Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-10-18 06:50:19,367 [ scc.config] DEBUG Found github.token
2024-10-18 06:50:19,369 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-18 06:50:19,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:50:19,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:50:20,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-18 06:50:20,363 [ scc.gh] DEBUG 4998 remaining from 5000 (Reset at 07:10
2024-10-18 06:50:20,363 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-18 06:50:20,367 [ scc.git] DEBUG Check current status
2024-10-18 06:50:20,367 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-18 06:50:20,370 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-18 06:50:20,370 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-18 06:50:20,405 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-18 06:50:20,408 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-18 06:50:20,411 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-18 06:50:20,415 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-18 06:50:20,418 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-18 06:50:20,421 [ scc.config] DEBUG Found remote.origin.url
2024-10-18 06:50:20,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-18 06:50:21,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-18 06:50:21,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-18 06:50:22,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-18 06:50:22,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-18 06:50:22,513 [ scc.git] DEBUG Resetting...
2024-10-18 06:50:22,513 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-18 06:50:22,520 [ scc.git] DEBUG HEAD is now at e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-18 06:50:22,520 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-18 06:50:22,567 [ scc.git] DEBUG Check current status
2024-10-18 06:50:22,567 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-18 06:50:22,572 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-18 06:50:22,572 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-18 06:50:22,607 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-18 06:50:22,610 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-18 06:50:22,613 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-18 06:50:22,617 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-18 06:50:22,620 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-18 06:50:22,620 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-18 06:50:22,621 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-18 06:50:22,621 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-18 06:50:22,621 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-18 06:50:22,621 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-18 06:50:22,621 [ scc.repo] DEBUG ## PRs found:
2024-10-18 06:50:22,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-18 06:50:23,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-18 06:50:23,409 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-18 06:50:23,410 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-18 06:50:23,410 [ scc.repo] DEBUG ## Branches found:
2024-10-18 06:50:23,410 [ scc.git] DEBUG Get sha1 of %s
2024-10-18 06:50:23,410 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:50:23,415 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-18 06:50:23,418 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-18 06:50:23,419 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-18 06:50:23,422 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-18 06:50:23,427 [ scc.git] DEBUG Already up to date.
2024-10-18 06:50:23,427 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-18 06:50:23,736 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-18 06:50:23,736 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-18 06:50:23,740 [ scc.git] DEBUG ## Unique users: []
2024-10-18 06:50:23,741 [ scc.git] DEBUG Get sha1 of %s
2024-10-18 06:50:23,741 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:50:23,745 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-18 06:50:23,749 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:50:23,752 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-18 06:50:23,760 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-18 06:50:23,762 [ scc.git] DEBUG omero-py | 2 +-
2024-10-18 06:50:23,762 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-10-18 06:50:23,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:50:23,895 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-18 06:50:24,106 [ scc.git] DEBUG Submodule path 'omero-py': checked out '4fd72efaa8cdbec9da98e1d28678af16878a86ba'
2024-10-18 06:50:24,107 [ scc.git] DEBUG Get sha1 of %s
2024-10-18 06:50:24,107 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:50:24,111 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-18 06:50:24,336 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f01008fd8b0> has no local changes
2024-10-18 06:50:24,337 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Generated by OMERO-python-superbuild-push#205 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/205/)'
2024-10-18 06:50:24,362 [ scc.git] DEBUG [detached HEAD 2f51a18] merge master -Dorg -Snone
2024-10-18 06:50:24,362 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-18 06:50:24,362 [ scc.merge] INFO Already up to date.
