Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-10-15 00:43:21,729 [ scc.config] DEBUG Found github.token
2024-10-15 00:43:21,731 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-15 00:43:21,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:43:22,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:43:22,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-15 00:43:22,672 [ scc.gh] DEBUG 4372 remaining from 5000 (Reset at 00:10
2024-10-15 00:43:22,672 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-15 00:43:22,676 [ scc.git] DEBUG Check current status
2024-10-15 00:43:22,677 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-15 00:43:22,680 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-15 00:43:22,680 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-15 00:43:22,720 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-15 00:43:22,722 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-15 00:43:22,726 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-15 00:43:22,730 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-15 00:43:22,733 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-15 00:43:22,738 [ scc.config] DEBUG Found remote.origin.url
2024-10-15 00:43:23,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-15 00:43:23,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-15 00:43:23,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-15 00:43:24,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-15 00:43:24,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-15 00:43:24,790 [ scc.git] DEBUG Resetting...
2024-10-15 00:43:24,790 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-15 00:43:24,796 [ scc.git] DEBUG HEAD is now at e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-15 00:43:24,796 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-15 00:43:24,842 [ scc.git] DEBUG Check current status
2024-10-15 00:43:24,843 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-15 00:43:24,846 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-15 00:43:24,847 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-15 00:43:24,882 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-15 00:43:24,885 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-15 00:43:24,888 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-15 00:43:24,892 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-15 00:43:24,895 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-15 00:43:24,895 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-15 00:43:24,896 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-15 00:43:24,896 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-15 00:43:24,896 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-15 00:43:24,896 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-15 00:43:24,896 [ scc.repo] DEBUG ## PRs found:
2024-10-15 00:43:25,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-15 00:43:25,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-15 00:43:25,721 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-15 00:43:25,721 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-15 00:43:25,721 [ scc.repo] DEBUG ## Branches found:
2024-10-15 00:43:25,721 [ scc.git] DEBUG Get sha1 of %s
2024-10-15 00:43:25,721 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:43:25,725 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-15 00:43:25,728 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-15 00:43:25,728 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-15 00:43:25,732 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-15 00:43:25,735 [ scc.git] DEBUG Already up to date.
2024-10-15 00:43:25,735 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-15 00:43:26,058 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-15 00:43:26,059 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-15 00:43:26,063 [ scc.git] DEBUG ## Unique users: []
2024-10-15 00:43:26,064 [ scc.git] DEBUG Get sha1 of %s
2024-10-15 00:43:26,064 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:43:26,067 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-15 00:43:26,071 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:43:26,074 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-15 00:43:26,083 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-15 00:43:26,085 [ scc.git] DEBUG omero-py | 2 +-
2024-10-15 00:43:26,085 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-10-15 00:43:26,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:43:26,218 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-15 00:43:26,446 [ scc.git] DEBUG Submodule path 'omero-py': checked out '4fd72efaa8cdbec9da98e1d28678af16878a86ba'
2024-10-15 00:43:26,447 [ scc.git] DEBUG Get sha1 of %s
2024-10-15 00:43:26,447 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:43:26,451 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-15 00:43:27,022 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f52728e1fd0> has no local changes
2024-10-15 00:43:27,023 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Generated by OMERO-python-superbuild-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/202/)'
2024-10-15 00:43:27,046 [ scc.git] DEBUG [detached HEAD 5523caa] merge master -Dorg -Snone
2024-10-15 00:43:27,047 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-15 00:43:27,047 [ scc.merge] INFO Already up to date.
