Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-10-21 00:35:31,426 [ scc.config] DEBUG Found github.token
2024-10-21 00:35:31,428 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-21 00:35:31,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:35:31,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:35:32,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-21 00:35:32,379 [ scc.gh] DEBUG 4757 remaining from 5000 (Reset at 01:10
2024-10-21 00:35:32,380 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-21 00:35:32,386 [ scc.git] DEBUG Check current status
2024-10-21 00:35:32,386 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-21 00:35:32,390 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-21 00:35:32,390 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-21 00:35:32,431 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-21 00:35:32,434 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-21 00:35:32,437 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-21 00:35:32,441 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-21 00:35:32,445 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-21 00:35:32,449 [ scc.config] DEBUG Found remote.origin.url
2024-10-21 00:35:32,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-21 00:35:33,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-21 00:35:33,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-21 00:35:34,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-21 00:35:34,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-21 00:35:34,530 [ scc.git] DEBUG Resetting...
2024-10-21 00:35:34,530 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-21 00:35:34,537 [ scc.git] DEBUG HEAD is now at e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-21 00:35:34,537 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-21 00:35:34,590 [ scc.git] DEBUG Check current status
2024-10-21 00:35:34,590 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-21 00:35:34,594 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-21 00:35:34,595 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-21 00:35:34,634 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-21 00:35:34,637 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-21 00:35:34,641 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-21 00:35:34,645 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-21 00:35:34,648 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-21 00:35:34,649 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-21 00:35:34,649 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-21 00:35:34,649 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-21 00:35:34,649 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-21 00:35:34,649 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-21 00:35:34,649 [ scc.repo] DEBUG ## PRs found:
2024-10-21 00:35:35,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-21 00:35:35,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-21 00:35:35,457 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-21 00:35:35,457 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-21 00:35:35,458 [ scc.repo] DEBUG ## Branches found:
2024-10-21 00:35:35,458 [ scc.git] DEBUG Get sha1 of %s
2024-10-21 00:35:35,458 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:35:35,462 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-21 00:35:35,466 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-21 00:35:35,466 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-21 00:35:35,470 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-21 00:35:35,474 [ scc.git] DEBUG Already up to date.
2024-10-21 00:35:35,474 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-21 00:35:35,773 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-21 00:35:35,773 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-21 00:35:35,778 [ scc.git] DEBUG ## Unique users: []
2024-10-21 00:35:35,779 [ scc.git] DEBUG Get sha1 of %s
2024-10-21 00:35:35,779 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:35:35,784 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-21 00:35:35,790 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:35:35,793 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-21 00:35:35,802 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-21 00:35:35,804 [ scc.git] DEBUG omero-py | 2 +-
2024-10-21 00:35:35,804 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-10-21 00:35:35,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:35:35,939 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-21 00:35:36,139 [ scc.git] DEBUG Submodule path 'omero-py': checked out '4fd72efaa8cdbec9da98e1d28678af16878a86ba'
2024-10-21 00:35:36,140 [ scc.git] DEBUG Get sha1 of %s
2024-10-21 00:35:36,140 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:35:36,144 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-21 00:35:36,468 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f87ac74bfd0> has no local changes
2024-10-21 00:35:36,469 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Generated by OMERO-python-superbuild-push#208 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/208/)'
2024-10-21 00:35:36,497 [ scc.git] DEBUG [detached HEAD 6452935] merge master -Dorg -Snone
2024-10-21 00:35:36,497 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-21 00:35:36,497 [ scc.merge] INFO Already up to date.
