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Started by upstream project "Trigger" build number 257
originally caused by:
 Started by timer
[Pipeline] Start of Pipeline
[Pipeline] node
Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push
[Pipeline] {
[Pipeline] library
Loading library recursiveMerge@master
Attempting to resolve master from remote references...
 > git --version # timeout=10
 > git --version # 'git version 2.39.2'
 > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf
The recommended git tool is: NONE
No credentials specified
 > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git
 > git --version # timeout=10
 > git --version # 'git version 2.39.2'
 > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
Commit message: "Merge pull request #17 from jburel/python3"
 > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
[Pipeline] checkout
The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10
 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10
Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git
 > git --version # timeout=10
 > git --version # 'git version 2.43.5'
 > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision e849d7220735d67c4a474051cc03805d0a822cde (refs/remotes/origin/master)
Commit message: "Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1"
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
 > git config core.sparsecheckout # timeout=10
 > git checkout -f e849d7220735d67c4a474051cc03805d0a822cde # timeout=10
 > git rev-list --no-walk e849d7220735d67c4a474051cc03805d0a822cde # timeout=10
Cleaning workspace
 > git rev-parse --verify HEAD # timeout=10
Resetting working tree
 > git reset --hard # timeout=10
 > git clean -fdx # timeout=10
 > git submodule foreach --recursive git reset --hard # timeout=10
 > git submodule foreach --recursive git clean -fdx # timeout=10
 > git remote # timeout=10
 > git submodule init # timeout=10
 > git submodule sync # timeout=10
 > git config --get remote.origin.url # timeout=10
 > git submodule init # timeout=10
 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10
 > git config --get submodule.omero-py.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10
 > git config --get submodule.omero-web.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10
 > git config --get submodule.omero-marshal.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10
 > git config --get submodule.omero-dropbox.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10
 > git config --get submodule.omero-scripts.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10
 > git submodule update --init --recursive omero-py # timeout=10
 > git submodule update --init --recursive omero-web # timeout=10
 > git submodule update --init --recursive omero-marshal # timeout=10
 > git submodule update --init --recursive omero-dropbox # timeout=10
 > git submodule update --init --recursive omero-scripts # timeout=10
[Pipeline] pwd
[Pipeline] copyArtifacts
Copied 1 artifact from "OMERO-build-push" build number 222
[Pipeline] sh
+ pushd build
~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push
+ curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz
+ tar -zxf -
+ popd
~/workspace/OMERO-python-superbuild-push
+ python3 -m venv build/venv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ python3 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3)
Collecting pip
  Using cached pip-24.2-py3-none-any.whl (1.8 MB)
Installing collected packages: pip
  Attempting uninstall: pip
    Found existing installation: pip 21.2.3
    Uninstalling pip-21.2.3:
      Successfully uninstalled pip-21.2.3
Successfully installed pip-24.2
+ python3 -m pip install scc
Collecting scc
  Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
  Using cached PyGithub-2.4.0-py3-none-any.whl.metadata (3.9 kB)
Collecting PyYAML>=5.1 (from scc)
  Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
Collecting future (from scc)
  Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
  Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB)
Collecting ruamel.yaml.jinja2 (from scc)
  Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
  Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB)
Collecting urllib3<2 (from scc)
  Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
  Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
  Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
  Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
  Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB)
Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc)
  Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB)
Collecting Deprecated (from PyGithub>=1.54->scc)
  Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB)
Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc)
  Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
  Using cached cryptography-43.0.3-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB)
Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc)
  Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB)
Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (34 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached idna-3.10-py3-none-any.whl.metadata (10 kB)
Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB)
Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc)
  Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB)
Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc)
  Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes)
Using cached scc-0.20.0-py3-none-any.whl (48 kB)
Using cached PyGithub-2.4.0-py3-none-any.whl (362 kB)
Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB)
Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.16.0-py2.py3-none-any.whl (11 kB)
Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB)
Using cached requests-2.32.3-py3-none-any.whl (64 kB)
Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB)
Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB)
Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB)
Using cached certifi-2024.8.30-py3-none-any.whl (167 kB)
Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB)
Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (144 kB)
Using cached cryptography-43.0.3-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB)
Using cached idna-3.10-py3-none-any.whl (70 kB)
Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB)
Using cached pycparser-2.22-py3-none-any.whl (117 kB)
Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed Deprecated-1.2.14 PyGithub-2.4.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.4.0 cryptography-43.0.3 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-10-23 00:34:11,434 [  scc.config] DEBUG Found github.token
2024-10-23 00:34:11,437 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-23 00:34:11,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:34:11,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:34:12,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-23 00:34:12,364 [      scc.gh] DEBUG 4359 remaining from 5000 (Reset at 00:10
2024-10-23 00:34:12,364 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-23 00:34:12,368 [     scc.git] DEBUG Check current status
2024-10-23 00:34:12,368 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-23 00:34:12,372 [     scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-23 00:34:12,372 [     scc.git] DEBUG Calling 'git submodule status'
2024-10-23 00:34:12,413 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-23 00:34:12,416 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-23 00:34:12,419 [     scc.git] DEBUG  749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-23 00:34:12,423 [     scc.git] DEBUG  312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-23 00:34:12,426 [     scc.git] DEBUG  da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-23 00:34:12,430 [  scc.config] DEBUG Found remote.origin.url
2024-10-23 00:34:12,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-23 00:34:13,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-23 00:34:13,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-23 00:34:14,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-23 00:34:14,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-23 00:34:14,477 [     scc.git] DEBUG Resetting...
2024-10-23 00:34:14,477 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-23 00:34:14,483 [     scc.git] DEBUG HEAD is now at e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-23 00:34:14,483 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-23 00:34:14,532 [     scc.git] DEBUG Check current status
2024-10-23 00:34:14,532 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-23 00:34:14,536 [     scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-23 00:34:14,536 [     scc.git] DEBUG Calling 'git submodule status'
2024-10-23 00:34:14,573 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-23 00:34:14,576 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-23 00:34:14,579 [     scc.git] DEBUG  749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-23 00:34:14,583 [     scc.git] DEBUG  312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-23 00:34:14,586 [     scc.git] DEBUG  da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-23 00:34:14,587 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-10-23 00:34:14,587 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-10-23 00:34:14,587 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-10-23 00:34:14,587 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-10-23 00:34:14,587 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-10-23 00:34:14,587 [    scc.repo] DEBUG ## PRs found:
2024-10-23 00:34:14,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-23 00:34:15,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-23 00:34:15,451 [    scc.repo] DEBUG   # ... Include label: dependencies
2024-10-23 00:34:15,451 [    scc.repo] DEBUG   - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-23 00:34:15,451 [    scc.repo] DEBUG ## Branches found:
2024-10-23 00:34:15,451 [     scc.git] DEBUG Get sha1 of %s
2024-10-23 00:34:15,451 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:34:15,455 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-23 00:34:15,458 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-23 00:34:15,458 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-23 00:34:15,462 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-23 00:34:15,465 [     scc.git] DEBUG Already up to date.