2024-10-15 00:43:27,047 [ scc.merge] INFO
2024-10-15 00:43:27,047 [ scc.merge] INFO Merged PRs:
2024-10-15 00:43:27,047 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-15 00:43:27,047 [ scc.merge] INFO
2024-10-15 00:43:27,047 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-15 00:43:27,047 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-15 00:43:29,387 [ scc.config] DEBUG Found github.token
2024-10-15 00:43:29,391 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-15 00:43:29,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:43:29,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:43:30,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-15 00:43:30,433 [ scc.gh] DEBUG 4362 remaining from 5000 (Reset at 00:10
2024-10-15 00:43:30,433 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-15 00:43:30,438 [ scc.git] DEBUG Check current status
2024-10-15 00:43:30,438 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-15 00:43:30,441 [ scc.git] DEBUG 5523caa merge master -Dorg -Snone
2024-10-15 00:43:30,441 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-15 00:43:30,478 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-15 00:43:30,481 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-15 00:43:30,484 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-15 00:43:30,488 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-15 00:43:30,491 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-15 00:43:30,496 [ scc.config] DEBUG Found remote.origin.url
2024-10-15 00:43:30,496 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-10-15 00:43:30,498 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-15 00:43:30,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-15 00:43:31,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-15 00:43:31,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-15 00:43:32,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-15 00:43:32,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-15 00:43:32,538 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-15 00:43:32,582 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-15 00:43:32,582 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-15 00:43:32,586 [ scc.git] DEBUG Check current status
2024-10-15 00:43:32,586 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-15 00:43:32,589 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-10-15 00:43:32,589 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-15 00:43:32,629 [ scc.config] DEBUG Found remote.origin.url
2024-10-15 00:43:33,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-10-15 00:43:33,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-15 00:43:33,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-15 00:43:34,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-15 00:43:34,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-15 00:43:34,713 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-15 00:43:34,749 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-15 00:43:34,750 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-15 00:43:34,750 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-15 00:43:34,754 [ scc.git] DEBUG Check current status
2024-10-15 00:43:34,754 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-15 00:43:34,758 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-10-15 00:43:34,758 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-15 00:43:34,797 [ scc.config] DEBUG Found remote.origin.url
2024-10-15 00:43:35,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-10-15 00:43:35,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-15 00:43:36,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-15 00:43:36,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-15 00:43:36,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-15 00:43:36,858 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-15 00:43:36,896 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-15 00:43:36,897 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-15 00:43:36,897 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-15 00:43:36,900 [ scc.git] DEBUG Check current status
2024-10-15 00:43:36,900 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-15 00:43:36,906 [ scc.git] DEBUG 4fd72efa Bump version: 5.19.5 → 5.19.6.dev0
2024-10-15 00:43:36,906 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-15 00:43:36,943 [ scc.config] DEBUG Found remote.origin.url
2024-10-15 00:43:37,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-10-15 00:43:37,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-15 00:43:38,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-15 00:43:38,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-15 00:43:39,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-15 00:43:39,172 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-15 00:43:39,209 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-15 00:43:39,210 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-15 00:43:39,210 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-15 00:43:39,213 [ scc.git] DEBUG Check current status
2024-10-15 00:43:39,214 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-15 00:43:39,262 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-15 00:43:39,262 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-15 00:43:39,299 [ scc.config] DEBUG Found remote.origin.url
2024-10-15 00:43:39,300 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-10-15 00:43:39,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-10-15 00:43:40,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-15 00:43:40,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-15 00:43:40,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-15 00:43:41,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-15 00:43:41,321 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-15 00:43:41,359 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-15 00:43:41,360 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-15 00:43:41,360 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-15 00:43:41,363 [ scc.git] DEBUG Check current status
2024-10-15 00:43:41,364 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-15 00:43:41,413 [ scc.git] DEBUG da5b7d11f Bump version: 5.27.2 → 5.27.3.dev0
2024-10-15 00:43:41,413 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-15 00:43:41,455 [ scc.config] DEBUG Found remote.origin.url
2024-10-15 00:43:41,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-10-15 00:43:42,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-15 00:43:42,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-15 00:43:43,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-15 00:43:43,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-15 00:43:43,438 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-15 00:43:43,474 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-15 00:43:43,474 [ scc.git] DEBUG Resetting...
2024-10-15 00:43:43,474 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-15 00:43:43,479 [ scc.git] DEBUG HEAD is now at 5523caa merge master -Dorg -Snone
2024-10-15 00:43:43,479 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-15 00:43:43,525 [ scc.git] DEBUG Check current status
2024-10-15 00:43:43,526 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-15 00:43:43,529 [ scc.git] DEBUG 5523caa merge master -Dorg -Snone
2024-10-15 00:43:43,529 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-15 00:43:43,565 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-15 00:43:43,568 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-15 00:43:43,571 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-15 00:43:43,574 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-15 00:43:43,577 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-15 00:43:43,578 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-15 00:43:43,578 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-15 00:43:43,578 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-15 00:43:43,578 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-15 00:43:43,578 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-15 00:43:43,578 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-10-15 00:43:43,578 [ scc.repo] DEBUG ## PRs found:
2024-10-15 00:43:43,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-15 00:43:44,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-15 00:43:44,408 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-15 00:43:44,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-15 00:43:45,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-15 00:43:45,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-15 00:43:46,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/9660559833988d271074de56e54f2462a7be74e9?per_page=1 HTTP/1.1" 200 2
2024-10-15 00:43:46,292 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-15 00:43:46,292 [ scc.repo] DEBUG ## Branches found:
2024-10-15 00:43:46,292 [ scc.git] DEBUG Get sha1 of %s
2024-10-15 00:43:46,292 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:43:46,296 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-15 00:43:46,300 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-15 00:43:46,300 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-15 00:43:46,304 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-15 00:43:46,308 [ scc.git] DEBUG Already up to date.
