Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-10-16 00:34:06,203 [ scc.config] DEBUG Found github.token
2024-10-16 00:34:06,205 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-16 00:34:06,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:34:06,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:34:07,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-16 00:34:07,167 [ scc.gh] DEBUG 4366 remaining from 5000 (Reset at 00:10
2024-10-16 00:34:07,168 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-16 00:34:07,171 [ scc.git] DEBUG Check current status
2024-10-16 00:34:07,171 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-16 00:34:07,174 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-16 00:34:07,174 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-16 00:34:07,211 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-16 00:34:07,214 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-16 00:34:07,217 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-16 00:34:07,220 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-16 00:34:07,223 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-16 00:34:07,227 [ scc.config] DEBUG Found remote.origin.url
2024-10-16 00:34:07,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-16 00:34:08,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-16 00:34:08,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-16 00:34:08,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-16 00:34:09,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-16 00:34:09,381 [ scc.git] DEBUG Resetting...
2024-10-16 00:34:09,381 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-16 00:34:09,386 [ scc.git] DEBUG HEAD is now at e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-16 00:34:09,387 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-16 00:34:09,431 [ scc.git] DEBUG Check current status
2024-10-16 00:34:09,431 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-16 00:34:09,435 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-16 00:34:09,435 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-16 00:34:09,469 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-16 00:34:09,472 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-16 00:34:09,475 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-16 00:34:09,478 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-16 00:34:09,482 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-16 00:34:09,482 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-16 00:34:09,482 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-16 00:34:09,482 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-16 00:34:09,482 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-16 00:34:09,482 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-16 00:34:09,483 [ scc.repo] DEBUG ## PRs found:
2024-10-16 00:34:09,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-16 00:34:10,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-16 00:34:10,318 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-16 00:34:10,318 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-16 00:34:10,318 [ scc.repo] DEBUG ## Branches found:
2024-10-16 00:34:10,319 [ scc.git] DEBUG Get sha1 of %s
2024-10-16 00:34:10,319 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:34:10,322 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-16 00:34:10,325 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-16 00:34:10,325 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-16 00:34:10,329 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-16 00:34:10,332 [ scc.git] DEBUG Already up to date.
2024-10-16 00:34:10,332 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-16 00:34:10,630 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-16 00:34:10,631 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-16 00:34:10,635 [ scc.git] DEBUG ## Unique users: []
2024-10-16 00:34:10,635 [ scc.git] DEBUG Get sha1 of %s
2024-10-16 00:34:10,635 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:34:10,639 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-16 00:34:10,643 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:34:10,646 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-16 00:34:10,654 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-16 00:34:10,657 [ scc.git] DEBUG omero-py | 2 +-
2024-10-16 00:34:10,657 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-10-16 00:34:10,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:34:10,796 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-16 00:34:10,869 [ scc.git] DEBUG Submodule path 'omero-py': checked out '4fd72efaa8cdbec9da98e1d28678af16878a86ba'
2024-10-16 00:34:10,869 [ scc.git] DEBUG Get sha1 of %s
2024-10-16 00:34:10,869 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:34:10,873 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-16 00:34:11,250 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0c22ce18b0> has no local changes
2024-10-16 00:34:11,251 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Generated by OMERO-python-superbuild-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/203/)'
2024-10-16 00:34:11,275 [ scc.git] DEBUG [detached HEAD 1b6bb9d] merge master -Dorg -Snone
2024-10-16 00:34:11,275 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-16 00:34:11,275 [ scc.merge] INFO Already up to date.