2024-10-18 06:50:24,362 [ scc.merge] INFO
2024-10-18 06:50:24,362 [ scc.merge] INFO Merged PRs:
2024-10-18 06:50:24,362 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-18 06:50:24,362 [ scc.merge] INFO
2024-10-18 06:50:24,362 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-18 06:50:24,362 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-18 06:50:26,480 [ scc.config] DEBUG Found github.token
2024-10-18 06:50:26,482 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-18 06:50:26,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:50:27,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:50:27,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-18 06:50:27,412 [ scc.gh] DEBUG 4988 remaining from 5000 (Reset at 07:10
2024-10-18 06:50:27,412 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-18 06:50:27,416 [ scc.git] DEBUG Check current status
2024-10-18 06:50:27,417 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-18 06:50:27,420 [ scc.git] DEBUG 2f51a18 merge master -Dorg -Snone
2024-10-18 06:50:27,420 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-18 06:50:27,457 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-18 06:50:27,459 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-18 06:50:27,463 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-18 06:50:27,467 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-18 06:50:27,470 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-18 06:50:27,474 [ scc.config] DEBUG Found remote.origin.url
2024-10-18 06:50:27,475 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-10-18 06:50:27,476 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-18 06:50:27,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-18 06:50:28,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-18 06:50:28,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-18 06:50:29,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-18 06:50:29,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-18 06:50:29,542 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-18 06:50:29,586 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-18 06:50:29,586 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-18 06:50:29,590 [ scc.git] DEBUG Check current status
2024-10-18 06:50:29,590 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-18 06:50:29,593 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-10-18 06:50:29,593 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-18 06:50:29,630 [ scc.config] DEBUG Found remote.origin.url
2024-10-18 06:50:30,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-10-18 06:50:30,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-18 06:50:30,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-18 06:50:31,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-18 06:50:31,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-18 06:50:31,722 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-18 06:50:31,757 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-18 06:50:31,757 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-18 06:50:31,757 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-18 06:50:31,760 [ scc.git] DEBUG Check current status
2024-10-18 06:50:31,760 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-18 06:50:31,764 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-10-18 06:50:31,764 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-18 06:50:31,799 [ scc.config] DEBUG Found remote.origin.url
2024-10-18 06:50:32,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-10-18 06:50:32,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-18 06:50:33,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-18 06:50:33,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-18 06:50:33,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-18 06:50:33,859 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-18 06:50:33,895 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-18 06:50:33,896 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-18 06:50:33,896 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-18 06:50:33,899 [ scc.git] DEBUG Check current status
2024-10-18 06:50:33,899 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-18 06:50:33,903 [ scc.git] DEBUG 4fd72efa Bump version: 5.19.5 → 5.19.6.dev0
2024-10-18 06:50:33,903 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-18 06:50:33,939 [ scc.config] DEBUG Found remote.origin.url
2024-10-18 06:50:34,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-10-18 06:50:34,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-18 06:50:35,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-18 06:50:35,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-18 06:50:36,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-18 06:50:36,044 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-18 06:50:36,079 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-18 06:50:36,080 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-18 06:50:36,080 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-18 06:50:36,083 [ scc.git] DEBUG Check current status
2024-10-18 06:50:36,084 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-18 06:50:36,087 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-18 06:50:36,087 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-18 06:50:36,123 [ scc.config] DEBUG Found remote.origin.url
2024-10-18 06:50:36,123 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-10-18 06:50:36,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-10-18 06:50:36,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-18 06:50:37,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-18 06:50:37,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-18 06:50:38,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-18 06:50:38,104 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-18 06:50:38,140 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-18 06:50:38,141 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-18 06:50:38,141 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-18 06:50:38,145 [ scc.git] DEBUG Check current status
2024-10-18 06:50:38,145 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-18 06:50:38,149 [ scc.git] DEBUG da5b7d11f Bump version: 5.27.2 → 5.27.3.dev0
2024-10-18 06:50:38,149 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-18 06:50:38,187 [ scc.config] DEBUG Found remote.origin.url
2024-10-18 06:50:38,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-10-18 06:50:39,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-18 06:50:39,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-18 06:50:39,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-18 06:50:40,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-18 06:50:40,233 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-18 06:50:40,269 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-18 06:50:40,269 [ scc.git] DEBUG Resetting...
2024-10-18 06:50:40,269 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-18 06:50:40,274 [ scc.git] DEBUG HEAD is now at 2f51a18 merge master -Dorg -Snone
2024-10-18 06:50:40,275 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-18 06:50:40,322 [ scc.git] DEBUG Check current status
2024-10-18 06:50:40,322 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-18 06:50:40,326 [ scc.git] DEBUG 2f51a18 merge master -Dorg -Snone
2024-10-18 06:50:40,326 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-18 06:50:40,361 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-18 06:50:40,364 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-18 06:50:40,367 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-18 06:50:40,370 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-18 06:50:40,374 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-18 06:50:40,374 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-18 06:50:40,374 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-18 06:50:40,374 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-18 06:50:40,374 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-18 06:50:40,375 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-18 06:50:40,375 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-10-18 06:50:40,375 [ scc.repo] DEBUG ## PRs found:
2024-10-18 06:50:40,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-18 06:50:41,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-18 06:50:41,173 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-18 06:50:41,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-18 06:50:42,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-18 06:50:42,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-18 06:50:43,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/9660559833988d271074de56e54f2462a7be74e9?per_page=1 HTTP/1.1" 200 2
2024-10-18 06:50:43,185 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-18 06:50:43,185 [ scc.repo] DEBUG ## Branches found:
2024-10-18 06:50:43,185 [ scc.git] DEBUG Get sha1 of %s
2024-10-18 06:50:43,185 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:50:43,190 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-18 06:50:43,194 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-18 06:50:43,194 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-18 06:50:43,198 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-18 06:50:43,202 [ scc.git] DEBUG Already up to date.
2024-10-18 06:50:43,202 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-18 06:50:43,536 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-18 06:50:43,536 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-18 06:50:43,540 [ scc.git] DEBUG ## Unique users: []
2024-10-18 06:50:43,540 [ scc.git] DEBUG Get sha1 of %s
2024-10-18 06:50:43,540 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:50:43,544 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-18 06:50:43,547 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:50:43,551 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-18 06:50:43,554 [ scc.git] DEBUG Already up to date.
