Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-10-14 00:39:52,187 [ scc.config] DEBUG Found github.token
2024-10-14 00:39:52,190 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-14 00:39:52,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:39:52,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:39:53,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-14 00:39:53,143 [ scc.gh] DEBUG 4620 remaining from 5000 (Reset at 01:10
2024-10-14 00:39:53,144 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-14 00:39:53,148 [ scc.git] DEBUG Check current status
2024-10-14 00:39:53,148 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-14 00:39:53,151 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-14 00:39:53,151 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-14 00:39:53,192 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-14 00:39:53,195 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-14 00:39:53,198 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-14 00:39:53,202 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-14 00:39:53,206 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-14 00:39:53,210 [ scc.config] DEBUG Found remote.origin.url
2024-10-14 00:39:53,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-14 00:39:54,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-14 00:39:54,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-14 00:39:54,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-14 00:39:55,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-14 00:39:55,209 [ scc.git] DEBUG Resetting...
2024-10-14 00:39:55,209 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-14 00:39:55,216 [ scc.git] DEBUG HEAD is now at e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-14 00:39:55,217 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-14 00:39:55,271 [ scc.git] DEBUG Check current status
2024-10-14 00:39:55,271 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-14 00:39:55,275 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-14 00:39:55,275 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-14 00:39:55,315 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-14 00:39:55,318 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-14 00:39:55,322 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-14 00:39:55,325 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-14 00:39:55,329 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-14 00:39:55,330 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-14 00:39:55,330 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-14 00:39:55,330 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-14 00:39:55,330 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-14 00:39:55,331 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-14 00:39:55,331 [ scc.repo] DEBUG ## PRs found:
2024-10-14 00:39:55,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-14 00:39:56,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-14 00:39:56,124 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-14 00:39:56,124 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-14 00:39:56,124 [ scc.repo] DEBUG ## Branches found:
2024-10-14 00:39:56,124 [ scc.git] DEBUG Get sha1 of %s
2024-10-14 00:39:56,124 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:39:56,128 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-14 00:39:56,131 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-14 00:39:56,131 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-14 00:39:56,135 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-14 00:39:56,139 [ scc.git] DEBUG Already up to date.
2024-10-14 00:39:56,139 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-14 00:39:56,492 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-14 00:39:56,492 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-14 00:39:56,497 [ scc.git] DEBUG ## Unique users: []
2024-10-14 00:39:56,497 [ scc.git] DEBUG Get sha1 of %s
2024-10-14 00:39:56,497 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:39:56,501 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-14 00:39:56,505 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:39:56,509 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-14 00:39:56,518 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-14 00:39:56,520 [ scc.git] DEBUG omero-py | 2 +-
2024-10-14 00:39:56,520 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-10-14 00:39:56,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:39:56,659 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-14 00:39:56,875 [ scc.git] DEBUG Submodule path 'omero-py': checked out '4fd72efaa8cdbec9da98e1d28678af16878a86ba'
2024-10-14 00:39:56,876 [ scc.git] DEBUG Get sha1 of %s
2024-10-14 00:39:56,876 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:39:56,880 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-14 00:39:57,584 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f59f00d7fd0> has no local changes
2024-10-14 00:39:57,584 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Generated by OMERO-python-superbuild-push#201 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/201/)'
2024-10-14 00:39:57,612 [ scc.git] DEBUG [detached HEAD 096f3dc] merge master -Dorg -Snone
2024-10-14 00:39:57,613 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-14 00:39:57,613 [ scc.merge] INFO Already up to date.
