Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-10-13 00:32:54,619 [ scc.config] DEBUG Found github.token
2024-10-13 00:32:54,622 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-13 00:32:54,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:32:55,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:32:55,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-13 00:32:55,614 [ scc.gh] DEBUG 4441 remaining from 5000 (Reset at 01:10
2024-10-13 00:32:55,615 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-13 00:32:55,620 [ scc.git] DEBUG Check current status
2024-10-13 00:32:55,620 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-13 00:32:55,623 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-13 00:32:55,623 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-13 00:32:55,662 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-13 00:32:55,665 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-13 00:32:55,668 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-13 00:32:55,672 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-13 00:32:55,675 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-13 00:32:55,679 [ scc.config] DEBUG Found remote.origin.url
2024-10-13 00:32:56,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-13 00:32:56,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-13 00:32:56,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-13 00:32:57,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-13 00:32:57,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-13 00:32:57,758 [ scc.git] DEBUG Resetting...
2024-10-13 00:32:57,758 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-13 00:32:57,764 [ scc.git] DEBUG HEAD is now at e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-13 00:32:57,764 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-13 00:32:57,817 [ scc.git] DEBUG Check current status
2024-10-13 00:32:57,817 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-13 00:32:57,822 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-13 00:32:57,822 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-13 00:32:57,862 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-13 00:32:57,865 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-13 00:32:57,869 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-13 00:32:57,873 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-13 00:32:57,876 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-13 00:32:57,877 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-13 00:32:57,877 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-13 00:32:57,877 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-13 00:32:57,877 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-13 00:32:57,877 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-13 00:32:57,878 [ scc.repo] DEBUG ## PRs found:
2024-10-13 00:32:58,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-13 00:32:58,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-13 00:32:58,744 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-13 00:32:58,744 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-13 00:32:58,745 [ scc.repo] DEBUG ## Branches found:
2024-10-13 00:32:58,745 [ scc.git] DEBUG Get sha1 of %s
2024-10-13 00:32:58,745 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:32:58,751 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-13 00:32:58,754 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-13 00:32:58,754 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-13 00:32:58,758 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-13 00:32:58,761 [ scc.git] DEBUG Already up to date.
2024-10-13 00:32:58,762 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-13 00:32:59,103 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-13 00:32:59,103 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-13 00:32:59,108 [ scc.git] DEBUG ## Unique users: []
2024-10-13 00:32:59,108 [ scc.git] DEBUG Get sha1 of %s
2024-10-13 00:32:59,108 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:32:59,113 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-13 00:32:59,118 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:32:59,122 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-13 00:32:59,131 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-13 00:32:59,133 [ scc.git] DEBUG omero-py | 2 +-
2024-10-13 00:32:59,133 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-10-13 00:32:59,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:32:59,268 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-13 00:32:59,365 [ scc.git] DEBUG Submodule path 'omero-py': checked out '4fd72efaa8cdbec9da98e1d28678af16878a86ba'
2024-10-13 00:32:59,366 [ scc.git] DEBUG Get sha1 of %s
2024-10-13 00:32:59,366 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:32:59,370 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-13 00:32:59,581 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9941eaffd0> has no local changes
2024-10-13 00:32:59,581 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Generated by OMERO-python-superbuild-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/200/)'
2024-10-13 00:32:59,607 [ scc.git] DEBUG [detached HEAD 735058d] merge master -Dorg -Snone
2024-10-13 00:32:59,608 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-13 00:32:59,608 [ scc.merge] INFO Already up to date.