2024-10-23 00:34:15,465 [     scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-23 00:34:15,781 [     scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-23 00:34:15,781 [     scc.git] DEBUG  * branch            refs/pull/293/head -> FETCH_HEAD
2024-10-23 00:34:15,785 [     scc.git] DEBUG ## Unique users: []
2024-10-23 00:34:15,785 [     scc.git] DEBUG Get sha1 of %s
2024-10-23 00:34:15,785 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:34:15,789 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-23 00:34:15,862 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:34:15,865 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-23 00:34:15,874 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-23 00:34:15,875 [     scc.git] DEBUG  omero-py | 2 +-
2024-10-23 00:34:15,876 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 1 deletion(-)
2024-10-23 00:34:16,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:34:16,050 [     scc.git] DEBUG Calling 'git submodule update'
2024-10-23 00:34:16,128 [     scc.git] DEBUG Submodule path 'omero-py': checked out '4fd72efaa8cdbec9da98e1d28678af16878a86ba'
2024-10-23 00:34:16,129 [     scc.git] DEBUG Get sha1 of %s
2024-10-23 00:34:16,129 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:34:16,132 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-10-23 00:34:16,478 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f876e2e18b0> has no local changes
2024-10-23 00:34:16,479 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-python-superbuild
Already up to date.

Merged PRs:
  - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'

Generated by OMERO-python-superbuild-push#210 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/210/)'
2024-10-23 00:34:16,502 [     scc.git] DEBUG [detached HEAD 0296fdf] merge master -Dorg -Snone
2024-10-23 00:34:16,503 [   scc.merge] INFO  Repository: ome/omero-python-superbuild
2024-10-23 00:34:16,503 [   scc.merge] INFO  Already up to date.
2024-10-23 00:34:16,503 [   scc.merge] INFO  
2024-10-23 00:34:16,503 [   scc.merge] INFO  Merged PRs:
2024-10-23 00:34:16,503 [   scc.merge] INFO    - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-23 00:34:16,503 [   scc.merge] INFO  
2024-10-23 00:34:16,503 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-23 00:34:16,503 [     scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master

submodules:
  omero-scripts:
    base-branch: develop
2024-10-23 00:34:18,542 [  scc.config] DEBUG Found github.token
2024-10-23 00:34:18,545 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-23 00:34:18,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:34:19,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:34:19,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-23 00:34:19,505 [      scc.gh] DEBUG 4349 remaining from 5000 (Reset at 00:10
2024-10-23 00:34:19,506 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-23 00:34:19,509 [     scc.git] DEBUG Check current status
2024-10-23 00:34:19,509 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-23 00:34:19,513 [     scc.git] DEBUG 0296fdf merge master -Dorg -Snone
2024-10-23 00:34:19,513 [     scc.git] DEBUG Calling 'git submodule status'
2024-10-23 00:34:19,548 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-23 00:34:19,551 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-23 00:34:19,554 [     scc.git] DEBUG  4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-23 00:34:19,558 [     scc.git] DEBUG  312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-23 00:34:19,561 [     scc.git] DEBUG  da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-23 00:34:19,565 [  scc.config] DEBUG Found remote.origin.url
2024-10-23 00:34:19,565 [     scc.git] DEBUG Reading repository configuration from repositories.yml
2024-10-23 00:34:19,567 [     scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
  omero-scripts:
    base-branch: develop

2024-10-23 00:34:19,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-23 00:34:20,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-23 00:34:20,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-23 00:34:21,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-23 00:34:21,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-23 00:34:21,596 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-23 00:34:21,638 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-23 00:34:21,638 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-23 00:34:21,642 [     scc.git] DEBUG Check current status
2024-10-23 00:34:21,642 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-23 00:34:21,646 [     scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-10-23 00:34:21,646 [     scc.git] DEBUG Calling 'git submodule status'
2024-10-23 00:34:21,686 [  scc.config] DEBUG Found remote.origin.url
2024-10-23 00:34:22,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-10-23 00:34:22,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-23 00:34:22,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-23 00:34:23,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-23 00:34:23,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-23 00:34:23,682 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-23 00:34:23,719 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-23 00:34:23,720 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-23 00:34:23,720 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-23 00:34:23,724 [     scc.git] DEBUG Check current status
2024-10-23 00:34:23,724 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-23 00:34:23,728 [     scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-10-23 00:34:23,728 [     scc.git] DEBUG Calling 'git submodule status'
2024-10-23 00:34:23,767 [  scc.config] DEBUG Found remote.origin.url
2024-10-23 00:34:24,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-10-23 00:34:24,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-23 00:34:24,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-23 00:34:25,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-23 00:34:25,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-23 00:34:25,751 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-23 00:34:25,789 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-23 00:34:25,790 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-23 00:34:25,790 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-23 00:34:25,794 [     scc.git] DEBUG Check current status
2024-10-23 00:34:25,794 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-23 00:34:25,798 [     scc.git] DEBUG 4fd72efa Bump version: 5.19.5 → 5.19.6.dev0
2024-10-23 00:34:25,798 [     scc.git] DEBUG Calling 'git submodule status'
2024-10-23 00:34:25,841 [  scc.config] DEBUG Found remote.origin.url
2024-10-23 00:34:26,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-10-23 00:34:26,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-23 00:34:27,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-23 00:34:27,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-23 00:34:27,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-23 00:34:27,857 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-23 00:34:27,894 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-23 00:34:27,895 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-23 00:34:27,895 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-23 00:34:27,899 [     scc.git] DEBUG Check current status
2024-10-23 00:34:27,899 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-23 00:34:27,902 [     scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-23 00:34:27,902 [     scc.git] DEBUG Calling 'git submodule status'
2024-10-23 00:34:27,940 [  scc.config] DEBUG Found remote.origin.url
2024-10-23 00:34:27,941 [     scc.git] DEBUG Repository configuration:
base-branch: develop

2024-10-23 00:34:28,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-10-23 00:34:28,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-23 00:34:29,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-23 00:34:29,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-23 00:34:29,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-23 00:34:29,989 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-23 00:34:30,027 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-23 00:34:30,027 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-23 00:34:30,027 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-23 00:34:30,031 [     scc.git] DEBUG Check current status
2024-10-23 00:34:30,032 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-23 00:34:30,036 [     scc.git] DEBUG da5b7d11f Bump version: 5.27.2 → 5.27.3.dev0
2024-10-23 00:34:30,036 [     scc.git] DEBUG Calling 'git submodule status'
2024-10-23 00:34:30,077 [  scc.config] DEBUG Found remote.origin.url
2024-10-23 00:34:30,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-10-23 00:34:30,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-23 00:34:31,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-23 00:34:31,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-23 00:34:32,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-23 00:34:32,104 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-23 00:34:32,141 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-23 00:34:32,141 [     scc.git] DEBUG Resetting...
2024-10-23 00:34:32,141 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-23 00:34:32,146 [     scc.git] DEBUG HEAD is now at 0296fdf merge master -Dorg -Snone
2024-10-23 00:34:32,147 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-23 00:34:32,195 [     scc.git] DEBUG Check current status
2024-10-23 00:34:32,196 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-23 00:34:32,201 [     scc.git] DEBUG 0296fdf merge master -Dorg -Snone
2024-10-23 00:34:32,201 [     scc.git] DEBUG Calling 'git submodule status'
2024-10-23 00:34:32,240 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-23 00:34:32,243 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-23 00:34:32,246 [     scc.git] DEBUG  4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-23 00:34:32,250 [     scc.git] DEBUG  312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-23 00:34:32,253 [     scc.git] DEBUG  da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-23 00:34:32,254 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-10-23 00:34:32,254 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-10-23 00:34:32,254 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-10-23 00:34:32,254 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-10-23 00:34:32,254 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-10-23 00:34:32,254 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2024-10-23 00:34:32,254 [    scc.repo] DEBUG ## PRs found:
2024-10-23 00:34:32,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-23 00:34:33,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-23 00:34:33,024 [    scc.repo] DEBUG   # ... Include label: dependencies
2024-10-23 00:34:33,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-23 00:34:34,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-23 00:34:34,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-23 00:34:34,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/9660559833988d271074de56e54f2462a7be74e9?per_page=1 HTTP/1.1" 200 2
2024-10-23 00:34:34,903 [    scc.repo] DEBUG   - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-23 00:34:34,903 [    scc.repo] DEBUG ## Branches found:
2024-10-23 00:34:34,903 [     scc.git] DEBUG Get sha1 of %s
2024-10-23 00:34:34,903 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:34:34,907 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-23 00:34:34,911 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-23 00:34:34,911 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-23 00:34:34,915 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-23 00:34:34,919 [     scc.git] DEBUG Already up to date.