2024-10-16 00:34:11,275 [ scc.merge] INFO
2024-10-16 00:34:11,275 [ scc.merge] INFO Merged PRs:
2024-10-16 00:34:11,275 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-16 00:34:11,275 [ scc.merge] INFO
2024-10-16 00:34:11,275 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-16 00:34:11,275 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-16 00:34:13,415 [ scc.config] DEBUG Found github.token
2024-10-16 00:34:13,418 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-16 00:34:13,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:34:13,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:34:14,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-16 00:34:14,339 [ scc.gh] DEBUG 4356 remaining from 5000 (Reset at 00:10
2024-10-16 00:34:14,339 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-16 00:34:14,343 [ scc.git] DEBUG Check current status
2024-10-16 00:34:14,344 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-16 00:34:14,347 [ scc.git] DEBUG 1b6bb9d merge master -Dorg -Snone
2024-10-16 00:34:14,347 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-16 00:34:14,384 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-16 00:34:14,386 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-16 00:34:14,390 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-16 00:34:14,394 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-16 00:34:14,397 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-16 00:34:14,401 [ scc.config] DEBUG Found remote.origin.url
2024-10-16 00:34:14,401 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-10-16 00:34:14,403 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-16 00:34:14,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-16 00:34:15,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-16 00:34:15,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-16 00:34:16,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-16 00:34:16,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-16 00:34:16,445 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-16 00:34:16,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-16 00:34:16,488 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-16 00:34:16,491 [ scc.git] DEBUG Check current status
2024-10-16 00:34:16,491 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-16 00:34:16,494 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-10-16 00:34:16,495 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-16 00:34:16,534 [ scc.config] DEBUG Found remote.origin.url
2024-10-16 00:34:16,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-10-16 00:34:17,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-16 00:34:17,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-16 00:34:18,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-16 00:34:18,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-16 00:34:18,635 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-16 00:34:18,671 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-16 00:34:18,672 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-16 00:34:18,672 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-16 00:34:18,676 [ scc.git] DEBUG Check current status
2024-10-16 00:34:18,676 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-16 00:34:18,679 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-10-16 00:34:18,679 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-16 00:34:18,716 [ scc.config] DEBUG Found remote.origin.url
2024-10-16 00:34:19,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-10-16 00:34:19,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-16 00:34:20,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-16 00:34:20,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-16 00:34:20,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-16 00:34:20,851 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-16 00:34:20,887 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-16 00:34:20,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-16 00:34:20,888 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-16 00:34:20,891 [ scc.git] DEBUG Check current status
2024-10-16 00:34:20,891 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-16 00:34:20,895 [ scc.git] DEBUG 4fd72efa Bump version: 5.19.5 → 5.19.6.dev0
2024-10-16 00:34:20,895 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-16 00:34:20,931 [ scc.config] DEBUG Found remote.origin.url
2024-10-16 00:34:21,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-10-16 00:34:21,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-16 00:34:22,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-16 00:34:22,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-16 00:34:22,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-16 00:34:22,934 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-16 00:34:22,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-16 00:34:22,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-16 00:34:22,969 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-16 00:34:22,973 [ scc.git] DEBUG Check current status
2024-10-16 00:34:22,973 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-16 00:34:22,976 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-16 00:34:22,976 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-16 00:34:23,014 [ scc.config] DEBUG Found remote.origin.url
2024-10-16 00:34:23,015 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-10-16 00:34:23,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-10-16 00:34:23,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-16 00:34:24,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-16 00:34:24,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-16 00:34:25,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-16 00:34:25,035 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-16 00:34:25,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-16 00:34:25,071 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-16 00:34:25,072 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-16 00:34:25,075 [ scc.git] DEBUG Check current status
2024-10-16 00:34:25,075 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-16 00:34:25,079 [ scc.git] DEBUG da5b7d11f Bump version: 5.27.2 → 5.27.3.dev0
2024-10-16 00:34:25,079 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-16 00:34:25,116 [ scc.config] DEBUG Found remote.origin.url
2024-10-16 00:34:25,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-10-16 00:34:25,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-16 00:34:26,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-16 00:34:26,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-16 00:34:27,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-16 00:34:27,163 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-16 00:34:27,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-16 00:34:27,200 [ scc.git] DEBUG Resetting...
2024-10-16 00:34:27,200 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-16 00:34:27,206 [ scc.git] DEBUG HEAD is now at 1b6bb9d merge master -Dorg -Snone
2024-10-16 00:34:27,206 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-16 00:34:27,253 [ scc.git] DEBUG Check current status
2024-10-16 00:34:27,253 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-16 00:34:27,257 [ scc.git] DEBUG 1b6bb9d merge master -Dorg -Snone
2024-10-16 00:34:27,257 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-16 00:34:27,293 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-16 00:34:27,296 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-16 00:34:27,299 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-16 00:34:27,303 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-16 00:34:27,306 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-16 00:34:27,306 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-16 00:34:27,307 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-16 00:34:27,307 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-16 00:34:27,307 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-16 00:34:27,307 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-16 00:34:27,307 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-10-16 00:34:27,307 [ scc.repo] DEBUG ## PRs found:
2024-10-16 00:34:27,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-16 00:34:28,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-16 00:34:28,095 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-16 00:34:28,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-16 00:34:29,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-16 00:34:29,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-16 00:34:30,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/9660559833988d271074de56e54f2462a7be74e9?per_page=1 HTTP/1.1" 200 2
2024-10-16 00:34:30,095 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-16 00:34:30,096 [ scc.repo] DEBUG ## Branches found:
2024-10-16 00:34:30,096 [ scc.git] DEBUG Get sha1 of %s
2024-10-16 00:34:30,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:34:30,100 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-16 00:34:30,103 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-16 00:34:30,103 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-16 00:34:30,107 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-16 00:34:30,111 [ scc.git] DEBUG Already up to date.