2024-10-21 00:35:36,497 [ scc.merge] INFO
2024-10-21 00:35:36,497 [ scc.merge] INFO Merged PRs:
2024-10-21 00:35:36,497 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-21 00:35:36,498 [ scc.merge] INFO
2024-10-21 00:35:36,498 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-21 00:35:36,498 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-21 00:35:39,087 [ scc.config] DEBUG Found github.token
2024-10-21 00:35:39,090 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-21 00:35:39,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:35:39,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:35:40,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-21 00:35:40,016 [ scc.gh] DEBUG 4747 remaining from 5000 (Reset at 01:10
2024-10-21 00:35:40,017 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-21 00:35:40,021 [ scc.git] DEBUG Check current status
2024-10-21 00:35:40,022 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-21 00:35:40,025 [ scc.git] DEBUG 6452935 merge master -Dorg -Snone
2024-10-21 00:35:40,025 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-21 00:35:40,066 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-21 00:35:40,070 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-21 00:35:40,073 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-21 00:35:40,077 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-21 00:35:40,080 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-21 00:35:40,085 [ scc.config] DEBUG Found remote.origin.url
2024-10-21 00:35:40,085 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-10-21 00:35:40,087 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-21 00:35:40,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-21 00:35:40,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-21 00:35:41,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-21 00:35:41,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-21 00:35:42,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-21 00:35:42,165 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-21 00:35:42,213 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-21 00:35:42,213 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-21 00:35:42,218 [ scc.git] DEBUG Check current status
2024-10-21 00:35:42,218 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-21 00:35:42,222 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-10-21 00:35:42,222 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-21 00:35:42,266 [ scc.config] DEBUG Found remote.origin.url
2024-10-21 00:35:42,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-10-21 00:35:43,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-21 00:35:43,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-21 00:35:43,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-21 00:35:44,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-21 00:35:44,291 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-21 00:35:44,332 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-21 00:35:44,333 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-21 00:35:44,333 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-21 00:35:44,337 [ scc.git] DEBUG Check current status
2024-10-21 00:35:44,337 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-21 00:35:44,342 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-10-21 00:35:44,342 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-21 00:35:44,385 [ scc.config] DEBUG Found remote.origin.url
2024-10-21 00:35:44,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-10-21 00:35:45,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-21 00:35:45,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-21 00:35:46,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-21 00:35:46,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-21 00:35:46,429 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-21 00:35:46,473 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-21 00:35:46,474 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-21 00:35:46,474 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-21 00:35:46,478 [ scc.git] DEBUG Check current status
2024-10-21 00:35:46,478 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-21 00:35:46,550 [ scc.git] DEBUG 4fd72efa Bump version: 5.19.5 → 5.19.6.dev0
2024-10-21 00:35:46,550 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-21 00:35:46,592 [ scc.config] DEBUG Found remote.origin.url
2024-10-21 00:35:46,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-10-21 00:35:47,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-21 00:35:47,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-21 00:35:48,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-21 00:35:48,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-21 00:35:48,550 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-21 00:35:48,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-21 00:35:48,606 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-21 00:35:48,606 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-21 00:35:48,612 [ scc.git] DEBUG Check current status
2024-10-21 00:35:48,613 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-21 00:35:48,683 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-21 00:35:48,683 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-21 00:35:48,741 [ scc.config] DEBUG Found remote.origin.url
2024-10-21 00:35:48,741 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-10-21 00:35:49,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-10-21 00:35:49,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-21 00:35:49,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-21 00:35:50,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-21 00:35:50,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-21 00:35:50,714 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-21 00:35:50,752 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-21 00:35:50,753 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-21 00:35:50,753 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-21 00:35:50,757 [ scc.git] DEBUG Check current status
2024-10-21 00:35:50,757 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-21 00:35:50,828 [ scc.git] DEBUG da5b7d11f Bump version: 5.27.2 → 5.27.3.dev0
2024-10-21 00:35:50,829 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-21 00:35:50,872 [ scc.config] DEBUG Found remote.origin.url
2024-10-21 00:35:51,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-10-21 00:35:51,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-21 00:35:52,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-21 00:35:52,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-21 00:35:52,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-21 00:35:52,905 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-21 00:35:52,945 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-21 00:35:52,945 [ scc.git] DEBUG Resetting...
2024-10-21 00:35:52,945 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-21 00:35:52,951 [ scc.git] DEBUG HEAD is now at 6452935 merge master -Dorg -Snone
2024-10-21 00:35:52,951 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-21 00:35:53,006 [ scc.git] DEBUG Check current status
2024-10-21 00:35:53,006 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-21 00:35:53,011 [ scc.git] DEBUG 6452935 merge master -Dorg -Snone
2024-10-21 00:35:53,011 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-21 00:35:53,050 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-21 00:35:53,053 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-21 00:35:53,056 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-21 00:35:53,060 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-21 00:35:53,063 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-21 00:35:53,064 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-21 00:35:53,064 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-21 00:35:53,064 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-21 00:35:53,064 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-21 00:35:53,064 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-21 00:35:53,064 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-10-21 00:35:53,064 [ scc.repo] DEBUG ## PRs found:
2024-10-21 00:35:53,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-21 00:35:53,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-21 00:35:53,838 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-21 00:35:54,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-21 00:35:54,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-21 00:35:55,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-21 00:35:55,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/9660559833988d271074de56e54f2462a7be74e9?per_page=1 HTTP/1.1" 200 2
2024-10-21 00:35:55,853 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-21 00:35:55,853 [ scc.repo] DEBUG ## Branches found:
2024-10-21 00:35:55,853 [ scc.git] DEBUG Get sha1 of %s
2024-10-21 00:35:55,853 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:35:55,861 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-21 00:35:55,866 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-21 00:35:55,866 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-21 00:35:55,873 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-21 00:35:55,880 [ scc.git] DEBUG Already up to date.
2024-10-21 00:35:55,880 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-21 00:35:56,218 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-21 00:35:56,218 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-21 00:35:56,230 [ scc.git] DEBUG ## Unique users: []
2024-10-21 00:35:56,230 [ scc.git] DEBUG Get sha1 of %s
2024-10-21 00:35:56,230 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:35:56,234 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-21 00:35:56,240 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:35:56,244 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-21 00:35:56,249 [ scc.git] DEBUG Already up to date.