2024-10-23 00:34:34,920 [     scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-23 00:34:35,222 [     scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-23 00:34:35,223 [     scc.git] DEBUG  * branch            refs/pull/293/head -> FETCH_HEAD
2024-10-23 00:34:35,227 [     scc.git] DEBUG ## Unique users: []
2024-10-23 00:34:35,227 [     scc.git] DEBUG Get sha1 of %s
2024-10-23 00:34:35,227 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:34:35,231 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-23 00:34:35,235 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:34:35,239 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-23 00:34:35,243 [     scc.git] DEBUG Already up to date.
2024-10-23 00:34:35,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:34:35,372 [     scc.git] DEBUG Calling 'git submodule update'
2024-10-23 00:34:35,411 [     scc.git] DEBUG Get sha1 of %s
2024-10-23 00:34:35,412 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:34:35,415 [    scc.repo] DEBUG ## PRs found:
2024-10-23 00:34:35,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-10-23 00:34:36,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-10-23 00:34:36,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-10-23 00:34:37,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-23 00:34:37,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-23 00:34:38,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-23 00:34:38,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-10-23 00:34:38,722 [    scc.repo] DEBUG   - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-23 00:34:38,722 [    scc.repo] DEBUG ## Branches found:
2024-10-23 00:34:38,722 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-23 00:34:38,722 [     scc.git] DEBUG Get sha1 of %s
2024-10-23 00:34:38,722 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:34:38,727 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-23 00:34:38,730 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-23 00:34:38,730 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-23 00:34:38,734 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-23 00:34:38,738 [     scc.git] DEBUG Already up to date.

2024-10-23 00:34:38,738 [     scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-10-23 00:34:39,093 [     scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-10-23 00:34:39,093 [     scc.git] DEBUG  * branch            refs/pull/16/head -> FETCH_HEAD
2024-10-23 00:34:39,098 [     scc.git] DEBUG ## Unique users: []
2024-10-23 00:34:39,098 [     scc.git] DEBUG Get sha1 of %s
2024-10-23 00:34:39,098 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:34:39,102 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-23 00:34:39,106 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:34:39,110 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-23 00:34:39,221 [     scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-10-23 00:34:39,221 [     scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-10-23 00:34:39,221 [     scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-10-23 00:34:39,221 [     scc.git] DEBUG Auto-merging src/fsLists.py
2024-10-23 00:34:39,221 [     scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-10-23 00:34:39,221 [     scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-10-23 00:34:39,221 [     scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-10-23 00:34:39,221 [     scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-10-23 00:34:39,221 [     scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-10-23 00:34:39,221 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-23 00:34:39,225 [     scc.git] DEBUG  src/fsAbstractPlatformMonitor.py |  6 +++---
2024-10-23 00:34:39,225 [     scc.git] DEBUG  src/fsDirectory.py               | 46 ++++++++++++++++++++--------------------
2024-10-23 00:34:39,225 [     scc.git] DEBUG  src/fsDropBox.py                 | 24 ++++++++++-----------
2024-10-23 00:34:39,225 [     scc.git] DEBUG  src/fsLists.py                   | 14 ++++++------
2024-10-23 00:34:39,225 [     scc.git] DEBUG  src/fsMac-10-5-Monitor.py        | 10 ++++-----
2024-10-23 00:34:39,225 [     scc.git] DEBUG  src/fsMonitor.py                 | 24 ++++++++++-----------
2024-10-23 00:34:39,225 [     scc.git] DEBUG  src/fsMonitorServer.py           | 10 ++++-----
2024-10-23 00:34:39,225 [     scc.git] DEBUG  src/fsPyinotifyMonitor.py        |  8 +++----
2024-10-23 00:34:39,225 [     scc.git] DEBUG  src/fsWin-XP-Monitor.py          | 20 ++++++++---------
2024-10-23 00:34:39,227 [     scc.git] DEBUG  9 files changed, 81 insertions(+), 81 deletions(-)
2024-10-23 00:34:39,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:34:39,382 [     scc.git] DEBUG Calling 'git submodule update'
2024-10-23 00:34:39,418 [     scc.git] DEBUG Get sha1 of %s
2024-10-23 00:34:39,418 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:34:39,422 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-23 00:34:39,457 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-10-23 00:34:39,462 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fe9f95219a0> has no local changes
2024-10-23 00:34:39,462 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-dropbox
Already up to date.

Merged PRs:
  - PR 16 joshmoore 'Review all instances of whitelist/blacklist'

Generated by OMERO-python-superbuild-push#210 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/210/)'
2024-10-23 00:34:39,470 [     scc.git] DEBUG [detached HEAD 934a5ef] merge master -Dorg -Ssuccess-only
2024-10-23 00:34:39,470 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-23 00:34:39,471 [    scc.repo] DEBUG ## PRs found:
2024-10-23 00:34:39,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-10-23 00:34:40,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-10-23 00:34:40,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-10-23 00:34:41,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-23 00:34:41,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-23 00:34:42,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-23 00:34:42,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-10-23 00:34:42,605 [    scc.repo] DEBUG   - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-23 00:34:43,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-10-23 00:34:43,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-10-23 00:34:43,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-10-23 00:34:44,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-10-23 00:34:44,398 [    scc.repo] DEBUG ## Branches found:
2024-10-23 00:34:44,398 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-23 00:34:44,398 [     scc.git] DEBUG Get sha1 of %s
2024-10-23 00:34:44,398 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:34:44,402 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-23 00:34:44,406 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-23 00:34:44,406 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-23 00:34:44,409 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-23 00:34:44,413 [     scc.git] DEBUG Already up to date.

2024-10-23 00:34:44,414 [     scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-10-23 00:34:44,941 [     scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-10-23 00:34:44,941 [     scc.git] DEBUG  * branch            refs/pull/69/head -> FETCH_HEAD
2024-10-23 00:34:44,945 [     scc.git] DEBUG ## Unique users: []
2024-10-23 00:34:44,945 [     scc.git] DEBUG Get sha1 of %s
2024-10-23 00:34:44,945 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:34:44,949 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-23 00:34:44,954 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:34:44,957 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-23 00:34:44,985 [     scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-10-23 00:34:44,986 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-23 00:34:44,988 [     scc.git] DEBUG  omero_marshal/encode/encoders/roi.py | 5 +++--
2024-10-23 00:34:44,988 [     scc.git] DEBUG  tests/unit/conftest.py               | 5 ++++-
2024-10-23 00:34:44,988 [     scc.git] DEBUG  2 files changed, 7 insertions(+), 3 deletions(-)
2024-10-23 00:34:45,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:34:45,145 [     scc.git] DEBUG Calling 'git submodule update'
2024-10-23 00:34:45,181 [     scc.git] DEBUG Get sha1 of %s
2024-10-23 00:34:45,182 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:34:45,186 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-23 00:34:45,222 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-10-23 00:34:45,228 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fe9f94ba820> has no local changes
2024-10-23 00:34:45,228 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-marshal
Excluded PRs:
  - PR 34 chris-allan 'Initial support for Event' (exclude comment)
  - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.