2024-10-15 00:43:46,308 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-15 00:43:46,632 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-15 00:43:46,632 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-15 00:43:46,637 [ scc.git] DEBUG ## Unique users: []
2024-10-15 00:43:46,638 [ scc.git] DEBUG Get sha1 of %s
2024-10-15 00:43:46,638 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:43:46,642 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-15 00:43:46,645 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:43:46,649 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-15 00:43:46,652 [ scc.git] DEBUG Already up to date.
2024-10-15 00:43:46,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:43:46,781 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-15 00:43:46,818 [ scc.git] DEBUG Get sha1 of %s
2024-10-15 00:43:46,819 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:43:46,822 [ scc.repo] DEBUG ## PRs found:
2024-10-15 00:43:47,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-10-15 00:43:47,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-10-15 00:43:48,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-10-15 00:43:48,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-15 00:43:49,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-15 00:43:49,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-15 00:43:50,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-10-15 00:43:50,030 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-15 00:43:50,030 [ scc.repo] DEBUG ## Branches found:
2024-10-15 00:43:50,030 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-15 00:43:50,031 [ scc.git] DEBUG Get sha1 of %s
2024-10-15 00:43:50,031 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:43:50,035 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-15 00:43:50,038 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-15 00:43:50,039 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-15 00:43:50,043 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-15 00:43:50,046 [ scc.git] DEBUG Already up to date.
2024-10-15 00:43:50,047 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-10-15 00:43:50,453 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-10-15 00:43:50,454 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-10-15 00:43:50,458 [ scc.git] DEBUG ## Unique users: []
2024-10-15 00:43:50,458 [ scc.git] DEBUG Get sha1 of %s
2024-10-15 00:43:50,458 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:43:50,462 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-15 00:43:50,466 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:43:50,469 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-15 00:43:50,820 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-10-15 00:43:50,820 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-10-15 00:43:50,821 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-10-15 00:43:50,821 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-10-15 00:43:50,821 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-10-15 00:43:50,821 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-10-15 00:43:50,821 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-10-15 00:43:50,821 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-10-15 00:43:50,821 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-10-15 00:43:50,821 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-15 00:43:50,825 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-10-15 00:43:50,825 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-10-15 00:43:50,825 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-10-15 00:43:50,825 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-10-15 00:43:50,825 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-10-15 00:43:50,825 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-10-15 00:43:50,825 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-10-15 00:43:50,825 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-10-15 00:43:50,825 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-10-15 00:43:50,825 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-10-15 00:43:50,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:43:50,958 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-15 00:43:50,994 [ scc.git] DEBUG Get sha1 of %s
2024-10-15 00:43:50,995 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:43:50,998 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-15 00:43:51,034 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-15 00:43:51,040 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa2e6d1f790> has no local changes
2024-10-15 00:43:51,040 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/202/)'
2024-10-15 00:43:51,047 [ scc.git] DEBUG [detached HEAD d55137c] merge master -Dorg -Ssuccess-only
2024-10-15 00:43:51,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-15 00:43:51,047 [ scc.repo] DEBUG ## PRs found:
2024-10-15 00:43:51,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-10-15 00:43:51,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-10-15 00:43:52,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-10-15 00:43:52,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-15 00:43:53,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-15 00:43:53,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-15 00:43:54,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-10-15 00:43:54,160 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-15 00:43:54,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-10-15 00:43:55,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-10-15 00:43:55,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-10-15 00:43:55,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-10-15 00:43:55,937 [ scc.repo] DEBUG ## Branches found:
2024-10-15 00:43:55,937 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-15 00:43:55,937 [ scc.git] DEBUG Get sha1 of %s
2024-10-15 00:43:55,937 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:43:55,941 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-15 00:43:55,945 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-15 00:43:55,945 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-15 00:43:55,949 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-15 00:43:55,953 [ scc.git] DEBUG Already up to date.