2024-10-13 00:32:59,608 [ scc.merge] INFO
2024-10-13 00:32:59,608 [ scc.merge] INFO Merged PRs:
2024-10-13 00:32:59,608 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-13 00:32:59,608 [ scc.merge] INFO
2024-10-13 00:32:59,608 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-13 00:32:59,608 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-13 00:33:01,859 [ scc.config] DEBUG Found github.token
2024-10-13 00:33:01,862 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-13 00:33:02,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:33:02,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:33:02,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-13 00:33:02,830 [ scc.gh] DEBUG 4431 remaining from 5000 (Reset at 01:10
2024-10-13 00:33:02,831 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-13 00:33:02,835 [ scc.git] DEBUG Check current status
2024-10-13 00:33:02,835 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-13 00:33:02,839 [ scc.git] DEBUG 735058d merge master -Dorg -Snone
2024-10-13 00:33:02,839 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-13 00:33:02,878 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-13 00:33:02,881 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-13 00:33:02,884 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-13 00:33:02,889 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-13 00:33:02,892 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-13 00:33:02,897 [ scc.config] DEBUG Found remote.origin.url
2024-10-13 00:33:02,897 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-10-13 00:33:02,899 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-13 00:33:03,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-13 00:33:03,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-13 00:33:04,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-13 00:33:04,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-13 00:33:04,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-13 00:33:04,933 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-13 00:33:04,980 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-13 00:33:04,980 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-13 00:33:04,984 [ scc.git] DEBUG Check current status
2024-10-13 00:33:04,984 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-13 00:33:04,987 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-10-13 00:33:04,987 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-13 00:33:05,029 [ scc.config] DEBUG Found remote.origin.url
2024-10-13 00:33:05,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-10-13 00:33:05,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-13 00:33:06,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-13 00:33:06,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-13 00:33:07,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-13 00:33:07,013 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-13 00:33:07,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-13 00:33:07,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-13 00:33:07,054 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-13 00:33:07,059 [ scc.git] DEBUG Check current status
2024-10-13 00:33:07,059 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-13 00:33:07,062 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-10-13 00:33:07,063 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-13 00:33:07,103 [ scc.config] DEBUG Found remote.origin.url
2024-10-13 00:33:07,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-10-13 00:33:07,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-13 00:33:08,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-13 00:33:08,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-13 00:33:09,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-13 00:33:09,331 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-13 00:33:09,371 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-13 00:33:09,372 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-13 00:33:09,372 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-13 00:33:09,376 [ scc.git] DEBUG Check current status
2024-10-13 00:33:09,376 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-13 00:33:09,381 [ scc.git] DEBUG 4fd72efa Bump version: 5.19.5 → 5.19.6.dev0
2024-10-13 00:33:09,381 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-13 00:33:09,423 [ scc.config] DEBUG Found remote.origin.url
2024-10-13 00:33:09,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-10-13 00:33:10,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-13 00:33:10,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-13 00:33:11,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-13 00:33:11,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-13 00:33:11,476 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-13 00:33:11,515 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-13 00:33:11,516 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-13 00:33:11,516 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-13 00:33:11,520 [ scc.git] DEBUG Check current status
2024-10-13 00:33:11,520 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-13 00:33:11,524 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-13 00:33:11,524 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-13 00:33:11,566 [ scc.config] DEBUG Found remote.origin.url
2024-10-13 00:33:11,567 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-10-13 00:33:11,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-10-13 00:33:12,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-13 00:33:12,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-13 00:33:13,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-13 00:33:13,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-13 00:33:13,601 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-13 00:33:13,644 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-13 00:33:13,645 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-13 00:33:13,646 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-13 00:33:13,659 [ scc.git] DEBUG Check current status
2024-10-13 00:33:13,659 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-13 00:33:13,666 [ scc.git] DEBUG da5b7d11f Bump version: 5.27.2 → 5.27.3.dev0
2024-10-13 00:33:13,666 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-13 00:33:13,707 [ scc.config] DEBUG Found remote.origin.url
2024-10-13 00:33:14,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-10-13 00:33:14,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-13 00:33:14,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-13 00:33:15,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-13 00:33:15,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-13 00:33:15,717 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-13 00:33:15,759 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-13 00:33:15,760 [ scc.git] DEBUG Resetting...
2024-10-13 00:33:15,760 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-13 00:33:15,765 [ scc.git] DEBUG HEAD is now at 735058d merge master -Dorg -Snone
2024-10-13 00:33:15,765 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-13 00:33:15,818 [ scc.git] DEBUG Check current status
2024-10-13 00:33:15,818 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-13 00:33:15,822 [ scc.git] DEBUG 735058d merge master -Dorg -Snone
2024-10-13 00:33:15,822 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-13 00:33:15,860 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-13 00:33:15,863 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-13 00:33:15,866 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-13 00:33:15,870 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-13 00:33:15,873 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-13 00:33:15,874 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-13 00:33:15,874 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-13 00:33:15,874 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-13 00:33:15,874 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-13 00:33:15,874 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-13 00:33:15,874 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-10-13 00:33:15,874 [ scc.repo] DEBUG ## PRs found:
2024-10-13 00:33:16,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-13 00:33:16,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-13 00:33:16,602 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-13 00:33:17,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-13 00:33:17,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-13 00:33:18,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-13 00:33:18,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/9660559833988d271074de56e54f2462a7be74e9?per_page=1 HTTP/1.1" 200 2
2024-10-13 00:33:18,714 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-13 00:33:18,714 [ scc.repo] DEBUG ## Branches found:
2024-10-13 00:33:18,714 [ scc.git] DEBUG Get sha1 of %s
2024-10-13 00:33:18,714 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:33:18,718 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-13 00:33:18,722 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-13 00:33:18,722 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-13 00:33:18,727 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-13 00:33:18,732 [ scc.git] DEBUG Already up to date.