Merged PRs:
  - PR 69 will-moore 'Roi encoder allows Shape None'

Generated by OMERO-python-superbuild-push#210 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/210/)'
2024-10-23 00:34:45,235 [     scc.git] DEBUG [detached HEAD 2f94386] merge master -Dorg -Ssuccess-only
2024-10-23 00:34:45,235 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-23 00:34:45,236 [    scc.repo] DEBUG ## PRs found:
2024-10-23 00:34:45,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-10-23 00:34:46,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/431 HTTP/1.1" 200 None
2024-10-23 00:34:46,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-23 00:34:47,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-23 00:34:47,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-23 00:34:48,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-23 00:34:48,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0e500ec05bf9227b66b28a480b40e0936241d953?per_page=1 HTTP/1.1" 200 None
2024-10-23 00:34:49,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-23 00:34:49,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/status HTTP/1.1" 200 None
2024-10-23 00:34:49,532 [    scc.repo] DEBUG   - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-23 00:34:49,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None
2024-10-23 00:34:50,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None
2024-10-23 00:34:50,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None
2024-10-23 00:34:50,907 [    scc.repo] DEBUG   # ... Include label: include
2024-10-23 00:34:51,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-23 00:34:51,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-23 00:34:52,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-23 00:34:52,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-23 00:34:53,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1?per_page=1 HTTP/1.1" 200 None
2024-10-23 00:34:53,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-23 00:34:54,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/status HTTP/1.1" 200 None
2024-10-23 00:34:54,035 [    scc.repo] DEBUG   - PR 427 Rdornier 'Add fileset folder creation'
2024-10-23 00:34:54,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-10-23 00:34:54,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-10-23 00:34:55,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-23 00:34:55,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-23 00:34:56,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-23 00:34:56,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-23 00:34:57,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-10-23 00:34:57,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-23 00:34:58,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-10-23 00:34:58,116 [    scc.repo] DEBUG   - PR 408 jburel 'remove deprecated method'
2024-10-23 00:34:58,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-10-23 00:34:58,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-10-23 00:34:59,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-10-23 00:34:59,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-23 00:35:00,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-23 00:35:00,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-10-23 00:35:01,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-23 00:35:01,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-23 00:35:02,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-23 00:35:02,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-23 00:35:03,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-10-23 00:35:03,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-23 00:35:03,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-10-23 00:35:03,980 [    scc.repo] DEBUG   - PR 391 joshmoore 'Add jstack command'
2024-10-23 00:35:04,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-10-23 00:35:04,486 [    scc.repo] DEBUG   # ... Exclude label: exclude
2024-10-23 00:35:04,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-10-23 00:35:05,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-10-23 00:35:05,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-23 00:35:06,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-23 00:35:06,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-23 00:35:07,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-10-23 00:35:07,229 [    scc.repo] DEBUG   - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-23 00:35:07,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-10-23 00:35:08,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-10-23 00:35:08,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-23 00:35:09,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-23 00:35:09,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-23 00:35:10,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-23 00:35:10,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-10-23 00:35:10,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-23 00:35:11,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-10-23 00:35:11,247 [    scc.repo] DEBUG   - PR 332 jburel 'Build conda'
2024-10-23 00:35:11,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-10-23 00:35:12,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-10-23 00:35:12,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-10-23 00:35:13,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-10-23 00:35:13,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-23 00:35:14,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-23 00:35:14,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-23 00:35:14,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-10-23 00:35:14,845 [    scc.repo] DEBUG   - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-23 00:35:15,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-10-23 00:35:15,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-23 00:35:16,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-23 00:35:16,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-23 00:35:17,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-10-23 00:35:17,093 [    scc.repo] DEBUG   - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-23 00:35:17,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-10-23 00:35:18,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-10-23 00:35:18,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-23 00:35:19,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-23 00:35:19,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-23 00:35:20,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-10-23 00:35:20,126 [    scc.repo] DEBUG   - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-23 00:35:20,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-10-23 00:35:21,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-10-23 00:35:21,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-23 00:35:22,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-23 00:35:22,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-23 00:35:22,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-10-23 00:35:22,893 [    scc.repo] DEBUG   - PR 199 joshmoore 'user: allow setting default group'
2024-10-23 00:35:23,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-10-23 00:35:23,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-10-23 00:35:24,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-10-23 00:35:24,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-10-23 00:35:24,720 [    scc.repo] DEBUG ## Branches found:
2024-10-23 00:35:24,720 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-23 00:35:24,720 [     scc.git] DEBUG Get sha1 of %s
2024-10-23 00:35:24,720 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:35:24,724 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-23 00:35:24,728 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-23 00:35:24,728 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-23 00:35:24,732 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-23 00:35:24,736 [     scc.git] DEBUG Already up to date.

