Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-10-11 00:48:09,168 [ scc.config] DEBUG Found github.token
2024-10-11 00:48:09,171 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-11 00:48:09,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:48:09,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:48:10,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-11 00:48:10,124 [ scc.gh] DEBUG 3963 remaining from 5000 (Reset at 00:10
2024-10-11 00:48:10,125 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-11 00:48:10,129 [ scc.git] DEBUG Check current status
2024-10-11 00:48:10,129 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-11 00:48:10,133 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-11 00:48:10,133 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-11 00:48:10,179 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-11 00:48:10,181 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-11 00:48:10,185 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-11 00:48:10,189 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-11 00:48:10,192 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-11 00:48:10,197 [ scc.config] DEBUG Found remote.origin.url
2024-10-11 00:48:10,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-11 00:48:11,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-11 00:48:11,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-11 00:48:11,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-11 00:48:12,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-11 00:48:12,215 [ scc.git] DEBUG Resetting...
2024-10-11 00:48:12,215 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-11 00:48:12,221 [ scc.git] DEBUG HEAD is now at e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-11 00:48:12,221 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-11 00:48:12,270 [ scc.git] DEBUG Check current status
2024-10-11 00:48:12,271 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-11 00:48:12,274 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-11 00:48:12,274 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-11 00:48:12,311 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-11 00:48:12,314 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-11 00:48:12,317 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-11 00:48:12,321 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-11 00:48:12,324 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-11 00:48:12,325 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-11 00:48:12,325 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-11 00:48:12,325 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-11 00:48:12,325 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-11 00:48:12,325 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-11 00:48:12,325 [ scc.repo] DEBUG ## PRs found:
2024-10-11 00:48:12,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-11 00:48:13,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-11 00:48:13,160 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-11 00:48:13,161 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-11 00:48:13,161 [ scc.repo] DEBUG ## Branches found:
2024-10-11 00:48:13,161 [ scc.git] DEBUG Get sha1 of %s
2024-10-11 00:48:13,161 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:48:13,165 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-11 00:48:13,168 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-11 00:48:13,168 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-11 00:48:13,171 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-11 00:48:13,175 [ scc.git] DEBUG Already up to date.
2024-10-11 00:48:13,175 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-11 00:48:13,478 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-11 00:48:13,478 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-11 00:48:13,482 [ scc.git] DEBUG ## Unique users: []
2024-10-11 00:48:13,482 [ scc.git] DEBUG Get sha1 of %s
2024-10-11 00:48:13,482 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:48:13,485 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-11 00:48:13,490 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:48:13,493 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-11 00:48:13,503 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-11 00:48:13,505 [ scc.git] DEBUG omero-py | 2 +-
2024-10-11 00:48:13,505 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-10-11 00:48:13,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:48:13,634 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-11 00:48:13,884 [ scc.git] DEBUG Submodule path 'omero-py': checked out '4fd72efaa8cdbec9da98e1d28678af16878a86ba'
2024-10-11 00:48:13,885 [ scc.git] DEBUG Get sha1 of %s
2024-10-11 00:48:13,885 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:48:13,889 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-11 00:48:14,146 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbd1212b8b0> has no local changes
2024-10-11 00:48:14,146 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Generated by OMERO-python-superbuild-push#198 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/198/)'
2024-10-11 00:48:14,169 [ scc.git] DEBUG [detached HEAD 31357c2] merge master -Dorg -Snone
2024-10-11 00:48:14,169 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-11 00:48:14,170 [ scc.merge] INFO Already up to date.