2024-10-18 06:50:43,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:50:43,697 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-18 06:50:43,732 [ scc.git] DEBUG Get sha1 of %s
2024-10-18 06:50:43,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:50:43,737 [ scc.repo] DEBUG ## PRs found:
2024-10-18 06:50:44,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-10-18 06:50:44,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-10-18 06:50:45,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-10-18 06:50:45,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-18 06:50:46,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-18 06:50:46,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-18 06:50:46,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-10-18 06:50:46,928 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-18 06:50:46,928 [ scc.repo] DEBUG ## Branches found:
2024-10-18 06:50:46,928 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-18 06:50:46,929 [ scc.git] DEBUG Get sha1 of %s
2024-10-18 06:50:46,929 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:50:46,933 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-18 06:50:46,937 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-18 06:50:46,937 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-18 06:50:46,941 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-18 06:50:46,945 [ scc.git] DEBUG Already up to date.
2024-10-18 06:50:46,945 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-10-18 06:50:47,286 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-10-18 06:50:47,287 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-10-18 06:50:47,291 [ scc.git] DEBUG ## Unique users: []
2024-10-18 06:50:47,291 [ scc.git] DEBUG Get sha1 of %s
2024-10-18 06:50:47,291 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:50:47,295 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-18 06:50:47,299 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:50:47,303 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-18 06:50:47,388 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-10-18 06:50:47,388 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-10-18 06:50:47,388 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-10-18 06:50:47,388 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-10-18 06:50:47,388 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-10-18 06:50:47,388 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-10-18 06:50:47,388 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-10-18 06:50:47,388 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-10-18 06:50:47,388 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-10-18 06:50:47,389 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-18 06:50:47,392 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-10-18 06:50:47,392 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-10-18 06:50:47,392 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-10-18 06:50:47,393 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-10-18 06:50:47,393 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-10-18 06:50:47,393 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-10-18 06:50:47,393 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-10-18 06:50:47,393 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-10-18 06:50:47,393 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-10-18 06:50:47,395 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-10-18 06:50:47,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:50:47,527 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-18 06:50:47,564 [ scc.git] DEBUG Get sha1 of %s
2024-10-18 06:50:47,564 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:50:47,568 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-18 06:50:47,603 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-18 06:50:47,609 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f48504dee20> has no local changes
2024-10-18 06:50:47,609 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#205 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/205/)'
2024-10-18 06:50:47,617 [ scc.git] DEBUG [detached HEAD 54ec389] merge master -Dorg -Ssuccess-only
2024-10-18 06:50:47,617 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-18 06:50:47,617 [ scc.repo] DEBUG ## PRs found:
2024-10-18 06:50:48,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-10-18 06:50:48,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-10-18 06:50:48,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-10-18 06:50:49,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-18 06:50:49,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-18 06:50:50,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-18 06:50:50,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-10-18 06:50:50,744 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-18 06:50:51,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-10-18 06:50:51,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-10-18 06:50:52,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-10-18 06:50:52,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-10-18 06:50:52,664 [ scc.repo] DEBUG ## Branches found:
2024-10-18 06:50:52,664 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-18 06:50:52,664 [ scc.git] DEBUG Get sha1 of %s
2024-10-18 06:50:52,664 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:50:52,668 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-18 06:50:52,672 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-18 06:50:52,672 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-18 06:50:52,676 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-18 06:50:52,680 [ scc.git] DEBUG Already up to date.
2024-10-18 06:50:52,680 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-10-18 06:50:53,237 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-10-18 06:50:53,237 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-10-18 06:50:53,241 [ scc.git] DEBUG ## Unique users: []
2024-10-18 06:50:53,241 [ scc.git] DEBUG Get sha1 of %s
2024-10-18 06:50:53,241 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:50:53,245 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-18 06:50:53,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:50:53,253 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-18 06:50:53,262 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-10-18 06:50:53,263 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-18 06:50:53,266 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-10-18 06:50:53,266 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-10-18 06:50:53,266 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-10-18 06:50:53,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:50:53,398 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-18 06:50:53,435 [ scc.git] DEBUG Get sha1 of %s
2024-10-18 06:50:53,435 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:50:53,439 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-18 06:50:53,472 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-18 06:50:53,477 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4851552820> has no local changes
2024-10-18 06:50:53,478 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#205 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/205/)'
2024-10-18 06:50:53,484 [ scc.git] DEBUG [detached HEAD ff7bdd4] merge master -Dorg -Ssuccess-only
2024-10-18 06:50:53,485 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-18 06:50:53,485 [ scc.repo] DEBUG ## PRs found:
2024-10-18 06:50:54,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-10-18 06:50:54,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/431 HTTP/1.1" 200 None
2024-10-18 06:50:55,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-18 06:50:55,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-18 06:50:56,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-18 06:50:56,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-18 06:50:57,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0e500ec05bf9227b66b28a480b40e0936241d953?per_page=1 HTTP/1.1" 200 None
2024-10-18 06:50:57,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-18 06:50:57,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/status HTTP/1.1" 200 None
2024-10-18 06:50:57,939 [ scc.repo] DEBUG - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-18 06:50:58,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None
2024-10-18 06:50:58,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None
2024-10-18 06:50:59,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None
2024-10-18 06:50:59,326 [ scc.repo] DEBUG # ... Include label: include
2024-10-18 06:50:59,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-18 06:51:00,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-18 06:51:00,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-18 06:51:01,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-18 06:51:01,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1?per_page=1 HTTP/1.1" 200 None
