Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-10-09 00:32:34,795 [ scc.config] DEBUG Found github.token
2024-10-09 00:32:34,798 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-09 00:32:34,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:32:35,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:32:35,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-09 00:32:35,751 [ scc.gh] DEBUG 4998 remaining from 5000 (Reset at 01:10
2024-10-09 00:32:35,752 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-09 00:32:35,755 [ scc.git] DEBUG Check current status
2024-10-09 00:32:35,756 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-09 00:32:35,760 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-09 00:32:35,760 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-09 00:32:35,801 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-09 00:32:35,804 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-09 00:32:35,807 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-09 00:32:35,811 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-09 00:32:35,814 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-09 00:32:35,818 [ scc.config] DEBUG Found remote.origin.url
2024-10-09 00:32:36,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-09 00:32:36,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-09 00:32:37,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-09 00:32:37,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-09 00:32:37,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-09 00:32:37,841 [ scc.git] DEBUG Resetting...
2024-10-09 00:32:37,841 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-09 00:32:37,847 [ scc.git] DEBUG HEAD is now at e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-09 00:32:37,847 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-09 00:32:37,894 [ scc.git] DEBUG Check current status
2024-10-09 00:32:37,895 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-09 00:32:37,898 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-09 00:32:37,898 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-09 00:32:37,935 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-09 00:32:37,937 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-09 00:32:37,941 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-09 00:32:37,944 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-09 00:32:37,947 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-09 00:32:37,948 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-09 00:32:37,948 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-09 00:32:37,948 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-09 00:32:37,948 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-09 00:32:37,948 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-09 00:32:37,948 [ scc.repo] DEBUG ## PRs found:
2024-10-09 00:32:38,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-09 00:32:38,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-09 00:32:38,793 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-09 00:32:38,793 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-09 00:32:38,793 [ scc.repo] DEBUG ## Branches found:
2024-10-09 00:32:38,793 [ scc.git] DEBUG Get sha1 of %s
2024-10-09 00:32:38,793 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:32:38,799 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-09 00:32:38,803 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-09 00:32:38,803 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-09 00:32:38,807 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-09 00:32:38,812 [ scc.git] DEBUG Already up to date.
2024-10-09 00:32:38,812 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-09 00:32:39,127 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-09 00:32:39,128 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-09 00:32:39,133 [ scc.git] DEBUG ## Unique users: []
2024-10-09 00:32:39,133 [ scc.git] DEBUG Get sha1 of %s
2024-10-09 00:32:39,133 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:32:39,137 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-09 00:32:39,140 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:32:39,144 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-09 00:32:39,152 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-09 00:32:39,154 [ scc.git] DEBUG omero-py | 2 +-
2024-10-09 00:32:39,154 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-10-09 00:32:39,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:32:39,288 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-09 00:32:39,341 [ scc.git] DEBUG Submodule path 'omero-py': checked out '4fd72efaa8cdbec9da98e1d28678af16878a86ba'
2024-10-09 00:32:39,341 [ scc.git] DEBUG Get sha1 of %s
2024-10-09 00:32:39,341 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:32:39,346 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-09 00:32:39,372 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9aa2cfe310> has no local changes
2024-10-09 00:32:39,372 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Generated by OMERO-python-superbuild-push#196 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/196/)'
2024-10-09 00:32:39,395 [ scc.git] DEBUG [detached HEAD d18e585] merge master -Dorg -Snone
2024-10-09 00:32:39,395 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-09 00:32:39,395 [ scc.merge] INFO Already up to date.