2024-10-14 00:39:57,613 [ scc.merge] INFO
2024-10-14 00:39:57,613 [ scc.merge] INFO Merged PRs:
2024-10-14 00:39:57,613 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-14 00:39:57,613 [ scc.merge] INFO
2024-10-14 00:39:57,613 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-14 00:39:57,613 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-14 00:40:00,156 [ scc.config] DEBUG Found github.token
2024-10-14 00:40:00,159 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-14 00:40:00,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:40:00,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:40:01,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-14 00:40:01,105 [ scc.gh] DEBUG 4610 remaining from 5000 (Reset at 01:10
2024-10-14 00:40:01,106 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-14 00:40:01,110 [ scc.git] DEBUG Check current status
2024-10-14 00:40:01,110 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-14 00:40:01,114 [ scc.git] DEBUG 096f3dc merge master -Dorg -Snone
2024-10-14 00:40:01,114 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-14 00:40:01,155 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-14 00:40:01,157 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-14 00:40:01,161 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-14 00:40:01,165 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-14 00:40:01,168 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-14 00:40:01,173 [ scc.config] DEBUG Found remote.origin.url
2024-10-14 00:40:01,174 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-10-14 00:40:01,175 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-14 00:40:01,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-14 00:40:02,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-14 00:40:02,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-14 00:40:02,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-14 00:40:03,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-14 00:40:03,285 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-14 00:40:03,333 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-14 00:40:03,333 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-14 00:40:03,338 [ scc.git] DEBUG Check current status
2024-10-14 00:40:03,338 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-14 00:40:03,342 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-10-14 00:40:03,342 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-14 00:40:03,384 [ scc.config] DEBUG Found remote.origin.url
2024-10-14 00:40:03,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-10-14 00:40:04,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-14 00:40:04,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-14 00:40:05,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-14 00:40:05,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-14 00:40:05,423 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-14 00:40:05,481 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-14 00:40:05,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-14 00:40:05,483 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-14 00:40:05,488 [ scc.git] DEBUG Check current status
2024-10-14 00:40:05,489 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-14 00:40:05,494 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-10-14 00:40:05,494 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-14 00:40:05,549 [ scc.config] DEBUG Found remote.origin.url
2024-10-14 00:40:05,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-10-14 00:40:06,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-14 00:40:06,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-14 00:40:07,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-14 00:40:07,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-14 00:40:07,607 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-14 00:40:07,649 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-14 00:40:07,649 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-14 00:40:07,649 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-14 00:40:07,654 [ scc.git] DEBUG Check current status
2024-10-14 00:40:07,654 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-14 00:40:07,659 [ scc.git] DEBUG 4fd72efa Bump version: 5.19.5 → 5.19.6.dev0
2024-10-14 00:40:07,659 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-14 00:40:07,704 [ scc.config] DEBUG Found remote.origin.url
2024-10-14 00:40:08,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-10-14 00:40:08,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-14 00:40:08,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-14 00:40:09,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-14 00:40:09,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-14 00:40:09,771 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-14 00:40:09,811 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-14 00:40:09,812 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-14 00:40:09,812 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-14 00:40:09,816 [ scc.git] DEBUG Check current status
2024-10-14 00:40:09,816 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-14 00:40:10,135 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-14 00:40:10,136 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-14 00:40:10,182 [ scc.config] DEBUG Found remote.origin.url
2024-10-14 00:40:10,182 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-10-14 00:40:10,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-10-14 00:40:10,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-14 00:40:11,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-14 00:40:11,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-14 00:40:12,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-14 00:40:12,095 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-14 00:40:12,134 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-14 00:40:12,135 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-14 00:40:12,135 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-14 00:40:12,139 [ scc.git] DEBUG Check current status
2024-10-14 00:40:12,139 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-14 00:40:12,154 [ scc.git] DEBUG da5b7d11f Bump version: 5.27.2 → 5.27.3.dev0
2024-10-14 00:40:12,155 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-14 00:40:12,196 [ scc.config] DEBUG Found remote.origin.url
2024-10-14 00:40:12,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-10-14 00:40:13,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-14 00:40:13,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-14 00:40:13,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-14 00:40:14,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-14 00:40:14,203 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-14 00:40:14,243 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-14 00:40:14,243 [ scc.git] DEBUG Resetting...
2024-10-14 00:40:14,243 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-14 00:40:14,249 [ scc.git] DEBUG HEAD is now at 096f3dc merge master -Dorg -Snone
2024-10-14 00:40:14,250 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-14 00:40:14,307 [ scc.git] DEBUG Check current status
2024-10-14 00:40:14,307 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-14 00:40:14,311 [ scc.git] DEBUG 096f3dc merge master -Dorg -Snone
2024-10-14 00:40:14,311 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-14 00:40:14,351 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-14 00:40:14,353 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-14 00:40:14,357 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-14 00:40:14,361 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-14 00:40:14,364 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-14 00:40:14,365 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-14 00:40:14,365 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-14 00:40:14,365 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-14 00:40:14,365 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-14 00:40:14,366 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-14 00:40:14,366 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-10-14 00:40:14,366 [ scc.repo] DEBUG ## PRs found:
2024-10-14 00:40:14,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-14 00:40:15,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-14 00:40:15,182 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-14 00:40:15,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-14 00:40:16,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-14 00:40:16,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-14 00:40:17,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/9660559833988d271074de56e54f2462a7be74e9?per_page=1 HTTP/1.1" 200 2
2024-10-14 00:40:17,180 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-14 00:40:17,180 [ scc.repo] DEBUG ## Branches found:
2024-10-14 00:40:17,180 [ scc.git] DEBUG Get sha1 of %s
2024-10-14 00:40:17,181 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:40:17,185 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-14 00:40:17,190 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-14 00:40:17,190 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-14 00:40:17,194 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-14 00:40:17,198 [ scc.git] DEBUG Already up to date.
