Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-10-08 05:23:33,296 [ scc.config] DEBUG Found github.token
2024-10-08 05:23:33,298 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-08 05:23:33,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:23:33,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:23:34,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-08 05:23:34,263 [ scc.gh] DEBUG 4347 remaining from 5000 (Reset at 05:10
2024-10-08 05:23:34,263 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-08 05:23:34,268 [ scc.git] DEBUG Check current status
2024-10-08 05:23:34,268 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-08 05:23:34,272 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-08 05:23:34,272 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-08 05:23:34,316 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-08 05:23:34,319 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-08 05:23:34,323 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-08 05:23:34,327 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-08 05:23:34,331 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-08 05:23:34,336 [ scc.config] DEBUG Found remote.origin.url
2024-10-08 05:23:34,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-08 05:23:35,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-08 05:23:35,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-08 05:23:35,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-08 05:23:36,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-08 05:23:36,382 [ scc.git] DEBUG Resetting...
2024-10-08 05:23:36,382 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-08 05:23:36,388 [ scc.git] DEBUG HEAD is now at e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-08 05:23:36,389 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-08 05:23:36,447 [ scc.git] DEBUG Check current status
2024-10-08 05:23:36,447 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-08 05:23:36,451 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-08 05:23:36,451 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-08 05:23:36,497 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-08 05:23:36,500 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-08 05:23:36,504 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-08 05:23:36,508 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-08 05:23:36,512 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-08 05:23:36,513 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-08 05:23:36,513 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-08 05:23:36,513 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-08 05:23:36,513 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-08 05:23:36,513 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-08 05:23:36,513 [ scc.repo] DEBUG ## PRs found:
2024-10-08 05:23:36,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-08 05:23:37,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-08 05:23:37,270 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-08 05:23:37,270 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-08 05:23:37,270 [ scc.repo] DEBUG ## Branches found:
2024-10-08 05:23:37,270 [ scc.git] DEBUG Get sha1 of %s
2024-10-08 05:23:37,270 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:23:37,276 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-08 05:23:37,282 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-08 05:23:37,282 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-08 05:23:37,288 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-08 05:23:37,295 [ scc.git] DEBUG Already up to date.
2024-10-08 05:23:37,295 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-08 05:23:37,598 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-08 05:23:37,599 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-08 05:23:37,605 [ scc.git] DEBUG ## Unique users: []
2024-10-08 05:23:37,605 [ scc.git] DEBUG Get sha1 of %s
2024-10-08 05:23:37,605 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:23:37,610 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-08 05:23:37,615 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:23:37,620 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-08 05:23:37,633 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-08 05:23:37,637 [ scc.git] DEBUG omero-py | 2 +-
2024-10-08 05:23:37,637 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-10-08 05:23:37,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:23:37,792 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-08 05:23:37,909 [ scc.git] DEBUG Submodule path 'omero-py': checked out '4fd72efaa8cdbec9da98e1d28678af16878a86ba'
2024-10-08 05:23:37,910 [ scc.git] DEBUG Get sha1 of %s
2024-10-08 05:23:37,910 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:23:37,914 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-08 05:23:38,249 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fabb2f00b80> has no local changes
2024-10-08 05:23:38,249 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Generated by OMERO-python-superbuild-push#194 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/194/)'
2024-10-08 05:23:38,279 [ scc.git] DEBUG [detached HEAD a8cfe13] merge master -Dorg -Snone
2024-10-08 05:23:38,279 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-08 05:23:38,279 [ scc.merge] INFO Already up to date.