2024-10-18 06:51:02,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-18 06:51:02,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/status HTTP/1.1" 200 None
2024-10-18 06:51:02,531 [ scc.repo] DEBUG - PR 427 Rdornier 'Add fileset folder creation'
2024-10-18 06:51:02,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-10-18 06:51:03,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-10-18 06:51:03,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-18 06:51:04,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-18 06:51:04,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-18 06:51:05,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-18 06:51:05,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-10-18 06:51:06,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-18 06:51:06,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-10-18 06:51:06,614 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-10-18 06:51:07,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-10-18 06:51:07,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-10-18 06:51:08,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-10-18 06:51:08,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-18 06:51:09,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-18 06:51:09,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-10-18 06:51:09,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-18 06:51:10,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-18 06:51:10,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-18 06:51:11,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-18 06:51:11,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-10-18 06:51:12,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-18 06:51:12,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-10-18 06:51:12,727 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-10-18 06:51:13,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-10-18 06:51:13,197 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-10-18 06:51:13,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-10-18 06:51:14,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-10-18 06:51:14,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-18 06:51:15,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-18 06:51:15,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-18 06:51:15,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-10-18 06:51:15,881 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-18 06:51:16,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-10-18 06:51:16,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-10-18 06:51:17,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-18 06:51:17,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-18 06:51:18,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-18 06:51:18,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-18 06:51:19,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-10-18 06:51:19,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-18 06:51:19,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-10-18 06:51:19,995 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-10-18 06:51:20,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-10-18 06:51:20,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-10-18 06:51:21,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-10-18 06:51:21,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-10-18 06:51:22,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-18 06:51:22,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-18 06:51:23,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-18 06:51:23,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-10-18 06:51:23,711 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-18 06:51:24,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-10-18 06:51:24,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-18 06:51:25,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-18 06:51:25,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-18 06:51:25,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-10-18 06:51:25,988 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-18 06:51:26,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-10-18 06:51:26,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-10-18 06:51:27,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-18 06:51:27,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-18 06:51:28,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-18 06:51:28,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-10-18 06:51:28,902 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-18 06:51:29,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-10-18 06:51:29,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-10-18 06:51:30,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-18 06:51:30,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-18 06:51:31,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-18 06:51:31,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-10-18 06:51:31,759 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-10-18 06:51:32,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-10-18 06:51:32,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-10-18 06:51:33,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-10-18 06:51:33,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-10-18 06:51:33,618 [ scc.repo] DEBUG ## Branches found:
2024-10-18 06:51:33,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-18 06:51:33,618 [ scc.git] DEBUG Get sha1 of %s
2024-10-18 06:51:33,618 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:51:33,623 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-18 06:51:33,627 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-18 06:51:33,627 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-18 06:51:33,631 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-18 06:51:33,635 [ scc.git] DEBUG Already up to date.
2024-10-18 06:51:33,636 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-10-18 06:51:33,986 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-18 06:51:33,986 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-10-18 06:51:33,990 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-10-18 06:51:34,302 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-18 06:51:34,302 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-10-18 06:51:34,306 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-10-18 06:51:34,600 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-18 06:51:34,600 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-10-18 06:51:34,605 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-10-18 06:51:34,920 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-18 06:51:34,920 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-10-18 06:51:34,925 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-10-18 06:51:35,210 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-18 06:51:35,210 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-10-18 06:51:35,214 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-10-18 06:51:35,498 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-18 06:51:35,498 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-10-18 06:51:35,502 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-10-18 06:51:35,940 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-18 06:51:35,940 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-10-18 06:51:35,944 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-10-18 06:51:36,418 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-18 06:51:36,418 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-10-18 06:51:36,423 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head'
2024-10-18 06:51:36,880 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-18 06:51:36,880 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD
2024-10-18 06:51:36,885 [ scc.git] DEBUG Calling 'git fetch origin pull/431/head'
2024-10-18 06:51:37,171 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-18 06:51:37,171 [ scc.git] DEBUG * branch refs/pull/431/head -> FETCH_HEAD
2024-10-18 06:51:37,176 [ scc.git] DEBUG ## Unique users: []
2024-10-18 06:51:37,176 [ scc.git] DEBUG Get sha1 of %s