2024-10-14 00:40:17,199 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-14 00:40:17,513 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-14 00:40:17,513 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-14 00:40:17,518 [ scc.git] DEBUG ## Unique users: []
2024-10-14 00:40:17,518 [ scc.git] DEBUG Get sha1 of %s
2024-10-14 00:40:17,519 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:40:17,523 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-14 00:40:17,529 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:40:17,533 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-14 00:40:17,537 [ scc.git] DEBUG Already up to date.
2024-10-14 00:40:17,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:40:17,667 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-14 00:40:17,710 [ scc.git] DEBUG Get sha1 of %s
2024-10-14 00:40:17,710 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:40:17,714 [ scc.repo] DEBUG ## PRs found:
2024-10-14 00:40:18,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-10-14 00:40:18,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-10-14 00:40:19,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-10-14 00:40:19,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-14 00:40:20,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-14 00:40:20,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-14 00:40:20,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-10-14 00:40:20,968 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-14 00:40:20,968 [ scc.repo] DEBUG ## Branches found:
2024-10-14 00:40:20,968 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-14 00:40:20,968 [ scc.git] DEBUG Get sha1 of %s
2024-10-14 00:40:20,968 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:40:20,973 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-14 00:40:20,977 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-14 00:40:20,977 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-14 00:40:20,981 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-14 00:40:20,986 [ scc.git] DEBUG Already up to date.
2024-10-14 00:40:20,986 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-10-14 00:40:21,316 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-10-14 00:40:21,316 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-10-14 00:40:21,321 [ scc.git] DEBUG ## Unique users: []
2024-10-14 00:40:21,321 [ scc.git] DEBUG Get sha1 of %s
2024-10-14 00:40:21,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:40:21,326 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-14 00:40:21,331 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:40:21,334 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-14 00:40:22,013 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-10-14 00:40:22,013 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-10-14 00:40:22,013 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-10-14 00:40:22,013 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-10-14 00:40:22,013 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-10-14 00:40:22,013 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-10-14 00:40:22,013 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-10-14 00:40:22,013 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-10-14 00:40:22,013 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-10-14 00:40:22,014 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-14 00:40:22,019 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-10-14 00:40:22,019 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-10-14 00:40:22,019 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-10-14 00:40:22,019 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-10-14 00:40:22,019 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-10-14 00:40:22,019 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-10-14 00:40:22,019 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-10-14 00:40:22,019 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-10-14 00:40:22,019 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-10-14 00:40:22,019 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-10-14 00:40:22,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:40:22,156 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-14 00:40:22,196 [ scc.git] DEBUG Get sha1 of %s
2024-10-14 00:40:22,197 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:40:22,201 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-14 00:40:22,239 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-14 00:40:22,246 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f491a6ae790> has no local changes
2024-10-14 00:40:22,247 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#201 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/201/)'
2024-10-14 00:40:22,256 [ scc.git] DEBUG [detached HEAD 8449aa7] merge master -Dorg -Ssuccess-only
2024-10-14 00:40:22,256 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-14 00:40:22,256 [ scc.repo] DEBUG ## PRs found:
2024-10-14 00:40:22,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-10-14 00:40:23,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-10-14 00:40:23,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-10-14 00:40:24,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-14 00:40:24,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-14 00:40:25,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-14 00:40:25,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-10-14 00:40:25,408 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-14 00:40:25,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-10-14 00:40:26,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-10-14 00:40:26,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-10-14 00:40:27,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-10-14 00:40:27,171 [ scc.repo] DEBUG ## Branches found:
2024-10-14 00:40:27,171 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-14 00:40:27,171 [ scc.git] DEBUG Get sha1 of %s
2024-10-14 00:40:27,171 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:40:27,176 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-14 00:40:27,181 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-14 00:40:27,181 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-14 00:40:27,185 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-14 00:40:27,191 [ scc.git] DEBUG Already up to date.