2024-10-09 00:32:39,395 [ scc.merge] INFO
2024-10-09 00:32:39,395 [ scc.merge] INFO Merged PRs:
2024-10-09 00:32:39,395 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-09 00:32:39,395 [ scc.merge] INFO
2024-10-09 00:32:39,396 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-09 00:32:39,396 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-09 00:32:41,426 [ scc.config] DEBUG Found github.token
2024-10-09 00:32:41,428 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-09 00:32:41,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:32:41,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:32:42,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-09 00:32:42,348 [ scc.gh] DEBUG 4988 remaining from 5000 (Reset at 01:10
2024-10-09 00:32:42,349 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-09 00:32:42,353 [ scc.git] DEBUG Check current status
2024-10-09 00:32:42,353 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-09 00:32:42,357 [ scc.git] DEBUG d18e585 merge master -Dorg -Snone
2024-10-09 00:32:42,357 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-09 00:32:42,393 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-09 00:32:42,395 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-09 00:32:42,399 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-09 00:32:42,402 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-09 00:32:42,405 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-09 00:32:42,409 [ scc.config] DEBUG Found remote.origin.url
2024-10-09 00:32:42,410 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-10-09 00:32:42,412 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-09 00:32:42,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-09 00:32:43,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-09 00:32:43,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-09 00:32:44,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-09 00:32:44,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-09 00:32:44,482 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-09 00:32:44,528 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-09 00:32:44,528 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-09 00:32:44,532 [ scc.git] DEBUG Check current status
2024-10-09 00:32:44,532 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-09 00:32:44,536 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-10-09 00:32:44,537 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-09 00:32:44,578 [ scc.config] DEBUG Found remote.origin.url
2024-10-09 00:32:44,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-10-09 00:32:45,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-09 00:32:45,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-09 00:32:46,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-09 00:32:46,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-09 00:32:46,634 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-09 00:32:46,674 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-09 00:32:46,675 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-09 00:32:46,675 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-09 00:32:46,679 [ scc.git] DEBUG Check current status
2024-10-09 00:32:46,679 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-09 00:32:46,683 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-10-09 00:32:46,683 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-09 00:32:46,726 [ scc.config] DEBUG Found remote.origin.url
2024-10-09 00:32:47,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-10-09 00:32:47,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-09 00:32:48,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-09 00:32:48,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-09 00:32:48,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-09 00:32:48,822 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-09 00:32:48,858 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-09 00:32:48,859 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-09 00:32:48,859 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-09 00:32:48,864 [ scc.git] DEBUG Check current status
2024-10-09 00:32:48,864 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-09 00:32:48,868 [ scc.git] DEBUG 4fd72efa Bump version: 5.19.5 → 5.19.6.dev0
2024-10-09 00:32:48,868 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-09 00:32:48,908 [ scc.config] DEBUG Found remote.origin.url
2024-10-09 00:32:49,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-10-09 00:32:49,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-09 00:32:50,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-09 00:32:50,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-09 00:32:50,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-09 00:32:50,960 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-09 00:32:50,997 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-09 00:32:50,998 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-09 00:32:50,998 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-09 00:32:51,003 [ scc.git] DEBUG Check current status
2024-10-09 00:32:51,003 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-09 00:32:51,007 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-09 00:32:51,007 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-09 00:32:51,048 [ scc.config] DEBUG Found remote.origin.url
2024-10-09 00:32:51,049 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-10-09 00:32:51,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-10-09 00:32:51,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-09 00:32:52,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-09 00:32:52,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-09 00:32:53,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-09 00:32:53,087 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-09 00:32:53,125 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-09 00:32:53,127 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-09 00:32:53,127 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-09 00:32:53,131 [ scc.git] DEBUG Check current status
2024-10-09 00:32:53,131 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-09 00:32:53,136 [ scc.git] DEBUG da5b7d11f Bump version: 5.27.2 → 5.27.3.dev0
2024-10-09 00:32:53,136 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-09 00:32:53,175 [ scc.config] DEBUG Found remote.origin.url
2024-10-09 00:32:53,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-10-09 00:32:53,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-09 00:32:54,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-09 00:32:54,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-09 00:32:55,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-09 00:32:55,200 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-09 00:32:55,237 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-09 00:32:55,237 [ scc.git] DEBUG Resetting...
2024-10-09 00:32:55,237 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-09 00:32:55,244 [ scc.git] DEBUG HEAD is now at d18e585 merge master -Dorg -Snone
2024-10-09 00:32:55,245 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-09 00:32:55,297 [ scc.git] DEBUG Check current status
2024-10-09 00:32:55,297 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-09 00:32:55,301 [ scc.git] DEBUG d18e585 merge master -Dorg -Snone
2024-10-09 00:32:55,301 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-09 00:32:55,338 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-09 00:32:55,340 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-09 00:32:55,343 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-09 00:32:55,347 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-09 00:32:55,350 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-09 00:32:55,351 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-09 00:32:55,351 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-09 00:32:55,351 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-09 00:32:55,351 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-09 00:32:55,351 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-09 00:32:55,351 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-10-09 00:32:55,351 [ scc.repo] DEBUG ## PRs found:
2024-10-09 00:32:55,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-09 00:32:56,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-09 00:32:56,122 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-09 00:32:56,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-09 00:32:57,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-09 00:32:57,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-09 00:32:58,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/9660559833988d271074de56e54f2462a7be74e9?per_page=1 HTTP/1.1" 200 2
2024-10-09 00:32:58,109 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-09 00:32:58,109 [ scc.repo] DEBUG ## Branches found:
2024-10-09 00:32:58,110 [ scc.git] DEBUG Get sha1 of %s
2024-10-09 00:32:58,110 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:32:58,114 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-09 00:32:58,118 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-09 00:32:58,118 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-09 00:32:58,123 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-09 00:32:58,127 [ scc.git] DEBUG Already up to date.