2024-10-08 05:23:38,279 [ scc.merge] INFO
2024-10-08 05:23:38,279 [ scc.merge] INFO Merged PRs:
2024-10-08 05:23:38,279 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-08 05:23:38,280 [ scc.merge] INFO
2024-10-08 05:23:38,280 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-08 05:23:38,280 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
From https://github.com/ome/omero-web
e60b4edc9..c607310de pre-commit-ci-update-config -> origin/pre-commit-ci-update-config
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-08 05:23:41,218 [ scc.config] DEBUG Found github.token
2024-10-08 05:23:41,221 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-08 05:23:41,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:23:41,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:23:42,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-08 05:23:42,130 [ scc.gh] DEBUG 4337 remaining from 5000 (Reset at 05:10
2024-10-08 05:23:42,131 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-08 05:23:42,136 [ scc.git] DEBUG Check current status
2024-10-08 05:23:42,136 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-08 05:23:42,143 [ scc.git] DEBUG a8cfe13 merge master -Dorg -Snone
2024-10-08 05:23:42,144 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-08 05:23:42,191 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-08 05:23:42,194 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-08 05:23:42,197 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-08 05:23:42,201 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-08 05:23:42,204 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-08 05:23:42,209 [ scc.config] DEBUG Found remote.origin.url
2024-10-08 05:23:42,209 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-10-08 05:23:42,211 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-08 05:23:42,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-08 05:23:43,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-08 05:23:43,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-08 05:23:43,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-08 05:23:44,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-08 05:23:44,253 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-08 05:23:44,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-08 05:23:44,308 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-08 05:23:44,312 [ scc.git] DEBUG Check current status
2024-10-08 05:23:44,313 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-08 05:23:44,316 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-10-08 05:23:44,317 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-08 05:23:44,365 [ scc.config] DEBUG Found remote.origin.url
2024-10-08 05:23:44,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-10-08 05:23:45,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-08 05:23:45,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-08 05:23:45,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-08 05:23:46,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-08 05:23:46,392 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-08 05:23:46,435 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-08 05:23:46,436 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-08 05:23:46,436 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-08 05:23:46,441 [ scc.git] DEBUG Check current status
2024-10-08 05:23:46,441 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-08 05:23:46,446 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-10-08 05:23:46,446 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-08 05:23:46,494 [ scc.config] DEBUG Found remote.origin.url
2024-10-08 05:23:46,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-10-08 05:23:47,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-08 05:23:47,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-08 05:23:48,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-08 05:23:48,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-08 05:23:48,540 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-08 05:23:48,585 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-08 05:23:48,586 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-08 05:23:48,586 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-08 05:23:48,591 [ scc.git] DEBUG Check current status
2024-10-08 05:23:48,591 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-08 05:23:48,625 [ scc.git] DEBUG 4fd72efa Bump version: 5.19.5 → 5.19.6.dev0
2024-10-08 05:23:48,625 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-08 05:23:48,676 [ scc.config] DEBUG Found remote.origin.url
2024-10-08 05:23:49,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-10-08 05:23:49,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-08 05:23:49,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-08 05:23:50,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-08 05:23:50,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-08 05:23:50,724 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-08 05:23:50,768 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-08 05:23:50,770 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-08 05:23:50,770 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-08 05:23:50,776 [ scc.git] DEBUG Check current status
2024-10-08 05:23:50,776 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-08 05:23:50,797 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-08 05:23:50,797 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-08 05:23:50,843 [ scc.config] DEBUG Found remote.origin.url
2024-10-08 05:23:50,843 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-10-08 05:23:51,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-10-08 05:23:51,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-08 05:23:52,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-08 05:23:52,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-08 05:23:52,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-08 05:23:52,828 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-08 05:23:52,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-08 05:23:52,873 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-08 05:23:52,873 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-08 05:23:52,879 [ scc.git] DEBUG Check current status
2024-10-08 05:23:52,879 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-08 05:23:52,922 [ scc.git] DEBUG da5b7d11f Bump version: 5.27.2 → 5.27.3.dev0
2024-10-08 05:23:52,923 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-08 05:23:52,971 [ scc.config] DEBUG Found remote.origin.url
2024-10-08 05:23:53,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-10-08 05:23:53,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-08 05:23:54,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-08 05:23:54,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-08 05:23:54,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-08 05:23:54,949 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-08 05:23:54,998 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-08 05:23:54,998 [ scc.git] DEBUG Resetting...
2024-10-08 05:23:54,998 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-08 05:23:55,005 [ scc.git] DEBUG HEAD is now at a8cfe13 merge master -Dorg -Snone
2024-10-08 05:23:55,006 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-08 05:23:55,062 [ scc.git] DEBUG Check current status
2024-10-08 05:23:55,062 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-08 05:23:55,067 [ scc.git] DEBUG a8cfe13 merge master -Dorg -Snone
2024-10-08 05:23:55,067 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-08 05:23:55,109 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-08 05:23:55,112 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-08 05:23:55,117 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-08 05:23:55,121 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-08 05:23:55,125 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-08 05:23:55,126 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-08 05:23:55,126 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-08 05:23:55,126 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-08 05:23:55,126 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-08 05:23:55,126 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-08 05:23:55,126 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-10-08 05:23:55,127 [ scc.repo] DEBUG ## PRs found:
2024-10-08 05:23:55,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-08 05:23:55,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-08 05:23:55,869 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-08 05:23:56,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-08 05:23:56,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-08 05:23:57,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-08 05:23:57,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/9660559833988d271074de56e54f2462a7be74e9?per_page=1 HTTP/1.1" 200 2
2024-10-08 05:23:57,778 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-08 05:23:57,778 [ scc.repo] DEBUG ## Branches found:
2024-10-08 05:23:57,778 [ scc.git] DEBUG Get sha1 of %s
2024-10-08 05:23:57,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:23:57,783 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-08 05:23:57,787 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-08 05:23:57,787 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-08 05:23:57,792 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-08 05:23:57,797 [ scc.git] DEBUG Already up to date.