2024-10-13 00:33:18,732 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-13 00:33:19,061 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-13 00:33:19,061 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-13 00:33:19,066 [ scc.git] DEBUG ## Unique users: []
2024-10-13 00:33:19,066 [ scc.git] DEBUG Get sha1 of %s
2024-10-13 00:33:19,066 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:33:19,071 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-13 00:33:19,075 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:33:19,078 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-13 00:33:19,082 [ scc.git] DEBUG Already up to date.
2024-10-13 00:33:19,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:33:19,215 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-13 00:33:19,255 [ scc.git] DEBUG Get sha1 of %s
2024-10-13 00:33:19,256 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:33:19,260 [ scc.repo] DEBUG ## PRs found:
2024-10-13 00:33:19,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-10-13 00:33:20,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-10-13 00:33:20,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-10-13 00:33:21,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-13 00:33:21,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-13 00:33:21,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-13 00:33:22,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-10-13 00:33:22,375 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-13 00:33:22,375 [ scc.repo] DEBUG ## Branches found:
2024-10-13 00:33:22,375 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-13 00:33:22,375 [ scc.git] DEBUG Get sha1 of %s
2024-10-13 00:33:22,375 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:33:22,380 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-13 00:33:22,383 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-13 00:33:22,384 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-13 00:33:22,388 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-13 00:33:22,393 [ scc.git] DEBUG Already up to date.
2024-10-13 00:33:22,393 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-10-13 00:33:22,754 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-10-13 00:33:22,754 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-10-13 00:33:22,758 [ scc.git] DEBUG ## Unique users: []
2024-10-13 00:33:22,758 [ scc.git] DEBUG Get sha1 of %s
2024-10-13 00:33:22,758 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:33:22,763 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-13 00:33:22,768 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:33:22,771 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-13 00:33:23,073 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-10-13 00:33:23,074 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-10-13 00:33:23,074 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-10-13 00:33:23,074 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-10-13 00:33:23,074 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-10-13 00:33:23,074 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-10-13 00:33:23,074 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-10-13 00:33:23,074 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-10-13 00:33:23,074 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-10-13 00:33:23,074 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-13 00:33:23,078 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-10-13 00:33:23,078 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-10-13 00:33:23,078 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-10-13 00:33:23,078 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-10-13 00:33:23,078 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-10-13 00:33:23,078 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-10-13 00:33:23,078 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-10-13 00:33:23,078 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-10-13 00:33:23,078 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-10-13 00:33:23,078 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-10-13 00:33:23,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:33:23,214 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-13 00:33:23,252 [ scc.git] DEBUG Get sha1 of %s
2024-10-13 00:33:23,252 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:33:23,257 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-13 00:33:23,294 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-13 00:33:23,300 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fab458d9790> has no local changes
2024-10-13 00:33:23,300 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/200/)'
2024-10-13 00:33:23,307 [ scc.git] DEBUG [detached HEAD 0aadd98] merge master -Dorg -Ssuccess-only
2024-10-13 00:33:23,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-13 00:33:23,308 [ scc.repo] DEBUG ## PRs found:
2024-10-13 00:33:23,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-10-13 00:33:24,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-10-13 00:33:24,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-10-13 00:33:25,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-13 00:33:25,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-13 00:33:26,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-13 00:33:26,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-10-13 00:33:26,672 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-13 00:33:27,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-10-13 00:33:27,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-10-13 00:33:28,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-10-13 00:33:28,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-10-13 00:33:28,433 [ scc.repo] DEBUG ## Branches found:
2024-10-13 00:33:28,434 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-13 00:33:28,434 [ scc.git] DEBUG Get sha1 of %s
2024-10-13 00:33:28,434 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:33:28,439 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-13 00:33:28,443 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-13 00:33:28,443 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-13 00:33:28,447 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-13 00:33:28,451 [ scc.git] DEBUG Already up to date.