2024-10-09 00:32:58,128 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-09 00:32:58,570 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-09 00:32:58,570 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-09 00:32:58,575 [ scc.git] DEBUG ## Unique users: []
2024-10-09 00:32:58,575 [ scc.git] DEBUG Get sha1 of %s
2024-10-09 00:32:58,575 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:32:58,579 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-09 00:32:58,584 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:32:58,588 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-09 00:32:58,592 [ scc.git] DEBUG Already up to date.
2024-10-09 00:32:58,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:32:58,730 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-09 00:32:58,773 [ scc.git] DEBUG Get sha1 of %s
2024-10-09 00:32:58,773 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:32:58,778 [ scc.repo] DEBUG ## PRs found:
2024-10-09 00:32:59,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-10-09 00:32:59,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-10-09 00:33:00,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-10-09 00:33:00,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-09 00:33:01,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-09 00:33:01,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-09 00:33:01,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-10-09 00:33:01,966 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-09 00:33:01,966 [ scc.repo] DEBUG ## Branches found:
2024-10-09 00:33:01,966 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-09 00:33:01,966 [ scc.git] DEBUG Get sha1 of %s
2024-10-09 00:33:01,966 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:33:01,972 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-09 00:33:01,977 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-09 00:33:01,977 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-09 00:33:01,982 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-09 00:33:01,987 [ scc.git] DEBUG Already up to date.
2024-10-09 00:33:01,988 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-10-09 00:33:02,305 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-10-09 00:33:02,306 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-10-09 00:33:02,310 [ scc.git] DEBUG ## Unique users: []
2024-10-09 00:33:02,310 [ scc.git] DEBUG Get sha1 of %s
2024-10-09 00:33:02,311 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:33:02,317 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-09 00:33:02,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:33:02,325 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-09 00:33:02,337 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-10-09 00:33:02,337 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-10-09 00:33:02,337 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-10-09 00:33:02,337 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-10-09 00:33:02,337 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-10-09 00:33:02,337 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-10-09 00:33:02,337 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-10-09 00:33:02,337 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-10-09 00:33:02,337 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-10-09 00:33:02,338 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-09 00:33:02,342 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-10-09 00:33:02,342 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-10-09 00:33:02,342 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-10-09 00:33:02,342 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-10-09 00:33:02,342 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-10-09 00:33:02,342 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-10-09 00:33:02,342 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-10-09 00:33:02,342 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-10-09 00:33:02,344 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-10-09 00:33:02,344 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-10-09 00:33:02,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:33:02,475 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-09 00:33:02,514 [ scc.git] DEBUG Get sha1 of %s
2024-10-09 00:33:02,514 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:33:02,519 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-09 00:33:02,557 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-09 00:33:02,563 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc32dac2f70> has no local changes
2024-10-09 00:33:02,563 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#196 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/196/)'
2024-10-09 00:33:02,571 [ scc.git] DEBUG [detached HEAD 0750196] merge master -Dorg -Ssuccess-only
2024-10-09 00:33:02,571 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-09 00:33:02,571 [ scc.repo] DEBUG ## PRs found:
2024-10-09 00:33:03,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-10-09 00:33:03,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-10-09 00:33:03,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-10-09 00:33:04,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-09 00:33:04,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-09 00:33:05,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-09 00:33:05,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-10-09 00:33:05,811 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-09 00:33:06,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-10-09 00:33:06,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-10-09 00:33:07,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-10-09 00:33:07,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-10-09 00:33:07,601 [ scc.repo] DEBUG ## Branches found:
2024-10-09 00:33:07,601 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-09 00:33:07,601 [ scc.git] DEBUG Get sha1 of %s
2024-10-09 00:33:07,601 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:33:07,605 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-09 00:33:07,609 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-09 00:33:07,610 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-09 00:33:07,614 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-09 00:33:07,619 [ scc.git] DEBUG Already up to date.