2024-10-11 00:48:14,170 [ scc.merge] INFO
2024-10-11 00:48:14,170 [ scc.merge] INFO Merged PRs:
2024-10-11 00:48:14,170 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-11 00:48:14,170 [ scc.merge] INFO
2024-10-11 00:48:14,170 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-11 00:48:14,170 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-11 00:48:16,366 [ scc.config] DEBUG Found github.token
2024-10-11 00:48:16,369 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-11 00:48:16,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:48:16,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:48:17,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-11 00:48:17,271 [ scc.gh] DEBUG 3953 remaining from 5000 (Reset at 00:10
2024-10-11 00:48:17,272 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-11 00:48:17,276 [ scc.git] DEBUG Check current status
2024-10-11 00:48:17,276 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-11 00:48:17,279 [ scc.git] DEBUG 31357c2 merge master -Dorg -Snone
2024-10-11 00:48:17,280 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-11 00:48:17,316 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-11 00:48:17,319 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-11 00:48:17,323 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-11 00:48:17,326 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-11 00:48:17,330 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-11 00:48:17,333 [ scc.config] DEBUG Found remote.origin.url
2024-10-11 00:48:17,333 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-10-11 00:48:17,335 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-11 00:48:17,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-11 00:48:18,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-11 00:48:18,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-11 00:48:18,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-11 00:48:19,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-11 00:48:19,381 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-11 00:48:19,424 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-11 00:48:19,424 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-11 00:48:19,427 [ scc.git] DEBUG Check current status
2024-10-11 00:48:19,427 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-11 00:48:19,430 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-10-11 00:48:19,430 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-11 00:48:19,467 [ scc.config] DEBUG Found remote.origin.url
2024-10-11 00:48:19,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-10-11 00:48:20,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-11 00:48:20,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-11 00:48:21,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-11 00:48:21,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-11 00:48:21,490 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-11 00:48:21,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-11 00:48:21,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-11 00:48:21,526 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-11 00:48:21,529 [ scc.git] DEBUG Check current status
2024-10-11 00:48:21,529 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-11 00:48:21,533 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-10-11 00:48:21,533 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-11 00:48:21,570 [ scc.config] DEBUG Found remote.origin.url
2024-10-11 00:48:21,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-10-11 00:48:22,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-11 00:48:22,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-11 00:48:23,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-11 00:48:23,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-11 00:48:23,579 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-11 00:48:23,615 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-11 00:48:23,615 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-11 00:48:23,615 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-11 00:48:23,619 [ scc.git] DEBUG Check current status
2024-10-11 00:48:23,619 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-11 00:48:23,623 [ scc.git] DEBUG 4fd72efa Bump version: 5.19.5 → 5.19.6.dev0
2024-10-11 00:48:23,623 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-11 00:48:23,661 [ scc.config] DEBUG Found remote.origin.url
2024-10-11 00:48:24,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-10-11 00:48:24,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-11 00:48:24,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-11 00:48:25,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-11 00:48:25,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-11 00:48:25,706 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-11 00:48:25,744 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-11 00:48:25,745 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-11 00:48:25,745 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-11 00:48:25,749 [ scc.git] DEBUG Check current status
2024-10-11 00:48:25,749 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-11 00:48:25,769 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-11 00:48:25,770 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-11 00:48:25,812 [ scc.config] DEBUG Found remote.origin.url
2024-10-11 00:48:25,812 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-10-11 00:48:26,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-10-11 00:48:26,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-11 00:48:27,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-11 00:48:27,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-11 00:48:27,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-11 00:48:27,864 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-11 00:48:27,900 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-11 00:48:27,902 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-11 00:48:27,902 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-11 00:48:27,906 [ scc.git] DEBUG Check current status
2024-10-11 00:48:27,907 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-11 00:48:27,925 [ scc.git] DEBUG da5b7d11f Bump version: 5.27.2 → 5.27.3.dev0
2024-10-11 00:48:27,925 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-11 00:48:27,964 [ scc.config] DEBUG Found remote.origin.url
2024-10-11 00:48:28,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-10-11 00:48:28,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-11 00:48:29,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-11 00:48:29,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-11 00:48:29,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-11 00:48:29,938 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-11 00:48:29,972 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-11 00:48:29,972 [ scc.git] DEBUG Resetting...
2024-10-11 00:48:29,973 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-11 00:48:29,977 [ scc.git] DEBUG HEAD is now at 31357c2 merge master -Dorg -Snone
2024-10-11 00:48:29,978 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-11 00:48:30,024 [ scc.git] DEBUG Check current status
2024-10-11 00:48:30,025 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-11 00:48:30,028 [ scc.git] DEBUG 31357c2 merge master -Dorg -Snone
2024-10-11 00:48:30,028 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-11 00:48:30,063 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-11 00:48:30,065 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-11 00:48:30,069 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-11 00:48:30,072 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-11 00:48:30,075 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-11 00:48:30,076 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-11 00:48:30,076 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-11 00:48:30,076 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-11 00:48:30,076 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-11 00:48:30,076 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-11 00:48:30,076 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-10-11 00:48:30,076 [ scc.repo] DEBUG ## PRs found:
2024-10-11 00:48:30,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-11 00:48:30,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-11 00:48:30,857 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-11 00:48:31,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-11 00:48:31,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-11 00:48:32,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-11 00:48:32,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/9660559833988d271074de56e54f2462a7be74e9?per_page=1 HTTP/1.1" 200 2
2024-10-11 00:48:32,869 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-11 00:48:32,869 [ scc.repo] DEBUG ## Branches found:
2024-10-11 00:48:32,869 [ scc.git] DEBUG Get sha1 of %s
2024-10-11 00:48:32,869 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:48:32,873 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-11 00:48:32,877 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-11 00:48:32,877 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-11 00:48:32,880 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-11 00:48:32,884 [ scc.git] DEBUG Already up to date.