2024-10-16 00:34:30,111 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-16 00:34:30,430 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-16 00:34:30,430 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-16 00:34:30,435 [ scc.git] DEBUG ## Unique users: []
2024-10-16 00:34:30,435 [ scc.git] DEBUG Get sha1 of %s
2024-10-16 00:34:30,435 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:34:30,439 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-16 00:34:30,442 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:34:30,446 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-16 00:34:30,449 [ scc.git] DEBUG Already up to date.
2024-10-16 00:34:30,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:34:30,575 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-16 00:34:30,613 [ scc.git] DEBUG Get sha1 of %s
2024-10-16 00:34:30,613 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:34:30,617 [ scc.repo] DEBUG ## PRs found:
2024-10-16 00:34:31,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-10-16 00:34:31,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-10-16 00:34:31,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-10-16 00:34:32,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-16 00:34:32,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-16 00:34:33,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-16 00:34:33,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-10-16 00:34:33,830 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-16 00:34:33,830 [ scc.repo] DEBUG ## Branches found:
2024-10-16 00:34:33,830 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-16 00:34:33,830 [ scc.git] DEBUG Get sha1 of %s
2024-10-16 00:34:33,830 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:34:33,834 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-16 00:34:33,838 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-16 00:34:33,838 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-16 00:34:33,842 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-16 00:34:33,845 [ scc.git] DEBUG Already up to date.
2024-10-16 00:34:33,846 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-10-16 00:34:34,165 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-10-16 00:34:34,165 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-10-16 00:34:34,169 [ scc.git] DEBUG ## Unique users: []
2024-10-16 00:34:34,169 [ scc.git] DEBUG Get sha1 of %s
2024-10-16 00:34:34,169 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:34:34,174 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-16 00:34:34,179 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:34:34,182 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-16 00:34:34,361 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-10-16 00:34:34,361 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-10-16 00:34:34,362 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-10-16 00:34:34,362 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-10-16 00:34:34,362 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-10-16 00:34:34,362 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-10-16 00:34:34,362 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-10-16 00:34:34,362 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-10-16 00:34:34,362 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-10-16 00:34:34,362 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-16 00:34:34,366 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-10-16 00:34:34,366 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-10-16 00:34:34,366 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-10-16 00:34:34,366 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-10-16 00:34:34,366 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-10-16 00:34:34,366 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-10-16 00:34:34,366 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-10-16 00:34:34,366 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-10-16 00:34:34,366 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-10-16 00:34:34,368 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-10-16 00:34:34,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:34:34,502 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-16 00:34:34,538 [ scc.git] DEBUG Get sha1 of %s
2024-10-16 00:34:34,538 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:34:34,542 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-16 00:34:34,575 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-16 00:34:34,580 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8ab22d49a0> has no local changes
2024-10-16 00:34:34,580 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/203/)'
2024-10-16 00:34:34,587 [ scc.git] DEBUG [detached HEAD 1f50864] merge master -Dorg -Ssuccess-only
2024-10-16 00:34:34,588 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-16 00:34:34,588 [ scc.repo] DEBUG ## PRs found:
2024-10-16 00:34:35,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-10-16 00:34:35,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-10-16 00:34:35,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-10-16 00:34:36,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-16 00:34:36,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-16 00:34:37,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-16 00:34:37,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-10-16 00:34:37,842 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-16 00:34:38,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-10-16 00:34:38,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-10-16 00:34:39,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-10-16 00:34:39,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-10-16 00:34:39,612 [ scc.repo] DEBUG ## Branches found:
2024-10-16 00:34:39,612 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-16 00:34:39,612 [ scc.git] DEBUG Get sha1 of %s
2024-10-16 00:34:39,612 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:34:39,617 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-16 00:34:39,620 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-16 00:34:39,621 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-16 00:34:39,624 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-16 00:34:39,629 [ scc.git] DEBUG Already up to date.
