-05 00:42:46,864 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:42:46,868 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-05 00:42:46,963 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-10-05 00:42:46,963 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-10-05 00:42:46,964 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-05 00:42:46,968 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-10-05 00:42:46,968 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-10-05 00:42:46,968 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-10-05 00:42:47,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:42:47,240 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-05 00:42:47,248 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:42:47,253 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 580 (omeroweb.webgateway.obj_id_bitmask: handle empty query results) 1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-05 00:42:47,302 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-05 00:42:47,307 [ scc.git] DEBUG omeroweb/webgateway/views.py | 6 ++++++
2024-10-05 00:42:47,307 [ scc.git] DEBUG 1 file changed, 6 insertions(+)
2024-10-05 00:42:47,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:42:47,624 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-05 00:42:47,634 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:42:47,644 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Allow users to click a group name to show data from all users in that group) aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-05 00:42:47,679 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-05 00:42:47,683 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_content.html | 6 +++++-
2024-10-05 00:42:47,683 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_dropdown2.html | 2 --
2024-10-05 00:42:47,683 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 3 deletions(-)
2024-10-05 00:42:48,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:42:48,013 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-05 00:42:48,051 [ scc.git] DEBUG Get sha1 of %s
2024-10-05 00:42:48,052 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-05 00:42:48,056 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-05 00:42:48,095 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-05 00:42:48,107 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f94585e4b20> has no local changes
2024-10-05 00:42:48,107 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
Generated by OMERO-python-superbuild-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/191/)'
2024-10-05 00:42:48,120 [ scc.git] DEBUG [detached HEAD ae08393ae] merge master -Dorg -Ssuccess-only
2024-10-05 00:42:48,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-05 00:42:48,120 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-05 00:42:48,169 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-10-05 00:42:48,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:42:48,411 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-10-05 00:42:48,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:42:48,796 [ scc.config] DEBUG Found submodule.omero-py.url
2024-10-05 00:42:49,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:42:49,184 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-10-05 00:42:49,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:42:49,570 [ scc.config] DEBUG Found submodule.omero-web.url
2024-10-05 00:42:49,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-05 00:42:50,001 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-05 00:42:50,032 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f945998cb80> has local changes
2024-10-05 00:42:50,032 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 427 Rdornier 'Add fileset folder creation' (status: action_required)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
Generated by OMERO-python-superbuild-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/191/)'
2024-10-05 00:42:50,042 [ scc.git] DEBUG [detached HEAD d00c75a] merge master -Dorg -Ssuccess-only
2024-10-05 00:42:50,042 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-05 00:42:50,042 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-10-05 00:42:50,042 [ scc.merge] INFO Already up to date.
2024-10-05 00:42:50,042 [ scc.merge] INFO
2024-10-05 00:42:50,042 [ scc.merge] INFO Merged PRs:
2024-10-05 00:42:50,042 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-05 00:42:50,042 [ scc.merge] INFO
2024-10-05 00:42:50,042 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-10-05 00:42:50,042 [ scc.merge] INFO Already up to date.
2024-10-05 00:42:50,042 [ scc.merge] INFO
2024-10-05 00:42:50,042 [ scc.merge] INFO Merged PRs:
2024-10-05 00:42:50,042 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-05 00:42:50,042 [ scc.merge] INFO
2024-10-05 00:42:50,042 [ scc.merge] INFO Repository: ome/omero-marshal
2024-10-05 00:42:50,042 [ scc.merge] INFO Excluded PRs:
2024-10-05 00:42:50,043 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-10-05 00:42:50,043 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-10-05 00:42:50,043 [ scc.merge] INFO Already up to date.