2024-10-21 00:35:56,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:35:56,410 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-21 00:35:56,454 [ scc.git] DEBUG Get sha1 of %s
2024-10-21 00:35:56,454 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:35:56,459 [ scc.repo] DEBUG ## PRs found:
2024-10-21 00:35:56,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-10-21 00:35:57,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-10-21 00:35:57,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-10-21 00:35:58,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-21 00:35:58,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-21 00:35:59,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-21 00:35:59,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-10-21 00:35:59,966 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-21 00:35:59,966 [ scc.repo] DEBUG ## Branches found:
2024-10-21 00:35:59,966 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-21 00:35:59,966 [ scc.git] DEBUG Get sha1 of %s
2024-10-21 00:35:59,966 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:35:59,971 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-21 00:35:59,975 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-21 00:35:59,976 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-21 00:35:59,980 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-21 00:35:59,985 [ scc.git] DEBUG Already up to date.
2024-10-21 00:35:59,985 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-10-21 00:36:00,291 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-10-21 00:36:00,292 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-10-21 00:36:00,297 [ scc.git] DEBUG ## Unique users: []
2024-10-21 00:36:00,297 [ scc.git] DEBUG Get sha1 of %s
2024-10-21 00:36:00,297 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:36:00,302 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-21 00:36:00,307 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:36:00,311 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-21 00:36:00,640 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-10-21 00:36:00,640 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-10-21 00:36:00,640 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-10-21 00:36:00,641 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-10-21 00:36:00,641 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-10-21 00:36:00,641 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-10-21 00:36:00,641 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-10-21 00:36:00,641 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-10-21 00:36:00,641 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-10-21 00:36:00,642 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-21 00:36:00,646 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-10-21 00:36:00,646 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-10-21 00:36:00,646 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-10-21 00:36:00,646 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-10-21 00:36:00,646 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-10-21 00:36:00,646 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-10-21 00:36:00,646 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-10-21 00:36:00,646 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-10-21 00:36:00,646 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-10-21 00:36:00,646 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-10-21 00:36:00,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:36:00,771 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-21 00:36:00,813 [ scc.git] DEBUG Get sha1 of %s
2024-10-21 00:36:00,813 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:36:00,818 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-21 00:36:00,863 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-21 00:36:00,869 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd10920f790> has no local changes
2024-10-21 00:36:00,869 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#208 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/208/)'
2024-10-21 00:36:00,878 [ scc.git] DEBUG [detached HEAD 38f8550] merge master -Dorg -Ssuccess-only
2024-10-21 00:36:00,879 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-21 00:36:00,879 [ scc.repo] DEBUG ## PRs found:
2024-10-21 00:36:01,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-10-21 00:36:01,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-10-21 00:36:02,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-10-21 00:36:02,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-21 00:36:03,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-21 00:36:03,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-21 00:36:03,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-10-21 00:36:03,934 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-21 00:36:04,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-10-21 00:36:04,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-10-21 00:36:05,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-10-21 00:36:05,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-10-21 00:36:05,732 [ scc.repo] DEBUG ## Branches found:
2024-10-21 00:36:05,732 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-21 00:36:05,732 [ scc.git] DEBUG Get sha1 of %s
2024-10-21 00:36:05,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:36:05,737 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-21 00:36:05,741 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-21 00:36:05,741 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-21 00:36:05,745 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-21 00:36:05,750 [ scc.git] DEBUG Already up to date.
2024-10-21 00:36:05,751 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-10-21 00:36:06,160 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-10-21 00:36:06,160 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-10-21 00:36:06,166 [ scc.git] DEBUG ## Unique users: []
2024-10-21 00:36:06,166 [ scc.git] DEBUG Get sha1 of %s
2024-10-21 00:36:06,166 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:36:06,170 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-21 00:36:06,175 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:36:06,179 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-21 00:36:06,190 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-10-21 00:36:06,190 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-21 00:36:06,193 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-10-21 00:36:06,193 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-10-21 00:36:06,193 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-10-21 00:36:06,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:36:06,340 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-21 00:36:06,382 [ scc.git] DEBUG Get sha1 of %s
2024-10-21 00:36:06,382 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:36:06,386 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-21 00:36:06,426 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-21 00:36:06,433 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd109256730> has no local changes
2024-10-21 00:36:06,433 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#208 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/208/)'
2024-10-21 00:36:06,442 [ scc.git] DEBUG [detached HEAD adfcb2b] merge master -Dorg -Ssuccess-only
2024-10-21 00:36:06,443 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-21 00:36:06,443 [ scc.repo] DEBUG ## PRs found:
2024-10-21 00:36:07,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-10-21 00:36:07,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/431 HTTP/1.1" 200 None
2024-10-21 00:36:08,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-21 00:36:08,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-21 00:36:08,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-21 00:36:09,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-21 00:36:09,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0e500ec05bf9227b66b28a480b40e0936241d953?per_page=1 HTTP/1.1" 200 None
2024-10-21 00:36:10,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-21 00:36:10,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/status HTTP/1.1" 200 None
2024-10-21 00:36:10,768 [ scc.repo] DEBUG - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-21 00:36:11,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None
2024-10-21 00:36:11,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None
2024-10-21 00:36:12,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None
2024-10-21 00:36:12,243 [ scc.repo] DEBUG # ... Include label: include
2024-10-21 00:36:12,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-21 00:36:13,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-21 00:36:13,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-21 00:36:14,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-21 00:36:14,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1?per_page=1 HTTP/1.1" 200 None