2024-10-18 06:51:37,176 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:51:37,181 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-18 06:51:37,191 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:51:37,194 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-18 06:51:37,214 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-10-18 06:51:37,214 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-10-18 06:51:37,215 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-18 06:51:37,218 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-10-18 06:51:37,218 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-10-18 06:51:37,218 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-10-18 06:51:37,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:51:37,347 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-18 06:51:37,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:51:37,362 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-18 06:51:37,393 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-18 06:51:37,393 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-10-18 06:51:37,394 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-18 06:51:37,400 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-10-18 06:51:37,400 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-10-18 06:51:37,400 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-10-18 06:51:37,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:51:37,729 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-18 06:51:37,740 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:51:37,744 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-18 06:51:37,764 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-10-18 06:51:37,765 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-18 06:51:37,768 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-10-18 06:51:37,768 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-10-18 06:51:38,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:51:38,114 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-18 06:51:38,126 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:51:38,129 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-18 06:51:38,148 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-10-18 06:51:38,148 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-10-18 06:51:38,149 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-18 06:51:38,152 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-10-18 06:51:38,152 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-10-18 06:51:38,152 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-10-18 06:51:38,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:51:38,500 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-18 06:51:38,512 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:51:38,515 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-18 06:51:38,574 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-18 06:51:38,577 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-10-18 06:51:38,577 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-10-18 06:51:38,577 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-10-18 06:51:38,577 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-10-18 06:51:38,577 [ scc.git] DEBUG create mode 100644 connect.py
2024-10-18 06:51:38,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:51:38,892 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-18 06:51:38,904 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:51:38,908 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-18 06:51:39,151 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-10-18 06:51:39,152 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-18 06:51:39,155 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-10-18 06:51:39,155 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-10-18 06:51:39,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:51:39,292 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-10-18 06:51:39,304 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:51:39,308 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-10-18 06:51:39,326 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-10-18 06:51:39,327 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-18 06:51:39,331 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-10-18 06:51:39,331 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-10-18 06:51:39,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:51:39,677 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-18 06:51:39,689 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:51:39,692 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-18 06:51:39,722 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-18 06:51:39,723 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-18 06:51:39,729 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-10-18 06:51:39,729 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-10-18 06:51:40,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:51:40,061 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-18 06:51:40,073 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:51:40,076 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-18 06:51:40,095 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-18 06:51:40,098 [ scc.git] DEBUG .gitignore | 1 +
2024-10-18 06:51:40,098 [ scc.git] DEBUG src/omero/plugins/download.py | 17 ++++++++++++-----
2024-10-18 06:51:40,098 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 5 deletions(-)
2024-10-18 06:51:40,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:51:40,452 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-18 06:51:40,467 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:51:40,471 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 431 (omero.HdfStorage.update: add size check on data.rowNumbers) 0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-18 06:51:40,488 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-18 06:51:40,490 [ scc.git] DEBUG src/omero/hdfstorageV2.py | 1 +
2024-10-18 06:51:40,490 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2024-10-18 06:51:40,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:51:40,872 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-18 06:51:40,909 [ scc.git] DEBUG Get sha1 of %s
2024-10-18 06:51:40,910 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:51:40,913 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-18 06:51:40,948 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-18 06:51:40,954 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f48504efeb0> has no local changes
2024-10-18 06:51:40,954 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Generated by OMERO-python-superbuild-push#205 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/205/)'
2024-10-18 06:51:40,962 [ scc.git] DEBUG [detached HEAD a123d88b] merge master -Dorg -Ssuccess-only
2024-10-18 06:51:40,962 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-18 06:51:40,963 [ scc.git] INFO Overriding base-branch from master to develop
2024-10-18 06:51:40,963 [ scc.repo] DEBUG ## PRs found:
2024-10-18 06:51:41,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-10-18 06:51:41,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-10-18 06:51:42,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2024-10-18 06:51:42,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-18 06:51:43,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-18 06:51:43,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-18 06:51:44,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-18 06:51:44,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-10-18 06:51:44,634 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-18 06:51:45,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-10-18 06:51:45,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-10-18 06:51:46,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-10-18 06:51:46,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-10-18 06:51:47,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-10-18 06:51:47,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-10-18 06:51:48,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-18 06:51:48,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-18 06:51:48,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-18 06:51:49,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-10-18 06:51:49,292 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-18 06:51:49,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-10-18 06:51:50,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-10-18 06:51:50,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-10-18 06:51:51,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-10-18 06:51:51,284 [ scc.repo] DEBUG ## Branches found:
2024-10-18 06:51:51,284 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-18 06:51:51,284 [ scc.git] DEBUG Get sha1 of %s
2024-10-18 06:51:51,284 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:51:51,288 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-10-18 06:51:51,292 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-18 06:51:51,292 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-10-18 06:51:51,296 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-10-18 06:51:51,300 [ scc.git] DEBUG Already up to date.