2024-10-14 00:40:27,191 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-10-14 00:40:27,522 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-10-14 00:40:27,522 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-10-14 00:40:27,527 [ scc.git] DEBUG ## Unique users: []
2024-10-14 00:40:27,527 [ scc.git] DEBUG Get sha1 of %s
2024-10-14 00:40:27,527 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:40:27,532 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-14 00:40:27,537 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:40:27,541 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-14 00:40:27,551 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-10-14 00:40:27,551 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-14 00:40:27,554 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-10-14 00:40:27,554 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-10-14 00:40:27,554 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-10-14 00:40:27,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:40:27,685 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-14 00:40:27,725 [ scc.git] DEBUG Get sha1 of %s
2024-10-14 00:40:27,726 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:40:27,730 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-14 00:40:27,770 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-14 00:40:27,776 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f491a6e8730> has no local changes
2024-10-14 00:40:27,777 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#201 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/201/)'
2024-10-14 00:40:27,785 [ scc.git] DEBUG [detached HEAD d483c1c] merge master -Dorg -Ssuccess-only
2024-10-14 00:40:27,785 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-14 00:40:27,785 [ scc.repo] DEBUG ## PRs found:
2024-10-14 00:40:28,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-10-14 00:40:28,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/431 HTTP/1.1" 200 None
2024-10-14 00:40:29,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-14 00:40:29,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-14 00:40:30,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-14 00:40:30,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-14 00:40:31,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0e500ec05bf9227b66b28a480b40e0936241d953?per_page=1 HTTP/1.1" 200 None
2024-10-14 00:40:31,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-14 00:40:32,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/status HTTP/1.1" 200 None
2024-10-14 00:40:32,027 [ scc.repo] DEBUG - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-14 00:40:32,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None
2024-10-14 00:40:32,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None
2024-10-14 00:40:33,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None
2024-10-14 00:40:33,392 [ scc.repo] DEBUG # ... Include label: include
2024-10-14 00:40:33,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-14 00:40:34,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-14 00:40:34,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-14 00:40:35,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-14 00:40:35,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1?per_page=1 HTTP/1.1" 200 None
2024-10-14 00:40:36,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-14 00:40:36,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/status HTTP/1.1" 200 None
2024-10-14 00:40:36,550 [ scc.repo] DEBUG - PR 427 Rdornier 'Add fileset folder creation'
2024-10-14 00:40:36,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-10-14 00:40:37,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-10-14 00:40:37,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-14 00:40:38,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-14 00:40:38,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-14 00:40:39,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-14 00:40:39,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-10-14 00:40:40,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-14 00:40:40,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-10-14 00:40:40,685 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-10-14 00:40:41,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-10-14 00:40:41,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-10-14 00:40:42,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-10-14 00:40:42,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-14 00:40:42,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-14 00:40:43,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-10-14 00:40:43,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-14 00:40:44,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-14 00:40:44,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-14 00:40:45,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-14 00:40:45,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-10-14 00:40:46,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-14 00:40:46,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-10-14 00:40:46,733 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-10-14 00:40:47,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-10-14 00:40:47,194 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-10-14 00:40:47,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-10-14 00:40:48,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-10-14 00:40:48,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-14 00:40:49,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-14 00:40:49,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-14 00:40:49,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-10-14 00:40:49,857 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-14 00:40:50,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-10-14 00:40:50,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-10-14 00:40:51,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-14 00:40:51,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-14 00:40:52,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-14 00:40:52,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-14 00:40:53,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-10-14 00:40:53,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-14 00:40:54,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-10-14 00:40:54,002 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-10-14 00:40:54,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-10-14 00:40:54,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-10-14 00:40:55,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-10-14 00:40:55,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-10-14 00:40:56,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-14 00:40:56,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-14 00:40:57,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-14 00:40:57,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-10-14 00:40:57,655 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-14 00:40:58,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-10-14 00:40:58,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-14 00:40:59,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-14 00:40:59,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-14 00:40:59,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-10-14 00:40:59,906 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-14 00:41:00,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-10-14 00:41:00,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-10-14 00:41:01,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-14 00:41:01,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-14 00:41:02,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-14 00:41:02,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-10-14 00:41:02,639 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-14 00:41:03,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-10-14 00:41:03,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-10-14 00:41:04,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-14 00:41:04,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-14 00:41:05,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-14 00:41:05,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-10-14 00:41:05,400 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-10-14 00:41:05,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-10-14 00:41:06,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-10-14 00:41:06,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-10-14 00:41:07,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-10-14 00:41:07,226 [ scc.repo] DEBUG ## Branches found:
2024-10-14 00:41:07,227 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-14 00:41:07,227 [ scc.git] DEBUG Get sha1 of %s
2024-10-14 00:41:07,227 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:41:07,234 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-14 00:41:07,238 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-14 00:41:07,238 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-14 00:41:07,242 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-14 00:41:07,247 [ scc.git] DEBUG Already up to date.