2024-10-21 00:36:15,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-21 00:36:15,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/status HTTP/1.1" 200 None
2024-10-21 00:36:15,566 [ scc.repo] DEBUG - PR 427 Rdornier 'Add fileset folder creation'
2024-10-21 00:36:16,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-10-21 00:36:16,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-10-21 00:36:17,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-21 00:36:17,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-21 00:36:17,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-21 00:36:18,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-21 00:36:18,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-10-21 00:36:19,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-21 00:36:19,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-10-21 00:36:19,756 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-10-21 00:36:20,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-10-21 00:36:20,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-10-21 00:36:21,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-10-21 00:36:21,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-21 00:36:22,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-21 00:36:22,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-10-21 00:36:22,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-21 00:36:23,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-21 00:36:23,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-21 00:36:24,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-21 00:36:24,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-10-21 00:36:25,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-21 00:36:25,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-10-21 00:36:25,739 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-10-21 00:36:26,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-10-21 00:36:26,169 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-10-21 00:36:26,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-10-21 00:36:27,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-10-21 00:36:27,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-21 00:36:28,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-21 00:36:28,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-21 00:36:28,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-10-21 00:36:28,847 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-21 00:36:29,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-10-21 00:36:29,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-10-21 00:36:30,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-21 00:36:30,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-21 00:36:31,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-21 00:36:31,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-21 00:36:32,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-10-21 00:36:32,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-21 00:36:33,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-10-21 00:36:33,065 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-10-21 00:36:33,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-10-21 00:36:33,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-10-21 00:36:34,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-10-21 00:36:34,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-10-21 00:36:35,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-21 00:36:35,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-21 00:36:36,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-21 00:36:36,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-10-21 00:36:36,718 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-21 00:36:37,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-10-21 00:36:37,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-21 00:36:38,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-21 00:36:38,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-21 00:36:38,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-10-21 00:36:38,988 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-21 00:36:39,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-10-21 00:36:39,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-10-21 00:36:40,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-21 00:36:40,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-21 00:36:41,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-21 00:36:41,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-10-21 00:36:41,818 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-21 00:36:42,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-10-21 00:36:42,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-10-21 00:36:43,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-21 00:36:43,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-21 00:36:44,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-21 00:36:44,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-10-21 00:36:44,576 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-10-21 00:36:45,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-10-21 00:36:45,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-10-21 00:36:45,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-10-21 00:36:46,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-10-21 00:36:46,381 [ scc.repo] DEBUG ## Branches found:
2024-10-21 00:36:46,381 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-21 00:36:46,382 [ scc.git] DEBUG Get sha1 of %s
2024-10-21 00:36:46,382 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:36:46,388 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-21 00:36:46,393 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-21 00:36:46,393 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-21 00:36:46,398 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-21 00:36:46,404 [ scc.git] DEBUG Already up to date.
2024-10-21 00:36:46,404 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-10-21 00:36:47,766 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-21 00:36:47,766 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-10-21 00:36:47,771 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-10-21 00:36:48,100 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-21 00:36:48,101 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-10-21 00:36:48,106 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-10-21 00:36:48,404 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-21 00:36:48,404 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-10-21 00:36:48,410 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-10-21 00:36:48,719 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-21 00:36:48,719 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-10-21 00:36:48,725 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-10-21 00:36:49,078 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-21 00:36:49,078 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-10-21 00:36:49,083 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-10-21 00:36:49,360 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-21 00:36:49,361 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-10-21 00:36:49,366 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-10-21 00:36:49,649 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-21 00:36:49,649 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-10-21 00:36:49,655 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-10-21 00:36:50,257 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-21 00:36:50,257 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-10-21 00:36:50,262 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head'
2024-10-21 00:36:50,861 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-21 00:36:50,861 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD
2024-10-21 00:36:50,866 [ scc.git] DEBUG Calling 'git fetch origin pull/431/head'
2024-10-21 00:36:51,220 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-21 00:36:51,221 [ scc.git] DEBUG * branch refs/pull/431/head -> FETCH_HEAD
2024-10-21 00:36:51,228 [ scc.git] DEBUG ## Unique users: []
2024-10-21 00:36:51,228 [ scc.git] DEBUG Get sha1 of %s