2024-10-09 00:33:07,619 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-10-09 00:33:07,970 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-10-09 00:33:07,971 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-10-09 00:33:07,975 [ scc.git] DEBUG ## Unique users: []
2024-10-09 00:33:07,975 [ scc.git] DEBUG Get sha1 of %s
2024-10-09 00:33:07,975 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:33:07,980 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-09 00:33:07,986 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:33:07,990 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-09 00:33:08,000 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-10-09 00:33:08,000 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-09 00:33:08,003 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-10-09 00:33:08,003 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-10-09 00:33:08,003 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-10-09 00:33:08,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:33:08,137 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-09 00:33:08,173 [ scc.git] DEBUG Get sha1 of %s
2024-10-09 00:33:08,173 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:33:08,177 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-09 00:33:08,211 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-09 00:33:08,217 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc32fdcaee0> has no local changes
2024-10-09 00:33:08,217 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#196 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/196/)'
2024-10-09 00:33:08,224 [ scc.git] DEBUG [detached HEAD ddba9b1] merge master -Dorg -Ssuccess-only
2024-10-09 00:33:08,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-09 00:33:08,224 [ scc.repo] DEBUG ## PRs found:
2024-10-09 00:33:08,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-10-09 00:33:09,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/431 HTTP/1.1" 200 None
2024-10-09 00:33:09,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-09 00:33:10,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-09 00:33:10,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-09 00:33:11,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-09 00:33:11,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0e500ec05bf9227b66b28a480b40e0936241d953?per_page=1 HTTP/1.1" 200 None
2024-10-09 00:33:12,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-09 00:33:12,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/status HTTP/1.1" 200 None
2024-10-09 00:33:12,519 [ scc.repo] DEBUG - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-09 00:33:12,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None
2024-10-09 00:33:13,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None
2024-10-09 00:33:13,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None
2024-10-09 00:33:13,913 [ scc.repo] DEBUG # ... Include label: include
2024-10-09 00:33:14,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-09 00:33:14,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-09 00:33:15,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-09 00:33:15,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-09 00:33:16,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1?per_page=1 HTTP/1.1" 200 None
2024-10-09 00:33:16,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-09 00:33:17,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/status HTTP/1.1" 200 None
2024-10-09 00:33:17,047 [ scc.repo] DEBUG - PR 427 Rdornier 'Add fileset folder creation'
2024-10-09 00:33:17,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-10-09 00:33:17,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-10-09 00:33:18,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-09 00:33:18,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-09 00:33:19,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-09 00:33:19,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-09 00:33:20,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-10-09 00:33:20,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-09 00:33:21,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-10-09 00:33:21,137 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-10-09 00:33:21,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-10-09 00:33:22,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-10-09 00:33:22,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-10-09 00:33:22,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-09 00:33:23,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-09 00:33:23,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-10-09 00:33:24,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-09 00:33:24,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-09 00:33:25,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-09 00:33:25,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-09 00:33:26,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-10-09 00:33:26,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-09 00:33:27,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-10-09 00:33:27,079 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-10-09 00:33:27,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-10-09 00:33:27,535 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-10-09 00:33:27,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-10-09 00:33:28,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-10-09 00:33:28,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-09 00:33:29,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-09 00:33:29,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-09 00:33:30,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-10-09 00:33:30,272 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-09 00:33:30,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-10-09 00:33:31,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-10-09 00:33:31,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-09 00:33:32,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-09 00:33:32,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-09 00:33:33,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-09 00:33:33,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-10-09 00:33:33,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-09 00:33:34,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-10-09 00:33:34,230 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-10-09 00:33:34,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-10-09 00:33:35,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-10-09 00:33:35,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-10-09 00:33:36,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-10-09 00:33:36,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-09 00:33:36,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-09 00:33:37,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-09 00:33:37,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-10-09 00:33:37,840 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-09 00:33:38,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-10-09 00:33:38,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-09 00:33:39,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-09 00:33:39,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-09 00:33:40,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-10-09 00:33:40,152 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-09 00:33:40,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-10-09 00:33:41,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-10-09 00:33:41,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-09 00:33:42,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-09 00:33:42,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-09 00:33:42,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-10-09 00:33:42,968 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-09 00:33:43,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-10-09 00:33:43,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-10-09 00:33:44,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-09 00:33:44,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-09 00:33:45,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-09 00:33:45,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-10-09 00:33:45,737 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-10-09 00:33:46,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-10-09 00:33:46,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-10-09 00:33:47,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-10-09 00:33:47,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-10-09 00:33:47,526 [ scc.repo] DEBUG ## Branches found:
2024-10-09 00:33:47,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-09 00:33:47,526 [ scc.git] DEBUG Get sha1 of %s
2024-10-09 00:33:47,526 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:33:47,532 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-09 00:33:47,536 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-09 00:33:47,536 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-09 00:33:47,540 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-09 00:33:47,544 [ scc.git] DEBUG Already up to date.