2024-10-15 00:43:55,953 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-10-15 00:43:56,437 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-10-15 00:43:56,437 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-10-15 00:43:56,442 [ scc.git] DEBUG ## Unique users: []
2024-10-15 00:43:56,442 [ scc.git] DEBUG Get sha1 of %s
2024-10-15 00:43:56,442 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:43:56,447 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-15 00:43:56,452 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:43:56,455 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-15 00:43:56,467 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-10-15 00:43:56,468 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-15 00:43:56,471 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-10-15 00:43:56,471 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-10-15 00:43:56,471 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-10-15 00:43:56,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:43:56,599 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-15 00:43:56,636 [ scc.git] DEBUG Get sha1 of %s
2024-10-15 00:43:56,636 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:43:56,640 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-15 00:43:56,676 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-15 00:43:56,681 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa2e6d59730> has no local changes
2024-10-15 00:43:56,681 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/202/)'
2024-10-15 00:43:56,690 [ scc.git] DEBUG [detached HEAD af1f5b4] merge master -Dorg -Ssuccess-only
2024-10-15 00:43:56,690 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-15 00:43:56,690 [ scc.repo] DEBUG ## PRs found:
2024-10-15 00:43:57,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-10-15 00:43:57,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/431 HTTP/1.1" 200 None
2024-10-15 00:43:58,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-15 00:43:58,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-15 00:43:59,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-15 00:43:59,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-15 00:43:59,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0e500ec05bf9227b66b28a480b40e0936241d953?per_page=1 HTTP/1.1" 200 None
2024-10-15 00:44:00,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-15 00:44:00,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/status HTTP/1.1" 200 None
2024-10-15 00:44:00,798 [ scc.repo] DEBUG - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-15 00:44:01,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None
2024-10-15 00:44:01,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None
2024-10-15 00:44:02,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None
2024-10-15 00:44:02,154 [ scc.repo] DEBUG # ... Include label: include
2024-10-15 00:44:02,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-15 00:44:03,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-15 00:44:03,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-15 00:44:04,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-15 00:44:04,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1?per_page=1 HTTP/1.1" 200 None
2024-10-15 00:44:05,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-15 00:44:05,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/status HTTP/1.1" 200 None
2024-10-15 00:44:05,546 [ scc.repo] DEBUG - PR 427 Rdornier 'Add fileset folder creation'
2024-10-15 00:44:05,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-10-15 00:44:06,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-10-15 00:44:06,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-15 00:44:07,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-15 00:44:07,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-15 00:44:08,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-15 00:44:08,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-10-15 00:44:09,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-15 00:44:09,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-10-15 00:44:09,645 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-10-15 00:44:10,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-10-15 00:44:10,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-10-15 00:44:10,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-10-15 00:44:11,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-15 00:44:11,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-15 00:44:12,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-10-15 00:44:12,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-15 00:44:13,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-15 00:44:13,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-15 00:44:14,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-15 00:44:14,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-10-15 00:44:15,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-15 00:44:15,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-10-15 00:44:15,624 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-10-15 00:44:16,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-10-15 00:44:16,059 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-10-15 00:44:16,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-10-15 00:44:16,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-10-15 00:44:17,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-15 00:44:17,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-15 00:44:18,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-15 00:44:18,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-10-15 00:44:18,757 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-15 00:44:19,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-10-15 00:44:19,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-10-15 00:44:20,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-15 00:44:20,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-15 00:44:21,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-15 00:44:21,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-15 00:44:22,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-10-15 00:44:22,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-15 00:44:22,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-10-15 00:44:22,949 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-10-15 00:44:23,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-10-15 00:44:23,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-10-15 00:44:24,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-10-15 00:44:24,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-10-15 00:44:25,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-15 00:44:25,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-15 00:44:26,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-15 00:44:26,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-10-15 00:44:26,496 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-15 00:44:26,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-10-15 00:44:27,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-15 00:44:27,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-15 00:44:28,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-15 00:44:28,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-10-15 00:44:28,774 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-15 00:44:29,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-10-15 00:44:29,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-10-15 00:44:30,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-15 00:44:30,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-15 00:44:31,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-15 00:44:31,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-10-15 00:44:31,542 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-15 00:44:31,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-10-15 00:44:32,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-10-15 00:44:32,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-15 00:44:33,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-15 00:44:33,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-15 00:44:34,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-10-15 00:44:34,308 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-10-15 00:44:34,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-10-15 00:44:35,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-10-15 00:44:35,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-10-15 00:44:36,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-10-15 00:44:36,054 [ scc.repo] DEBUG ## Branches found:
2024-10-15 00:44:36,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-15 00:44:36,055 [ scc.git] DEBUG Get sha1 of %s
2024-10-15 00:44:36,055 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:44:36,059 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-15 00:44:36,063 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-15 00:44:36,063 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-15 00:44:36,067 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-15 00:44:36,071 [ scc.git] DEBUG Already up to date.