2024-10-11 00:48:32,884 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-11 00:48:33,227 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-11 00:48:33,227 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-11 00:48:33,232 [ scc.git] DEBUG ## Unique users: []
2024-10-11 00:48:33,232 [ scc.git] DEBUG Get sha1 of %s
2024-10-11 00:48:33,232 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:48:33,236 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-11 00:48:33,240 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:48:33,243 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-11 00:48:33,247 [ scc.git] DEBUG Already up to date.
2024-10-11 00:48:33,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:48:33,383 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-11 00:48:33,420 [ scc.git] DEBUG Get sha1 of %s
2024-10-11 00:48:33,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:48:33,424 [ scc.repo] DEBUG ## PRs found:
2024-10-11 00:48:33,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-10-11 00:48:34,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-10-11 00:48:34,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-10-11 00:48:35,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-11 00:48:35,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-11 00:48:36,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-11 00:48:36,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-10-11 00:48:36,743 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-11 00:48:36,743 [ scc.repo] DEBUG ## Branches found:
2024-10-11 00:48:36,743 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-11 00:48:36,743 [ scc.git] DEBUG Get sha1 of %s
2024-10-11 00:48:36,743 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:48:36,748 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-11 00:48:36,751 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-11 00:48:36,751 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-11 00:48:36,755 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-11 00:48:36,759 [ scc.git] DEBUG Already up to date.
2024-10-11 00:48:36,760 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-10-11 00:48:37,133 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-10-11 00:48:37,133 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-10-11 00:48:37,137 [ scc.git] DEBUG ## Unique users: []
2024-10-11 00:48:37,137 [ scc.git] DEBUG Get sha1 of %s
2024-10-11 00:48:37,137 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:48:37,141 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-11 00:48:37,145 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:48:37,149 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-11 00:48:37,161 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-10-11 00:48:37,161 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-10-11 00:48:37,161 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-10-11 00:48:37,161 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-10-11 00:48:37,161 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-10-11 00:48:37,161 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-10-11 00:48:37,161 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-10-11 00:48:37,161 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-10-11 00:48:37,161 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-10-11 00:48:37,162 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-11 00:48:37,165 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-10-11 00:48:37,165 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-10-11 00:48:37,165 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-10-11 00:48:37,165 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-10-11 00:48:37,165 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-10-11 00:48:37,165 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-10-11 00:48:37,165 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-10-11 00:48:37,167 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-10-11 00:48:37,167 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-10-11 00:48:37,167 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-10-11 00:48:37,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:48:37,294 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-11 00:48:37,329 [ scc.git] DEBUG Get sha1 of %s
2024-10-11 00:48:37,329 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:48:37,333 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-11 00:48:37,369 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-11 00:48:37,375 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe5dd418e20> has no local changes
2024-10-11 00:48:37,375 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#198 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/198/)'
2024-10-11 00:48:37,382 [ scc.git] DEBUG [detached HEAD 48ebc38] merge master -Dorg -Ssuccess-only
2024-10-11 00:48:37,382 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-11 00:48:37,383 [ scc.repo] DEBUG ## PRs found:
2024-10-11 00:48:37,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-10-11 00:48:38,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-10-11 00:48:38,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-10-11 00:48:39,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-11 00:48:39,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-11 00:48:40,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-11 00:48:40,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-10-11 00:48:40,559 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-11 00:48:40,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-10-11 00:48:41,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-10-11 00:48:41,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-10-11 00:48:42,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-10-11 00:48:42,370 [ scc.repo] DEBUG ## Branches found:
2024-10-11 00:48:42,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-11 00:48:42,370 [ scc.git] DEBUG Get sha1 of %s
2024-10-11 00:48:42,370 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:48:42,375 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-11 00:48:42,379 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-11 00:48:42,379 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-11 00:48:42,382 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-11 00:48:42,387 [ scc.git] DEBUG Already up to date.