2024-10-08 05:23:57,797 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-08 05:23:58,172 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-08 05:23:58,172 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-08 05:23:58,177 [ scc.git] DEBUG ## Unique users: []
2024-10-08 05:23:58,178 [ scc.git] DEBUG Get sha1 of %s
2024-10-08 05:23:58,178 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:23:58,183 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-08 05:23:58,187 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:23:58,192 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-08 05:23:58,197 [ scc.git] DEBUG Already up to date.
2024-10-08 05:23:58,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:23:58,323 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-08 05:23:58,367 [ scc.git] DEBUG Get sha1 of %s
2024-10-08 05:23:58,368 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:23:58,372 [ scc.repo] DEBUG ## PRs found:
2024-10-08 05:23:58,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-10-08 05:23:59,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-10-08 05:23:59,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-10-08 05:24:00,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-08 05:24:00,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-08 05:24:01,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-08 05:24:01,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-10-08 05:24:01,549 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-08 05:24:01,549 [ scc.repo] DEBUG ## Branches found:
2024-10-08 05:24:01,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-08 05:24:01,549 [ scc.git] DEBUG Get sha1 of %s
2024-10-08 05:24:01,550 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:24:01,554 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-08 05:24:01,558 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-08 05:24:01,558 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-08 05:24:01,562 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-08 05:24:01,566 [ scc.git] DEBUG Already up to date.
2024-10-08 05:24:01,566 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-10-08 05:24:01,900 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-10-08 05:24:01,900 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-10-08 05:24:01,905 [ scc.git] DEBUG ## Unique users: []
2024-10-08 05:24:01,905 [ scc.git] DEBUG Get sha1 of %s
2024-10-08 05:24:01,905 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:24:01,910 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-08 05:24:01,915 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:24:01,919 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-08 05:24:01,933 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-10-08 05:24:01,933 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-10-08 05:24:01,933 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-10-08 05:24:01,933 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-10-08 05:24:01,933 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-10-08 05:24:01,933 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-10-08 05:24:01,933 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-10-08 05:24:01,933 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-10-08 05:24:01,933 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-10-08 05:24:01,951 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-08 05:24:01,955 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-10-08 05:24:01,955 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-10-08 05:24:01,955 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-10-08 05:24:01,955 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-10-08 05:24:01,955 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-10-08 05:24:01,955 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-10-08 05:24:01,955 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-10-08 05:24:01,955 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-10-08 05:24:01,955 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-10-08 05:24:01,957 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-10-08 05:24:02,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:24:02,084 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-08 05:24:02,124 [ scc.git] DEBUG Get sha1 of %s
2024-10-08 05:24:02,124 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:24:02,129 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-08 05:24:02,172 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-08 05:24:02,179 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa7e8bc1cd0> has no local changes
2024-10-08 05:24:02,179 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#194 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/194/)'
2024-10-08 05:24:02,189 [ scc.git] DEBUG [detached HEAD e9b9f00] merge master -Dorg -Ssuccess-only
2024-10-08 05:24:02,189 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-08 05:24:02,190 [ scc.repo] DEBUG ## PRs found:
2024-10-08 05:24:02,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-10-08 05:24:03,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-10-08 05:24:03,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-10-08 05:24:03,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-08 05:24:04,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-08 05:24:05,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-08 05:24:05,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-10-08 05:24:05,413 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-08 05:24:05,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-10-08 05:24:06,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-10-08 05:24:06,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-10-08 05:24:07,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-10-08 05:24:07,174 [ scc.repo] DEBUG ## Branches found:
2024-10-08 05:24:07,174 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-08 05:24:07,174 [ scc.git] DEBUG Get sha1 of %s
2024-10-08 05:24:07,174 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:24:07,179 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-08 05:24:07,184 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-08 05:24:07,184 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-08 05:24:07,188 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-08 05:24:07,193 [ scc.git] DEBUG Already up to date.