2024-10-23 00:35:24,736 [     scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-10-23 00:35:26,348 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-23 00:35:26,348 [     scc.git] DEBUG  * branch              refs/pull/199/head -> FETCH_HEAD
2024-10-23 00:35:26,352 [     scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-10-23 00:35:26,658 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-23 00:35:26,658 [     scc.git] DEBUG  * branch              refs/pull/207/head -> FETCH_HEAD
2024-10-23 00:35:26,662 [     scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-10-23 00:35:26,982 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-23 00:35:26,982 [     scc.git] DEBUG  * branch              refs/pull/266/head -> FETCH_HEAD
2024-10-23 00:35:26,987 [     scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-10-23 00:35:27,267 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-23 00:35:27,267 [     scc.git] DEBUG  * branch              refs/pull/299/head -> FETCH_HEAD
2024-10-23 00:35:27,271 [     scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-10-23 00:35:27,713 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-23 00:35:27,713 [     scc.git] DEBUG  * branch              refs/pull/332/head -> FETCH_HEAD
2024-10-23 00:35:27,717 [     scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-10-23 00:35:28,038 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-23 00:35:28,039 [     scc.git] DEBUG  * branch              refs/pull/337/head -> FETCH_HEAD
2024-10-23 00:35:28,043 [     scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-10-23 00:35:28,345 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-23 00:35:28,345 [     scc.git] DEBUG  * branch              refs/pull/391/head -> FETCH_HEAD
2024-10-23 00:35:28,349 [     scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-10-23 00:35:28,730 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-23 00:35:28,730 [     scc.git] DEBUG  * branch              refs/pull/408/head -> FETCH_HEAD
2024-10-23 00:35:28,735 [     scc.git] DEBUG Calling 'git fetch origin pull/427/head'
2024-10-23 00:35:29,212 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-23 00:35:29,212 [     scc.git] DEBUG  * branch              refs/pull/427/head -> FETCH_HEAD
2024-10-23 00:35:29,217 [     scc.git] DEBUG Calling 'git fetch origin pull/431/head'
2024-10-23 00:35:29,566 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-23 00:35:29,566 [     scc.git] DEBUG  * branch              refs/pull/431/head -> FETCH_HEAD
2024-10-23 00:35:29,571 [     scc.git] DEBUG ## Unique users: []
2024-10-23 00:35:29,571 [     scc.git] DEBUG Get sha1 of %s
2024-10-23 00:35:29,572 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:35:29,576 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-23 00:35:29,587 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:35:29,592 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-23 00:35:29,640 [     scc.git] DEBUG Auto-merging src/omero/cli.py
2024-10-23 00:35:29,641 [     scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-10-23 00:35:29,641 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-23 00:35:29,645 [     scc.git] DEBUG  src/omero/cli.py          |  6 ++++++
2024-10-23 00:35:29,645 [     scc.git] DEBUG  src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-10-23 00:35:29,646 [     scc.git] DEBUG  2 files changed, 39 insertions(+), 3 deletions(-)
2024-10-23 00:35:29,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:35:29,782 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-23 00:35:29,793 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:35:29,797 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-23 00:35:30,064 [     scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-23 00:35:30,064 [     scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-10-23 00:35:30,065 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-23 00:35:30,071 [     scc.git] DEBUG  src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-10-23 00:35:30,071 [     scc.git] DEBUG  test/unit/test_gateway.py     | 16 ++++++++++++++++
2024-10-23 00:35:30,071 [     scc.git] DEBUG  2 files changed, 29 insertions(+), 6 deletions(-)
2024-10-23 00:35:30,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:35:30,220 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-23 00:35:30,231 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:35:30,235 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-23 00:35:30,269 [     scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-10-23 00:35:30,269 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-23 00:35:30,272 [     scc.git] DEBUG  src/omero/plugins/search.py | 13 +++++++++----
2024-10-23 00:35:30,272 [     scc.git] DEBUG  1 file changed, 9 insertions(+), 4 deletions(-)
2024-10-23 00:35:30,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:35:30,601 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-23 00:35:30,612 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:35:30,616 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-23 00:35:30,950 [     scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-10-23 00:35:30,951 [     scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-10-23 00:35:30,951 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-23 00:35:30,954 [     scc.git] DEBUG  src/omero/plugins/obj.py      | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-10-23 00:35:30,954 [     scc.git] DEBUG  test/unit/clitest/test_obj.py |  2 +-
2024-10-23 00:35:30,955 [     scc.git] DEBUG  2 files changed, 69 insertions(+), 2 deletions(-)
2024-10-23 00:35:31,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:35:31,094 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-23 00:35:31,105 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:35:31,109 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-23 00:35:31,128 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-23 00:35:31,131 [     scc.git] DEBUG  .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-10-23 00:35:31,131 [     scc.git] DEBUG  connect.py                    | 11 +++++++++++
2024-10-23 00:35:31,131 [     scc.git] DEBUG  2 files changed, 48 insertions(+)
2024-10-23 00:35:31,131 [     scc.git] DEBUG  create mode 100644 .github/workflows/install.yml
2024-10-23 00:35:31,131 [     scc.git] DEBUG  create mode 100644 connect.py
2024-10-23 00:35:31,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:35:31,474 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-23 00:35:31,486 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:35:31,490 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-23 00:35:31,513 [     scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-10-23 00:35:31,514 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-23 00:35:31,517 [     scc.git] DEBUG  src/omero/plugins/import.py | 2 ++
2024-10-23 00:35:31,517 [     scc.git] DEBUG  1 file changed, 2 insertions(+)
2024-10-23 00:35:31,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:35:31,847 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-10-23 00:35:31,858 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:35:31,863 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-10-23 00:35:31,951 [     scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-10-23 00:35:31,952 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-23 00:35:31,956 [     scc.git] DEBUG  src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-10-23 00:35:31,956 [     scc.git] DEBUG  1 file changed, 59 insertions(+), 2 deletions(-)
2024-10-23 00:35:32,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:35:32,238 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-23 00:35:32,250 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:35:32,254 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-23 00:35:32,457 [     scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-23 00:35:32,458 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-23 00:35:32,465 [     scc.git] DEBUG  src/omero/gateway/__init__.py | 36 ------------------------------------
2024-10-23 00:35:32,465 [     scc.git] DEBUG  1 file changed, 36 deletions(-)
2024-10-23 00:35:32,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:35:32,625 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-23 00:35:32,636 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:35:32,640 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-23 00:35:32,739 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-23 00:35:32,742 [     scc.git] DEBUG  .gitignore                    |  1 +
2024-10-23 00:35:32,742 [     scc.git] DEBUG  src/omero/plugins/download.py | 17 ++++++++++++-----
2024-10-23 00:35:32,742 [     scc.git] DEBUG  2 files changed, 13 insertions(+), 5 deletions(-)
2024-10-23 00:35:33,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:35:33,007 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-23 00:35:33,018 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:35:33,022 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 431 (omero.HdfStorage.update: add size check on data.rowNumbers) 0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-23 00:35:33,041 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-23 00:35:33,044 [     scc.git] DEBUG  src/omero/hdfstorageV2.py | 1 +
2024-10-23 00:35:33,044 [     scc.git] DEBUG  1 file changed, 1 insertion(+)
2024-10-23 00:35:33,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:35:33,395 [     scc.git] DEBUG Calling 'git submodule update'
2024-10-23 00:35:33,435 [     scc.git] DEBUG Get sha1 of %s
2024-10-23 00:35:33,435 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:35:33,440 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-23 00:35:33,478 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-10-23 00:35:33,484 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fe9f8469c70> has no local changes
2024-10-23 00:35:33,484 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-py
Excluded PRs:
  - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
  - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
  - PR 387 will-moore 'Numpy pixels type' (label: exclude)
  - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
  - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
  - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.

Merged PRs:
  - PR 199 joshmoore 'user: allow setting default group'
  - PR 207 manics 'BlitzGateway.connect raise on error'
  - PR 266 joshmoore 'errors: use raise_error from cli plugins'
  - PR 299 joshmoore 'Add parents and children to omero obj'
  - PR 332 jburel 'Build conda'
  - PR 337 will-moore 'bulk.yml depth is passed to xargs'
  - PR 391 joshmoore 'Add jstack command'
  - PR 408 jburel 'remove deprecated method'
  - PR 427 Rdornier 'Add fileset folder creation'
  - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'

Generated by OMERO-python-superbuild-push#210 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/210/)'
2024-10-23 00:35:33,493 [     scc.git] DEBUG [detached HEAD b80005f0] merge master -Dorg -Ssuccess-only
2024-10-23 00:35:33,493 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-23 00:35:33,493 [     scc.git] INFO  Overriding base-branch from master to develop
2024-10-23 00:35:33,493 [    scc.repo] DEBUG ## PRs found:
2024-10-23 00:35:33,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-10-23 00:35:34,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-10-23 00:35:34,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2024-10-23 00:35:35,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-23 00:35:35,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-23 00:35:36,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-23 00:35:36,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-23 00:35:37,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-10-23 00:35:37,129 [    scc.repo] DEBUG   - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-23 00:35:37,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-10-23 00:35:38,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-10-23 00:35:38,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-10-23 00:35:39,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-10-23 00:35:39,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-10-23 00:35:39,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-10-23 00:35:40,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-23 00:35:40,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-23 00:35:41,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-23 00:35:41,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-10-23 00:35:41,765 [    scc.repo] DEBUG   - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-23 00:35:42,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-10-23 00:35:42,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-10-23 00:35:43,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-10-23 00:35:43,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-10-23 00:35:43,597 [    scc.repo] DEBUG ## Branches found:
2024-10-23 00:35:43,597 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-23 00:35:43,597 [     scc.git] DEBUG Get sha1 of %s
2024-10-23 00:35:43,597 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:35:43,602 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-10-23 00:35:43,606 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-23 00:35:43,606 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-10-23 00:35:43,610 [     scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-10-23 00:35:43,614 [     scc.git] DEBUG Already up to date.