2024-10-15 00:44:36,072 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-10-15 00:44:37,034 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-15 00:44:37,034 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-10-15 00:44:37,038 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-10-15 00:44:37,445 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-15 00:44:37,445 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-10-15 00:44:37,450 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-10-15 00:44:37,921 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-15 00:44:37,921 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-10-15 00:44:37,926 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-10-15 00:44:38,209 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-15 00:44:38,209 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-10-15 00:44:38,213 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-10-15 00:44:38,622 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-15 00:44:38,622 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-10-15 00:44:38,627 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-10-15 00:44:38,912 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-15 00:44:38,912 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-10-15 00:44:38,917 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-10-15 00:44:39,215 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-15 00:44:39,216 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-10-15 00:44:39,220 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-10-15 00:44:39,660 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-15 00:44:39,660 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-10-15 00:44:39,665 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head'
2024-10-15 00:44:40,424 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-15 00:44:40,424 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD
2024-10-15 00:44:40,429 [ scc.git] DEBUG Calling 'git fetch origin pull/431/head'
2024-10-15 00:44:40,790 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-15 00:44:40,791 [ scc.git] DEBUG * branch refs/pull/431/head -> FETCH_HEAD
2024-10-15 00:44:40,795 [ scc.git] DEBUG ## Unique users: []
2024-10-15 00:44:40,795 [ scc.git] DEBUG Get sha1 of %s
2024-10-15 00:44:40,795 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:44:40,801 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-15 00:44:40,812 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:44:40,815 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-15 00:44:41,065 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-10-15 00:44:41,065 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-10-15 00:44:41,066 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-15 00:44:41,070 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-10-15 00:44:41,070 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-10-15 00:44:41,070 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-10-15 00:44:41,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:44:41,205 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-15 00:44:41,217 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:44:41,220 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-15 00:44:41,841 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-15 00:44:41,841 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-10-15 00:44:41,841 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-15 00:44:41,849 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-10-15 00:44:41,849 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-10-15 00:44:41,849 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-10-15 00:44:41,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:44:41,992 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-15 00:44:42,003 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:44:42,007 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-15 00:44:42,054 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-10-15 00:44:42,055 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-15 00:44:42,057 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-10-15 00:44:42,057 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-10-15 00:44:42,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:44:42,371 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-15 00:44:42,382 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:44:42,386 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-15 00:44:42,554 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-10-15 00:44:42,554 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-10-15 00:44:42,555 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-15 00:44:42,558 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-10-15 00:44:42,558 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-10-15 00:44:42,558 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-10-15 00:44:42,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:44:42,759 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-15 00:44:42,770 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:44:42,774 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-15 00:44:42,800 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-15 00:44:42,802 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-10-15 00:44:42,802 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-10-15 00:44:42,802 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-10-15 00:44:42,802 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-10-15 00:44:42,802 [ scc.git] DEBUG create mode 100644 connect.py
2024-10-15 00:44:43,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:44:43,141 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-15 00:44:43,152 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:44:43,157 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-15 00:44:43,295 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-10-15 00:44:43,296 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-15 00:44:43,299 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-10-15 00:44:43,299 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-10-15 00:44:43,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:44:43,520 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-10-15 00:44:43,531 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:44:43,535 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-10-15 00:44:44,136 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-10-15 00:44:44,137 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-15 00:44:44,141 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-10-15 00:44:44,141 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-10-15 00:44:44,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:44:44,274 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-15 00:44:44,286 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:44:44,290 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-15 00:44:44,435 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-15 00:44:44,497 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-15 00:44:44,504 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-10-15 00:44:44,504 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-10-15 00:44:44,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:44:44,652 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-15 00:44:44,664 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:44:44,667 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-15 00:44:44,828 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-15 00:44:44,832 [ scc.git] DEBUG .gitignore | 1 +
2024-10-15 00:44:44,832 [ scc.git] DEBUG src/omero/plugins/download.py | 17 ++++++++++++-----
2024-10-15 00:44:44,832 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 5 deletions(-)
2024-10-15 00:44:45,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:44:45,033 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-15 00:44:45,046 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:44:45,050 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 431 (omero.HdfStorage.update: add size check on data.rowNumbers) 0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-15 00:44:45,132 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-15 00:44:45,135 [ scc.git] DEBUG src/omero/hdfstorageV2.py | 1 +
2024-10-15 00:44:45,135 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2024-10-15 00:44:45,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:44:45,411 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-15 00:44:45,449 [ scc.git] DEBUG Get sha1 of %s
2024-10-15 00:44:45,450 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:44:45,454 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-15 00:44:45,492 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-15 00:44:45,499 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa2e5cafc70> has no local changes
2024-10-15 00:44:45,500 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Generated by OMERO-python-superbuild-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/202/)'
2024-10-15 00:44:45,509 [ scc.git] DEBUG [detached HEAD 453f362b] merge master -Dorg -Ssuccess-only
2024-10-15 00:44:45,510 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-15 00:44:45,510 [ scc.git] INFO Overriding base-branch from master to develop
2024-10-15 00:44:45,510 [ scc.repo] DEBUG ## PRs found:
2024-10-15 00:44:45,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-10-15 00:44:46,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-10-15 00:44:46,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2024-10-15 00:44:47,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-15 00:44:47,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-15 00:44:48,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-15 00:44:48,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-15 00:44:49,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-10-15 00:44:49,146 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-15 00:44:49,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-10-15 00:44:50,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-10-15 00:44:50,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-10-15 00:44:51,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-10-15 00:44:51,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-10-15 00:44:51,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-10-15 00:44:52,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-15 00:44:52,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-15 00:44:53,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-15 00:44:53,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-10-15 00:44:53,698 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-15 00:44:54,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-10-15 00:44:54,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-10-15 00:44:55,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-10-15 00:44:55,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-10-15 00:44:55,579 [ scc.repo] DEBUG ## Branches found:
2024-10-15 00:44:55,579 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-15 00:44:55,579 [ scc.git] DEBUG Get sha1 of %s
2024-10-15 00:44:55,579 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:44:55,584 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-10-15 00:44:55,587 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-15 00:44:55,588 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-10-15 00:44:55,592 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-10-15 00:44:55,596 [ scc.git] DEBUG Already up to date.