2024-10-21 00:36:51,228 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:36:51,234 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-21 00:36:51,247 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:36:51,253 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-21 00:36:51,406 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-10-21 00:36:51,407 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-10-21 00:36:51,408 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-21 00:36:51,413 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-10-21 00:36:51,413 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-10-21 00:36:51,413 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-10-21 00:36:51,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:36:51,542 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-21 00:36:51,554 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:36:51,559 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-21 00:36:51,895 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-21 00:36:51,895 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-10-21 00:36:51,896 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-21 00:36:51,904 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-10-21 00:36:51,904 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-10-21 00:36:51,904 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-10-21 00:36:52,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:36:52,052 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-21 00:36:52,064 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:36:52,070 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-21 00:36:52,111 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-10-21 00:36:52,112 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-21 00:36:52,116 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-10-21 00:36:52,116 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-10-21 00:36:52,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:36:52,444 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-21 00:36:52,457 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:36:52,463 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-21 00:36:52,703 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-10-21 00:36:52,703 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-10-21 00:36:52,705 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-21 00:36:52,709 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-10-21 00:36:52,709 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-10-21 00:36:52,709 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-10-21 00:36:52,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:36:52,847 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-21 00:36:52,860 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:36:52,866 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-21 00:36:52,941 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-21 00:36:52,944 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-10-21 00:36:52,944 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-10-21 00:36:52,944 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-10-21 00:36:52,944 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-10-21 00:36:52,944 [ scc.git] DEBUG create mode 100644 connect.py
2024-10-21 00:36:53,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:36:53,240 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-21 00:36:53,258 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:36:53,263 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-21 00:36:53,315 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-10-21 00:36:53,317 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-21 00:36:53,320 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-10-21 00:36:53,320 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-10-21 00:36:53,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:36:53,636 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-10-21 00:36:53,648 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:36:53,654 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-10-21 00:36:53,770 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-10-21 00:36:53,772 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-21 00:36:53,777 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-10-21 00:36:53,777 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-10-21 00:36:54,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:36:54,006 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-21 00:36:54,019 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:36:54,023 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-21 00:36:54,264 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-21 00:36:54,265 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-21 00:36:54,272 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-10-21 00:36:54,272 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-10-21 00:36:54,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:36:54,403 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-21 00:36:54,416 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:36:54,421 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-21 00:36:54,500 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-21 00:36:54,504 [ scc.git] DEBUG .gitignore | 1 +
2024-10-21 00:36:54,504 [ scc.git] DEBUG src/omero/plugins/download.py | 17 ++++++++++++-----
2024-10-21 00:36:54,504 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 5 deletions(-)
2024-10-21 00:36:54,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:36:54,801 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-21 00:36:54,814 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:36:54,820 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 431 (omero.HdfStorage.update: add size check on data.rowNumbers) 0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-21 00:36:54,896 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-21 00:36:54,900 [ scc.git] DEBUG src/omero/hdfstorageV2.py | 1 +
2024-10-21 00:36:54,900 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2024-10-21 00:36:55,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:36:55,188 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-21 00:36:55,226 [ scc.git] DEBUG Get sha1 of %s
2024-10-21 00:36:55,226 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:36:55,231 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-21 00:36:55,268 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-21 00:36:55,277 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd1081a0c70> has no local changes
2024-10-21 00:36:55,278 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Generated by OMERO-python-superbuild-push#208 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/208/)'
2024-10-21 00:36:55,287 [ scc.git] DEBUG [detached HEAD 6ac6a271] merge master -Dorg -Ssuccess-only
2024-10-21 00:36:55,288 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-21 00:36:55,288 [ scc.git] INFO Overriding base-branch from master to develop
2024-10-21 00:36:55,288 [ scc.repo] DEBUG ## PRs found:
2024-10-21 00:36:55,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-10-21 00:36:56,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-10-21 00:36:56,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2024-10-21 00:36:57,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-21 00:36:57,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-21 00:36:58,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-21 00:36:58,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-21 00:36:59,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-10-21 00:36:59,102 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-21 00:36:59,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-10-21 00:37:00,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-10-21 00:37:00,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-10-21 00:37:01,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-10-21 00:37:01,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-10-21 00:37:01,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-10-21 00:37:02,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-21 00:37:02,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-21 00:37:03,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-21 00:37:03,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-10-21 00:37:03,679 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-21 00:37:04,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-10-21 00:37:04,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-10-21 00:37:05,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-10-21 00:37:05,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-10-21 00:37:05,715 [ scc.repo] DEBUG ## Branches found:
2024-10-21 00:37:05,715 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-21 00:37:05,715 [ scc.git] DEBUG Get sha1 of %s
2024-10-21 00:37:05,715 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:37:05,720 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-10-21 00:37:05,725 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-21 00:37:05,725 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-10-21 00:37:05,730 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-10-21 00:37:05,737 [ scc.git] DEBUG Already up to date.