2024-10-23 00:35:43,614 [     scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-10-23 00:35:44,144 [     scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-23 00:35:44,144 [     scc.git] DEBUG  * branch            refs/pull/202/head -> FETCH_HEAD
2024-10-23 00:35:44,149 [     scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-10-23 00:35:44,637 [     scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-23 00:35:44,637 [     scc.git] DEBUG  * branch            refs/pull/223/head -> FETCH_HEAD
2024-10-23 00:35:44,642 [     scc.git] DEBUG ## Unique users: []
2024-10-23 00:35:44,642 [     scc.git] DEBUG Get sha1 of %s
2024-10-23 00:35:44,642 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:35:44,647 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-23 00:35:44,654 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:35:44,658 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-23 00:35:44,793 [     scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-10-23 00:35:44,793 [     scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-10-23 00:35:44,793 [     scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-10-23 00:35:44,794 [     scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-10-23 00:35:44,798 [     scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-23 00:35:44,803 [     scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-23 00:35:44,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:35:44,941 [     scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-23 00:35:44,947 [     scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-23 00:35:44,951 [     scc.git] INFO    - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#210](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/210/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/210/consoleText) for more details.
Possible conflicts:
  - Upstream changes
    - omero/annotation_scripts/KeyVal_to_csv.py

--conflicts

2024-10-23 00:35:44,955 [  scc.config] DEBUG Found github.token
2024-10-23 00:35:44,955 [     scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-10-23 00:35:44,955 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-23 00:35:44,960 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:35:44,966 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-23 00:35:44,976 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-23 00:35:44,978 [     scc.git] DEBUG  omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-10-23 00:35:44,978 [     scc.git] DEBUG  1 file changed, 8 insertions(+), 1 deletion(-)
2024-10-23 00:35:45,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:35:45,333 [     scc.git] DEBUG Calling 'git submodule update'
2024-10-23 00:35:45,373 [     scc.git] DEBUG Get sha1 of %s
2024-10-23 00:35:45,373 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:35:45,378 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-23 00:35:45,416 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-10-23 00:35:45,422 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fe9f846abe0> has no local changes
2024-10-23 00:35:45,422 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-scripts
Excluded PRs:
  - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
  - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
  - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
  - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.

Merged PRs:
  - PR 223 will-moore 'don't attempt ROI stats on big images'

Conflicting PRs (not included):
  - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'

Generated by OMERO-python-superbuild-push#210 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/210/)'
2024-10-23 00:35:45,429 [     scc.git] DEBUG [detached HEAD 4196120] merge master -Dorg -Ssuccess-only
2024-10-23 00:35:45,429 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-23 00:35:45,429 [    scc.repo] DEBUG ## PRs found:
2024-10-23 00:35:45,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-10-23 00:35:46,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/589 HTTP/1.1" 200 None
2024-10-23 00:35:46,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/33cf0eb27577cdf0651aa994cfd52add56f49459 HTTP/1.1" 200 None
2024-10-23 00:35:47,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/33cf0eb27577cdf0651aa994cfd52add56f49459/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-23 00:35:47,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/33cf0eb27577cdf0651aa994cfd52add56f49459/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-23 00:35:48,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/33cf0eb27577cdf0651aa994cfd52add56f49459 HTTP/1.1" 200 None
2024-10-23 00:35:48,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/33cf0eb27577cdf0651aa994cfd52add56f49459?per_page=1 HTTP/1.1" 200 None
2024-10-23 00:35:49,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/33cf0eb27577cdf0651aa994cfd52add56f49459 HTTP/1.1" 200 None
2024-10-23 00:35:49,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/33cf0eb27577cdf0651aa994cfd52add56f49459/status HTTP/1.1" 200 None
2024-10-23 00:35:49,501 [    scc.repo] DEBUG   - PR 589 knabar 'Remove Python 2 compatibility import'
2024-10-23 00:35:49,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/585 HTTP/1.1" 200 None
2024-10-23 00:35:50,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583 HTTP/1.1" 200 None
2024-10-23 00:35:50,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583/comments HTTP/1.1" 200 None
2024-10-23 00:35:51,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-23 00:35:51,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-23 00:35:52,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-23 00:35:52,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-23 00:35:53,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/aa50f469842b9687c74df8765d72241e6e37d32c?per_page=1 HTTP/1.1" 200 None
2024-10-23 00:35:53,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-23 00:35:54,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/status HTTP/1.1" 200 None
2024-10-23 00:35:54,080 [    scc.repo] DEBUG   - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-23 00:35:54,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581 HTTP/1.1" 200 None
2024-10-23 00:35:55,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581/comments HTTP/1.1" 200 None
2024-10-23 00:35:55,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/580 HTTP/1.1" 200 None
2024-10-23 00:35:55,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-23 00:35:56,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-23 00:35:56,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-23 00:35:57,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-23 00:35:57,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc?per_page=1 HTTP/1.1" 200 None
2024-10-23 00:35:58,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-23 00:35:58,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/status HTTP/1.1" 200 None
2024-10-23 00:35:58,541 [    scc.repo] DEBUG   - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-23 00:35:58,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-10-23 00:35:59,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-10-23 00:35:59,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-10-23 00:36:00,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-10-23 00:36:00,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-23 00:36:01,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-23 00:36:01,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-23 00:36:02,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-23 00:36:02,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-10-23 00:36:03,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-23 00:36:03,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-10-23 00:36:03,604 [    scc.repo] DEBUG   - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-23 00:36:04,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-10-23 00:36:04,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-10-23 00:36:05,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-23 00:36:05,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-23 00:36:05,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-23 00:36:06,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-23 00:36:06,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-10-23 00:36:07,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-23 00:36:07,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-10-23 00:36:07,706 [    scc.repo] DEBUG   - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-23 00:36:08,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-10-23 00:36:08,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-10-23 00:36:09,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-10-23 00:36:09,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-23 00:36:10,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-23 00:36:10,077 [    scc.repo] DEBUG ## Branches found:
2024-10-23 00:36:10,077 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-23 00:36:10,077 [     scc.git] DEBUG Get sha1 of %s
2024-10-23 00:36:10,077 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:36:10,082 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-23 00:36:10,085 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-23 00:36:10,086 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-23 00:36:10,186 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-23 00:36:10,192 [     scc.git] DEBUG Already up to date.