2024-10-16 00:34:39,629 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-10-16 00:34:39,971 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-10-16 00:34:39,971 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-10-16 00:34:39,976 [ scc.git] DEBUG ## Unique users: []
2024-10-16 00:34:39,976 [ scc.git] DEBUG Get sha1 of %s
2024-10-16 00:34:39,976 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:34:39,980 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-16 00:34:39,984 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:34:39,987 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-16 00:34:39,996 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-10-16 00:34:39,997 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-16 00:34:39,999 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-10-16 00:34:39,999 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-10-16 00:34:39,999 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-10-16 00:34:40,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:34:40,134 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-16 00:34:40,170 [ scc.git] DEBUG Get sha1 of %s
2024-10-16 00:34:40,170 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:34:40,174 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-16 00:34:40,209 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-16 00:34:40,214 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8ab226d820> has no local changes
2024-10-16 00:34:40,215 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/203/)'
2024-10-16 00:34:40,222 [ scc.git] DEBUG [detached HEAD b8145e6] merge master -Dorg -Ssuccess-only
2024-10-16 00:34:40,222 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-16 00:34:40,222 [ scc.repo] DEBUG ## PRs found:
2024-10-16 00:34:40,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-10-16 00:34:41,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/431 HTTP/1.1" 200 None
2024-10-16 00:34:41,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-16 00:34:42,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-16 00:34:42,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-16 00:34:43,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-16 00:34:43,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0e500ec05bf9227b66b28a480b40e0936241d953?per_page=1 HTTP/1.1" 200 None
2024-10-16 00:34:44,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-16 00:34:44,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/status HTTP/1.1" 200 None
2024-10-16 00:34:44,606 [ scc.repo] DEBUG - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-16 00:34:45,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None
2024-10-16 00:34:45,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None
2024-10-16 00:34:46,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None
2024-10-16 00:34:46,003 [ scc.repo] DEBUG # ... Include label: include
2024-10-16 00:34:46,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-16 00:34:46,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-16 00:34:47,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-16 00:34:47,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-16 00:34:48,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1?per_page=1 HTTP/1.1" 200 None
2024-10-16 00:34:48,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-16 00:34:49,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/status HTTP/1.1" 200 None
2024-10-16 00:34:49,193 [ scc.repo] DEBUG - PR 427 Rdornier 'Add fileset folder creation'
2024-10-16 00:34:49,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-10-16 00:34:50,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-10-16 00:34:50,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-16 00:34:51,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-16 00:34:51,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-16 00:34:52,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-16 00:34:52,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-10-16 00:34:52,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-16 00:34:53,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-10-16 00:34:53,274 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-10-16 00:34:53,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-10-16 00:34:54,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-10-16 00:34:54,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-10-16 00:34:55,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-16 00:34:55,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-16 00:34:55,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-10-16 00:34:56,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-16 00:34:56,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-16 00:34:57,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-16 00:34:57,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-16 00:34:58,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-10-16 00:34:58,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-16 00:34:59,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-10-16 00:34:59,094 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-10-16 00:34:59,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-10-16 00:34:59,548 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-10-16 00:34:59,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-10-16 00:35:00,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-10-16 00:35:01,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-16 00:35:01,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-16 00:35:02,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-16 00:35:02,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-10-16 00:35:02,442 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-16 00:35:02,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-10-16 00:35:03,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-10-16 00:35:03,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-16 00:35:04,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-16 00:35:04,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-16 00:35:05,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-16 00:35:05,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-10-16 00:35:06,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-16 00:35:06,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-10-16 00:35:06,577 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-10-16 00:35:07,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-10-16 00:35:07,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-10-16 00:35:07,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-10-16 00:35:08,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-10-16 00:35:08,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-16 00:35:09,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-16 00:35:09,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-16 00:35:10,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-10-16 00:35:10,331 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-16 00:35:10,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-10-16 00:35:11,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-16 00:35:11,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-16 00:35:12,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-16 00:35:12,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-10-16 00:35:12,651 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-16 00:35:13,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-10-16 00:35:13,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-10-16 00:35:14,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-16 00:35:14,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-16 00:35:14,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-16 00:35:15,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-10-16 00:35:15,406 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-16 00:35:15,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-10-16 00:35:16,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-10-16 00:35:16,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-16 00:35:17,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-16 00:35:17,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-16 00:35:18,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-10-16 00:35:18,057 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-10-16 00:35:18,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-10-16 00:35:18,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-10-16 00:35:19,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-10-16 00:35:19,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-10-16 00:35:19,873 [ scc.repo] DEBUG ## Branches found:
2024-10-16 00:35:19,873 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-16 00:35:19,873 [ scc.git] DEBUG Get sha1 of %s
2024-10-16 00:35:19,873 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:35:19,878 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-16 00:35:19,881 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-16 00:35:19,881 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-16 00:35:19,886 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-16 00:35:19,890 [ scc.git] DEBUG Already up to date.
2024-10-16 00:35:19,890 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-10-16 00:35:20,457 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-16 00:35:20,457 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-10-16 00:35:20,461 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-10-16 00:35:20,794 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-16 00:35:20,794 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-10-16 00:35:20,798 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-10-16 00:35:21,280 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-16 00:35:21,280 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-10-16 00:35:21,284 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-10-16 00:35:21,576 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-16 00:35:21,576 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-10-16 00:35:21,580 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-10-16 00:35:21,996 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-16 00:35:21,996 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-10-16 00:35:22,000 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-10-16 00:35:22,293 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-16 00:35:22,293 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-10-16 00:35:22,297 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-10-16 00:35:22,583 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-16 00:35:22,583 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-10-16 00:35:22,587 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-10-16 00:35:22,954 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-16 00:35:22,955 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-10-16 00:35:22,959 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head'
2024-10-16 00:35:23,810 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-16 00:35:23,810 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD
2024-10-16 00:35:23,815 [ scc.git] DEBUG Calling 'git fetch origin pull/431/head'
2024-10-16 00:35:24,174 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-16 00:35:24,174 [ scc.git] DEBUG * branch refs/pull/431/head -> FETCH_HEAD
2024-10-16 00:35:24,178 [ scc.git] DEBUG ## Unique users: []
2024-10-16 00:35:24,178 [ scc.git] DEBUG Get sha1 of %s
2024-10-16 00:35:24,178 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:35:24,182 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-16 00:35:24,193 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:35:24,196 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-16 00:35:24,367 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-10-16 00:35:24,367 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-10-16 00:35:24,368 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-16 00:35:24,372 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-10-16 00:35:24,372 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-10-16 00:35:24,372 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-10-16 00:35:24,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:35:24,502 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-16 00:35:24,514 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:35:24,517 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-16 00:35:24,789 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-16 00:35:24,790 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-10-16 00:35:24,790 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-16 00:35:24,797 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-10-16 00:35:24,797 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-10-16 00:35:24,797 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-10-16 00:35:24,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:35:24,930 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-16 00:35:24,941 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:35:24,945 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-16 00:35:24,988 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-10-16 00:35:24,989 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-16 00:35:24,992 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-10-16 00:35:24,992 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-10-16 00:35:25,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:35:25,308 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-16 00:35:25,319 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:35:25,323 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-16 00:35:25,548 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-10-16 00:35:25,548 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-10-16 00:35:25,549 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-16 00:35:25,552 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-10-16 00:35:25,552 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-10-16 00:35:25,552 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-10-16 00:35:25,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:35:25,688 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-16 00:35:25,700 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:35:25,704 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-16 00:35:25,732 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-16 00:35:25,734 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-10-16 00:35:25,735 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-10-16 00:35:25,735 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-10-16 00:35:25,735 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-10-16 00:35:25,735 [ scc.git] DEBUG create mode 100644 connect.py
2024-10-16 00:35:26,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:35:26,066 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-16 00:35:26,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:35:26,080 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-16 00:35:26,111 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-10-16 00:35:26,112 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-16 00:35:26,115 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-10-16 00:35:26,115 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-10-16 00:35:26,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:35:26,446 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-10-16 00:35:26,457 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:35:26,461 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-10-16 00:35:26,551 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-10-16 00:35:26,552 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-16 00:35:26,556 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-10-16 00:35:26,556 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-10-16 00:35:26,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:35:26,834 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-16 00:35:26,845 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:35:26,849 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-16 00:35:26,916 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-16 00:35:26,917 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-16 00:35:26,923 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-10-16 00:35:26,924 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-10-16 00:35:27,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:35:27,221 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-16 00:35:27,232 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:35:27,236 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-16 00:35:27,283 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-16 00:35:27,286 [ scc.git] DEBUG .gitignore | 1 +
2024-10-16 00:35:27,286 [ scc.git] DEBUG src/omero/plugins/download.py | 17 ++++++++++++-----
2024-10-16 00:35:27,286 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 5 deletions(-)
2024-10-16 00:35:27,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:35:27,603 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-16 00:35:27,614 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:35:27,618 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 431 (omero.HdfStorage.update: add size check on data.rowNumbers) 0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-16 00:35:27,636 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-16 00:35:27,638 [ scc.git] DEBUG src/omero/hdfstorageV2.py | 1 +
2024-10-16 00:35:27,638 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2024-10-16 00:35:27,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:35:27,991 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-16 00:35:28,029 [ scc.git] DEBUG Get sha1 of %s
2024-10-16 00:35:28,030 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:35:28,034 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-16 00:35:28,073 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-16 00:35:28,080 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8ab120ac70> has no local changes
2024-10-16 00:35:28,080 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Generated by OMERO-python-superbuild-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/203/)'
2024-10-16 00:35:28,089 [ scc.git] DEBUG [detached HEAD 8567e500] merge master -Dorg -Ssuccess-only
2024-10-16 00:35:28,089 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-16 00:35:28,090 [ scc.git] INFO Overriding base-branch from master to develop
2024-10-16 00:35:28,090 [ scc.repo] DEBUG ## PRs found:
2024-10-16 00:35:28,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-10-16 00:35:29,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-10-16 00:35:29,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2024-10-16 00:35:30,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-16 00:35:30,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-16 00:35:30,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-16 00:35:31,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-16 00:35:31,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-10-16 00:35:31,703 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-16 00:35:32,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-10-16 00:35:32,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-10-16 00:35:33,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-10-16 00:35:33,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-10-16 00:35:34,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-10-16 00:35:34,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-10-16 00:35:35,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-16 00:35:35,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-16 00:35:35,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-16 00:35:36,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-10-16 00:35:36,282 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-16 00:35:36,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-10-16 00:35:37,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-10-16 00:35:37,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-10-16 00:35:38,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-10-16 00:35:38,259 [ scc.repo] DEBUG ## Branches found:
2024-10-16 00:35:38,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-16 00:35:38,259 [ scc.git] DEBUG Get sha1 of %s
2024-10-16 00:35:38,259 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:35:38,264 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-10-16 00:35:38,268 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-16 00:35:38,268 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-10-16 00:35:38,272 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-10-16 00:35:38,276 [ scc.git] DEBUG Already up to date.