2024-10-21 00:37:05,737 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-10-21 00:37:06,392 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-21 00:37:06,392 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-10-21 00:37:06,398 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-10-21 00:37:06,929 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-21 00:37:06,930 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-10-21 00:37:06,935 [ scc.git] DEBUG ## Unique users: []
2024-10-21 00:37:06,935 [ scc.git] DEBUG Get sha1 of %s
2024-10-21 00:37:06,935 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:37:06,941 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-21 00:37:06,948 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:37:06,955 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-21 00:37:07,104 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-10-21 00:37:07,104 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-10-21 00:37:07,104 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-10-21 00:37:07,105 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-10-21 00:37:07,111 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-21 00:37:07,119 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-21 00:37:07,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:37:07,250 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-21 00:37:07,259 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-21 00:37:07,267 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#208](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/208/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/208/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-10-21 00:37:07,273 [ scc.config] DEBUG Found github.token
2024-10-21 00:37:07,274 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-10-21 00:37:07,274 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-21 00:37:07,280 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:37:07,286 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-21 00:37:07,308 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-21 00:37:07,312 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-10-21 00:37:07,312 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-10-21 00:37:07,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:37:07,641 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-21 00:37:07,712 [ scc.git] DEBUG Get sha1 of %s
2024-10-21 00:37:07,713 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:37:07,718 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-21 00:37:07,758 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-21 00:37:07,765 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd1081b3be0> has no local changes
2024-10-21 00:37:07,766 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#208 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/208/)'
2024-10-21 00:37:07,775 [ scc.git] DEBUG [detached HEAD b7d8ca6] merge master -Dorg -Ssuccess-only
2024-10-21 00:37:07,775 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-21 00:37:07,776 [ scc.repo] DEBUG ## PRs found:
2024-10-21 00:37:08,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-10-21 00:37:08,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/588 HTTP/1.1" 200 None
2024-10-21 00:37:09,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/588/comments HTTP/1.1" 200 None
2024-10-21 00:37:09,185 [ scc.repo] DEBUG # ... Include label: include
2024-10-21 00:37:09,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66 HTTP/1.1" 200 None
2024-10-21 00:37:10,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-21 00:37:10,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-21 00:37:11,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66 HTTP/1.1" 200 None
2024-10-21 00:37:11,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66?per_page=1 HTTP/1.1" 200 None
2024-10-21 00:37:11,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66 HTTP/1.1" 200 None
2024-10-21 00:37:12,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66/status HTTP/1.1" 200 None
2024-10-21 00:37:12,427 [ scc.repo] DEBUG - PR 588 effigies 'rf(py314): Replace deprecated pkgutil.find_loader'
2024-10-21 00:37:12,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/585 HTTP/1.1" 200 None
2024-10-21 00:37:13,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583 HTTP/1.1" 200 None
2024-10-21 00:37:13,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-21 00:37:14,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-21 00:37:14,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-21 00:37:15,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-21 00:37:15,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/aa50f469842b9687c74df8765d72241e6e37d32c?per_page=1 HTTP/1.1" 200 None
2024-10-21 00:37:16,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-21 00:37:16,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/status HTTP/1.1" 200 None
2024-10-21 00:37:16,618 [ scc.repo] DEBUG - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-21 00:37:17,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581 HTTP/1.1" 200 None
2024-10-21 00:37:17,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581/comments HTTP/1.1" 200 None
2024-10-21 00:37:17,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/580 HTTP/1.1" 200 None
2024-10-21 00:37:18,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-21 00:37:18,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-21 00:37:19,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-21 00:37:19,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-21 00:37:20,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc?per_page=1 HTTP/1.1" 200 None
2024-10-21 00:37:20,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-21 00:37:21,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/status HTTP/1.1" 200 None
2024-10-21 00:37:21,083 [ scc.repo] DEBUG - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-21 00:37:21,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568 HTTP/1.1" 200 None
2024-10-21 00:37:21,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568/comments HTTP/1.1" 200 None
2024-10-21 00:37:22,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-10-21 00:37:22,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-10-21 00:37:23,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-10-21 00:37:23,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-10-21 00:37:24,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-21 00:37:24,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-21 00:37:25,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-21 00:37:25,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-21 00:37:26,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-10-21 00:37:26,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-21 00:37:27,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-10-21 00:37:27,089 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-21 00:37:27,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-10-21 00:37:28,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-10-21 00:37:28,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-21 00:37:29,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-21 00:37:29,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-21 00:37:30,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-21 00:37:30,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-10-21 00:37:30,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-21 00:37:31,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-10-21 00:37:31,389 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-21 00:37:31,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-10-21 00:37:32,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-10-21 00:37:32,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-10-21 00:37:33,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-21 00:37:33,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-21 00:37:33,656 [ scc.repo] DEBUG ## Branches found:
2024-10-21 00:37:33,656 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-21 00:37:33,656 [ scc.git] DEBUG Get sha1 of %s
2024-10-21 00:37:33,656 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:37:33,663 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-21 00:37:33,668 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-21 00:37:33,668 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-21 00:37:33,759 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-21 00:37:33,767 [ scc.git] DEBUG Already up to date.