2024-10-09 00:33:47,544 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-10-09 00:33:47,870 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-09 00:33:47,870 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-10-09 00:33:47,875 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-10-09 00:33:48,187 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-09 00:33:48,187 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-10-09 00:33:48,192 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-10-09 00:33:48,509 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-09 00:33:48,509 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-10-09 00:33:48,513 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-10-09 00:33:48,805 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-09 00:33:48,805 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-10-09 00:33:48,810 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-10-09 00:33:49,102 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-09 00:33:49,102 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-10-09 00:33:49,107 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-10-09 00:33:49,392 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-09 00:33:49,393 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-10-09 00:33:49,399 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-10-09 00:33:49,690 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-09 00:33:49,690 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-10-09 00:33:49,696 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-10-09 00:33:49,973 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-09 00:33:49,973 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-10-09 00:33:49,978 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head'
2024-10-09 00:33:50,267 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-09 00:33:50,267 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD
2024-10-09 00:33:50,273 [ scc.git] DEBUG Calling 'git fetch origin pull/431/head'
2024-10-09 00:33:50,556 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-09 00:33:50,557 [ scc.git] DEBUG * branch refs/pull/431/head -> FETCH_HEAD
2024-10-09 00:33:50,561 [ scc.git] DEBUG ## Unique users: []
2024-10-09 00:33:50,561 [ scc.git] DEBUG Get sha1 of %s
2024-10-09 00:33:50,562 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:33:50,566 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-09 00:33:50,577 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:33:50,580 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-09 00:33:50,601 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-10-09 00:33:50,601 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-10-09 00:33:50,601 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-09 00:33:50,605 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-10-09 00:33:50,605 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-10-09 00:33:50,605 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-10-09 00:33:50,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:33:50,732 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-09 00:33:50,743 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:33:50,747 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-09 00:33:50,794 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-09 00:33:50,795 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-10-09 00:33:50,795 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-09 00:33:50,802 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-10-09 00:33:50,802 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-10-09 00:33:50,802 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-10-09 00:33:51,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:33:51,119 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-09 00:33:51,130 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:33:51,134 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-09 00:33:51,152 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-10-09 00:33:51,153 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-09 00:33:51,156 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-10-09 00:33:51,156 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-10-09 00:33:51,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:33:51,528 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-09 00:33:51,540 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:33:51,544 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-09 00:33:51,562 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-10-09 00:33:51,562 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-10-09 00:33:51,563 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-09 00:33:51,566 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-10-09 00:33:51,566 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-10-09 00:33:51,566 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-10-09 00:33:51,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:33:51,917 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-09 00:33:51,929 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:33:51,932 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-09 00:33:51,953 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-09 00:33:51,956 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-10-09 00:33:51,956 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-10-09 00:33:51,956 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-10-09 00:33:51,956 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-10-09 00:33:51,956 [ scc.git] DEBUG create mode 100644 connect.py
2024-10-09 00:33:52,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:33:52,312 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-09 00:33:52,324 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:33:52,328 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-09 00:33:52,346 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-10-09 00:33:52,347 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-09 00:33:52,349 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-10-09 00:33:52,349 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-10-09 00:33:52,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:33:52,697 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-10-09 00:33:52,709 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:33:52,713 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-10-09 00:33:52,732 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-10-09 00:33:52,733 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-09 00:33:52,736 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-10-09 00:33:52,736 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-10-09 00:33:53,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:33:53,113 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-09 00:33:53,125 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:33:53,129 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-09 00:33:53,162 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-09 00:33:53,163 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-09 00:33:53,170 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-10-09 00:33:53,170 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-10-09 00:33:53,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:33:53,493 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-09 00:33:53,505 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:33:53,509 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-09 00:33:53,529 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-09 00:33:53,532 [ scc.git] DEBUG .gitignore | 1 +
2024-10-09 00:33:53,532 [ scc.git] DEBUG src/omero/plugins/download.py | 17 ++++++++++++-----
2024-10-09 00:33:53,532 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 5 deletions(-)
2024-10-09 00:33:53,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:33:53,868 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-09 00:33:53,879 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:33:53,884 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 431 (omero.HdfStorage.update: add size check on data.rowNumbers) 0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-09 00:33:53,906 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-09 00:33:53,908 [ scc.git] DEBUG src/omero/hdfstorageV2.py | 1 +
2024-10-09 00:33:53,908 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2024-10-09 00:33:54,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:33:54,263 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-09 00:33:54,306 [ scc.git] DEBUG Get sha1 of %s
2024-10-09 00:33:54,306 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:33:54,311 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-09 00:33:54,350 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-09 00:33:54,359 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc32ca6bf10> has no local changes
2024-10-09 00:33:54,360 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Generated by OMERO-python-superbuild-push#196 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/196/)'
2024-10-09 00:33:54,369 [ scc.git] DEBUG [detached HEAD 950d3513] merge master -Dorg -Ssuccess-only
2024-10-09 00:33:54,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-09 00:33:54,370 [ scc.git] INFO Overriding base-branch from master to develop
2024-10-09 00:33:54,370 [ scc.repo] DEBUG ## PRs found:
2024-10-09 00:33:54,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-10-09 00:33:55,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-10-09 00:33:55,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-09 00:33:56,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-09 00:33:56,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-09 00:33:57,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-09 00:33:57,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-10-09 00:33:57,617 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-09 00:33:58,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-10-09 00:33:58,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-10-09 00:33:59,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-10-09 00:33:59,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-10-09 00:33:59,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-10-09 00:34:00,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-10-09 00:34:00,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-09 00:34:01,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-09 00:34:01,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-09 00:34:02,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-10-09 00:34:02,175 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-09 00:34:02,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-10-09 00:34:03,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-10-09 00:34:03,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-10-09 00:34:04,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-10-09 00:34:04,037 [ scc.repo] DEBUG ## Branches found:
2024-10-09 00:34:04,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-09 00:34:04,038 [ scc.git] DEBUG Get sha1 of %s
2024-10-09 00:34:04,038 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:34:04,043 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-10-09 00:34:04,048 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-09 00:34:04,048 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-10-09 00:34:04,053 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-10-09 00:34:04,058 [ scc.git] DEBUG Already up to date.
2024-10-09 00:34:04,058 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-10-09 00:34:04,378 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-09 00:34:04,378 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-10-09 00:34:04,383 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-10-09 00:34:04,702 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-09 00:34:04,702 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-10-09 00:34:04,707 [ scc.git] DEBUG ## Unique users: []
2024-10-09 00:34:04,707 [ scc.git] DEBUG Get sha1 of %s
2024-10-09 00:34:04,707 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:34:04,711 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-09 00:34:04,718 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:34:04,722 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-09 00:34:04,733 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-10-09 00:34:04,733 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-10-09 00:34:04,733 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-10-09 00:34:04,734 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-10-09 00:34:04,739 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-09 00:34:04,745 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-09 00:34:04,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:34:04,875 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-09 00:34:04,882 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-09 00:34:04,886 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#196](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/196/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/196/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-10-09 00:34:04,890 [ scc.config] DEBUG Found github.token
2024-10-09 00:34:04,890 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-10-09 00:34:04,890 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-09 00:34:04,894 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:34:04,897 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-09 00:34:04,905 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-09 00:34:04,908 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-10-09 00:34:04,908 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-10-09 00:34:05,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:34:05,262 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-09 00:34:05,298 [ scc.git] DEBUG Get sha1 of %s
2024-10-09 00:34:05,298 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:34:05,302 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-09 00:34:05,338 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-09 00:34:05,344 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc32dac2220> has no local changes
2024-10-09 00:34:05,344 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#196 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/196/)'
2024-10-09 00:34:05,351 [ scc.git] DEBUG [detached HEAD 57b14f3] merge master -Dorg -Ssuccess-only
2024-10-09 00:34:05,352 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-09 00:34:05,352 [ scc.repo] DEBUG ## PRs found:
2024-10-09 00:34:05,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-10-09 00:34:06,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/585 HTTP/1.1" 200 None
2024-10-09 00:34:06,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583 HTTP/1.1" 200 None
2024-10-09 00:34:07,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-09 00:34:07,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-09 00:34:08,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-09 00:34:08,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-09 00:34:09,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/aa50f469842b9687c74df8765d72241e6e37d32c?per_page=1 HTTP/1.1" 200 None
2024-10-09 00:34:09,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-09 00:34:10,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/status HTTP/1.1" 200 None
2024-10-09 00:34:10,163 [ scc.repo] DEBUG - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-09 00:34:10,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581 HTTP/1.1" 200 None
2024-10-09 00:34:11,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581/comments HTTP/1.1" 200 None
2024-10-09 00:34:11,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/580 HTTP/1.1" 200 None
2024-10-09 00:34:12,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-09 00:34:12,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-09 00:34:13,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-09 00:34:13,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-09 00:34:13,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc?per_page=1 HTTP/1.1" 200 None
2024-10-09 00:34:14,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-09 00:34:14,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/status HTTP/1.1" 200 None
2024-10-09 00:34:14,912 [ scc.repo] DEBUG - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-09 00:34:15,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568 HTTP/1.1" 200 None
2024-10-09 00:34:15,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568/comments HTTP/1.1" 200 None
2024-10-09 00:34:16,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-10-09 00:34:16,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-10-09 00:34:17,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-10-09 00:34:17,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-10-09 00:34:18,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-09 00:34:18,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-09 00:34:19,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-09 00:34:19,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-09 00:34:20,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-10-09 00:34:20,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-09 00:34:20,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-10-09 00:34:20,982 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-09 00:34:21,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-10-09 00:34:21,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-10-09 00:34:22,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-09 00:34:22,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-09 00:34:23,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-09 00:34:23,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-09 00:34:24,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-10-09 00:34:24,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-09 00:34:25,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-10-09 00:34:25,241 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-09 00:34:25,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-10-09 00:34:26,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-10-09 00:34:26,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-10-09 00:34:27,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-09 00:34:27,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-09 00:34:27,662 [ scc.repo] DEBUG ## Branches found:
2024-10-09 00:34:27,662 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-09 00:34:27,662 [ scc.git] DEBUG Get sha1 of %s
2024-10-09 00:34:27,662 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:34:27,668 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-09 00:34:27,672 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-09 00:34:27,672 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-09 00:34:27,677 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-09 00:34:27,681 [ scc.git] DEBUG Already up to date.