2024-10-18 06:51:51,301 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-10-18 06:51:51,648 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-18 06:51:51,649 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-10-18 06:51:51,653 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-10-18 06:51:51,979 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-18 06:51:51,979 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-10-18 06:51:51,983 [ scc.git] DEBUG ## Unique users: []
2024-10-18 06:51:51,983 [ scc.git] DEBUG Get sha1 of %s
2024-10-18 06:51:51,983 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:51:51,987 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-18 06:51:51,992 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:51:51,996 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-18 06:51:52,005 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-10-18 06:51:52,005 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-10-18 06:51:52,005 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-10-18 06:51:52,006 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-10-18 06:51:52,010 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-18 06:51:52,014 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-18 06:51:52,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:51:52,152 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-18 06:51:52,159 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-18 06:51:52,163 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#205](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/205/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/205/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-10-18 06:51:52,166 [ scc.config] DEBUG Found github.token
2024-10-18 06:51:52,167 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-10-18 06:51:52,167 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-18 06:51:52,171 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:51:52,174 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-18 06:51:52,182 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-18 06:51:52,185 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-10-18 06:51:52,185 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-10-18 06:51:52,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:51:52,538 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-18 06:51:52,575 [ scc.git] DEBUG Get sha1 of %s
2024-10-18 06:51:52,576 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:51:52,580 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-18 06:51:52,613 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-18 06:51:52,618 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f48504f0df0> has no local changes
2024-10-18 06:51:52,618 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#205 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/205/)'
2024-10-18 06:51:52,627 [ scc.git] DEBUG [detached HEAD 8cbe840] merge master -Dorg -Ssuccess-only
2024-10-18 06:51:52,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-18 06:51:52,628 [ scc.repo] DEBUG ## PRs found:
2024-10-18 06:51:53,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-10-18 06:51:53,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/588 HTTP/1.1" 200 None
2024-10-18 06:51:54,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/588/comments HTTP/1.1" 200 None
2024-10-18 06:51:54,296 [ scc.repo] DEBUG # ... Include label: include
2024-10-18 06:51:54,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66 HTTP/1.1" 200 None
2024-10-18 06:51:55,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-18 06:51:55,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-18 06:51:56,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66 HTTP/1.1" 200 None
2024-10-18 06:51:56,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66?per_page=1 HTTP/1.1" 200 None
2024-10-18 06:51:57,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66 HTTP/1.1" 200 None
2024-10-18 06:51:57,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66/status HTTP/1.1" 200 None
2024-10-18 06:51:57,560 [ scc.repo] DEBUG - PR 588 effigies 'rf(py314): Replace deprecated pkgutil.find_loader'
2024-10-18 06:51:58,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/585 HTTP/1.1" 200 None
2024-10-18 06:51:58,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583 HTTP/1.1" 200 None
2024-10-18 06:51:58,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-18 06:51:59,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-18 06:51:59,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-18 06:52:00,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-18 06:52:00,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/aa50f469842b9687c74df8765d72241e6e37d32c?per_page=1 HTTP/1.1" 200 None
2024-10-18 06:52:01,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-18 06:52:01,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/status HTTP/1.1" 200 None
2024-10-18 06:52:01,751 [ scc.repo] DEBUG - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-18 06:52:02,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581 HTTP/1.1" 200 None
2024-10-18 06:52:02,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581/comments HTTP/1.1" 200 None
2024-10-18 06:52:03,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/580 HTTP/1.1" 200 None
2024-10-18 06:52:03,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-18 06:52:04,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-18 06:52:04,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-18 06:52:05,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-18 06:52:05,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc?per_page=1 HTTP/1.1" 200 None
2024-10-18 06:52:05,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-18 06:52:06,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/status HTTP/1.1" 200 None
2024-10-18 06:52:06,320 [ scc.repo] DEBUG - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-18 06:52:06,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568 HTTP/1.1" 200 None
2024-10-18 06:52:07,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568/comments HTTP/1.1" 200 None
2024-10-18 06:52:07,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-10-18 06:52:08,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-10-18 06:52:08,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-10-18 06:52:08,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-10-18 06:52:09,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-18 06:52:09,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-18 06:52:10,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-18 06:52:10,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-18 06:52:11,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-10-18 06:52:11,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-18 06:52:12,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-10-18 06:52:12,153 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-18 06:52:12,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-10-18 06:52:13,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-10-18 06:52:13,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-18 06:52:14,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-18 06:52:14,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-18 06:52:14,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-18 06:52:15,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-10-18 06:52:15,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-18 06:52:16,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-10-18 06:52:16,216 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-18 06:52:16,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-10-18 06:52:17,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-10-18 06:52:17,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-10-18 06:52:18,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-18 06:52:18,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-18 06:52:18,602 [ scc.repo] DEBUG ## Branches found:
2024-10-18 06:52:18,602 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-18 06:52:18,602 [ scc.git] DEBUG Get sha1 of %s
2024-10-18 06:52:18,602 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:52:18,607 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-18 06:52:18,611 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-18 06:52:18,611 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-18 06:52:18,672 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-18 06:52:18,678 [ scc.git] DEBUG Already up to date.