2024-10-21 00:37:33,767 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-10-21 00:37:35,269 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-21 00:37:35,269 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-10-21 00:37:35,277 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-10-21 00:37:35,592 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-21 00:37:35,593 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-10-21 00:37:35,598 [ scc.git] DEBUG Calling 'git fetch origin pull/580/head'
2024-10-21 00:37:36,136 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-21 00:37:36,136 [ scc.git] DEBUG * branch refs/pull/580/head -> FETCH_HEAD
2024-10-21 00:37:36,143 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head'
2024-10-21 00:37:36,506 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-21 00:37:36,506 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD
2024-10-21 00:37:36,511 [ scc.git] DEBUG Calling 'git fetch origin pull/588/head'
2024-10-21 00:37:36,928 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-21 00:37:36,929 [ scc.git] DEBUG * branch refs/pull/588/head -> FETCH_HEAD
2024-10-21 00:37:36,934 [ scc.git] DEBUG ## Unique users: []
2024-10-21 00:37:36,934 [ scc.git] DEBUG Get sha1 of %s
2024-10-21 00:37:36,935 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:37:36,941 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-21 00:37:36,949 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:37:36,955 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-21 00:37:37,135 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-10-21 00:37:37,135 [ scc.git] DEBUG Auto-merging setup.py
2024-10-21 00:37:37,138 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-21 00:37:37,142 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-10-21 00:37:37,142 [ scc.git] DEBUG setup.py | 1 +
2024-10-21 00:37:37,142 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-10-21 00:37:37,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:37:37,276 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-21 00:37:37,284 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:37:37,289 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-21 00:37:37,645 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-10-21 00:37:37,645 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-10-21 00:37:37,646 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-21 00:37:37,650 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-10-21 00:37:37,651 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-10-21 00:37:37,651 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-10-21 00:37:37,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:37:37,808 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-21 00:37:37,817 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:37:37,822 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 580 (omeroweb.webgateway.obj_id_bitmask: handle empty query results) 1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-21 00:37:37,975 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-21 00:37:37,980 [ scc.git] DEBUG omeroweb/webgateway/views.py | 6 ++++++
2024-10-21 00:37:37,980 [ scc.git] DEBUG 1 file changed, 6 insertions(+)
2024-10-21 00:37:38,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:37:38,179 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-21 00:37:38,189 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:37:38,194 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Allow users to click a group name to show data from all users in that group) aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-21 00:37:38,362 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-21 00:37:38,367 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_content.html | 6 +++++-
2024-10-21 00:37:38,367 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_dropdown2.html | 2 --
2024-10-21 00:37:38,367 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 3 deletions(-)
2024-10-21 00:37:38,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:37:38,567 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66'
2024-10-21 00:37:38,576 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:37:38,582 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 588 (rf(py314): Replace deprecated pkgutil.find_loader) 31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66'
2024-10-21 00:37:38,657 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-21 00:37:38,660 [ scc.git] DEBUG omeroweb/urls.py | 4 ++--
2024-10-21 00:37:38,661 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-)
2024-10-21 00:37:38,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:37:38,948 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-21 00:37:38,995 [ scc.git] DEBUG Get sha1 of %s
2024-10-21 00:37:38,995 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-21 00:37:39,001 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-21 00:37:39,045 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-21 00:37:39,057 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd108107fa0> has no local changes
2024-10-21 00:37:39,057 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
- PR 588 effigies 'rf(py314): Replace deprecated pkgutil.find_loader'
Generated by OMERO-python-superbuild-push#208 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/208/)'
2024-10-21 00:37:39,070 [ scc.git] DEBUG [detached HEAD 5a101d37c] merge master -Dorg -Ssuccess-only
2024-10-21 00:37:39,071 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-21 00:37:39,071 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-21 00:37:39,130 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-10-21 00:37:39,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:37:39,371 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-10-21 00:37:39,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:37:39,755 [ scc.config] DEBUG Found submodule.omero-py.url
2024-10-21 00:37:40,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:37:40,132 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-10-21 00:37:40,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:37:40,516 [ scc.config] DEBUG Found submodule.omero-web.url
2024-10-21 00:37:40,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-21 00:37:40,897 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-21 00:37:40,923 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd109738fd0> has local changes
2024-10-21 00:37:40,923 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
- PR 588 effigies 'rf(py314): Replace deprecated pkgutil.find_loader'
Generated by OMERO-python-superbuild-push#208 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/208/)'
2024-10-21 00:37:40,932 [ scc.git] DEBUG [detached HEAD 471fc97] merge master -Dorg -Ssuccess-only
2024-10-21 00:37:40,933 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-21 00:37:40,933 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-10-21 00:37:40,933 [ scc.merge] INFO Already up to date.
2024-10-21 00:37:40,933 [ scc.merge] INFO
2024-10-21 00:37:40,933 [ scc.merge] INFO Merged PRs:
2024-10-21 00:37:40,933 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-21 00:37:40,933 [ scc.merge] INFO
2024-10-21 00:37:40,933 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-10-21 00:37:40,933 [ scc.merge] INFO Already up to date.