2024-10-15 00:44:55,596 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-10-15 00:44:56,017 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-15 00:44:56,017 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-10-15 00:44:56,021 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-10-15 00:44:56,531 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-15 00:44:56,531 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-10-15 00:44:56,536 [ scc.git] DEBUG ## Unique users: []
2024-10-15 00:44:56,536 [ scc.git] DEBUG Get sha1 of %s
2024-10-15 00:44:56,536 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:44:56,541 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-15 00:44:56,546 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:44:56,551 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-15 00:44:56,718 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-10-15 00:44:56,718 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-10-15 00:44:56,718 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-10-15 00:44:56,718 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-10-15 00:44:56,723 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-15 00:44:56,728 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-15 00:44:56,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:44:56,890 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-15 00:44:56,896 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-15 00:44:56,901 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#202](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/202/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/202/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-10-15 00:44:56,904 [ scc.config] DEBUG Found github.token
2024-10-15 00:44:56,904 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-10-15 00:44:56,904 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-15 00:44:56,908 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:44:56,912 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-15 00:44:56,984 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-15 00:44:56,987 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-10-15 00:44:56,987 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-10-15 00:44:57,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:44:57,340 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-15 00:44:57,377 [ scc.git] DEBUG Get sha1 of %s
2024-10-15 00:44:57,377 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:44:57,381 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-15 00:44:57,416 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-15 00:44:57,420 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa2e5cc1be0> has no local changes
2024-10-15 00:44:57,421 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/202/)'
2024-10-15 00:44:57,438 [ scc.git] DEBUG [detached HEAD fcc4bc8] merge master -Dorg -Ssuccess-only
2024-10-15 00:44:57,439 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-15 00:44:57,439 [ scc.repo] DEBUG ## PRs found:
2024-10-15 00:44:57,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-10-15 00:44:58,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/585 HTTP/1.1" 200 None
2024-10-15 00:44:58,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583 HTTP/1.1" 200 None
2024-10-15 00:44:59,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-15 00:44:59,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-15 00:45:00,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-15 00:45:00,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-15 00:45:01,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/aa50f469842b9687c74df8765d72241e6e37d32c?per_page=1 HTTP/1.1" 200 None
2024-10-15 00:45:01,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-15 00:45:02,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/status HTTP/1.1" 200 None
2024-10-15 00:45:02,120 [ scc.repo] DEBUG - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-15 00:45:02,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581 HTTP/1.1" 200 None
2024-10-15 00:45:03,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581/comments HTTP/1.1" 200 None
2024-10-15 00:45:03,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/580 HTTP/1.1" 200 None
2024-10-15 00:45:04,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-15 00:45:04,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-15 00:45:04,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-15 00:45:05,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-15 00:45:05,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc?per_page=1 HTTP/1.1" 200 None
2024-10-15 00:45:06,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-15 00:45:06,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/status HTTP/1.1" 200 None
2024-10-15 00:45:06,700 [ scc.repo] DEBUG - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-15 00:45:07,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568 HTTP/1.1" 200 None
2024-10-15 00:45:07,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568/comments HTTP/1.1" 200 None
2024-10-15 00:45:08,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-10-15 00:45:08,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-10-15 00:45:09,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-10-15 00:45:09,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-10-15 00:45:09,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-15 00:45:10,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-15 00:45:10,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-15 00:45:11,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-15 00:45:11,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-10-15 00:45:12,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-15 00:45:12,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-10-15 00:45:12,657 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-15 00:45:13,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-10-15 00:45:13,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-10-15 00:45:14,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-15 00:45:14,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-15 00:45:15,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-15 00:45:15,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-15 00:45:15,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-10-15 00:45:16,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-15 00:45:16,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-10-15 00:45:16,886 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-15 00:45:17,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-10-15 00:45:17,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-10-15 00:45:18,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-10-15 00:45:18,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-15 00:45:19,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-15 00:45:19,194 [ scc.repo] DEBUG ## Branches found:
2024-10-15 00:45:19,194 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-15 00:45:19,195 [ scc.git] DEBUG Get sha1 of %s
2024-10-15 00:45:19,195 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:45:19,200 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-15 00:45:19,204 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-15 00:45:19,204 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-15 00:45:19,746 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-15 00:45:19,751 [ scc.git] DEBUG Already up to date.