2024-10-16 00:35:38,276 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-10-16 00:35:39,071 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-16 00:35:39,071 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-10-16 00:35:39,075 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-10-16 00:35:39,700 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-16 00:35:39,701 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-10-16 00:35:39,705 [ scc.git] DEBUG ## Unique users: []
2024-10-16 00:35:39,705 [ scc.git] DEBUG Get sha1 of %s
2024-10-16 00:35:39,705 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:35:39,709 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-16 00:35:39,715 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:35:39,718 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-16 00:35:39,822 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-10-16 00:35:39,822 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-10-16 00:35:39,822 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-10-16 00:35:39,823 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-10-16 00:35:39,827 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-16 00:35:39,832 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-16 00:35:39,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:35:39,969 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-16 00:35:39,975 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-16 00:35:39,979 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#203](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/203/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/203/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-10-16 00:35:39,983 [ scc.config] DEBUG Found github.token
2024-10-16 00:35:39,983 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-10-16 00:35:39,983 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-16 00:35:39,987 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:35:39,990 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-16 00:35:39,998 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-16 00:35:40,001 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-10-16 00:35:40,001 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-10-16 00:35:40,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:35:40,346 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-16 00:35:40,383 [ scc.git] DEBUG Get sha1 of %s
2024-10-16 00:35:40,383 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:35:40,387 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-16 00:35:40,421 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-16 00:35:40,426 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8ab121dbe0> has no local changes
2024-10-16 00:35:40,426 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/203/)'
2024-10-16 00:35:40,433 [ scc.git] DEBUG [detached HEAD 130ade9] merge master -Dorg -Ssuccess-only
2024-10-16 00:35:40,433 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-16 00:35:40,433 [ scc.repo] DEBUG ## PRs found:
2024-10-16 00:35:40,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-10-16 00:35:41,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/585 HTTP/1.1" 200 None
2024-10-16 00:35:41,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583 HTTP/1.1" 200 None
2024-10-16 00:35:42,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-16 00:35:42,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-16 00:35:43,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-16 00:35:43,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-16 00:35:44,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/aa50f469842b9687c74df8765d72241e6e37d32c?per_page=1 HTTP/1.1" 200 None
2024-10-16 00:35:44,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-16 00:35:45,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/status HTTP/1.1" 200 None
2024-10-16 00:35:45,217 [ scc.repo] DEBUG - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-16 00:35:45,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581 HTTP/1.1" 200 None
2024-10-16 00:35:46,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581/comments HTTP/1.1" 200 None
2024-10-16 00:35:46,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/580 HTTP/1.1" 200 None
2024-10-16 00:35:47,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-16 00:35:47,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-16 00:35:48,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-16 00:35:48,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-16 00:35:48,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc?per_page=1 HTTP/1.1" 200 None
2024-10-16 00:35:49,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-16 00:35:49,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/status HTTP/1.1" 200 None
2024-10-16 00:35:49,981 [ scc.repo] DEBUG - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-16 00:35:50,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568 HTTP/1.1" 200 None
2024-10-16 00:35:50,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568/comments HTTP/1.1" 200 None
2024-10-16 00:35:51,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-10-16 00:35:51,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-10-16 00:35:52,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-10-16 00:35:52,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-10-16 00:35:53,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-16 00:35:53,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-16 00:35:54,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-16 00:35:54,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-16 00:35:55,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-10-16 00:35:55,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-16 00:35:55,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-10-16 00:35:55,857 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-16 00:35:56,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-10-16 00:35:56,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-10-16 00:35:57,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-16 00:35:57,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-16 00:35:58,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-16 00:35:58,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-16 00:35:59,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-10-16 00:35:59,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-16 00:35:59,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-10-16 00:35:59,921 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-16 00:36:00,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-10-16 00:36:00,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-10-16 00:36:01,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-10-16 00:36:01,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-16 00:36:02,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-16 00:36:02,301 [ scc.repo] DEBUG ## Branches found:
2024-10-16 00:36:02,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-16 00:36:02,301 [ scc.git] DEBUG Get sha1 of %s
2024-10-16 00:36:02,301 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:36:02,305 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-16 00:36:02,309 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-16 00:36:02,309 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-16 00:36:02,329 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-16 00:36:02,334 [ scc.git] DEBUG Already up to date.