2024-10-18 06:52:18,678 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-10-18 06:52:19,557 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-18 06:52:19,558 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-10-18 06:52:19,564 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-10-18 06:52:19,846 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-18 06:52:19,846 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-10-18 06:52:19,852 [ scc.git] DEBUG Calling 'git fetch origin pull/580/head'
2024-10-18 06:52:20,164 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-18 06:52:20,164 [ scc.git] DEBUG * branch refs/pull/580/head -> FETCH_HEAD
2024-10-18 06:52:20,169 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head'
2024-10-18 06:52:20,480 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-18 06:52:20,480 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD
2024-10-18 06:52:20,485 [ scc.git] DEBUG Calling 'git fetch origin pull/588/head'
2024-10-18 06:52:20,806 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-18 06:52:20,806 [ scc.git] DEBUG * branch refs/pull/588/head -> FETCH_HEAD
2024-10-18 06:52:20,810 [ scc.git] DEBUG ## Unique users: []
2024-10-18 06:52:20,810 [ scc.git] DEBUG Get sha1 of %s
2024-10-18 06:52:20,811 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:52:20,815 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-18 06:52:20,822 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:52:20,825 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-18 06:52:20,964 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-10-18 06:52:20,964 [ scc.git] DEBUG Auto-merging setup.py
2024-10-18 06:52:20,965 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-18 06:52:20,968 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-10-18 06:52:20,968 [ scc.git] DEBUG setup.py | 1 +
2024-10-18 06:52:20,968 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-10-18 06:52:21,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:52:21,110 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-18 06:52:21,118 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:52:21,122 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-18 06:52:21,316 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-10-18 06:52:21,316 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-10-18 06:52:21,317 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-18 06:52:21,321 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-10-18 06:52:21,321 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-10-18 06:52:21,321 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-10-18 06:52:21,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:52:21,495 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-18 06:52:21,503 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:52:21,507 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 580 (omeroweb.webgateway.obj_id_bitmask: handle empty query results) 1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-18 06:52:21,525 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-18 06:52:21,529 [ scc.git] DEBUG omeroweb/webgateway/views.py | 6 ++++++
2024-10-18 06:52:21,529 [ scc.git] DEBUG 1 file changed, 6 insertions(+)
2024-10-18 06:52:21,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:52:21,892 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-18 06:52:21,900 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:52:21,903 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Allow users to click a group name to show data from all users in that group) aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-18 06:52:21,976 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-18 06:52:21,979 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_content.html | 6 +++++-
2024-10-18 06:52:21,979 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_dropdown2.html | 2 --
2024-10-18 06:52:21,979 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 3 deletions(-)
2024-10-18 06:52:22,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:52:22,276 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66'
2024-10-18 06:52:22,282 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:52:22,286 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 588 (rf(py314): Replace deprecated pkgutil.find_loader) 31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66'
2024-10-18 06:52:22,302 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-18 06:52:22,305 [ scc.git] DEBUG omeroweb/urls.py | 4 ++--
2024-10-18 06:52:22,305 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-)
2024-10-18 06:52:22,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:52:22,658 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-18 06:52:22,693 [ scc.git] DEBUG Get sha1 of %s
2024-10-18 06:52:22,693 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-18 06:52:22,697 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-18 06:52:22,730 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-18 06:52:22,738 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4850456640> has no local changes
2024-10-18 06:52:22,738 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
- PR 588 effigies 'rf(py314): Replace deprecated pkgutil.find_loader'
Generated by OMERO-python-superbuild-push#205 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/205/)'
2024-10-18 06:52:22,747 [ scc.git] DEBUG [detached HEAD 0df71be93] merge master -Dorg -Ssuccess-only
2024-10-18 06:52:22,748 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-18 06:52:22,748 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-18 06:52:22,791 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-10-18 06:52:23,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:52:23,057 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-10-18 06:52:23,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:52:23,452 [ scc.config] DEBUG Found submodule.omero-py.url
2024-10-18 06:52:23,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:52:23,832 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-10-18 06:52:24,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:52:24,220 [ scc.config] DEBUG Found submodule.omero-web.url
2024-10-18 06:52:24,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-18 06:52:24,596 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-18 06:52:24,621 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f48517ea8b0> has local changes
2024-10-18 06:52:24,622 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
- PR 588 effigies 'rf(py314): Replace deprecated pkgutil.find_loader'
Generated by OMERO-python-superbuild-push#205 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/205/)'
2024-10-18 06:52:24,631 [ scc.git] DEBUG [detached HEAD 2186367] merge master -Dorg -Ssuccess-only
2024-10-18 06:52:24,631 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-18 06:52:24,632 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-10-18 06:52:24,632 [ scc.merge] INFO Already up to date.
2024-10-18 06:52:24,632 [ scc.merge] INFO
2024-10-18 06:52:24,632 [ scc.merge] INFO Merged PRs:
2024-10-18 06:52:24,632 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-18 06:52:24,632 [ scc.merge] INFO
2024-10-18 06:52:24,632 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-10-18 06:52:24,632 [ scc.merge] INFO Already up to date.