2024-10-23 00:36:10,192 [     scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-10-23 00:36:11,398 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-23 00:36:11,398 [     scc.git] DEBUG  * branch                refs/pull/527/head -> FETCH_HEAD
2024-10-23 00:36:11,402 [     scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-10-23 00:36:11,716 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-23 00:36:11,717 [     scc.git] DEBUG  * branch                refs/pull/534/head -> FETCH_HEAD
2024-10-23 00:36:11,721 [     scc.git] DEBUG Calling 'git fetch origin pull/580/head'
2024-10-23 00:36:12,482 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-23 00:36:12,482 [     scc.git] DEBUG  * branch                refs/pull/580/head -> FETCH_HEAD
2024-10-23 00:36:12,486 [     scc.git] DEBUG Calling 'git fetch origin pull/583/head'
2024-10-23 00:36:12,847 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-23 00:36:12,847 [     scc.git] DEBUG  * branch                refs/pull/583/head -> FETCH_HEAD
2024-10-23 00:36:12,851 [     scc.git] DEBUG Calling 'git fetch origin pull/589/head'
2024-10-23 00:36:13,345 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-23 00:36:13,346 [     scc.git] DEBUG  * branch                refs/pull/589/head -> FETCH_HEAD
2024-10-23 00:36:13,348 [     scc.git] DEBUG ## Unique users: []
2024-10-23 00:36:13,349 [     scc.git] DEBUG Get sha1 of %s
2024-10-23 00:36:13,349 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:36:13,353 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-23 00:36:13,359 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:36:13,363 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-23 00:36:13,495 [     scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-10-23 00:36:13,495 [     scc.git] DEBUG Auto-merging setup.py
2024-10-23 00:36:13,496 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-23 00:36:13,500 [     scc.git] DEBUG  omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-10-23 00:36:13,500 [     scc.git] DEBUG  setup.py             |  1 +
2024-10-23 00:36:13,500 [     scc.git] DEBUG  2 files changed, 42 insertions(+), 1 deletion(-)
2024-10-23 00:36:13,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:36:13,635 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-23 00:36:13,643 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:36:13,647 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-23 00:36:13,854 [     scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-10-23 00:36:13,854 [     scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-10-23 00:36:13,856 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-23 00:36:13,861 [     scc.git] DEBUG  omeroweb/webclient/webclient_gateway.py | 2 +-
2024-10-23 00:36:13,861 [     scc.git] DEBUG  omeroweb/webgateway/marshal.py          | 4 ++--
2024-10-23 00:36:13,861 [     scc.git] DEBUG  2 files changed, 3 insertions(+), 3 deletions(-)
2024-10-23 00:36:14,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:36:14,016 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-23 00:36:14,023 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:36:14,028 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 580 (omeroweb.webgateway.obj_id_bitmask: handle empty query results) 1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-23 00:36:14,148 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-23 00:36:14,152 [     scc.git] DEBUG  omeroweb/webgateway/views.py | 6 ++++++
2024-10-23 00:36:14,152 [     scc.git] DEBUG  1 file changed, 6 insertions(+)
2024-10-23 00:36:14,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:36:14,402 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-23 00:36:14,411 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:36:14,416 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Allow users to click a group name to show data from all users in that group) aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-23 00:36:14,498 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-23 00:36:14,501 [     scc.git] DEBUG  .../templates/webclient/base/includes/group_user_content.html       | 6 +++++-
2024-10-23 00:36:14,501 [     scc.git] DEBUG  .../templates/webclient/base/includes/group_user_dropdown2.html     | 2 --
2024-10-23 00:36:14,501 [     scc.git] DEBUG  2 files changed, 5 insertions(+), 3 deletions(-)
2024-10-23 00:36:14,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:36:14,778 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...33cf0eb27577cdf0651aa994cfd52add56f49459'
2024-10-23 00:36:14,786 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:36:14,791 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 589 (Remove Python 2 compatibility import) 33cf0eb27577cdf0651aa994cfd52add56f49459'
2024-10-23 00:36:14,811 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-23 00:36:14,814 [     scc.git] DEBUG  omeroweb/urls.py | 4 ++--
2024-10-23 00:36:14,814 [     scc.git] DEBUG  1 file changed, 2 insertions(+), 2 deletions(-)
2024-10-23 00:36:15,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:36:15,159 [     scc.git] DEBUG Calling 'git submodule update'
2024-10-23 00:36:15,196 [     scc.git] DEBUG Get sha1 of %s
2024-10-23 00:36:15,196 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-23 00:36:15,200 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-23 00:36:15,237 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-10-23 00:36:15,246 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fe9f83befa0> has no local changes
2024-10-23 00:36:15,246 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-web
Excluded PRs:
  - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
  - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
  - PR 535 will-moore 'Initial working browser history' (stage: draft)
  - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.

Merged PRs:
  - PR 527 will-moore 'Add some initial CSP settings to test'
  - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
  - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
  - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
  - PR 589 knabar 'Remove Python 2 compatibility import'

Generated by OMERO-python-superbuild-push#210 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/210/)'
2024-10-23 00:36:15,257 [     scc.git] DEBUG [detached HEAD 89d189175] merge master -Dorg -Ssuccess-only
2024-10-23 00:36:15,257 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-23 00:36:15,257 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-23 00:36:15,304 [  scc.config] DEBUG Found submodule.omero-dropbox.url
2024-10-23 00:36:15,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:36:15,558 [  scc.config] DEBUG Found submodule.omero-marshal.url
2024-10-23 00:36:15,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:36:15,941 [  scc.config] DEBUG Found submodule.omero-py.url
2024-10-23 00:36:16,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:36:16,357 [  scc.config] DEBUG Found submodule.omero-scripts.url
2024-10-23 00:36:16,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:36:16,742 [  scc.config] DEBUG Found submodule.omero-web.url
2024-10-23 00:36:17,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-23 00:36:17,129 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-10-23 00:36:17,154 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fe9f976a8b0> has local changes
2024-10-23 00:36:17,155 [     scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-python-superbuild
Already up to date.

Merged PRs:
  - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'

Repository: ome/omero-dropbox
Already up to date.

Merged PRs:
  - PR 16 joshmoore 'Review all instances of whitelist/blacklist'

Repository: ome/omero-marshal
Excluded PRs:
  - PR 34 chris-allan 'Initial support for Event' (exclude comment)
  - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.

Merged PRs:
  - PR 69 will-moore 'Roi encoder allows Shape None'

Repository: ome/omero-py
Excluded PRs:
  - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
  - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
  - PR 387 will-moore 'Numpy pixels type' (label: exclude)
  - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
  - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
  - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.

Merged PRs:
  - PR 199 joshmoore 'user: allow setting default group'
  - PR 207 manics 'BlitzGateway.connect raise on error'
  - PR 266 joshmoore 'errors: use raise_error from cli plugins'
  - PR 299 joshmoore 'Add parents and children to omero obj'
  - PR 332 jburel 'Build conda'
  - PR 337 will-moore 'bulk.yml depth is passed to xargs'
  - PR 391 joshmoore 'Add jstack command'
  - PR 408 jburel 'remove deprecated method'
  - PR 427 Rdornier 'Add fileset folder creation'
  - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'

Repository: ome/omero-scripts
Excluded PRs:
  - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
  - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
  - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
  - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.

Merged PRs:
  - PR 223 will-moore 'don't attempt ROI stats on big images'

Conflicting PRs (not included):
  - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'

Repository: ome/omero-web
Excluded PRs:
  - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
  - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
  - PR 535 will-moore 'Initial working browser history' (stage: draft)
  - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.