2024-10-11 00:48:42,387 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-10-11 00:48:42,747 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-10-11 00:48:42,747 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-10-11 00:48:42,751 [ scc.git] DEBUG ## Unique users: []
2024-10-11 00:48:42,751 [ scc.git] DEBUG Get sha1 of %s
2024-10-11 00:48:42,751 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:48:42,755 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-11 00:48:42,760 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:48:42,763 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-11 00:48:42,772 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-10-11 00:48:42,773 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-11 00:48:42,775 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-10-11 00:48:42,775 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-10-11 00:48:42,775 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-10-11 00:48:42,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:48:42,928 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-11 00:48:42,964 [ scc.git] DEBUG Get sha1 of %s
2024-10-11 00:48:42,964 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:48:42,967 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-11 00:48:43,000 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-11 00:48:43,006 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe5de48d490> has no local changes
2024-10-11 00:48:43,006 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#198 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/198/)'
2024-10-11 00:48:43,014 [ scc.git] DEBUG [detached HEAD aacba36] merge master -Dorg -Ssuccess-only
2024-10-11 00:48:43,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-11 00:48:43,014 [ scc.repo] DEBUG ## PRs found:
2024-10-11 00:48:43,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-10-11 00:48:44,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/431 HTTP/1.1" 200 None
2024-10-11 00:48:44,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-11 00:48:45,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-11 00:48:45,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-11 00:48:46,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-11 00:48:46,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0e500ec05bf9227b66b28a480b40e0936241d953?per_page=1 HTTP/1.1" 200 None
2024-10-11 00:48:46,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-11 00:48:47,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/status HTTP/1.1" 200 None
2024-10-11 00:48:47,231 [ scc.repo] DEBUG - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-11 00:48:47,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None
2024-10-11 00:48:48,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None
2024-10-11 00:48:48,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None
2024-10-11 00:48:48,648 [ scc.repo] DEBUG # ... Include label: include
2024-10-11 00:48:49,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-11 00:48:49,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-11 00:48:50,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-11 00:48:50,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-11 00:48:50,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1?per_page=1 HTTP/1.1" 200 None
2024-10-11 00:48:51,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-11 00:48:51,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/status HTTP/1.1" 200 None
2024-10-11 00:48:51,759 [ scc.repo] DEBUG - PR 427 Rdornier 'Add fileset folder creation'
2024-10-11 00:48:52,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-10-11 00:48:52,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-10-11 00:48:53,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-11 00:48:53,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-11 00:48:54,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-11 00:48:54,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-11 00:48:55,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-10-11 00:48:55,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-11 00:48:55,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-10-11 00:48:55,875 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-10-11 00:48:56,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-10-11 00:48:56,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-10-11 00:48:57,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-10-11 00:48:57,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-11 00:48:58,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-11 00:48:58,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-10-11 00:48:59,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-11 00:48:59,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-11 00:49:00,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-11 00:49:00,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-11 00:49:00,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-10-11 00:49:01,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-11 00:49:01,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-10-11 00:49:01,802 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-10-11 00:49:02,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-10-11 00:49:02,249 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-10-11 00:49:02,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-10-11 00:49:03,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-10-11 00:49:03,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-11 00:49:04,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-11 00:49:04,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-11 00:49:04,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-10-11 00:49:04,939 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-11 00:49:05,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-10-11 00:49:05,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-10-11 00:49:06,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-11 00:49:06,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-11 00:49:07,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-11 00:49:07,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-11 00:49:08,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-10-11 00:49:08,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-11 00:49:09,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-10-11 00:49:09,161 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-10-11 00:49:09,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-10-11 00:49:10,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-10-11 00:49:10,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-10-11 00:49:11,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-10-11 00:49:11,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-11 00:49:11,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-11 00:49:12,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-11 00:49:12,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-10-11 00:49:12,959 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-11 00:49:13,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-10-11 00:49:14,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-11 00:49:14,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-11 00:49:15,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-11 00:49:15,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-10-11 00:49:15,845 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-11 00:49:16,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-10-11 00:49:16,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-10-11 00:49:17,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-11 00:49:17,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-11 00:49:18,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-11 00:49:18,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-10-11 00:49:18,575 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-11 00:49:19,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-10-11 00:49:19,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-10-11 00:49:19,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-11 00:49:20,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-11 00:49:20,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-11 00:49:21,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-10-11 00:49:21,293 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-10-11 00:49:21,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-10-11 00:49:22,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-10-11 00:49:22,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-10-11 00:49:23,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-10-11 00:49:23,136 [ scc.repo] DEBUG ## Branches found:
2024-10-11 00:49:23,136 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-11 00:49:23,136 [ scc.git] DEBUG Get sha1 of %s
2024-10-11 00:49:23,136 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:49:23,141 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-11 00:49:23,145 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-11 00:49:23,145 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-11 00:49:23,150 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-11 00:49:23,155 [ scc.git] DEBUG Already up to date.
2024-10-11 00:49:23,155 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-10-11 00:49:24,489 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-11 00:49:24,490 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-10-11 00:49:24,494 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-10-11 00:49:24,809 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-11 00:49:24,810 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-10-11 00:49:24,814 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-10-11 00:49:25,116 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-11 00:49:25,117 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-10-11 00:49:25,121 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-10-11 00:49:25,419 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-11 00:49:25,419 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-10-11 00:49:25,423 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-10-11 00:49:26,017 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-11 00:49:26,017 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-10-11 00:49:26,021 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-10-11 00:49:26,360 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-11 00:49:26,360 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-10-11 00:49:26,364 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-10-11 00:49:26,663 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-11 00:49:26,664 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-10-11 00:49:26,668 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-10-11 00:49:26,958 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-11 00:49:26,958 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-10-11 00:49:26,963 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head'
2024-10-11 00:49:27,256 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-11 00:49:27,256 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD
2024-10-11 00:49:27,260 [ scc.git] DEBUG Calling 'git fetch origin pull/431/head'
2024-10-11 00:49:27,546 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-11 00:49:27,546 [ scc.git] DEBUG * branch refs/pull/431/head -> FETCH_HEAD
2024-10-11 00:49:27,550 [ scc.git] DEBUG ## Unique users: []
2024-10-11 00:49:27,551 [ scc.git] DEBUG Get sha1 of %s
2024-10-11 00:49:27,551 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:49:27,556 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-11 00:49:27,566 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:49:27,570 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-11 00:49:27,589 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-10-11 00:49:27,589 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-10-11 00:49:27,590 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-11 00:49:27,593 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-10-11 00:49:27,593 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-10-11 00:49:27,593 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-10-11 00:49:27,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:49:27,733 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-11 00:49:27,744 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:49:27,748 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-11 00:49:28,097 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-11 00:49:28,097 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-10-11 00:49:28,098 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-11 00:49:28,105 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-10-11 00:49:28,105 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-10-11 00:49:28,105 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-10-11 00:49:28,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:49:28,242 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-11 00:49:28,253 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:49:28,257 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-11 00:49:28,275 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-10-11 00:49:28,276 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-11 00:49:28,278 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-10-11 00:49:28,278 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-10-11 00:49:28,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:49:28,626 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-11 00:49:28,638 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:49:28,641 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-11 00:49:28,953 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-10-11 00:49:28,953 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-10-11 00:49:28,954 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-11 00:49:28,957 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-10-11 00:49:28,957 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-10-11 00:49:28,957 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-10-11 00:49:29,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:49:29,117 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-11 00:49:29,129 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:49:29,134 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-11 00:49:29,198 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-11 00:49:29,200 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-10-11 00:49:29,200 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-10-11 00:49:29,200 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-10-11 00:49:29,200 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-10-11 00:49:29,200 [ scc.git] DEBUG create mode 100644 connect.py
2024-10-11 00:49:29,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:49:29,488 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-11 00:49:29,499 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:49:29,503 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-11 00:49:29,563 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-10-11 00:49:29,564 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-11 00:49:29,567 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-10-11 00:49:29,567 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-10-11 00:49:29,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:49:29,867 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-10-11 00:49:29,878 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:49:29,882 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-10-11 00:49:29,901 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-10-11 00:49:29,901 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-11 00:49:29,905 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-10-11 00:49:29,905 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-10-11 00:49:30,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:49:30,248 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-11 00:49:30,258 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:49:30,262 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-11 00:49:30,445 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-11 00:49:30,446 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-11 00:49:30,453 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-10-11 00:49:30,453 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-10-11 00:49:30,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:49:30,629 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-11 00:49:30,641 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:49:30,644 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-11 00:49:30,664 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-11 00:49:30,666 [ scc.git] DEBUG .gitignore | 1 +
2024-10-11 00:49:30,667 [ scc.git] DEBUG src/omero/plugins/download.py | 17 ++++++++++++-----
2024-10-11 00:49:30,667 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 5 deletions(-)
2024-10-11 00:49:31,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:49:31,015 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-11 00:49:31,026 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:49:31,030 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 431 (omero.HdfStorage.update: add size check on data.rowNumbers) 0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-11 00:49:31,050 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-11 00:49:31,053 [ scc.git] DEBUG src/omero/hdfstorageV2.py | 1 +
2024-10-11 00:49:31,053 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2024-10-11 00:49:31,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:49:31,394 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-11 00:49:31,431 [ scc.git] DEBUG Get sha1 of %s
2024-10-11 00:49:31,431 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:49:31,435 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-11 00:49:31,469 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-11 00:49:31,475 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe5dd429c70> has no local changes
2024-10-11 00:49:31,475 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Generated by OMERO-python-superbuild-push#198 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/198/)'
2024-10-11 00:49:31,484 [ scc.git] DEBUG [detached HEAD bb32633b] merge master -Dorg -Ssuccess-only
2024-10-11 00:49:31,484 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-11 00:49:31,484 [ scc.git] INFO Overriding base-branch from master to develop
2024-10-11 00:49:31,484 [ scc.repo] DEBUG ## PRs found:
2024-10-11 00:49:32,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-10-11 00:49:32,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-10-11 00:49:33,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-11 00:49:33,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-11 00:49:33,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-11 00:49:34,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-11 00:49:34,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-10-11 00:49:34,873 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-11 00:49:35,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-10-11 00:49:35,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-10-11 00:49:36,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-10-11 00:49:36,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-10-11 00:49:37,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-10-11 00:49:37,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-10-11 00:49:38,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-11 00:49:38,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-11 00:49:39,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-11 00:49:39,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-10-11 00:49:39,570 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-11 00:49:40,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-10-11 00:49:40,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-10-11 00:49:40,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-10-11 00:49:41,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-10-11 00:49:41,409 [ scc.repo] DEBUG ## Branches found:
2024-10-11 00:49:41,409 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-11 00:49:41,409 [ scc.git] DEBUG Get sha1 of %s
2024-10-11 00:49:41,409 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:49:41,414 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-10-11 00:49:41,418 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-11 00:49:41,418 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-10-11 00:49:41,422 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-10-11 00:49:41,426 [ scc.git] DEBUG Already up to date.