2024-10-15 00:45:19,751 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-10-15 00:45:21,217 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-15 00:45:21,217 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-10-15 00:45:21,221 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-10-15 00:45:21,620 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-15 00:45:21,620 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-10-15 00:45:21,625 [ scc.git] DEBUG Calling 'git fetch origin pull/580/head'
2024-10-15 00:45:22,083 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-15 00:45:22,083 [ scc.git] DEBUG * branch refs/pull/580/head -> FETCH_HEAD
2024-10-15 00:45:22,087 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head'
2024-10-15 00:45:22,416 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-15 00:45:22,416 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD
2024-10-15 00:45:22,421 [ scc.git] DEBUG ## Unique users: []
2024-10-15 00:45:22,421 [ scc.git] DEBUG Get sha1 of %s
2024-10-15 00:45:22,421 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:45:22,426 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-15 00:45:22,432 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:45:22,436 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-15 00:45:22,732 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-10-15 00:45:22,732 [ scc.git] DEBUG Auto-merging setup.py
2024-10-15 00:45:22,734 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-15 00:45:22,737 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-10-15 00:45:22,737 [ scc.git] DEBUG setup.py | 1 +
2024-10-15 00:45:22,737 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-10-15 00:45:22,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:45:22,872 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-15 00:45:22,880 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:45:22,884 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-15 00:45:23,094 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-10-15 00:45:23,094 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-10-15 00:45:23,095 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-15 00:45:23,099 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-10-15 00:45:23,100 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-10-15 00:45:23,100 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-10-15 00:45:23,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:45:23,258 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-15 00:45:23,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:45:23,269 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 580 (omeroweb.webgateway.obj_id_bitmask: handle empty query results) 1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-15 00:45:23,330 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-15 00:45:23,334 [ scc.git] DEBUG omeroweb/webgateway/views.py | 6 ++++++
2024-10-15 00:45:23,334 [ scc.git] DEBUG 1 file changed, 6 insertions(+)
2024-10-15 00:45:23,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:45:23,644 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-15 00:45:23,651 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:45:23,655 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Allow users to click a group name to show data from all users in that group) aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-15 00:45:23,686 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-15 00:45:23,689 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_content.html | 6 +++++-
2024-10-15 00:45:23,689 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_dropdown2.html | 2 --
2024-10-15 00:45:23,689 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 3 deletions(-)
2024-10-15 00:45:24,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:45:24,037 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-15 00:45:24,074 [ scc.git] DEBUG Get sha1 of %s
2024-10-15 00:45:24,075 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-15 00:45:24,079 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-15 00:45:24,115 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-15 00:45:24,125 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa2e4c12fa0> has no local changes
2024-10-15 00:45:24,126 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
Generated by OMERO-python-superbuild-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/202/)'
2024-10-15 00:45:24,182 [ scc.git] DEBUG [detached HEAD 6e887870d] merge master -Dorg -Ssuccess-only
2024-10-15 00:45:24,182 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-15 00:45:24,183 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-15 00:45:24,229 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-10-15 00:45:24,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:45:24,448 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-10-15 00:45:24,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:45:24,834 [ scc.config] DEBUG Found submodule.omero-py.url
2024-10-15 00:45:25,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:45:25,218 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-10-15 00:45:25,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:45:25,602 [ scc.config] DEBUG Found submodule.omero-web.url
2024-10-15 00:45:25,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-15 00:45:25,981 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-15 00:45:26,005 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa2e6faafd0> has local changes
2024-10-15 00:45:26,006 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
Generated by OMERO-python-superbuild-push#202 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/202/)'
2024-10-15 00:45:26,014 [ scc.git] DEBUG [detached HEAD 21aa23a] merge master -Dorg -Ssuccess-only
2024-10-15 00:45:26,014 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-15 00:45:26,014 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-10-15 00:45:26,014 [ scc.merge] INFO Already up to date.
2024-10-15 00:45:26,014 [ scc.merge] INFO
2024-10-15 00:45:26,014 [ scc.merge] INFO Merged PRs:
2024-10-15 00:45:26,014 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-15 00:45:26,014 [ scc.merge] INFO
2024-10-15 00:45:26,014 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-10-15 00:45:26,014 [ scc.merge] INFO Already up to date.