2024-10-14 00:41:07,247 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-10-14 00:41:07,570 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-14 00:41:07,570 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-10-14 00:41:07,575 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-10-14 00:41:07,870 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-14 00:41:07,870 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-10-14 00:41:07,875 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-10-14 00:41:08,224 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-14 00:41:08,224 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-10-14 00:41:08,229 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-10-14 00:41:08,531 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-14 00:41:08,532 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-10-14 00:41:08,537 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-10-14 00:41:08,894 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-14 00:41:08,894 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-10-14 00:41:08,899 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-10-14 00:41:09,195 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-14 00:41:09,195 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-10-14 00:41:09,200 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-10-14 00:41:09,495 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-14 00:41:09,495 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-10-14 00:41:09,499 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-10-14 00:41:09,793 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-14 00:41:09,793 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-10-14 00:41:09,798 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head'
2024-10-14 00:41:10,412 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-14 00:41:10,412 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD
2024-10-14 00:41:10,419 [ scc.git] DEBUG Calling 'git fetch origin pull/431/head'
2024-10-14 00:41:10,716 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-14 00:41:10,716 [ scc.git] DEBUG * branch refs/pull/431/head -> FETCH_HEAD
2024-10-14 00:41:10,721 [ scc.git] DEBUG ## Unique users: []
2024-10-14 00:41:10,721 [ scc.git] DEBUG Get sha1 of %s
2024-10-14 00:41:10,721 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:41:10,725 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-14 00:41:10,735 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:41:10,740 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-14 00:41:10,762 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-10-14 00:41:10,762 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-10-14 00:41:10,763 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-14 00:41:10,767 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-10-14 00:41:10,767 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-10-14 00:41:10,767 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-10-14 00:41:10,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:41:10,900 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-14 00:41:10,913 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:41:10,918 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-14 00:41:11,206 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-14 00:41:11,207 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-10-14 00:41:11,207 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-14 00:41:11,215 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-10-14 00:41:11,215 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-10-14 00:41:11,215 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-10-14 00:41:11,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:41:11,360 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-14 00:41:11,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:41:11,379 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-14 00:41:11,400 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-10-14 00:41:11,401 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-14 00:41:11,404 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-10-14 00:41:11,404 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-10-14 00:41:11,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:41:11,749 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-14 00:41:11,762 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:41:11,767 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-14 00:41:11,951 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-10-14 00:41:11,951 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-10-14 00:41:11,952 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-14 00:41:11,956 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-10-14 00:41:11,956 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-10-14 00:41:11,956 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-10-14 00:41:12,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:41:12,127 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-14 00:41:12,141 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:41:12,146 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-14 00:41:12,167 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-14 00:41:12,170 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-10-14 00:41:12,170 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-10-14 00:41:12,170 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-10-14 00:41:12,170 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-10-14 00:41:12,170 [ scc.git] DEBUG create mode 100644 connect.py
2024-10-14 00:41:12,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:41:12,504 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-14 00:41:12,517 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:41:12,522 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-14 00:41:12,582 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-10-14 00:41:12,628 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-14 00:41:12,631 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-10-14 00:41:12,631 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-10-14 00:41:12,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:41:12,890 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-10-14 00:41:12,902 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:41:12,906 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-10-14 00:41:12,926 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-10-14 00:41:12,999 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-14 00:41:13,003 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-10-14 00:41:13,003 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-10-14 00:41:13,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:41:13,276 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-14 00:41:13,288 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:41:13,293 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-14 00:41:13,505 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-14 00:41:13,505 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-14 00:41:13,512 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-10-14 00:41:13,512 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-10-14 00:41:13,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:41:13,661 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-14 00:41:13,673 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:41:13,677 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-14 00:41:13,702 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-14 00:41:13,705 [ scc.git] DEBUG .gitignore | 1 +
2024-10-14 00:41:13,705 [ scc.git] DEBUG src/omero/plugins/download.py | 17 ++++++++++++-----
2024-10-14 00:41:13,705 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 5 deletions(-)
2024-10-14 00:41:14,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:41:14,047 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-14 00:41:14,059 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:41:14,064 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 431 (omero.HdfStorage.update: add size check on data.rowNumbers) 0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-14 00:41:14,104 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-14 00:41:14,108 [ scc.git] DEBUG src/omero/hdfstorageV2.py | 1 +
2024-10-14 00:41:14,108 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2024-10-14 00:41:14,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:41:14,532 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-14 00:41:14,578 [ scc.git] DEBUG Get sha1 of %s
2024-10-14 00:41:14,579 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:41:14,587 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-14 00:41:14,632 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-14 00:41:14,641 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f491963ec70> has no local changes
2024-10-14 00:41:14,641 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Generated by OMERO-python-superbuild-push#201 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/201/)'
2024-10-14 00:41:14,653 [ scc.git] DEBUG [detached HEAD fd8196c2] merge master -Dorg -Ssuccess-only
2024-10-14 00:41:14,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-14 00:41:14,654 [ scc.git] INFO Overriding base-branch from master to develop
2024-10-14 00:41:14,654 [ scc.repo] DEBUG ## PRs found:
2024-10-14 00:41:15,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-10-14 00:41:15,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-10-14 00:41:16,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2024-10-14 00:41:16,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-14 00:41:17,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-14 00:41:17,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-14 00:41:17,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-14 00:41:18,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-10-14 00:41:18,397 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-14 00:41:18,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-10-14 00:41:19,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-10-14 00:41:19,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-10-14 00:41:20,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-10-14 00:41:20,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-10-14 00:41:21,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-10-14 00:41:21,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-14 00:41:22,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-14 00:41:22,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-14 00:41:23,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-10-14 00:41:23,110 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-14 00:41:23,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-10-14 00:41:24,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-10-14 00:41:24,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-10-14 00:41:25,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-10-14 00:41:25,039 [ scc.repo] DEBUG ## Branches found:
2024-10-14 00:41:25,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-14 00:41:25,039 [ scc.git] DEBUG Get sha1 of %s
2024-10-14 00:41:25,039 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:41:25,044 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-10-14 00:41:25,048 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-14 00:41:25,048 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-10-14 00:41:25,053 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-10-14 00:41:25,058 [ scc.git] DEBUG Already up to date.