2024-10-11 00:49:41,426 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-10-11 00:49:41,767 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-11 00:49:41,767 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-10-11 00:49:41,771 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-10-11 00:49:42,074 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-11 00:49:42,074 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-10-11 00:49:42,078 [ scc.git] DEBUG ## Unique users: []
2024-10-11 00:49:42,078 [ scc.git] DEBUG Get sha1 of %s
2024-10-11 00:49:42,078 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:49:42,082 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-11 00:49:42,089 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:49:42,093 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-11 00:49:42,102 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-10-11 00:49:42,102 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-10-11 00:49:42,102 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-10-11 00:49:42,102 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-10-11 00:49:42,106 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-11 00:49:42,111 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-11 00:49:42,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:49:42,237 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-11 00:49:42,243 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-11 00:49:42,247 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#198](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/198/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/198/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-10-11 00:49:42,251 [ scc.config] DEBUG Found github.token
2024-10-11 00:49:42,251 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-10-11 00:49:42,251 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-11 00:49:42,257 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:49:42,263 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-11 00:49:42,272 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-11 00:49:42,274 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-10-11 00:49:42,274 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-10-11 00:49:42,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:49:42,620 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-11 00:49:42,657 [ scc.git] DEBUG Get sha1 of %s
2024-10-11 00:49:42,657 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:49:42,661 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-11 00:49:42,695 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-11 00:49:42,699 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe5dd43bbe0> has no local changes
2024-10-11 00:49:42,699 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#198 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/198/)'
2024-10-11 00:49:42,707 [ scc.git] DEBUG [detached HEAD 17f51dd] merge master -Dorg -Ssuccess-only
2024-10-11 00:49:42,707 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-11 00:49:42,707 [ scc.repo] DEBUG ## PRs found:
2024-10-11 00:49:43,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-10-11 00:49:43,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/585 HTTP/1.1" 200 None
2024-10-11 00:49:44,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583 HTTP/1.1" 200 None
2024-10-11 00:49:44,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-11 00:49:45,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-11 00:49:45,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-11 00:49:45,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-11 00:49:46,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/aa50f469842b9687c74df8765d72241e6e37d32c?per_page=1 HTTP/1.1" 200 None
2024-10-11 00:49:46,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-11 00:49:47,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/status HTTP/1.1" 200 None
2024-10-11 00:49:47,284 [ scc.repo] DEBUG - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-11 00:49:47,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581 HTTP/1.1" 200 None
2024-10-11 00:49:48,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581/comments HTTP/1.1" 200 None
2024-10-11 00:49:48,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/580 HTTP/1.1" 200 None
2024-10-11 00:49:49,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-11 00:49:49,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-11 00:49:50,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-11 00:49:50,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-11 00:49:51,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc?per_page=1 HTTP/1.1" 200 None
2024-10-11 00:49:51,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-11 00:49:51,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/status HTTP/1.1" 200 None
2024-10-11 00:49:51,909 [ scc.repo] DEBUG - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-11 00:49:52,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568 HTTP/1.1" 200 None
2024-10-11 00:49:52,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568/comments HTTP/1.1" 200 None
2024-10-11 00:49:53,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-10-11 00:49:53,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-10-11 00:49:54,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-10-11 00:49:54,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-10-11 00:49:55,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-11 00:49:55,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-11 00:49:56,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-11 00:49:56,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-11 00:49:57,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-10-11 00:49:57,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-11 00:49:57,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-10-11 00:49:57,864 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-11 00:49:58,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-10-11 00:49:58,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-10-11 00:49:59,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-11 00:49:59,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-11 00:50:00,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-11 00:50:00,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-11 00:50:01,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-10-11 00:50:01,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-11 00:50:01,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-10-11 00:50:01,957 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-11 00:50:02,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-10-11 00:50:02,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-10-11 00:50:03,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-10-11 00:50:03,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-11 00:50:04,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-11 00:50:04,430 [ scc.repo] DEBUG ## Branches found:
2024-10-11 00:50:04,430 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-11 00:50:04,430 [ scc.git] DEBUG Get sha1 of %s
2024-10-11 00:50:04,430 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:50:04,434 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-11 00:50:04,438 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-11 00:50:04,438 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-11 00:50:04,443 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-11 00:50:04,447 [ scc.git] DEBUG Already up to date.
2024-10-11 00:50:04,447 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-10-11 00:50:04,756 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-11 00:50:04,756 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-10-11 00:50:04,760 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-10-11 00:50:05,071 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-11 00:50:05,072 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-10-11 00:50:05,076 [ scc.git] DEBUG Calling 'git fetch origin pull/580/head'
2024-10-11 00:50:05,385 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-11 00:50:05,385 [ scc.git] DEBUG * branch refs/pull/580/head -> FETCH_HEAD
2024-10-11 00:50:05,390 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head'
2024-10-11 00:50:05,779 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-11 00:50:05,779 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD
2024-10-11 00:50:05,784 [ scc.git] DEBUG ## Unique users: []
2024-10-11 00:50:05,784 [ scc.git] DEBUG Get sha1 of %s
2024-10-11 00:50:05,784 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:50:05,788 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-11 00:50:05,794 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:50:05,798 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-11 00:50:05,813 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-10-11 00:50:05,813 [ scc.git] DEBUG Auto-merging setup.py
2024-10-11 00:50:05,815 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-11 00:50:05,818 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-10-11 00:50:05,818 [ scc.git] DEBUG setup.py | 1 +
2024-10-11 00:50:05,818 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-10-11 00:50:05,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:50:05,941 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-11 00:50:05,947 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:50:05,951 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-11 00:50:05,999 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-10-11 00:50:05,999 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-10-11 00:50:06,000 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-11 00:50:06,004 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-10-11 00:50:06,004 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-10-11 00:50:06,004 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-10-11 00:50:06,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:50:06,323 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-11 00:50:06,331 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:50:06,334 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 580 (omeroweb.webgateway.obj_id_bitmask: handle empty query results) 1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-11 00:50:06,351 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-11 00:50:06,355 [ scc.git] DEBUG omeroweb/webgateway/views.py | 6 ++++++
2024-10-11 00:50:06,355 [ scc.git] DEBUG 1 file changed, 6 insertions(+)
2024-10-11 00:50:06,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:50:06,699 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-11 00:50:06,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:50:06,710 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Allow users to click a group name to show data from all users in that group) aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-11 00:50:06,727 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-11 00:50:06,730 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_content.html | 6 +++++-
2024-10-11 00:50:06,730 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_dropdown2.html | 2 --
2024-10-11 00:50:06,730 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 3 deletions(-)
2024-10-11 00:50:07,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:50:07,098 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-11 00:50:07,137 [ scc.git] DEBUG Get sha1 of %s
2024-10-11 00:50:07,137 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-11 00:50:07,141 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-11 00:50:07,176 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-11 00:50:07,185 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe5dc38cfa0> has no local changes
2024-10-11 00:50:07,185 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
Generated by OMERO-python-superbuild-push#198 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/198/)'
2024-10-11 00:50:07,194 [ scc.git] DEBUG [detached HEAD 2a8072721] merge master -Dorg -Ssuccess-only
2024-10-11 00:50:07,194 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-11 00:50:07,194 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-11 00:50:07,238 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-10-11 00:50:07,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:50:07,538 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-10-11 00:50:07,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:50:07,911 [ scc.config] DEBUG Found submodule.omero-py.url
2024-10-11 00:50:08,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:50:08,290 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-10-11 00:50:08,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:50:08,683 [ scc.config] DEBUG Found submodule.omero-web.url
2024-10-11 00:50:09,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-11 00:50:09,066 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-11 00:50:09,091 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe5de72a8b0> has local changes
2024-10-11 00:50:09,091 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
Generated by OMERO-python-superbuild-push#198 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/198/)'
2024-10-11 00:50:09,098 [ scc.git] DEBUG [detached HEAD 4e96860] merge master -Dorg -Ssuccess-only
2024-10-11 00:50:09,099 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-11 00:50:09,099 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-10-11 00:50:09,099 [ scc.merge] INFO Already up to date.
2024-10-11 00:50:09,099 [ scc.merge] INFO
2024-10-11 00:50:09,099 [ scc.merge] INFO Merged PRs:
2024-10-11 00:50:09,099 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-11 00:50:09,099 [ scc.merge] INFO
2024-10-11 00:50:09,099 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-10-11 00:50:09,099 [ scc.merge] INFO Already up to date.