2024-10-13 00:33:28,451 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-10-13 00:33:28,857 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-10-13 00:33:28,857 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-10-13 00:33:28,862 [ scc.git] DEBUG ## Unique users: []
2024-10-13 00:33:28,862 [ scc.git] DEBUG Get sha1 of %s
2024-10-13 00:33:28,862 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:33:28,867 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-13 00:33:28,872 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:33:28,876 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-13 00:33:28,887 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-10-13 00:33:28,888 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-13 00:33:28,891 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-10-13 00:33:28,891 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-10-13 00:33:28,891 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-10-13 00:33:29,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:33:29,037 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-13 00:33:29,077 [ scc.git] DEBUG Get sha1 of %s
2024-10-13 00:33:29,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:33:29,081 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-13 00:33:29,121 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-13 00:33:29,127 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fab4591f730> has no local changes
2024-10-13 00:33:29,127 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/200/)'
2024-10-13 00:33:29,136 [ scc.git] DEBUG [detached HEAD 1115839] merge master -Dorg -Ssuccess-only
2024-10-13 00:33:29,136 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-13 00:33:29,136 [ scc.repo] DEBUG ## PRs found:
2024-10-13 00:33:29,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-10-13 00:33:30,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/431 HTTP/1.1" 200 None
2024-10-13 00:33:30,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-13 00:33:31,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-13 00:33:31,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-13 00:33:32,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-13 00:33:32,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0e500ec05bf9227b66b28a480b40e0936241d953?per_page=1 HTTP/1.1" 200 None
2024-10-13 00:33:32,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-13 00:33:33,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/status HTTP/1.1" 200 None
2024-10-13 00:33:33,370 [ scc.repo] DEBUG - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-13 00:33:33,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None
2024-10-13 00:33:34,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None
2024-10-13 00:33:34,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None
2024-10-13 00:33:34,906 [ scc.repo] DEBUG # ... Include label: include
2024-10-13 00:33:35,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-13 00:33:35,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-13 00:33:36,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-13 00:33:36,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-13 00:33:37,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1?per_page=1 HTTP/1.1" 200 None
2024-10-13 00:33:37,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-13 00:33:38,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/status HTTP/1.1" 200 None
2024-10-13 00:33:38,134 [ scc.repo] DEBUG - PR 427 Rdornier 'Add fileset folder creation'
2024-10-13 00:33:38,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-10-13 00:33:39,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-10-13 00:33:39,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-13 00:33:40,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-13 00:33:40,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-13 00:33:41,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-13 00:33:41,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-10-13 00:33:41,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-13 00:33:42,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-10-13 00:33:42,305 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-10-13 00:33:42,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-10-13 00:33:43,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-10-13 00:33:43,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-10-13 00:33:44,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-13 00:33:44,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-13 00:33:45,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-10-13 00:33:45,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-13 00:33:46,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-13 00:33:46,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-13 00:33:46,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-13 00:33:47,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-10-13 00:33:47,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-13 00:33:48,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-10-13 00:33:48,190 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-10-13 00:33:48,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-10-13 00:33:48,670 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-10-13 00:33:49,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-10-13 00:33:49,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-10-13 00:33:49,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-13 00:33:50,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-13 00:33:50,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-13 00:33:51,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-10-13 00:33:51,232 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-13 00:33:51,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-10-13 00:33:52,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-10-13 00:33:52,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-13 00:33:53,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-13 00:33:53,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-13 00:33:53,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-13 00:33:54,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-10-13 00:33:54,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-13 00:33:55,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-10-13 00:33:55,267 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-10-13 00:33:55,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-10-13 00:33:56,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-10-13 00:33:56,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-10-13 00:33:57,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-10-13 00:33:57,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-13 00:33:57,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-13 00:33:58,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-13 00:33:58,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-10-13 00:33:58,866 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-13 00:33:59,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-10-13 00:33:59,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-13 00:34:00,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-13 00:34:00,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-13 00:34:01,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-10-13 00:34:01,244 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-13 00:34:01,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-10-13 00:34:02,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-10-13 00:34:02,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-13 00:34:03,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-13 00:34:03,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-13 00:34:04,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-10-13 00:34:04,022 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-13 00:34:04,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-10-13 00:34:04,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-10-13 00:34:05,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-13 00:34:05,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-13 00:34:06,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-13 00:34:06,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-10-13 00:34:06,768 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-10-13 00:34:07,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-10-13 00:34:07,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-10-13 00:34:08,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-10-13 00:34:08,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-10-13 00:34:08,566 [ scc.repo] DEBUG ## Branches found:
2024-10-13 00:34:08,567 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-13 00:34:08,567 [ scc.git] DEBUG Get sha1 of %s
2024-10-13 00:34:08,567 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:34:08,571 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-13 00:34:08,576 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-13 00:34:08,576 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-13 00:34:08,581 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-13 00:34:08,586 [ scc.git] DEBUG Already up to date.