2024-10-15 00:45:26,015 [ scc.merge] INFO
2024-10-15 00:45:26,015 [ scc.merge] INFO Merged PRs:
2024-10-15 00:45:26,015 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-15 00:45:26,015 [ scc.merge] INFO
2024-10-15 00:45:26,015 [ scc.merge] INFO Repository: ome/omero-marshal
2024-10-15 00:45:26,015 [ scc.merge] INFO Excluded PRs:
2024-10-15 00:45:26,015 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-10-15 00:45:26,015 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-10-15 00:45:26,015 [ scc.merge] INFO Already up to date.
2024-10-15 00:45:26,015 [ scc.merge] INFO
2024-10-15 00:45:26,015 [ scc.merge] INFO Merged PRs:
2024-10-15 00:45:26,015 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-15 00:45:26,015 [ scc.merge] INFO
2024-10-15 00:45:26,015 [ scc.merge] INFO Repository: ome/omero-py
2024-10-15 00:45:26,015 [ scc.merge] INFO Excluded PRs:
2024-10-15 00:45:26,015 [ scc.merge] INFO - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
2024-10-15 00:45:26,015 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-10-15 00:45:26,015 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-10-15 00:45:26,015 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-10-15 00:45:26,015 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-10-15 00:45:26,015 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-10-15 00:45:26,015 [ scc.merge] INFO Already up to date.
2024-10-15 00:45:26,015 [ scc.merge] INFO
2024-10-15 00:45:26,015 [ scc.merge] INFO Merged PRs:
2024-10-15 00:45:26,015 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-10-15 00:45:26,015 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-15 00:45:26,015 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-15 00:45:26,015 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-15 00:45:26,015 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-10-15 00:45:26,015 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-15 00:45:26,015 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-10-15 00:45:26,015 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-10-15 00:45:26,015 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation'
2024-10-15 00:45:26,015 [ scc.merge] INFO - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-15 00:45:26,015 [ scc.merge] INFO
2024-10-15 00:45:26,016 [ scc.merge] INFO Repository: ome/omero-scripts
2024-10-15 00:45:26,016 [ scc.merge] INFO Excluded PRs:
2024-10-15 00:45:26,016 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-10-15 00:45:26,016 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-10-15 00:45:26,016 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-10-15 00:45:26,016 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-10-15 00:45:26,016 [ scc.merge] INFO Already up to date.
2024-10-15 00:45:26,016 [ scc.merge] INFO
2024-10-15 00:45:26,016 [ scc.merge] INFO Merged PRs:
2024-10-15 00:45:26,016 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-15 00:45:26,016 [ scc.merge] INFO
2024-10-15 00:45:26,016 [ scc.merge] INFO Conflicting PRs (not included):
2024-10-15 00:45:26,016 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-15 00:45:26,016 [ scc.merge] INFO
2024-10-15 00:45:26,016 [ scc.merge] INFO Repository: ome/omero-web
2024-10-15 00:45:26,016 [ scc.merge] INFO Excluded PRs:
2024-10-15 00:45:26,016 [ scc.merge] INFO - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-10-15 00:45:26,016 [ scc.merge] INFO - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
2024-10-15 00:45:26,016 [ scc.merge] INFO - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
2024-10-15 00:45:26,016 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-10-15 00:45:26,016 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-10-15 00:45:26,016 [ scc.merge] INFO Already up to date.
2024-10-15 00:45:26,016 [ scc.merge] INFO
2024-10-15 00:45:26,016 [ scc.merge] INFO Merged PRs:
2024-10-15 00:45:26,016 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-15 00:45:26,016 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-15 00:45:26,016 [ scc.merge] INFO - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-15 00:45:26,016 [ scc.merge] INFO - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-15 00:45:26,016 [ scc.merge] INFO
2024-10-15 00:45:26,016 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-15 00:45:26,016 [ scc.git] DEBUG Calling 'git remote'
2024-10-15 00:45:26,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-15 00:45:26,020 [ scc.git] DEBUG Calling 'git remote'
2024-10-15 00:45:26,023 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-15 00:45:26,024 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-15 00:45:26,024 [ scc.git] DEBUG Calling 'git remote'
2024-10-15 00:45:26,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-15 00:45:26,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-15 00:45:26,027 [ scc.git] DEBUG Calling 'git remote'
2024-10-15 00:45:26,031 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-15 00:45:26,031 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-15 00:45:26,031 [ scc.git] DEBUG Calling 'git remote'
2024-10-15 00:45:26,034 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-15 00:45:26,035 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-15 00:45:26,035 [ scc.git] DEBUG Calling 'git remote'
2024-10-15 00:45:26,038 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 4fd72efa
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from da5b7d11f
nothing to commit, working tree clean
HEAD detached from e849d72
nothing to commit, working tree clean
2024-10-15 00:45:54,392 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
![[Jenkins]](/jenkins/static/03a0bb70/images/svgs/logo.svg){kind=logo}