2024-10-14 00:41:25,058 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-10-14 00:41:25,392 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-14 00:41:25,392 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-10-14 00:41:25,397 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-10-14 00:41:25,724 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-14 00:41:25,724 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-10-14 00:41:25,729 [ scc.git] DEBUG ## Unique users: []
2024-10-14 00:41:25,729 [ scc.git] DEBUG Get sha1 of %s
2024-10-14 00:41:25,729 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:41:25,735 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-14 00:41:25,741 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:41:25,746 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-14 00:41:25,831 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-10-14 00:41:25,831 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-10-14 00:41:25,831 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-10-14 00:41:25,831 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-10-14 00:41:25,838 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-14 00:41:25,844 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-14 00:41:25,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:41:25,979 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-14 00:41:25,986 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-14 00:41:25,992 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#201](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/201/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/201/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-10-14 00:41:25,995 [ scc.config] DEBUG Found github.token
2024-10-14 00:41:25,996 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-10-14 00:41:25,996 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-14 00:41:26,001 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:41:26,005 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-14 00:41:26,013 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-14 00:41:26,015 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-10-14 00:41:26,015 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-10-14 00:41:26,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:41:26,363 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-14 00:41:26,401 [ scc.git] DEBUG Get sha1 of %s
2024-10-14 00:41:26,402 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:41:26,407 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-14 00:41:26,442 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-14 00:41:26,448 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4919650be0> has no local changes
2024-10-14 00:41:26,448 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#201 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/201/)'
2024-10-14 00:41:26,455 [ scc.git] DEBUG [detached HEAD efbcdd2] merge master -Dorg -Ssuccess-only
2024-10-14 00:41:26,455 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-14 00:41:26,455 [ scc.repo] DEBUG ## PRs found:
2024-10-14 00:41:26,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-10-14 00:41:27,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/585 HTTP/1.1" 200 None
2024-10-14 00:41:27,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583 HTTP/1.1" 200 None
2024-10-14 00:41:28,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-14 00:41:28,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-14 00:41:29,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-14 00:41:29,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-14 00:41:30,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/aa50f469842b9687c74df8765d72241e6e37d32c?per_page=1 HTTP/1.1" 200 None
2024-10-14 00:41:30,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-14 00:41:31,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/status HTTP/1.1" 200 None
2024-10-14 00:41:31,155 [ scc.repo] DEBUG - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-14 00:41:31,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581 HTTP/1.1" 200 None
2024-10-14 00:41:32,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581/comments HTTP/1.1" 200 None
2024-10-14 00:41:32,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/580 HTTP/1.1" 200 None
2024-10-14 00:41:33,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-14 00:41:33,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-14 00:41:34,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-14 00:41:34,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-14 00:41:34,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc?per_page=1 HTTP/1.1" 200 None
2024-10-14 00:41:35,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-14 00:41:35,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/status HTTP/1.1" 200 None
2024-10-14 00:41:35,817 [ scc.repo] DEBUG - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-14 00:41:36,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568 HTTP/1.1" 200 None
2024-10-14 00:41:36,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568/comments HTTP/1.1" 200 None
2024-10-14 00:41:37,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-10-14 00:41:37,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-10-14 00:41:38,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-10-14 00:41:38,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-10-14 00:41:39,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-14 00:41:39,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-14 00:41:40,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-14 00:41:40,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-14 00:41:40,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-10-14 00:41:41,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-14 00:41:41,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-10-14 00:41:41,683 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-14 00:41:42,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-10-14 00:41:42,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-10-14 00:41:43,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-14 00:41:43,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-14 00:41:44,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-14 00:41:44,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-14 00:41:45,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-10-14 00:41:45,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-14 00:41:45,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-10-14 00:41:45,849 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-14 00:41:46,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-10-14 00:41:46,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-10-14 00:41:47,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-10-14 00:41:47,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-14 00:41:48,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-14 00:41:48,207 [ scc.repo] DEBUG ## Branches found:
2024-10-14 00:41:48,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-14 00:41:48,207 [ scc.git] DEBUG Get sha1 of %s
2024-10-14 00:41:48,207 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:41:48,213 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-14 00:41:48,218 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-14 00:41:48,218 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-14 00:41:48,223 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-14 00:41:48,228 [ scc.git] DEBUG Already up to date.
2024-10-14 00:41:48,228 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-10-14 00:41:48,699 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-14 00:41:48,700 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-10-14 00:41:48,705 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-10-14 00:41:49,031 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-14 00:41:49,031 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-10-14 00:41:49,036 [ scc.git] DEBUG Calling 'git fetch origin pull/580/head'
2024-10-14 00:41:49,413 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-14 00:41:49,414 [ scc.git] DEBUG * branch refs/pull/580/head -> FETCH_HEAD
2024-10-14 00:41:49,419 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head'
2024-10-14 00:41:49,713 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-14 00:41:49,714 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD
2024-10-14 00:41:49,719 [ scc.git] DEBUG ## Unique users: []
2024-10-14 00:41:49,719 [ scc.git] DEBUG Get sha1 of %s
2024-10-14 00:41:49,719 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:41:49,724 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-14 00:41:49,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:41:49,737 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-14 00:41:49,754 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-10-14 00:41:49,754 [ scc.git] DEBUG Auto-merging setup.py
2024-10-14 00:41:49,756 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-14 00:41:49,759 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-10-14 00:41:49,759 [ scc.git] DEBUG setup.py | 1 +
2024-10-14 00:41:49,759 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-10-14 00:41:49,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:41:49,894 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-14 00:41:49,902 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:41:49,906 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-14 00:41:49,929 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-10-14 00:41:49,929 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-10-14 00:41:49,930 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-14 00:41:49,934 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-10-14 00:41:49,934 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-10-14 00:41:49,934 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-10-14 00:41:50,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:41:50,271 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-14 00:41:50,279 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:41:50,284 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 580 (omeroweb.webgateway.obj_id_bitmask: handle empty query results) 1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-14 00:41:50,501 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-14 00:41:50,506 [ scc.git] DEBUG omeroweb/webgateway/views.py | 6 ++++++
2024-10-14 00:41:50,506 [ scc.git] DEBUG 1 file changed, 6 insertions(+)
2024-10-14 00:41:50,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:41:50,654 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-14 00:41:50,663 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:41:50,667 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Allow users to click a group name to show data from all users in that group) aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-14 00:41:50,699 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-14 00:41:50,702 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_content.html | 6 +++++-
2024-10-14 00:41:50,702 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_dropdown2.html | 2 --
2024-10-14 00:41:50,702 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 3 deletions(-)
2024-10-14 00:41:51,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:41:51,038 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-14 00:41:51,076 [ scc.git] DEBUG Get sha1 of %s
2024-10-14 00:41:51,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-14 00:41:51,081 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-14 00:41:51,118 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-14 00:41:51,128 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f49185a1fa0> has no local changes
2024-10-14 00:41:51,128 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
Generated by OMERO-python-superbuild-push#201 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/201/)'
2024-10-14 00:41:51,140 [ scc.git] DEBUG [detached HEAD 62d8bb523] merge master -Dorg -Ssuccess-only
2024-10-14 00:41:51,140 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-14 00:41:51,141 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-14 00:41:51,194 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-10-14 00:41:51,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:41:51,436 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-10-14 00:41:51,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:41:51,836 [ scc.config] DEBUG Found submodule.omero-py.url
2024-10-14 00:41:52,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:41:52,223 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-10-14 00:41:52,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:41:52,603 [ scc.config] DEBUG Found submodule.omero-web.url
2024-10-14 00:41:52,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-14 00:41:53,001 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-14 00:41:53,024 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f491a94bfd0> has local changes
2024-10-14 00:41:53,025 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
Generated by OMERO-python-superbuild-push#201 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/201/)'
2024-10-14 00:41:53,041 [ scc.git] DEBUG [detached HEAD 70a83f5] merge master -Dorg -Ssuccess-only
2024-10-14 00:41:53,042 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-14 00:41:53,042 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-10-14 00:41:53,042 [ scc.merge] INFO Already up to date.
2024-10-14 00:41:53,042 [ scc.merge] INFO
2024-10-14 00:41:53,042 [ scc.merge] INFO Merged PRs:
2024-10-14 00:41:53,042 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-14 00:41:53,042 [ scc.merge] INFO
2024-10-14 00:41:53,042 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-10-14 00:41:53,042 [ scc.merge] INFO Already up to date.
2024-10-14 00:41:53,042 [ scc.merge] INFO
2024-10-14 00:41:53,042 [ scc.merge] INFO Merged PRs:
2024-10-14 00:41:53,042 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-14 00:41:53,042 [ scc.merge] INFO
2024-10-14 00:41:53,042 [ scc.merge] INFO Repository: ome/omero-marshal
2024-10-14 00:41:53,042 [ scc.merge] INFO Excluded PRs:
2024-10-14 00:41:53,042 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-10-14 00:41:53,042 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-10-14 00:41:53,042 [ scc.merge] INFO Already up to date.
2024-10-14 00:41:53,042 [ scc.merge] INFO
2024-10-14 00:41:53,042 [ scc.merge] INFO Merged PRs:
2024-10-14 00:41:53,042 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-14 00:41:53,043 [ scc.merge] INFO
2024-10-14 00:41:53,043 [ scc.merge] INFO Repository: ome/omero-py
2024-10-14 00:41:53,043 [ scc.merge] INFO Excluded PRs:
2024-10-14 00:41:53,043 [ scc.merge] INFO - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
2024-10-14 00:41:53,043 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-10-14 00:41:53,043 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-10-14 00:41:53,043 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-10-14 00:41:53,043 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-10-14 00:41:53,043 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-10-14 00:41:53,043 [ scc.merge] INFO Already up to date.
2024-10-14 00:41:53,043 [ scc.merge] INFO
2024-10-14 00:41:53,043 [ scc.merge] INFO Merged PRs:
2024-10-14 00:41:53,043 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-10-14 00:41:53,043 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-14 00:41:53,043 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-14 00:41:53,043 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-14 00:41:53,043 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-10-14 00:41:53,043 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-14 00:41:53,043 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-10-14 00:41:53,043 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-10-14 00:41:53,043 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation'
2024-10-14 00:41:53,043 [ scc.merge] INFO - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-14 00:41:53,043 [ scc.merge] INFO
2024-10-14 00:41:53,043 [ scc.merge] INFO Repository: ome/omero-scripts
2024-10-14 00:41:53,043 [ scc.merge] INFO Excluded PRs:
2024-10-14 00:41:53,043 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-10-14 00:41:53,043 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-10-14 00:41:53,043 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-10-14 00:41:53,043 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-10-14 00:41:53,043 [ scc.merge] INFO Already up to date.
2024-10-14 00:41:53,043 [ scc.merge] INFO
2024-10-14 00:41:53,043 [ scc.merge] INFO Merged PRs:
2024-10-14 00:41:53,043 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-14 00:41:53,043 [ scc.merge] INFO
2024-10-14 00:41:53,043 [ scc.merge] INFO Conflicting PRs (not included):
2024-10-14 00:41:53,044 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-14 00:41:53,044 [ scc.merge] INFO
2024-10-14 00:41:53,044 [ scc.merge] INFO Repository: ome/omero-web
2024-10-14 00:41:53,044 [ scc.merge] INFO Excluded PRs:
2024-10-14 00:41:53,044 [ scc.merge] INFO - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-10-14 00:41:53,044 [ scc.merge] INFO - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
2024-10-14 00:41:53,044 [ scc.merge] INFO - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
2024-10-14 00:41:53,044 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-10-14 00:41:53,044 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-10-14 00:41:53,044 [ scc.merge] INFO Already up to date.
2024-10-14 00:41:53,044 [ scc.merge] INFO
2024-10-14 00:41:53,044 [ scc.merge] INFO Merged PRs:
2024-10-14 00:41:53,044 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-14 00:41:53,044 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-14 00:41:53,044 [ scc.merge] INFO - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-14 00:41:53,044 [ scc.merge] INFO - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-14 00:41:53,044 [ scc.merge] INFO
2024-10-14 00:41:53,044 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-14 00:41:53,044 [ scc.git] DEBUG Calling 'git remote'
2024-10-14 00:41:53,048 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-14 00:41:53,049 [ scc.git] DEBUG Calling 'git remote'
2024-10-14 00:41:53,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-14 00:41:53,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-14 00:41:53,052 [ scc.git] DEBUG Calling 'git remote'
2024-10-14 00:41:53,056 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-14 00:41:53,056 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-14 00:41:53,056 [ scc.git] DEBUG Calling 'git remote'
2024-10-14 00:41:53,061 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-14 00:41:53,061 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-14 00:41:53,061 [ scc.git] DEBUG Calling 'git remote'
2024-10-14 00:41:53,065 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-14 00:41:53,065 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-14 00:41:53,066 [ scc.git] DEBUG Calling 'git remote'
2024-10-14 00:41:53,069 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 4fd72efa
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from da5b7d11f
nothing to commit, working tree clean
HEAD detached from e849d72
nothing to commit, working tree clean
2024-10-14 00:42:20,399 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
![[Jenkins]](/jenkins/static/4f42acd4/images/svgs/logo.svg){kind=logo}