2024-10-16 00:36:02,334 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-10-16 00:36:03,373 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-16 00:36:03,373 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-10-16 00:36:03,378 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-10-16 00:36:03,687 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-16 00:36:03,687 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-10-16 00:36:03,692 [ scc.git] DEBUG Calling 'git fetch origin pull/580/head'
2024-10-16 00:36:04,162 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-16 00:36:04,162 [ scc.git] DEBUG * branch refs/pull/580/head -> FETCH_HEAD
2024-10-16 00:36:04,167 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head'
2024-10-16 00:36:04,528 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-16 00:36:04,528 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD
2024-10-16 00:36:04,533 [ scc.git] DEBUG ## Unique users: []
2024-10-16 00:36:04,534 [ scc.git] DEBUG Get sha1 of %s
2024-10-16 00:36:04,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:36:04,538 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-16 00:36:04,544 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:36:04,548 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-16 00:36:04,722 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-10-16 00:36:04,722 [ scc.git] DEBUG Auto-merging setup.py
2024-10-16 00:36:04,723 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-16 00:36:04,726 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-10-16 00:36:04,726 [ scc.git] DEBUG setup.py | 1 +
2024-10-16 00:36:04,726 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-10-16 00:36:04,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:36:04,858 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-16 00:36:04,865 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:36:04,869 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-16 00:36:04,903 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-10-16 00:36:04,904 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-10-16 00:36:04,905 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-16 00:36:04,908 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-10-16 00:36:04,908 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-10-16 00:36:04,908 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-10-16 00:36:05,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:36:05,242 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-16 00:36:05,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:36:05,253 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 580 (omeroweb.webgateway.obj_id_bitmask: handle empty query results) 1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-16 00:36:05,288 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-16 00:36:05,293 [ scc.git] DEBUG omeroweb/webgateway/views.py | 6 ++++++
2024-10-16 00:36:05,293 [ scc.git] DEBUG 1 file changed, 6 insertions(+)
2024-10-16 00:36:05,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:36:05,637 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-16 00:36:05,645 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:36:05,648 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Allow users to click a group name to show data from all users in that group) aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-16 00:36:05,666 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-16 00:36:05,669 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_content.html | 6 +++++-
2024-10-16 00:36:05,669 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_dropdown2.html | 2 --
2024-10-16 00:36:05,669 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 3 deletions(-)
2024-10-16 00:36:06,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:36:06,025 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-16 00:36:06,063 [ scc.git] DEBUG Get sha1 of %s
2024-10-16 00:36:06,063 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-16 00:36:06,067 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-16 00:36:06,102 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-16 00:36:06,111 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8ab016dfa0> has no local changes
2024-10-16 00:36:06,111 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
Generated by OMERO-python-superbuild-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/203/)'
2024-10-16 00:36:06,121 [ scc.git] DEBUG [detached HEAD 31a9b08ee] merge master -Dorg -Ssuccess-only
2024-10-16 00:36:06,121 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-16 00:36:06,121 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-16 00:36:06,166 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-10-16 00:36:06,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:36:06,416 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-10-16 00:36:06,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:36:06,798 [ scc.config] DEBUG Found submodule.omero-py.url
2024-10-16 00:36:07,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:36:07,199 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-10-16 00:36:07,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:36:07,593 [ scc.config] DEBUG Found submodule.omero-web.url
2024-10-16 00:36:07,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-16 00:36:07,972 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-16 00:36:07,995 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8ab250b8b0> has local changes
2024-10-16 00:36:07,995 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
Generated by OMERO-python-superbuild-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/203/)'
2024-10-16 00:36:08,003 [ scc.git] DEBUG [detached HEAD 259e214] merge master -Dorg -Ssuccess-only
2024-10-16 00:36:08,004 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-16 00:36:08,004 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-10-16 00:36:08,004 [ scc.merge] INFO Already up to date.
2024-10-16 00:36:08,004 [ scc.merge] INFO
2024-10-16 00:36:08,004 [ scc.merge] INFO Merged PRs:
2024-10-16 00:36:08,004 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-16 00:36:08,004 [ scc.merge] INFO
2024-10-16 00:36:08,004 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-10-16 00:36:08,004 [ scc.merge] INFO Already up to date.