2024-10-21 00:37:40,933 [ scc.merge] INFO
2024-10-21 00:37:40,933 [ scc.merge] INFO Merged PRs:
2024-10-21 00:37:40,933 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-21 00:37:40,933 [ scc.merge] INFO
2024-10-21 00:37:40,933 [ scc.merge] INFO Repository: ome/omero-marshal
2024-10-21 00:37:40,933 [ scc.merge] INFO Excluded PRs:
2024-10-21 00:37:40,933 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-10-21 00:37:40,933 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-10-21 00:37:40,933 [ scc.merge] INFO Already up to date.
2024-10-21 00:37:40,933 [ scc.merge] INFO
2024-10-21 00:37:40,933 [ scc.merge] INFO Merged PRs:
2024-10-21 00:37:40,933 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-21 00:37:40,934 [ scc.merge] INFO
2024-10-21 00:37:40,934 [ scc.merge] INFO Repository: ome/omero-py
2024-10-21 00:37:40,934 [ scc.merge] INFO Excluded PRs:
2024-10-21 00:37:40,934 [ scc.merge] INFO - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
2024-10-21 00:37:40,934 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-10-21 00:37:40,934 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-10-21 00:37:40,934 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-10-21 00:37:40,934 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-10-21 00:37:40,934 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-10-21 00:37:40,934 [ scc.merge] INFO Already up to date.
2024-10-21 00:37:40,934 [ scc.merge] INFO
2024-10-21 00:37:40,934 [ scc.merge] INFO Merged PRs:
2024-10-21 00:37:40,934 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-10-21 00:37:40,934 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-21 00:37:40,934 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-21 00:37:40,934 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-21 00:37:40,934 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-10-21 00:37:40,934 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-21 00:37:40,934 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-10-21 00:37:40,934 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-10-21 00:37:40,934 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation'
2024-10-21 00:37:40,934 [ scc.merge] INFO - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-21 00:37:40,934 [ scc.merge] INFO
2024-10-21 00:37:40,934 [ scc.merge] INFO Repository: ome/omero-scripts
2024-10-21 00:37:40,934 [ scc.merge] INFO Excluded PRs:
2024-10-21 00:37:40,934 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-10-21 00:37:40,934 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-10-21 00:37:40,934 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-10-21 00:37:40,935 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-10-21 00:37:40,935 [ scc.merge] INFO Already up to date.
2024-10-21 00:37:40,935 [ scc.merge] INFO
2024-10-21 00:37:40,935 [ scc.merge] INFO Merged PRs:
2024-10-21 00:37:40,935 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-21 00:37:40,935 [ scc.merge] INFO
2024-10-21 00:37:40,935 [ scc.merge] INFO Conflicting PRs (not included):
2024-10-21 00:37:40,935 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-21 00:37:40,935 [ scc.merge] INFO
2024-10-21 00:37:40,935 [ scc.merge] INFO Repository: ome/omero-web
2024-10-21 00:37:40,935 [ scc.merge] INFO Excluded PRs:
2024-10-21 00:37:40,935 [ scc.merge] INFO - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-10-21 00:37:40,935 [ scc.merge] INFO - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
2024-10-21 00:37:40,935 [ scc.merge] INFO - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
2024-10-21 00:37:40,935 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-10-21 00:37:40,935 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-10-21 00:37:40,935 [ scc.merge] INFO Already up to date.
2024-10-21 00:37:40,935 [ scc.merge] INFO
2024-10-21 00:37:40,935 [ scc.merge] INFO Merged PRs:
2024-10-21 00:37:40,935 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-21 00:37:40,935 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-21 00:37:40,935 [ scc.merge] INFO - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-21 00:37:40,935 [ scc.merge] INFO - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-21 00:37:40,935 [ scc.merge] INFO - PR 588 effigies 'rf(py314): Replace deprecated pkgutil.find_loader'
2024-10-21 00:37:40,935 [ scc.merge] INFO
2024-10-21 00:37:40,936 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-21 00:37:40,936 [ scc.git] DEBUG Calling 'git remote'
2024-10-21 00:37:40,941 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-21 00:37:40,941 [ scc.git] DEBUG Calling 'git remote'
2024-10-21 00:37:40,946 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-21 00:37:40,947 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-21 00:37:40,947 [ scc.git] DEBUG Calling 'git remote'
2024-10-21 00:37:40,951 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-21 00:37:40,951 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-21 00:37:40,951 [ scc.git] DEBUG Calling 'git remote'
2024-10-21 00:37:40,955 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-21 00:37:40,955 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-21 00:37:40,955 [ scc.git] DEBUG Calling 'git remote'
2024-10-21 00:37:40,958 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-21 00:37:40,959 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-21 00:37:40,959 [ scc.git] DEBUG Calling 'git remote'
2024-10-21 00:37:40,962 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 4fd72efa
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from da5b7d11f
nothing to commit, working tree clean
HEAD detached from e849d72
nothing to commit, working tree clean
2024-10-21 00:38:08,565 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
![[Jenkins]](/jenkins/static/f6f303f9/images/svgs/logo.svg){kind=logo}