2024-10-13 00:34:08,587 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-10-13 00:34:10,265 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-13 00:34:10,265 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-10-13 00:34:10,270 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-10-13 00:34:10,584 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-13 00:34:10,585 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-10-13 00:34:10,590 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-10-13 00:34:10,961 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-13 00:34:10,961 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-10-13 00:34:10,966 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-10-13 00:34:11,261 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-13 00:34:11,261 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-10-13 00:34:11,266 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-10-13 00:34:11,698 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-13 00:34:11,698 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-10-13 00:34:11,703 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-10-13 00:34:12,002 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-13 00:34:12,003 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-10-13 00:34:12,008 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-10-13 00:34:12,315 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-13 00:34:12,316 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-10-13 00:34:12,322 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-10-13 00:34:12,719 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-13 00:34:12,719 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-10-13 00:34:12,724 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head'
2024-10-13 00:34:13,386 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-13 00:34:13,386 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD
2024-10-13 00:34:13,391 [ scc.git] DEBUG Calling 'git fetch origin pull/431/head'
2024-10-13 00:34:13,801 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-13 00:34:13,801 [ scc.git] DEBUG * branch refs/pull/431/head -> FETCH_HEAD
2024-10-13 00:34:13,807 [ scc.git] DEBUG ## Unique users: []
2024-10-13 00:34:13,807 [ scc.git] DEBUG Get sha1 of %s
2024-10-13 00:34:13,807 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:34:13,812 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-13 00:34:13,823 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:34:13,827 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-13 00:34:14,086 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-10-13 00:34:14,087 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-10-13 00:34:14,087 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-13 00:34:14,091 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-10-13 00:34:14,091 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-10-13 00:34:14,091 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-10-13 00:34:14,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:34:14,232 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-13 00:34:14,244 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:34:14,249 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-13 00:34:14,282 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-13 00:34:14,282 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-10-13 00:34:14,283 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-13 00:34:14,290 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-10-13 00:34:14,290 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-10-13 00:34:14,290 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-10-13 00:34:14,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:34:14,621 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-13 00:34:14,633 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:34:14,638 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-13 00:34:14,805 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-10-13 00:34:14,806 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-13 00:34:14,809 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-10-13 00:34:14,809 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-10-13 00:34:15,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:34:15,011 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-13 00:34:15,024 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:34:15,029 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-13 00:34:15,050 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-10-13 00:34:15,050 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-10-13 00:34:15,051 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-13 00:34:15,054 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-10-13 00:34:15,054 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-10-13 00:34:15,054 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-10-13 00:34:15,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:34:15,391 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-13 00:34:15,403 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:34:15,406 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-13 00:34:15,424 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-13 00:34:15,426 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-10-13 00:34:15,426 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-10-13 00:34:15,426 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-10-13 00:34:15,426 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-10-13 00:34:15,426 [ scc.git] DEBUG create mode 100644 connect.py
2024-10-13 00:34:15,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:34:15,772 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-13 00:34:15,785 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:34:15,790 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-13 00:34:15,808 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-10-13 00:34:15,809 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-13 00:34:15,812 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-10-13 00:34:15,813 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-10-13 00:34:16,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:34:16,147 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-10-13 00:34:16,160 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:34:16,165 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-10-13 00:34:16,462 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-10-13 00:34:16,462 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-13 00:34:16,466 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-10-13 00:34:16,466 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-10-13 00:34:16,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:34:16,597 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-13 00:34:16,610 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:34:16,615 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-13 00:34:16,646 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-13 00:34:16,647 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-13 00:34:16,654 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-10-13 00:34:16,654 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-10-13 00:34:16,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:34:16,978 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-13 00:34:16,990 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:34:16,994 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-13 00:34:17,193 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-13 00:34:17,196 [ scc.git] DEBUG .gitignore | 1 +
2024-10-13 00:34:17,196 [ scc.git] DEBUG src/omero/plugins/download.py | 17 ++++++++++++-----
2024-10-13 00:34:17,196 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 5 deletions(-)
2024-10-13 00:34:17,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:34:17,366 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-13 00:34:17,380 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:34:17,384 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 431 (omero.HdfStorage.update: add size check on data.rowNumbers) 0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-13 00:34:17,403 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-13 00:34:17,406 [ scc.git] DEBUG src/omero/hdfstorageV2.py | 1 +
2024-10-13 00:34:17,406 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2024-10-13 00:34:17,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:34:17,753 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-13 00:34:17,795 [ scc.git] DEBUG Get sha1 of %s
2024-10-13 00:34:17,796 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:34:17,801 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-13 00:34:17,841 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-13 00:34:17,850 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fab44869c70> has no local changes
2024-10-13 00:34:17,850 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Generated by OMERO-python-superbuild-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/200/)'
2024-10-13 00:34:17,861 [ scc.git] DEBUG [detached HEAD bbe84008] merge master -Dorg -Ssuccess-only
2024-10-13 00:34:17,861 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-13 00:34:17,862 [ scc.git] INFO Overriding base-branch from master to develop
2024-10-13 00:34:17,862 [ scc.repo] DEBUG ## PRs found:
2024-10-13 00:34:18,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-10-13 00:34:18,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-10-13 00:34:19,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2024-10-13 00:34:19,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-13 00:34:20,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-13 00:34:20,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-13 00:34:21,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-13 00:34:21,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-10-13 00:34:21,558 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-13 00:34:21,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-10-13 00:34:22,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-10-13 00:34:22,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-10-13 00:34:23,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-10-13 00:34:23,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-10-13 00:34:24,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-10-13 00:34:24,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-13 00:34:25,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-13 00:34:25,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-13 00:34:26,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-10-13 00:34:26,171 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-13 00:34:26,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-10-13 00:34:27,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-10-13 00:34:27,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-10-13 00:34:28,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-10-13 00:34:28,003 [ scc.repo] DEBUG ## Branches found:
2024-10-13 00:34:28,003 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-13 00:34:28,003 [ scc.git] DEBUG Get sha1 of %s
2024-10-13 00:34:28,003 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:34:28,008 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-10-13 00:34:28,012 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-13 00:34:28,012 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-10-13 00:34:28,017 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-10-13 00:34:28,021 [ scc.git] DEBUG Already up to date.
2024-10-13 00:34:28,021 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-10-13 00:34:28,835 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-13 00:34:28,835 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-10-13 00:34:28,840 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-10-13 00:34:29,415 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-13 00:34:29,415 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-10-13 00:34:29,421 [ scc.git] DEBUG ## Unique users: []
2024-10-13 00:34:29,421 [ scc.git] DEBUG Get sha1 of %s
2024-10-13 00:34:29,421 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:34:29,425 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-13 00:34:29,431 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:34:29,435 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-13 00:34:29,527 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-10-13 00:34:29,527 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-10-13 00:34:29,527 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-10-13 00:34:29,527 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-10-13 00:34:29,532 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-13 00:34:29,538 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-13 00:34:29,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:34:29,671 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-13 00:34:29,677 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-13 00:34:29,682 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#200](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/200/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/200/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-10-13 00:34:29,685 [ scc.config] DEBUG Found github.token
2024-10-13 00:34:29,686 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-10-13 00:34:29,686 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-13 00:34:29,690 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:34:29,694 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-13 00:34:29,755 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-13 00:34:29,759 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-10-13 00:34:29,759 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-10-13 00:34:30,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:34:30,046 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-13 00:34:30,084 [ scc.git] DEBUG Get sha1 of %s
2024-10-13 00:34:30,084 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:34:30,088 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-13 00:34:30,125 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-13 00:34:30,131 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fab4487cbe0> has no local changes
2024-10-13 00:34:30,131 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/200/)'
2024-10-13 00:34:30,138 [ scc.git] DEBUG [detached HEAD 005ae8b] merge master -Dorg -Ssuccess-only
2024-10-13 00:34:30,138 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-13 00:34:30,138 [ scc.repo] DEBUG ## PRs found:
2024-10-13 00:34:30,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-10-13 00:34:31,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/585 HTTP/1.1" 200 None
2024-10-13 00:34:31,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583 HTTP/1.1" 200 None
2024-10-13 00:34:32,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-13 00:34:32,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-13 00:34:33,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-13 00:34:33,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-13 00:34:34,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/aa50f469842b9687c74df8765d72241e6e37d32c?per_page=1 HTTP/1.1" 200 None
2024-10-13 00:34:34,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-13 00:34:34,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/status HTTP/1.1" 200 None
2024-10-13 00:34:34,949 [ scc.repo] DEBUG - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-13 00:34:35,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581 HTTP/1.1" 200 None
2024-10-13 00:34:35,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581/comments HTTP/1.1" 200 None
2024-10-13 00:34:36,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/580 HTTP/1.1" 200 None
2024-10-13 00:34:36,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-13 00:34:37,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-13 00:34:37,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-13 00:34:38,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-13 00:34:38,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc?per_page=1 HTTP/1.1" 200 None
2024-10-13 00:34:39,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-13 00:34:39,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/status HTTP/1.1" 200 None
2024-10-13 00:34:39,467 [ scc.repo] DEBUG - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-13 00:34:39,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568 HTTP/1.1" 200 None
2024-10-13 00:34:40,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568/comments HTTP/1.1" 200 None
2024-10-13 00:34:40,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-10-13 00:34:41,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-10-13 00:34:41,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-10-13 00:34:42,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-10-13 00:34:42,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-13 00:34:43,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-13 00:34:43,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-13 00:34:44,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-13 00:34:44,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-10-13 00:34:44,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-13 00:34:45,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-10-13 00:34:45,372 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-13 00:34:45,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-10-13 00:34:46,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-10-13 00:34:46,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-13 00:34:47,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-13 00:34:47,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-13 00:34:48,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-13 00:34:48,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-10-13 00:34:49,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-13 00:34:49,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-10-13 00:34:49,590 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-13 00:34:50,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-10-13 00:34:50,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-10-13 00:34:50,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-10-13 00:34:51,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-13 00:34:51,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-13 00:34:51,931 [ scc.repo] DEBUG ## Branches found:
2024-10-13 00:34:51,931 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-13 00:34:51,932 [ scc.git] DEBUG Get sha1 of %s
2024-10-13 00:34:51,932 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:34:51,936 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-13 00:34:51,940 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-13 00:34:51,941 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-13 00:34:52,010 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-13 00:34:52,017 [ scc.git] DEBUG Already up to date.
2024-10-13 00:34:52,017 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-10-13 00:34:53,353 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-13 00:34:53,353 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-10-13 00:34:53,358 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-10-13 00:34:53,690 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-13 00:34:53,690 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-10-13 00:34:53,695 [ scc.git] DEBUG Calling 'git fetch origin pull/580/head'
2024-10-13 00:34:54,188 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-13 00:34:54,188 [ scc.git] DEBUG * branch refs/pull/580/head -> FETCH_HEAD
2024-10-13 00:34:54,193 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head'
2024-10-13 00:34:54,559 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-13 00:34:54,559 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD
2024-10-13 00:34:54,565 [ scc.git] DEBUG ## Unique users: []
2024-10-13 00:34:54,565 [ scc.git] DEBUG Get sha1 of %s
2024-10-13 00:34:54,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:34:54,569 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-13 00:34:54,576 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:34:54,580 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-13 00:34:54,678 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-10-13 00:34:54,678 [ scc.git] DEBUG Auto-merging setup.py
2024-10-13 00:34:54,680 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-13 00:34:54,684 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-10-13 00:34:54,684 [ scc.git] DEBUG setup.py | 1 +
2024-10-13 00:34:54,684 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-10-13 00:34:54,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:34:54,814 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-13 00:34:54,823 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:34:54,827 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-13 00:34:55,279 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-10-13 00:34:55,279 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-10-13 00:34:55,280 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-13 00:34:55,285 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-10-13 00:34:55,285 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-10-13 00:34:55,285 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-10-13 00:34:55,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:34:55,424 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-13 00:34:55,433 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:34:55,437 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 580 (omeroweb.webgateway.obj_id_bitmask: handle empty query results) 1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-13 00:34:55,589 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-13 00:34:55,594 [ scc.git] DEBUG omeroweb/webgateway/views.py | 6 ++++++
2024-10-13 00:34:55,594 [ scc.git] DEBUG 1 file changed, 6 insertions(+)
2024-10-13 00:34:55,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:34:55,815 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-13 00:34:55,824 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:34:55,828 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Allow users to click a group name to show data from all users in that group) aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-13 00:34:55,901 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-13 00:34:55,904 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_content.html | 6 +++++-
2024-10-13 00:34:55,905 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_dropdown2.html | 2 --
2024-10-13 00:34:55,905 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 3 deletions(-)
2024-10-13 00:34:56,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:34:56,195 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-13 00:34:56,235 [ scc.git] DEBUG Get sha1 of %s
2024-10-13 00:34:56,235 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-13 00:34:56,239 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-13 00:34:56,277 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-13 00:34:56,288 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fab377c6fa0> has no local changes
2024-10-13 00:34:56,288 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
Generated by OMERO-python-superbuild-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/200/)'
2024-10-13 00:34:56,298 [ scc.git] DEBUG [detached HEAD b54197f99] merge master -Dorg -Ssuccess-only
2024-10-13 00:34:56,299 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-13 00:34:56,299 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-13 00:34:56,350 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-10-13 00:34:56,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:34:56,583 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-10-13 00:34:56,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:34:56,964 [ scc.config] DEBUG Found submodule.omero-py.url
2024-10-13 00:34:57,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:34:57,350 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-10-13 00:34:57,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:34:57,752 [ scc.config] DEBUG Found submodule.omero-web.url
2024-10-13 00:34:58,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-13 00:34:58,121 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-13 00:34:58,146 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fab45b6afd0> has local changes
2024-10-13 00:34:58,146 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
Generated by OMERO-python-superbuild-push#200 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/200/)'
2024-10-13 00:34:58,155 [ scc.git] DEBUG [detached HEAD eac3651] merge master -Dorg -Ssuccess-only
2024-10-13 00:34:58,155 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-13 00:34:58,155 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-10-13 00:34:58,155 [ scc.merge] INFO Already up to date.
2024-10-13 00:34:58,155 [ scc.merge] INFO
2024-10-13 00:34:58,155 [ scc.merge] INFO Merged PRs:
2024-10-13 00:34:58,155 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-13 00:34:58,155 [ scc.merge] INFO
2024-10-13 00:34:58,155 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-10-13 00:34:58,155 [ scc.merge] INFO Already up to date.