2024-10-16 00:36:08,004 [ scc.merge] INFO
2024-10-16 00:36:08,004 [ scc.merge] INFO Merged PRs:
2024-10-16 00:36:08,004 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-16 00:36:08,004 [ scc.merge] INFO
2024-10-16 00:36:08,004 [ scc.merge] INFO Repository: ome/omero-marshal
2024-10-16 00:36:08,004 [ scc.merge] INFO Excluded PRs:
2024-10-16 00:36:08,004 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-10-16 00:36:08,004 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-10-16 00:36:08,004 [ scc.merge] INFO Already up to date.
2024-10-16 00:36:08,004 [ scc.merge] INFO
2024-10-16 00:36:08,004 [ scc.merge] INFO Merged PRs:
2024-10-16 00:36:08,004 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-16 00:36:08,005 [ scc.merge] INFO
2024-10-16 00:36:08,005 [ scc.merge] INFO Repository: ome/omero-py
2024-10-16 00:36:08,005 [ scc.merge] INFO Excluded PRs:
2024-10-16 00:36:08,005 [ scc.merge] INFO - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
2024-10-16 00:36:08,005 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-10-16 00:36:08,005 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-10-16 00:36:08,005 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-10-16 00:36:08,005 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-10-16 00:36:08,005 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-10-16 00:36:08,005 [ scc.merge] INFO Already up to date.
2024-10-16 00:36:08,005 [ scc.merge] INFO
2024-10-16 00:36:08,005 [ scc.merge] INFO Merged PRs:
2024-10-16 00:36:08,005 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-10-16 00:36:08,005 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-16 00:36:08,005 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-16 00:36:08,005 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-16 00:36:08,005 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-10-16 00:36:08,005 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-16 00:36:08,005 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-10-16 00:36:08,005 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-10-16 00:36:08,005 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation'
2024-10-16 00:36:08,005 [ scc.merge] INFO - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-16 00:36:08,005 [ scc.merge] INFO
2024-10-16 00:36:08,005 [ scc.merge] INFO Repository: ome/omero-scripts
2024-10-16 00:36:08,005 [ scc.merge] INFO Excluded PRs:
2024-10-16 00:36:08,005 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-10-16 00:36:08,005 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-10-16 00:36:08,005 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-10-16 00:36:08,005 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-10-16 00:36:08,005 [ scc.merge] INFO Already up to date.
2024-10-16 00:36:08,005 [ scc.merge] INFO
2024-10-16 00:36:08,005 [ scc.merge] INFO Merged PRs:
2024-10-16 00:36:08,005 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-16 00:36:08,005 [ scc.merge] INFO
2024-10-16 00:36:08,005 [ scc.merge] INFO Conflicting PRs (not included):
2024-10-16 00:36:08,005 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-16 00:36:08,006 [ scc.merge] INFO
2024-10-16 00:36:08,006 [ scc.merge] INFO Repository: ome/omero-web
2024-10-16 00:36:08,006 [ scc.merge] INFO Excluded PRs:
2024-10-16 00:36:08,006 [ scc.merge] INFO - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-10-16 00:36:08,006 [ scc.merge] INFO - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
2024-10-16 00:36:08,006 [ scc.merge] INFO - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
2024-10-16 00:36:08,006 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-10-16 00:36:08,006 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-10-16 00:36:08,006 [ scc.merge] INFO Already up to date.
2024-10-16 00:36:08,006 [ scc.merge] INFO
2024-10-16 00:36:08,006 [ scc.merge] INFO Merged PRs:
2024-10-16 00:36:08,006 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-16 00:36:08,006 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-16 00:36:08,006 [ scc.merge] INFO - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-16 00:36:08,006 [ scc.merge] INFO - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-16 00:36:08,006 [ scc.merge] INFO
2024-10-16 00:36:08,006 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-16 00:36:08,006 [ scc.git] DEBUG Calling 'git remote'
2024-10-16 00:36:08,009 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-16 00:36:08,010 [ scc.git] DEBUG Calling 'git remote'
2024-10-16 00:36:08,013 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-16 00:36:08,013 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-16 00:36:08,013 [ scc.git] DEBUG Calling 'git remote'
2024-10-16 00:36:08,017 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-16 00:36:08,017 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-16 00:36:08,017 [ scc.git] DEBUG Calling 'git remote'
2024-10-16 00:36:08,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-16 00:36:08,021 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-16 00:36:08,021 [ scc.git] DEBUG Calling 'git remote'
2024-10-16 00:36:08,024 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-16 00:36:08,024 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-16 00:36:08,024 [ scc.git] DEBUG Calling 'git remote'
2024-10-16 00:36:08,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 4fd72efa
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from da5b7d11f
nothing to commit, working tree clean
HEAD detached from e849d72
nothing to commit, working tree clean
2024-10-16 00:36:35,603 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
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