2024-10-08 05:24:07,194 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-10-08 05:24:07,696 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-10-08 05:24:07,697 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-10-08 05:24:07,702 [ scc.git] DEBUG ## Unique users: []
2024-10-08 05:24:07,702 [ scc.git] DEBUG Get sha1 of %s
2024-10-08 05:24:07,702 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:24:07,708 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-08 05:24:07,716 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:24:07,721 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-08 05:24:07,750 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-10-08 05:24:07,771 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-08 05:24:07,774 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-10-08 05:24:07,774 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-10-08 05:24:07,774 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-10-08 05:24:07,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:24:07,901 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-08 05:24:07,941 [ scc.git] DEBUG Get sha1 of %s
2024-10-08 05:24:07,942 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:24:07,946 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-08 05:24:07,993 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-08 05:24:07,999 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa7eaecbee0> has no local changes
2024-10-08 05:24:07,999 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#194 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/194/)'
2024-10-08 05:24:08,007 [ scc.git] DEBUG [detached HEAD cfec995] merge master -Dorg -Ssuccess-only
2024-10-08 05:24:08,008 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-08 05:24:08,008 [ scc.repo] DEBUG ## PRs found:
2024-10-08 05:24:08,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-10-08 05:24:09,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/431 HTTP/1.1" 200 None
2024-10-08 05:24:09,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-08 05:24:10,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-08 05:24:10,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-08 05:24:11,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-08 05:24:11,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0e500ec05bf9227b66b28a480b40e0936241d953?per_page=1 HTTP/1.1" 200 None
2024-10-08 05:24:11,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-08 05:24:12,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/status HTTP/1.1" 200 None
2024-10-08 05:24:12,329 [ scc.repo] DEBUG - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-08 05:24:12,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None
2024-10-08 05:24:13,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None
2024-10-08 05:24:13,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None
2024-10-08 05:24:13,727 [ scc.repo] DEBUG # ... Include label: include
2024-10-08 05:24:14,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-08 05:24:14,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-08 05:24:15,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-08 05:24:15,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-08 05:24:16,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1?per_page=1 HTTP/1.1" 200 None
2024-10-08 05:24:16,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-08 05:24:16,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/status HTTP/1.1" 200 None
2024-10-08 05:24:16,980 [ scc.repo] DEBUG - PR 427 Rdornier 'Add fileset folder creation'
2024-10-08 05:24:17,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-10-08 05:24:17,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-10-08 05:24:18,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-08 05:24:18,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-08 05:24:19,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-08 05:24:19,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-08 05:24:20,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-10-08 05:24:20,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-08 05:24:21,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-10-08 05:24:21,139 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-10-08 05:24:21,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-10-08 05:24:22,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-10-08 05:24:22,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-10-08 05:24:22,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-08 05:24:23,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-08 05:24:23,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-10-08 05:24:24,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-08 05:24:24,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-08 05:24:25,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-08 05:24:25,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-08 05:24:26,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-10-08 05:24:26,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-08 05:24:27,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-10-08 05:24:27,134 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-10-08 05:24:27,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-10-08 05:24:27,579 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-10-08 05:24:28,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-10-08 05:24:28,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-10-08 05:24:28,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-08 05:24:29,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-08 05:24:29,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-08 05:24:30,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-10-08 05:24:30,281 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-08 05:24:30,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-10-08 05:24:31,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-10-08 05:24:31,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-08 05:24:32,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-08 05:24:32,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-08 05:24:33,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-08 05:24:33,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-10-08 05:24:33,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-08 05:24:34,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-10-08 05:24:34,367 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-10-08 05:24:34,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-10-08 05:24:35,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-10-08 05:24:35,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-10-08 05:24:36,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-10-08 05:24:36,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-08 05:24:37,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-08 05:24:37,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-08 05:24:38,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-10-08 05:24:38,041 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-08 05:24:38,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-10-08 05:24:38,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-08 05:24:39,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-08 05:24:39,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-08 05:24:40,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-10-08 05:24:40,261 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-08 05:24:40,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-10-08 05:24:41,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-10-08 05:24:41,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-08 05:24:42,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-08 05:24:42,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-08 05:24:43,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-10-08 05:24:43,168 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-08 05:24:43,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-10-08 05:24:44,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-10-08 05:24:44,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-08 05:24:44,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-08 05:24:45,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-08 05:24:45,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-10-08 05:24:45,791 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-10-08 05:24:46,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-10-08 05:24:46,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-10-08 05:24:47,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-10-08 05:24:47,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-10-08 05:24:47,634 [ scc.repo] DEBUG ## Branches found:
2024-10-08 05:24:47,634 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-08 05:24:47,635 [ scc.git] DEBUG Get sha1 of %s
2024-10-08 05:24:47,635 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:24:47,641 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-08 05:24:47,645 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-08 05:24:47,646 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-08 05:24:47,650 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-08 05:24:47,655 [ scc.git] DEBUG Already up to date.
2024-10-08 05:24:47,656 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-10-08 05:24:48,028 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-08 05:24:48,028 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-10-08 05:24:48,034 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-10-08 05:24:48,343 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-08 05:24:48,344 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-10-08 05:24:48,348 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-10-08 05:24:48,723 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-08 05:24:48,724 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-10-08 05:24:48,729 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-10-08 05:24:49,029 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-08 05:24:49,030 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-10-08 05:24:49,036 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-10-08 05:24:49,421 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-08 05:24:49,421 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-10-08 05:24:49,427 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-10-08 05:24:49,708 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-08 05:24:49,709 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-10-08 05:24:49,713 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-10-08 05:24:50,030 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-08 05:24:50,031 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-10-08 05:24:50,036 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-10-08 05:24:50,643 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-08 05:24:50,643 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-10-08 05:24:50,649 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head'
2024-10-08 05:24:52,713 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-08 05:24:52,713 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD
2024-10-08 05:24:52,717 [ scc.git] DEBUG Calling 'git fetch origin pull/431/head'
2024-10-08 05:24:53,015 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-08 05:24:53,015 [ scc.git] DEBUG * branch refs/pull/431/head -> FETCH_HEAD
2024-10-08 05:24:53,020 [ scc.git] DEBUG ## Unique users: []
2024-10-08 05:24:53,020 [ scc.git] DEBUG Get sha1 of %s
2024-10-08 05:24:53,020 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:24:53,027 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-08 05:24:53,040 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:24:53,044 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-08 05:24:53,066 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-10-08 05:24:53,066 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-10-08 05:24:53,068 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-08 05:24:53,073 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-10-08 05:24:53,073 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-10-08 05:24:53,073 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-10-08 05:24:53,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:24:53,202 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-08 05:24:53,214 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:24:53,219 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-08 05:24:53,351 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-08 05:24:53,351 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-10-08 05:24:53,373 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-08 05:24:53,381 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-10-08 05:24:53,381 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-10-08 05:24:53,381 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-10-08 05:24:53,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:24:53,584 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-08 05:24:53,599 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:24:53,605 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-08 05:24:53,628 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-10-08 05:24:53,655 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-08 05:24:53,658 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-10-08 05:24:53,658 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-10-08 05:24:53,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:24:53,966 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-08 05:24:53,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:24:53,985 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-08 05:24:54,117 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-10-08 05:24:54,117 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-10-08 05:24:54,126 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-08 05:24:54,130 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-10-08 05:24:54,130 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-10-08 05:24:54,130 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-10-08 05:24:54,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:24:54,343 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-08 05:24:54,355 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:24:54,360 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-08 05:24:54,662 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-08 05:24:54,666 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-10-08 05:24:54,667 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-10-08 05:24:54,667 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-10-08 05:24:54,667 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-10-08 05:24:54,667 [ scc.git] DEBUG create mode 100644 connect.py
2024-10-08 05:24:54,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:24:54,798 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-08 05:24:54,814 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:24:54,819 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-08 05:24:54,839 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-10-08 05:24:54,861 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-08 05:24:54,864 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-10-08 05:24:54,864 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-10-08 05:24:55,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:24:55,181 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-10-08 05:24:55,194 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:24:55,198 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-10-08 05:24:55,235 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-10-08 05:24:55,252 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-08 05:24:55,256 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-10-08 05:24:55,257 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-10-08 05:24:55,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:24:55,562 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-08 05:24:55,576 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:24:55,585 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-08 05:24:55,692 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-08 05:24:55,694 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-08 05:24:55,704 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-10-08 05:24:55,704 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-10-08 05:24:55,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:24:55,942 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-08 05:24:55,959 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:24:55,966 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-08 05:24:56,127 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-08 05:24:56,130 [ scc.git] DEBUG .gitignore | 1 +
2024-10-08 05:24:56,130 [ scc.git] DEBUG src/omero/plugins/download.py | 17 ++++++++++++-----
2024-10-08 05:24:56,130 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 5 deletions(-)
2024-10-08 05:24:56,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:24:56,335 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-08 05:24:56,349 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:24:56,354 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 431 (omero.HdfStorage.update: add size check on data.rowNumbers) 0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-08 05:24:56,461 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-08 05:24:56,464 [ scc.git] DEBUG src/omero/hdfstorageV2.py | 1 +
2024-10-08 05:24:56,464 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2024-10-08 05:24:56,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:24:56,720 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-08 05:24:56,764 [ scc.git] DEBUG Get sha1 of %s
2024-10-08 05:24:56,764 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:24:56,770 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-08 05:24:56,809 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-08 05:24:56,816 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa7e836ef40> has no local changes
2024-10-08 05:24:56,817 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Generated by OMERO-python-superbuild-push#194 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/194/)'
2024-10-08 05:24:56,888 [ scc.git] DEBUG [detached HEAD fb37a7dc] merge master -Dorg -Ssuccess-only
2024-10-08 05:24:56,889 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-08 05:24:56,889 [ scc.git] INFO Overriding base-branch from master to develop
2024-10-08 05:24:56,889 [ scc.repo] DEBUG ## PRs found:
2024-10-08 05:24:57,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-10-08 05:24:57,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-10-08 05:24:58,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-08 05:24:58,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-08 05:24:59,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-08 05:24:59,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-08 05:25:00,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-10-08 05:25:00,232 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-08 05:25:00,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-10-08 05:25:01,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-10-08 05:25:01,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-10-08 05:25:02,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-10-08 05:25:02,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-10-08 05:25:03,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-10-08 05:25:03,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-08 05:25:04,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-08 05:25:04,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-08 05:25:05,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-10-08 05:25:05,012 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-08 05:25:05,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-10-08 05:25:05,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-10-08 05:25:06,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-10-08 05:25:06,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-10-08 05:25:06,882 [ scc.repo] DEBUG ## Branches found:
2024-10-08 05:25:06,882 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-08 05:25:06,882 [ scc.git] DEBUG Get sha1 of %s
2024-10-08 05:25:06,882 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:25:06,887 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-10-08 05:25:06,892 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-08 05:25:06,892 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-10-08 05:25:06,897 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-10-08 05:25:06,903 [ scc.git] DEBUG Already up to date.
2024-10-08 05:25:06,903 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-10-08 05:25:07,336 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-08 05:25:07,336 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-10-08 05:25:07,341 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-10-08 05:25:07,637 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-08 05:25:07,637 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-10-08 05:25:07,641 [ scc.git] DEBUG ## Unique users: []
2024-10-08 05:25:07,642 [ scc.git] DEBUG Get sha1 of %s
2024-10-08 05:25:07,642 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:25:07,646 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-08 05:25:07,653 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:25:07,657 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-08 05:25:07,812 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-10-08 05:25:07,812 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-10-08 05:25:07,812 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-10-08 05:25:07,813 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-10-08 05:25:07,819 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-08 05:25:07,825 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-08 05:25:07,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:25:07,962 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-08 05:25:07,969 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-08 05:25:07,974 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#194](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/194/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/194/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-10-08 05:25:07,977 [ scc.config] DEBUG Found github.token
2024-10-08 05:25:07,977 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-10-08 05:25:07,977 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-08 05:25:07,982 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:25:07,986 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-08 05:25:08,088 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-08 05:25:08,091 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-10-08 05:25:08,091 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-10-08 05:25:08,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:25:08,359 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-08 05:25:08,398 [ scc.git] DEBUG Get sha1 of %s
2024-10-08 05:25:08,398 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:25:08,403 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-08 05:25:08,439 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-08 05:25:08,444 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa7e8bc12e0> has no local changes
2024-10-08 05:25:08,445 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#194 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/194/)'
2024-10-08 05:25:08,451 [ scc.git] DEBUG [detached HEAD 7816933] merge master -Dorg -Ssuccess-only
2024-10-08 05:25:08,452 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-08 05:25:08,452 [ scc.repo] DEBUG ## PRs found:
2024-10-08 05:25:08,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-10-08 05:25:09,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/585 HTTP/1.1" 200 None
2024-10-08 05:25:09,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583 HTTP/1.1" 200 None
2024-10-08 05:25:10,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-08 05:25:10,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-08 05:25:11,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-08 05:25:11,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-08 05:25:12,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/aa50f469842b9687c74df8765d72241e6e37d32c?per_page=1 HTTP/1.1" 200 None
2024-10-08 05:25:12,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-08 05:25:13,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/status HTTP/1.1" 200 None
2024-10-08 05:25:13,225 [ scc.repo] DEBUG - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-08 05:25:13,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581 HTTP/1.1" 200 None
2024-10-08 05:25:14,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581/comments HTTP/1.1" 200 None
2024-10-08 05:25:14,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/580 HTTP/1.1" 200 None
2024-10-08 05:25:15,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-08 05:25:15,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-08 05:25:16,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-08 05:25:16,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-08 05:25:16,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc?per_page=1 HTTP/1.1" 200 None
2024-10-08 05:25:17,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-08 05:25:17,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/status HTTP/1.1" 200 None
2024-10-08 05:25:17,857 [ scc.repo] DEBUG - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-08 05:25:18,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568 HTTP/1.1" 200 None
2024-10-08 05:25:18,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568/comments HTTP/1.1" 200 None
2024-10-08 05:25:19,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-10-08 05:25:19,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-10-08 05:25:20,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-10-08 05:25:20,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-10-08 05:25:21,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-08 05:25:21,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-08 05:25:21,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-08 05:25:22,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-08 05:25:22,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-10-08 05:25:23,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-08 05:25:23,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-10-08 05:25:23,693 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-08 05:25:24,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-10-08 05:25:24,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-10-08 05:25:25,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-08 05:25:25,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-08 05:25:26,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-08 05:25:26,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-08 05:25:27,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-10-08 05:25:27,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-08 05:25:28,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-10-08 05:25:28,061 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-08 05:25:28,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-10-08 05:25:28,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-10-08 05:25:29,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-10-08 05:25:29,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-08 05:25:30,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-08 05:25:30,471 [ scc.repo] DEBUG ## Branches found:
2024-10-08 05:25:30,471 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-08 05:25:30,471 [ scc.git] DEBUG Get sha1 of %s
2024-10-08 05:25:30,471 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:25:30,476 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-08 05:25:30,480 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-08 05:25:30,481 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-08 05:25:30,487 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-08 05:25:30,493 [ scc.git] DEBUG Already up to date.
2024-10-08 05:25:30,493 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-10-08 05:25:31,072 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-08 05:25:31,073 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-10-08 05:25:31,078 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-10-08 05:25:31,384 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-08 05:25:31,384 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-10-08 05:25:31,389 [ scc.git] DEBUG Calling 'git fetch origin pull/580/head'
2024-10-08 05:25:31,791 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-08 05:25:31,791 [ scc.git] DEBUG * branch refs/pull/580/head -> FETCH_HEAD
2024-10-08 05:25:31,797 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head'
2024-10-08 05:25:32,133 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-08 05:25:32,133 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD
2024-10-08 05:25:32,138 [ scc.git] DEBUG ## Unique users: []
2024-10-08 05:25:32,139 [ scc.git] DEBUG Get sha1 of %s
2024-10-08 05:25:32,139 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:25:32,144 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-08 05:25:32,152 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:25:32,157 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-08 05:25:32,419 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-10-08 05:25:32,419 [ scc.git] DEBUG Auto-merging setup.py
2024-10-08 05:25:32,421 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-08 05:25:32,425 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-10-08 05:25:32,425 [ scc.git] DEBUG setup.py | 1 +
2024-10-08 05:25:32,425 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-10-08 05:25:32,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:25:32,553 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-08 05:25:32,562 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:25:32,568 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-08 05:25:32,751 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-10-08 05:25:32,752 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-10-08 05:25:32,775 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-08 05:25:32,779 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-10-08 05:25:32,779 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-10-08 05:25:32,779 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-10-08 05:25:32,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:25:32,934 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-08 05:25:32,942 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:25:32,946 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 580 (omeroweb.webgateway.obj_id_bitmask: handle empty query results) 1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-08 05:25:33,095 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-08 05:25:33,100 [ scc.git] DEBUG omeroweb/webgateway/views.py | 6 ++++++
2024-10-08 05:25:33,100 [ scc.git] DEBUG 1 file changed, 6 insertions(+)
2024-10-08 05:25:33,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:25:33,320 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-08 05:25:33,329 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:25:33,337 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Allow users to click a group name to show data from all users in that group) aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-08 05:25:33,626 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-08 05:25:33,630 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_content.html | 6 +++++-
2024-10-08 05:25:33,630 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_dropdown2.html | 2 --
2024-10-08 05:25:33,630 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 3 deletions(-)
2024-10-08 05:25:33,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:25:33,765 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-08 05:25:33,806 [ scc.git] DEBUG Get sha1 of %s
2024-10-08 05:25:33,806 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-08 05:25:33,810 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-08 05:25:33,851 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-08 05:25:33,861 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa7e82c4b20> has no local changes
2024-10-08 05:25:33,861 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
Generated by OMERO-python-superbuild-push#194 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/194/)'
2024-10-08 05:25:33,874 [ scc.git] DEBUG [detached HEAD 8669e423b] merge master -Dorg -Ssuccess-only
2024-10-08 05:25:33,874 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-08 05:25:33,874 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-08 05:25:33,932 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-10-08 05:25:34,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:25:34,213 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-10-08 05:25:34,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:25:34,606 [ scc.config] DEBUG Found submodule.omero-py.url
2024-10-08 05:25:34,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:25:34,990 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-10-08 05:25:35,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:25:35,369 [ scc.config] DEBUG Found submodule.omero-web.url
2024-10-08 05:25:35,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-08 05:25:35,767 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-08 05:25:35,798 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa7e90f5b80> has local changes
2024-10-08 05:25:35,798 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
Generated by OMERO-python-superbuild-push#194 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/194/)'
2024-10-08 05:25:35,809 [ scc.git] DEBUG [detached HEAD 2f258eb] merge master -Dorg -Ssuccess-only
2024-10-08 05:25:35,809 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-08 05:25:35,809 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-10-08 05:25:35,809 [ scc.merge] INFO Already up to date.
2024-10-08 05:25:35,809 [ scc.merge] INFO
2024-10-08 05:25:35,809 [ scc.merge] INFO Merged PRs:
2024-10-08 05:25:35,809 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-08 05:25:35,809 [ scc.merge] INFO
2024-10-08 05:25:35,810 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-10-08 05:25:35,810 [ scc.merge] INFO Already up to date.