2024-10-05 00:42:50,043 [ scc.merge] INFO
2024-10-05 00:42:50,043 [ scc.merge] INFO Merged PRs:
2024-10-05 00:42:50,043 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-05 00:42:50,043 [ scc.merge] INFO
2024-10-05 00:42:50,043 [ scc.merge] INFO Repository: ome/omero-py
2024-10-05 00:42:50,043 [ scc.merge] INFO Excluded PRs:
2024-10-05 00:42:50,043 [ scc.merge] INFO - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
2024-10-05 00:42:50,043 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation' (status: action_required)
2024-10-05 00:42:50,043 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-10-05 00:42:50,043 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-10-05 00:42:50,043 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-10-05 00:42:50,043 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-10-05 00:42:50,043 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-10-05 00:42:50,043 [ scc.merge] INFO Already up to date.
2024-10-05 00:42:50,043 [ scc.merge] INFO
2024-10-05 00:42:50,043 [ scc.merge] INFO Merged PRs:
2024-10-05 00:42:50,043 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-10-05 00:42:50,043 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-05 00:42:50,043 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-05 00:42:50,043 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-05 00:42:50,043 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-10-05 00:42:50,043 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-05 00:42:50,043 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-10-05 00:42:50,043 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-10-05 00:42:50,043 [ scc.merge] INFO - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-05 00:42:50,043 [ scc.merge] INFO
2024-10-05 00:42:50,043 [ scc.merge] INFO Repository: ome/omero-scripts
2024-10-05 00:42:50,043 [ scc.merge] INFO Excluded PRs:
2024-10-05 00:42:50,043 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-10-05 00:42:50,043 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-10-05 00:42:50,043 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-10-05 00:42:50,043 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-10-05 00:42:50,043 [ scc.merge] INFO Already up to date.
2024-10-05 00:42:50,043 [ scc.merge] INFO
2024-10-05 00:42:50,044 [ scc.merge] INFO Merged PRs:
2024-10-05 00:42:50,044 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-05 00:42:50,044 [ scc.merge] INFO
2024-10-05 00:42:50,044 [ scc.merge] INFO Conflicting PRs (not included):
2024-10-05 00:42:50,044 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-05 00:42:50,044 [ scc.merge] INFO
2024-10-05 00:42:50,044 [ scc.merge] INFO Repository: ome/omero-web
2024-10-05 00:42:50,044 [ scc.merge] INFO Excluded PRs:
2024-10-05 00:42:50,044 [ scc.merge] INFO - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
2024-10-05 00:42:50,044 [ scc.merge] INFO - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
2024-10-05 00:42:50,044 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-10-05 00:42:50,044 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-10-05 00:42:50,044 [ scc.merge] INFO Already up to date.
2024-10-05 00:42:50,044 [ scc.merge] INFO
2024-10-05 00:42:50,044 [ scc.merge] INFO Merged PRs:
2024-10-05 00:42:50,044 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-05 00:42:50,044 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-05 00:42:50,044 [ scc.merge] INFO - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-05 00:42:50,044 [ scc.merge] INFO - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-05 00:42:50,044 [ scc.merge] INFO
2024-10-05 00:42:50,044 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-05 00:42:50,044 [ scc.git] DEBUG Calling 'git remote'
2024-10-05 00:42:50,049 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-05 00:42:50,049 [ scc.git] DEBUG Calling 'git remote'
2024-10-05 00:42:50,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-05 00:42:50,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-05 00:42:50,054 [ scc.git] DEBUG Calling 'git remote'
2024-10-05 00:42:50,058 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-05 00:42:50,059 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-05 00:42:50,059 [ scc.git] DEBUG Calling 'git remote'
2024-10-05 00:42:50,064 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-05 00:42:50,064 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-05 00:42:50,064 [ scc.git] DEBUG Calling 'git remote'
2024-10-05 00:42:50,069 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-05 00:42:50,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-05 00:42:50,070 [ scc.git] DEBUG Calling 'git remote'
2024-10-05 00:42:50,074 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 4fd72efa
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from da5b7d11f
nothing to commit, working tree clean
HEAD detached from e849d72
nothing to commit, working tree clean
2024-10-05 00:43:18,786 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
![[Jenkins]](/jenkins/static/4f42acd4/images/svgs/logo.svg){kind=logo}