2024-10-13 00:34:58,155 [ scc.merge] INFO
2024-10-13 00:34:58,155 [ scc.merge] INFO Merged PRs:
2024-10-13 00:34:58,156 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-13 00:34:58,156 [ scc.merge] INFO
2024-10-13 00:34:58,156 [ scc.merge] INFO Repository: ome/omero-marshal
2024-10-13 00:34:58,156 [ scc.merge] INFO Excluded PRs:
2024-10-13 00:34:58,156 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-10-13 00:34:58,156 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-10-13 00:34:58,156 [ scc.merge] INFO Already up to date.
2024-10-13 00:34:58,156 [ scc.merge] INFO
2024-10-13 00:34:58,156 [ scc.merge] INFO Merged PRs:
2024-10-13 00:34:58,156 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-13 00:34:58,156 [ scc.merge] INFO
2024-10-13 00:34:58,156 [ scc.merge] INFO Repository: ome/omero-py
2024-10-13 00:34:58,156 [ scc.merge] INFO Excluded PRs:
2024-10-13 00:34:58,156 [ scc.merge] INFO - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
2024-10-13 00:34:58,156 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-10-13 00:34:58,156 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-10-13 00:34:58,156 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-10-13 00:34:58,156 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-10-13 00:34:58,156 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-10-13 00:34:58,156 [ scc.merge] INFO Already up to date.
2024-10-13 00:34:58,156 [ scc.merge] INFO
2024-10-13 00:34:58,156 [ scc.merge] INFO Merged PRs:
2024-10-13 00:34:58,156 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-10-13 00:34:58,156 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-13 00:34:58,156 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-13 00:34:58,156 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-13 00:34:58,156 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-10-13 00:34:58,156 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-13 00:34:58,156 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-10-13 00:34:58,156 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-10-13 00:34:58,156 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation'
2024-10-13 00:34:58,156 [ scc.merge] INFO - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-13 00:34:58,156 [ scc.merge] INFO
2024-10-13 00:34:58,156 [ scc.merge] INFO Repository: ome/omero-scripts
2024-10-13 00:34:58,157 [ scc.merge] INFO Excluded PRs:
2024-10-13 00:34:58,157 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-10-13 00:34:58,157 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-10-13 00:34:58,157 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-10-13 00:34:58,157 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-10-13 00:34:58,157 [ scc.merge] INFO Already up to date.
2024-10-13 00:34:58,157 [ scc.merge] INFO
2024-10-13 00:34:58,157 [ scc.merge] INFO Merged PRs:
2024-10-13 00:34:58,157 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-13 00:34:58,157 [ scc.merge] INFO
2024-10-13 00:34:58,157 [ scc.merge] INFO Conflicting PRs (not included):
2024-10-13 00:34:58,157 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-13 00:34:58,157 [ scc.merge] INFO
2024-10-13 00:34:58,157 [ scc.merge] INFO Repository: ome/omero-web
2024-10-13 00:34:58,157 [ scc.merge] INFO Excluded PRs:
2024-10-13 00:34:58,157 [ scc.merge] INFO - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-10-13 00:34:58,157 [ scc.merge] INFO - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
2024-10-13 00:34:58,157 [ scc.merge] INFO - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
2024-10-13 00:34:58,157 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-10-13 00:34:58,157 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-10-13 00:34:58,157 [ scc.merge] INFO Already up to date.
2024-10-13 00:34:58,157 [ scc.merge] INFO
2024-10-13 00:34:58,157 [ scc.merge] INFO Merged PRs:
2024-10-13 00:34:58,157 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-13 00:34:58,157 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-13 00:34:58,157 [ scc.merge] INFO - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-13 00:34:58,157 [ scc.merge] INFO - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-13 00:34:58,157 [ scc.merge] INFO
2024-10-13 00:34:58,157 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-13 00:34:58,157 [ scc.git] DEBUG Calling 'git remote'
2024-10-13 00:34:58,161 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-13 00:34:58,161 [ scc.git] DEBUG Calling 'git remote'
2024-10-13 00:34:58,165 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-13 00:34:58,165 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-13 00:34:58,165 [ scc.git] DEBUG Calling 'git remote'
2024-10-13 00:34:58,169 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-13 00:34:58,169 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-13 00:34:58,169 [ scc.git] DEBUG Calling 'git remote'
2024-10-13 00:34:58,172 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-13 00:34:58,173 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-13 00:34:58,173 [ scc.git] DEBUG Calling 'git remote'
2024-10-13 00:34:58,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-13 00:34:58,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-13 00:34:58,177 [ scc.git] DEBUG Calling 'git remote'
2024-10-13 00:34:58,180 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 4fd72efa
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from da5b7d11f
nothing to commit, working tree clean
HEAD detached from e849d72
nothing to commit, working tree clean
2024-10-13 00:35:26,228 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
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