2024-10-09 00:34:27,681 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-10-09 00:34:28,003 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-09 00:34:28,003 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-10-09 00:34:28,007 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-10-09 00:34:28,311 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-09 00:34:28,311 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-10-09 00:34:28,315 [ scc.git] DEBUG Calling 'git fetch origin pull/580/head'
2024-10-09 00:34:28,610 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-09 00:34:28,611 [ scc.git] DEBUG * branch refs/pull/580/head -> FETCH_HEAD
2024-10-09 00:34:28,615 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head'
2024-10-09 00:34:28,909 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-09 00:34:28,910 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD
2024-10-09 00:34:28,914 [ scc.git] DEBUG ## Unique users: []
2024-10-09 00:34:28,914 [ scc.git] DEBUG Get sha1 of %s
2024-10-09 00:34:28,914 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:34:28,919 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-09 00:34:28,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:34:28,929 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-09 00:34:28,946 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-10-09 00:34:28,946 [ scc.git] DEBUG Auto-merging setup.py
2024-10-09 00:34:28,947 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-09 00:34:28,951 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-10-09 00:34:28,951 [ scc.git] DEBUG setup.py | 1 +
2024-10-09 00:34:28,951 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-10-09 00:34:29,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:34:29,093 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-09 00:34:29,102 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:34:29,107 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-09 00:34:29,128 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-10-09 00:34:29,129 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-10-09 00:34:29,130 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-09 00:34:29,133 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-10-09 00:34:29,133 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-10-09 00:34:29,133 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-10-09 00:34:29,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:34:29,475 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-09 00:34:29,483 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:34:29,489 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 580 (omeroweb.webgateway.obj_id_bitmask: handle empty query results) 1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-09 00:34:29,509 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-09 00:34:29,513 [ scc.git] DEBUG omeroweb/webgateway/views.py | 6 ++++++
2024-10-09 00:34:29,513 [ scc.git] DEBUG 1 file changed, 6 insertions(+)
2024-10-09 00:34:29,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:34:29,889 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-09 00:34:29,896 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:34:29,900 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Allow users to click a group name to show data from all users in that group) aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-09 00:34:29,918 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-09 00:34:29,921 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_content.html | 6 +++++-
2024-10-09 00:34:29,921 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_dropdown2.html | 2 --
2024-10-09 00:34:29,921 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 3 deletions(-)
2024-10-09 00:34:30,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:34:30,281 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-09 00:34:30,322 [ scc.git] DEBUG Get sha1 of %s
2024-10-09 00:34:30,322 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-09 00:34:30,327 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-09 00:34:30,366 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-09 00:34:30,377 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc32c1c3fd0> has no local changes
2024-10-09 00:34:30,378 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
Generated by OMERO-python-superbuild-push#196 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/196/)'
2024-10-09 00:34:30,388 [ scc.git] DEBUG [detached HEAD 409e44697] merge master -Dorg -Ssuccess-only
2024-10-09 00:34:30,388 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-09 00:34:30,389 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-09 00:34:30,438 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-10-09 00:34:30,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:34:30,670 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-10-09 00:34:31,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:34:31,047 [ scc.config] DEBUG Found submodule.omero-py.url
2024-10-09 00:34:31,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:34:31,436 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-10-09 00:34:31,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:34:31,819 [ scc.config] DEBUG Found submodule.omero-web.url
2024-10-09 00:34:32,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-09 00:34:32,204 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-09 00:34:32,233 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc32dd6bb80> has local changes
2024-10-09 00:34:32,233 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
Generated by OMERO-python-superbuild-push#196 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/196/)'
2024-10-09 00:34:32,242 [ scc.git] DEBUG [detached HEAD 6826e18] merge master -Dorg -Ssuccess-only
2024-10-09 00:34:32,243 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-09 00:34:32,243 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-10-09 00:34:32,243 [ scc.merge] INFO Already up to date.
2024-10-09 00:34:32,243 [ scc.merge] INFO
2024-10-09 00:34:32,243 [ scc.merge] INFO Merged PRs:
2024-10-09 00:34:32,243 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-09 00:34:32,243 [ scc.merge] INFO
2024-10-09 00:34:32,243 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-10-09 00:34:32,243 [ scc.merge] INFO Already up to date.
2024-10-09 00:34:32,243 [ scc.merge] INFO
2024-10-09 00:34:32,243 [ scc.merge] INFO Merged PRs:
2024-10-09 00:34:32,243 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-09 00:34:32,243 [ scc.merge] INFO
2024-10-09 00:34:32,243 [ scc.merge] INFO Repository: ome/omero-marshal
2024-10-09 00:34:32,243 [ scc.merge] INFO Excluded PRs:
2024-10-09 00:34:32,244 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-10-09 00:34:32,244 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-10-09 00:34:32,244 [ scc.merge] INFO Already up to date.
2024-10-09 00:34:32,244 [ scc.merge] INFO
2024-10-09 00:34:32,244 [ scc.merge] INFO Merged PRs:
2024-10-09 00:34:32,244 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-09 00:34:32,244 [ scc.merge] INFO
2024-10-09 00:34:32,244 [ scc.merge] INFO Repository: ome/omero-py
2024-10-09 00:34:32,244 [ scc.merge] INFO Excluded PRs:
2024-10-09 00:34:32,244 [ scc.merge] INFO - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
2024-10-09 00:34:32,244 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-10-09 00:34:32,244 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-10-09 00:34:32,244 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-10-09 00:34:32,244 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-10-09 00:34:32,244 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-10-09 00:34:32,244 [ scc.merge] INFO Already up to date.
2024-10-09 00:34:32,244 [ scc.merge] INFO
2024-10-09 00:34:32,244 [ scc.merge] INFO Merged PRs:
2024-10-09 00:34:32,244 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-10-09 00:34:32,244 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-09 00:34:32,244 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-09 00:34:32,244 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-09 00:34:32,244 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-10-09 00:34:32,244 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-09 00:34:32,244 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-10-09 00:34:32,244 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-10-09 00:34:32,244 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation'
2024-10-09 00:34:32,244 [ scc.merge] INFO - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-09 00:34:32,244 [ scc.merge] INFO
2024-10-09 00:34:32,244 [ scc.merge] INFO Repository: ome/omero-scripts
2024-10-09 00:34:32,244 [ scc.merge] INFO Excluded PRs:
2024-10-09 00:34:32,244 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-10-09 00:34:32,244 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-10-09 00:34:32,245 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-10-09 00:34:32,245 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-10-09 00:34:32,245 [ scc.merge] INFO Already up to date.
2024-10-09 00:34:32,245 [ scc.merge] INFO
2024-10-09 00:34:32,245 [ scc.merge] INFO Merged PRs:
2024-10-09 00:34:32,245 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-09 00:34:32,245 [ scc.merge] INFO
2024-10-09 00:34:32,245 [ scc.merge] INFO Conflicting PRs (not included):
2024-10-09 00:34:32,245 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-09 00:34:32,245 [ scc.merge] INFO
2024-10-09 00:34:32,245 [ scc.merge] INFO Repository: ome/omero-web
2024-10-09 00:34:32,245 [ scc.merge] INFO Excluded PRs:
2024-10-09 00:34:32,245 [ scc.merge] INFO - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-10-09 00:34:32,245 [ scc.merge] INFO - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
2024-10-09 00:34:32,245 [ scc.merge] INFO - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
2024-10-09 00:34:32,245 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-10-09 00:34:32,245 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-10-09 00:34:32,245 [ scc.merge] INFO Already up to date.
2024-10-09 00:34:32,245 [ scc.merge] INFO
2024-10-09 00:34:32,245 [ scc.merge] INFO Merged PRs:
2024-10-09 00:34:32,245 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-09 00:34:32,245 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-09 00:34:32,245 [ scc.merge] INFO - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-09 00:34:32,245 [ scc.merge] INFO - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-09 00:34:32,245 [ scc.merge] INFO
2024-10-09 00:34:32,245 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-09 00:34:32,245 [ scc.git] DEBUG Calling 'git remote'
2024-10-09 00:34:32,250 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-09 00:34:32,250 [ scc.git] DEBUG Calling 'git remote'
2024-10-09 00:34:32,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-09 00:34:32,255 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-09 00:34:32,255 [ scc.git] DEBUG Calling 'git remote'
2024-10-09 00:34:32,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-09 00:34:32,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-09 00:34:32,259 [ scc.git] DEBUG Calling 'git remote'
2024-10-09 00:34:32,263 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-09 00:34:32,263 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-09 00:34:32,263 [ scc.git] DEBUG Calling 'git remote'
2024-10-09 00:34:32,268 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-09 00:34:32,268 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-09 00:34:32,268 [ scc.git] DEBUG Calling 'git remote'
2024-10-09 00:34:32,272 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 4fd72efa
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from da5b7d11f
nothing to commit, working tree clean
HEAD detached from e849d72
nothing to commit, working tree clean
2024-10-09 00:35:02,012 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
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