2024-10-08 05:25:35,810 [ scc.merge] INFO
2024-10-08 05:25:35,810 [ scc.merge] INFO Merged PRs:
2024-10-08 05:25:35,810 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-08 05:25:35,810 [ scc.merge] INFO
2024-10-08 05:25:35,810 [ scc.merge] INFO Repository: ome/omero-marshal
2024-10-08 05:25:35,810 [ scc.merge] INFO Excluded PRs:
2024-10-08 05:25:35,810 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-10-08 05:25:35,810 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-10-08 05:25:35,810 [ scc.merge] INFO Already up to date.
2024-10-08 05:25:35,810 [ scc.merge] INFO
2024-10-08 05:25:35,810 [ scc.merge] INFO Merged PRs:
2024-10-08 05:25:35,810 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-08 05:25:35,810 [ scc.merge] INFO
2024-10-08 05:25:35,810 [ scc.merge] INFO Repository: ome/omero-py
2024-10-08 05:25:35,810 [ scc.merge] INFO Excluded PRs:
2024-10-08 05:25:35,810 [ scc.merge] INFO - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
2024-10-08 05:25:35,810 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-10-08 05:25:35,810 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-10-08 05:25:35,810 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-10-08 05:25:35,810 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-10-08 05:25:35,810 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-10-08 05:25:35,810 [ scc.merge] INFO Already up to date.
2024-10-08 05:25:35,810 [ scc.merge] INFO
2024-10-08 05:25:35,810 [ scc.merge] INFO Merged PRs:
2024-10-08 05:25:35,810 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-10-08 05:25:35,810 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-08 05:25:35,810 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-08 05:25:35,810 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-08 05:25:35,810 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-10-08 05:25:35,810 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-08 05:25:35,810 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-10-08 05:25:35,810 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-10-08 05:25:35,810 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation'
2024-10-08 05:25:35,810 [ scc.merge] INFO - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-08 05:25:35,810 [ scc.merge] INFO
2024-10-08 05:25:35,811 [ scc.merge] INFO Repository: ome/omero-scripts
2024-10-08 05:25:35,811 [ scc.merge] INFO Excluded PRs:
2024-10-08 05:25:35,811 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-10-08 05:25:35,811 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-10-08 05:25:35,811 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-10-08 05:25:35,811 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-10-08 05:25:35,811 [ scc.merge] INFO Already up to date.
2024-10-08 05:25:35,811 [ scc.merge] INFO
2024-10-08 05:25:35,811 [ scc.merge] INFO Merged PRs:
2024-10-08 05:25:35,811 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-08 05:25:35,811 [ scc.merge] INFO
2024-10-08 05:25:35,811 [ scc.merge] INFO Conflicting PRs (not included):
2024-10-08 05:25:35,811 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-08 05:25:35,811 [ scc.merge] INFO
2024-10-08 05:25:35,811 [ scc.merge] INFO Repository: ome/omero-web
2024-10-08 05:25:35,811 [ scc.merge] INFO Excluded PRs:
2024-10-08 05:25:35,811 [ scc.merge] INFO - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-10-08 05:25:35,811 [ scc.merge] INFO - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
2024-10-08 05:25:35,811 [ scc.merge] INFO - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
2024-10-08 05:25:35,811 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-10-08 05:25:35,811 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-10-08 05:25:35,811 [ scc.merge] INFO Already up to date.
2024-10-08 05:25:35,811 [ scc.merge] INFO
2024-10-08 05:25:35,811 [ scc.merge] INFO Merged PRs:
2024-10-08 05:25:35,811 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-08 05:25:35,811 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-08 05:25:35,811 [ scc.merge] INFO - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-08 05:25:35,811 [ scc.merge] INFO - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-08 05:25:35,811 [ scc.merge] INFO
2024-10-08 05:25:35,811 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-08 05:25:35,811 [ scc.git] DEBUG Calling 'git remote'
2024-10-08 05:25:35,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-08 05:25:35,817 [ scc.git] DEBUG Calling 'git remote'
2024-10-08 05:25:35,821 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-08 05:25:35,822 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-08 05:25:35,822 [ scc.git] DEBUG Calling 'git remote'
2024-10-08 05:25:35,826 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-08 05:25:35,826 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-08 05:25:35,826 [ scc.git] DEBUG Calling 'git remote'
2024-10-08 05:25:35,830 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-08 05:25:35,830 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-08 05:25:35,830 [ scc.git] DEBUG Calling 'git remote'
2024-10-08 05:25:35,834 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-08 05:25:35,834 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-08 05:25:35,834 [ scc.git] DEBUG Calling 'git remote'
2024-10-08 05:25:35,839 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 4fd72efa
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from da5b7d11f
nothing to commit, working tree clean
HEAD detached from e849d72
nothing to commit, working tree clean
2024-10-08 05:26:04,054 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
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