2024-10-11 00:50:09,099 [ scc.merge] INFO
2024-10-11 00:50:09,099 [ scc.merge] INFO Merged PRs:
2024-10-11 00:50:09,099 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-11 00:50:09,099 [ scc.merge] INFO
2024-10-11 00:50:09,099 [ scc.merge] INFO Repository: ome/omero-marshal
2024-10-11 00:50:09,099 [ scc.merge] INFO Excluded PRs:
2024-10-11 00:50:09,099 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-10-11 00:50:09,099 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-10-11 00:50:09,099 [ scc.merge] INFO Already up to date.
2024-10-11 00:50:09,099 [ scc.merge] INFO
2024-10-11 00:50:09,099 [ scc.merge] INFO Merged PRs:
2024-10-11 00:50:09,099 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-11 00:50:09,099 [ scc.merge] INFO
2024-10-11 00:50:09,100 [ scc.merge] INFO Repository: ome/omero-py
2024-10-11 00:50:09,100 [ scc.merge] INFO Excluded PRs:
2024-10-11 00:50:09,100 [ scc.merge] INFO - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
2024-10-11 00:50:09,100 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-10-11 00:50:09,100 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-10-11 00:50:09,100 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-10-11 00:50:09,100 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-10-11 00:50:09,100 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-10-11 00:50:09,100 [ scc.merge] INFO Already up to date.
2024-10-11 00:50:09,100 [ scc.merge] INFO
2024-10-11 00:50:09,100 [ scc.merge] INFO Merged PRs:
2024-10-11 00:50:09,100 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-10-11 00:50:09,100 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-11 00:50:09,100 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-11 00:50:09,100 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-11 00:50:09,100 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-10-11 00:50:09,100 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-11 00:50:09,100 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-10-11 00:50:09,100 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-10-11 00:50:09,100 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation'
2024-10-11 00:50:09,100 [ scc.merge] INFO - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-11 00:50:09,100 [ scc.merge] INFO
2024-10-11 00:50:09,100 [ scc.merge] INFO Repository: ome/omero-scripts
2024-10-11 00:50:09,100 [ scc.merge] INFO Excluded PRs:
2024-10-11 00:50:09,100 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-10-11 00:50:09,100 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-10-11 00:50:09,100 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-10-11 00:50:09,100 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-10-11 00:50:09,100 [ scc.merge] INFO Already up to date.
2024-10-11 00:50:09,100 [ scc.merge] INFO
2024-10-11 00:50:09,100 [ scc.merge] INFO Merged PRs:
2024-10-11 00:50:09,100 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-11 00:50:09,100 [ scc.merge] INFO
2024-10-11 00:50:09,100 [ scc.merge] INFO Conflicting PRs (not included):
2024-10-11 00:50:09,100 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-11 00:50:09,101 [ scc.merge] INFO
2024-10-11 00:50:09,101 [ scc.merge] INFO Repository: ome/omero-web
2024-10-11 00:50:09,101 [ scc.merge] INFO Excluded PRs:
2024-10-11 00:50:09,101 [ scc.merge] INFO - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-10-11 00:50:09,101 [ scc.merge] INFO - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
2024-10-11 00:50:09,101 [ scc.merge] INFO - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
2024-10-11 00:50:09,101 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-10-11 00:50:09,101 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-10-11 00:50:09,101 [ scc.merge] INFO Already up to date.
2024-10-11 00:50:09,101 [ scc.merge] INFO
2024-10-11 00:50:09,101 [ scc.merge] INFO Merged PRs:
2024-10-11 00:50:09,101 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-11 00:50:09,101 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-11 00:50:09,101 [ scc.merge] INFO - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-11 00:50:09,101 [ scc.merge] INFO - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-11 00:50:09,101 [ scc.merge] INFO
2024-10-11 00:50:09,101 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-11 00:50:09,101 [ scc.git] DEBUG Calling 'git remote'
2024-10-11 00:50:09,105 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-11 00:50:09,105 [ scc.git] DEBUG Calling 'git remote'
2024-10-11 00:50:09,109 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-11 00:50:09,109 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-11 00:50:09,109 [ scc.git] DEBUG Calling 'git remote'
2024-10-11 00:50:09,113 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-11 00:50:09,113 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-11 00:50:09,113 [ scc.git] DEBUG Calling 'git remote'
2024-10-11 00:50:09,117 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-11 00:50:09,117 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-11 00:50:09,117 [ scc.git] DEBUG Calling 'git remote'
2024-10-11 00:50:09,121 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-11 00:50:09,121 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-11 00:50:09,121 [ scc.git] DEBUG Calling 'git remote'
2024-10-11 00:50:09,124 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 4fd72efa
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from da5b7d11f
nothing to commit, working tree clean
HEAD detached from e849d72
nothing to commit, working tree clean
2024-10-11 00:50:36,882 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
![[Jenkins]](/jenkins/static/4f42acd4/images/svgs/logo.svg){kind=logo}