2024-10-18 06:52:24,632 [ scc.merge] INFO
2024-10-18 06:52:24,632 [ scc.merge] INFO Merged PRs:
2024-10-18 06:52:24,632 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-18 06:52:24,632 [ scc.merge] INFO
2024-10-18 06:52:24,632 [ scc.merge] INFO Repository: ome/omero-marshal
2024-10-18 06:52:24,632 [ scc.merge] INFO Excluded PRs:
2024-10-18 06:52:24,632 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-10-18 06:52:24,632 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-10-18 06:52:24,632 [ scc.merge] INFO Already up to date.
2024-10-18 06:52:24,632 [ scc.merge] INFO
2024-10-18 06:52:24,632 [ scc.merge] INFO Merged PRs:
2024-10-18 06:52:24,632 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-18 06:52:24,632 [ scc.merge] INFO
2024-10-18 06:52:24,632 [ scc.merge] INFO Repository: ome/omero-py
2024-10-18 06:52:24,632 [ scc.merge] INFO Excluded PRs:
2024-10-18 06:52:24,632 [ scc.merge] INFO - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
2024-10-18 06:52:24,632 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-10-18 06:52:24,632 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-10-18 06:52:24,632 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-10-18 06:52:24,632 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-10-18 06:52:24,632 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-10-18 06:52:24,632 [ scc.merge] INFO Already up to date.
2024-10-18 06:52:24,633 [ scc.merge] INFO
2024-10-18 06:52:24,633 [ scc.merge] INFO Merged PRs:
2024-10-18 06:52:24,633 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-10-18 06:52:24,633 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-18 06:52:24,633 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-18 06:52:24,633 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-18 06:52:24,633 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-10-18 06:52:24,633 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-18 06:52:24,633 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-10-18 06:52:24,633 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-10-18 06:52:24,633 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation'
2024-10-18 06:52:24,633 [ scc.merge] INFO - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-18 06:52:24,633 [ scc.merge] INFO
2024-10-18 06:52:24,633 [ scc.merge] INFO Repository: ome/omero-scripts
2024-10-18 06:52:24,633 [ scc.merge] INFO Excluded PRs:
2024-10-18 06:52:24,633 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-10-18 06:52:24,633 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-10-18 06:52:24,633 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-10-18 06:52:24,633 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-10-18 06:52:24,633 [ scc.merge] INFO Already up to date.
2024-10-18 06:52:24,633 [ scc.merge] INFO
2024-10-18 06:52:24,633 [ scc.merge] INFO Merged PRs:
2024-10-18 06:52:24,633 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-18 06:52:24,633 [ scc.merge] INFO
2024-10-18 06:52:24,633 [ scc.merge] INFO Conflicting PRs (not included):
2024-10-18 06:52:24,633 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-18 06:52:24,633 [ scc.merge] INFO
2024-10-18 06:52:24,633 [ scc.merge] INFO Repository: ome/omero-web
2024-10-18 06:52:24,633 [ scc.merge] INFO Excluded PRs:
2024-10-18 06:52:24,633 [ scc.merge] INFO - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-10-18 06:52:24,633 [ scc.merge] INFO - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
2024-10-18 06:52:24,633 [ scc.merge] INFO - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
2024-10-18 06:52:24,633 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-10-18 06:52:24,633 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-10-18 06:52:24,633 [ scc.merge] INFO Already up to date.
2024-10-18 06:52:24,633 [ scc.merge] INFO
2024-10-18 06:52:24,633 [ scc.merge] INFO Merged PRs:
2024-10-18 06:52:24,633 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-18 06:52:24,634 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-18 06:52:24,634 [ scc.merge] INFO - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-18 06:52:24,634 [ scc.merge] INFO - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-18 06:52:24,634 [ scc.merge] INFO - PR 588 effigies 'rf(py314): Replace deprecated pkgutil.find_loader'
2024-10-18 06:52:24,634 [ scc.merge] INFO
2024-10-18 06:52:24,634 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-18 06:52:24,634 [ scc.git] DEBUG Calling 'git remote'
2024-10-18 06:52:24,638 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-18 06:52:24,638 [ scc.git] DEBUG Calling 'git remote'
2024-10-18 06:52:24,642 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-18 06:52:24,642 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-18 06:52:24,642 [ scc.git] DEBUG Calling 'git remote'
2024-10-18 06:52:24,646 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-18 06:52:24,646 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-18 06:52:24,646 [ scc.git] DEBUG Calling 'git remote'
2024-10-18 06:52:24,649 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-18 06:52:24,649 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-18 06:52:24,649 [ scc.git] DEBUG Calling 'git remote'
2024-10-18 06:52:24,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-18 06:52:24,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-18 06:52:24,653 [ scc.git] DEBUG Calling 'git remote'
2024-10-18 06:52:24,657 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 4fd72efa
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from da5b7d11f
nothing to commit, working tree clean
HEAD detached from e849d72
nothing to commit, working tree clean
2024-10-18 06:52:52,334 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
![[Jenkins]](/jenkins/static/d8ca237c/images/svgs/logo.svg){kind=logo}