Merged PRs:
  - PR 527 will-moore 'Add some initial CSP settings to test'
  - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
  - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
  - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
  - PR 589 knabar 'Remove Python 2 compatibility import'

Generated by OMERO-python-superbuild-push#210 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/210/)'
2024-10-23 00:36:17,163 [     scc.git] DEBUG [detached HEAD b584d43] merge master -Dorg -Ssuccess-only
2024-10-23 00:36:17,163 [   scc.merge] INFO  Repository: ome/omero-python-superbuild
2024-10-23 00:36:17,163 [     scc.git] DEBUG  6 files changed, 10 insertions(+), 10 deletions(-)
2024-10-23 00:36:17,163 [   scc.merge] INFO  Already up to date.
2024-10-23 00:36:17,163 [   scc.merge] INFO  
2024-10-23 00:36:17,164 [   scc.merge] INFO  Merged PRs:
2024-10-23 00:36:17,164 [   scc.merge] INFO    - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-23 00:36:17,164 [   scc.merge] INFO  
2024-10-23 00:36:17,164 [   scc.merge] INFO  Repository: ome/omero-dropbox
2024-10-23 00:36:17,164 [   scc.merge] INFO  Already up to date.
2024-10-23 00:36:17,164 [   scc.merge] INFO  
2024-10-23 00:36:17,164 [   scc.merge] INFO  Merged PRs:
2024-10-23 00:36:17,164 [   scc.merge] INFO    - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-23 00:36:17,164 [   scc.merge] INFO  
2024-10-23 00:36:17,164 [   scc.merge] INFO  Repository: ome/omero-marshal
2024-10-23 00:36:17,164 [   scc.merge] INFO  Excluded PRs:
2024-10-23 00:36:17,164 [   scc.merge] INFO    - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-10-23 00:36:17,164 [   scc.merge] INFO    - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-10-23 00:36:17,164 [   scc.merge] INFO  Already up to date.
2024-10-23 00:36:17,164 [   scc.merge] INFO  
2024-10-23 00:36:17,164 [   scc.merge] INFO  Merged PRs:
2024-10-23 00:36:17,164 [   scc.merge] INFO    - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-23 00:36:17,164 [   scc.merge] INFO  
2024-10-23 00:36:17,164 [   scc.merge] INFO  Repository: ome/omero-py
2024-10-23 00:36:17,164 [   scc.merge] INFO  Excluded PRs:
2024-10-23 00:36:17,164 [   scc.merge] INFO    - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
2024-10-23 00:36:17,164 [   scc.merge] INFO    - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-10-23 00:36:17,164 [   scc.merge] INFO    - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-10-23 00:36:17,164 [   scc.merge] INFO    - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-10-23 00:36:17,164 [   scc.merge] INFO    - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-10-23 00:36:17,164 [   scc.merge] INFO    - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-10-23 00:36:17,164 [   scc.merge] INFO  Already up to date.
2024-10-23 00:36:17,164 [   scc.merge] INFO  
2024-10-23 00:36:17,164 [   scc.merge] INFO  Merged PRs:
2024-10-23 00:36:17,164 [   scc.merge] INFO    - PR 199 joshmoore 'user: allow setting default group'
2024-10-23 00:36:17,164 [   scc.merge] INFO    - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-23 00:36:17,164 [   scc.merge] INFO    - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-23 00:36:17,164 [   scc.merge] INFO    - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-23 00:36:17,164 [   scc.merge] INFO    - PR 332 jburel 'Build conda'
2024-10-23 00:36:17,164 [   scc.merge] INFO    - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-23 00:36:17,164 [   scc.merge] INFO    - PR 391 joshmoore 'Add jstack command'
2024-10-23 00:36:17,164 [   scc.merge] INFO    - PR 408 jburel 'remove deprecated method'
2024-10-23 00:36:17,164 [   scc.merge] INFO    - PR 427 Rdornier 'Add fileset folder creation'
2024-10-23 00:36:17,164 [   scc.merge] INFO    - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-23 00:36:17,165 [   scc.merge] INFO  
2024-10-23 00:36:17,165 [   scc.merge] INFO  Repository: ome/omero-scripts
2024-10-23 00:36:17,165 [   scc.merge] INFO  Excluded PRs:
2024-10-23 00:36:17,165 [   scc.merge] INFO    - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-10-23 00:36:17,165 [   scc.merge] INFO    - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-10-23 00:36:17,165 [   scc.merge] INFO    - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-10-23 00:36:17,165 [   scc.merge] INFO    - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-10-23 00:36:17,165 [   scc.merge] INFO  Already up to date.
2024-10-23 00:36:17,165 [   scc.merge] INFO  
2024-10-23 00:36:17,165 [   scc.merge] INFO  Merged PRs:
2024-10-23 00:36:17,165 [   scc.merge] INFO    - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-23 00:36:17,165 [   scc.merge] INFO  
2024-10-23 00:36:17,165 [   scc.merge] INFO  Conflicting PRs (not included):
2024-10-23 00:36:17,165 [   scc.merge] INFO    - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-23 00:36:17,165 [   scc.merge] INFO  
2024-10-23 00:36:17,165 [   scc.merge] INFO  Repository: ome/omero-web
2024-10-23 00:36:17,165 [   scc.merge] INFO  Excluded PRs:
2024-10-23 00:36:17,165 [   scc.merge] INFO    - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-10-23 00:36:17,165 [   scc.merge] INFO    - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
2024-10-23 00:36:17,165 [   scc.merge] INFO    - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-10-23 00:36:17,165 [   scc.merge] INFO    - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-10-23 00:36:17,165 [   scc.merge] INFO  Already up to date.
2024-10-23 00:36:17,165 [   scc.merge] INFO  
2024-10-23 00:36:17,165 [   scc.merge] INFO  Merged PRs:
2024-10-23 00:36:17,165 [   scc.merge] INFO    - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-23 00:36:17,165 [   scc.merge] INFO    - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-23 00:36:17,165 [   scc.merge] INFO    - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-23 00:36:17,165 [   scc.merge] INFO    - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-23 00:36:17,165 [   scc.merge] INFO    - PR 589 knabar 'Remove Python 2 compatibility import'
2024-10-23 00:36:17,165 [   scc.merge] INFO  
2024-10-23 00:36:17,165 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-23 00:36:17,165 [     scc.git] DEBUG Calling 'git remote'
2024-10-23 00:36:17,170 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-23 00:36:17,170 [     scc.git] DEBUG Calling 'git remote'
2024-10-23 00:36:17,174 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-23 00:36:17,174 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-23 00:36:17,174 [     scc.git] DEBUG Calling 'git remote'
2024-10-23 00:36:17,178 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-23 00:36:17,178 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-23 00:36:17,178 [     scc.git] DEBUG Calling 'git remote'
2024-10-23 00:36:17,182 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-23 00:36:17,182 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-23 00:36:17,182 [     scc.git] DEBUG Calling 'git remote'
2024-10-23 00:36:17,185 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-23 00:36:17,185 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-23 00:36:17,185 [     scc.git] DEBUG Calling 'git remote'
2024-10-23 00:36:17,189 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
    download_blitz_target()
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
    resp = urlopen(loc)
  File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
    return opener.open(url, data, timeout)
  File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
    response = meth(req, response)
  File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
    response = self.parent.error(
  File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
    return self._call_chain(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
    result = func(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
    raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
    download_blitz_target()
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
    resp = urlopen(loc)
  File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
    return opener.open(url, data, timeout)
  File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
    response = meth(req, response)
  File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
    response = self.parent.error(
  File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
    return self._call_chain(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
    result = func(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
    raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 4fd72efa
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from da5b7d11f
nothing to commit, working tree clean
HEAD detached from e849d72
nothing to commit, working tree clean
2024-10-23 00:36:44,325 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS