Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-10-27 00:34:19,201 [ scc.config] DEBUG Found github.token
2024-10-27 00:34:19,204 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-27 00:34:19,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:34:19,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:34:20,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-27 00:34:20,138 [ scc.gh] DEBUG 4365 remaining from 5000 (Reset at 00:10
2024-10-27 00:34:20,139 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-27 00:34:20,143 [ scc.git] DEBUG Check current status
2024-10-27 00:34:20,143 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-27 00:34:20,146 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-27 00:34:20,147 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-27 00:34:20,189 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-27 00:34:20,192 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-27 00:34:20,195 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-27 00:34:20,199 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-27 00:34:20,203 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-27 00:34:20,208 [ scc.config] DEBUG Found remote.origin.url
2024-10-27 00:34:20,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-27 00:34:21,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-27 00:34:21,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-27 00:34:21,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-27 00:34:22,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-27 00:34:22,219 [ scc.git] DEBUG Resetting...
2024-10-27 00:34:22,219 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-27 00:34:22,225 [ scc.git] DEBUG HEAD is now at e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-27 00:34:22,225 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-27 00:34:22,274 [ scc.git] DEBUG Check current status
2024-10-27 00:34:22,274 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-27 00:34:22,278 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-27 00:34:22,278 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-27 00:34:22,317 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-27 00:34:22,319 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-27 00:34:22,323 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-27 00:34:22,326 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-27 00:34:22,330 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-27 00:34:22,331 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-27 00:34:22,331 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-27 00:34:22,331 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-27 00:34:22,331 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-27 00:34:22,331 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-27 00:34:22,331 [ scc.repo] DEBUG ## PRs found:
2024-10-27 00:34:22,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-27 00:34:23,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-27 00:34:23,129 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-27 00:34:23,129 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-27 00:34:23,129 [ scc.repo] DEBUG ## Branches found:
2024-10-27 00:34:23,129 [ scc.git] DEBUG Get sha1 of %s
2024-10-27 00:34:23,129 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:34:23,133 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-27 00:34:23,137 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-27 00:34:23,137 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-27 00:34:23,142 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-27 00:34:23,146 [ scc.git] DEBUG Already up to date.
2024-10-27 00:34:23,146 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-27 00:34:23,458 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-27 00:34:23,458 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-27 00:34:23,465 [ scc.git] DEBUG ## Unique users: []
2024-10-27 00:34:23,465 [ scc.git] DEBUG Get sha1 of %s
2024-10-27 00:34:23,466 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:34:23,470 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-27 00:34:23,515 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:34:23,520 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-27 00:34:23,530 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-27 00:34:23,532 [ scc.git] DEBUG omero-py | 2 +-
2024-10-27 00:34:23,532 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-10-27 00:34:23,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:34:23,659 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-27 00:34:23,999 [ scc.git] DEBUG Submodule path 'omero-py': checked out '4fd72efaa8cdbec9da98e1d28678af16878a86ba'
2024-10-27 00:34:24,000 [ scc.git] DEBUG Get sha1 of %s
2024-10-27 00:34:24,000 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:34:24,004 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-27 00:34:24,740 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7eff03dcb8b0> has no local changes
2024-10-27 00:34:24,741 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Generated by OMERO-python-superbuild-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/215/)'
2024-10-27 00:34:24,766 [ scc.git] DEBUG [detached HEAD 1b6140e] merge master -Dorg -Snone
2024-10-27 00:34:24,767 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-27 00:34:24,767 [ scc.merge] INFO Already up to date.
2024-10-27 00:34:24,767 [ scc.merge] INFO
2024-10-27 00:34:24,767 [ scc.merge] INFO Merged PRs:
2024-10-27 00:34:24,767 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-27 00:34:24,767 [ scc.merge] INFO
2024-10-27 00:34:24,767 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-27 00:34:24,767 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-27 00:34:27,087 [ scc.config] DEBUG Found github.token
2024-10-27 00:34:27,090 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-27 00:34:27,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:34:27,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:34:28,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-27 00:34:28,006 [ scc.gh] DEBUG 4355 remaining from 5000 (Reset at 00:10
2024-10-27 00:34:28,007 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-27 00:34:28,011 [ scc.git] DEBUG Check current status
2024-10-27 00:34:28,011 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-27 00:34:28,015 [ scc.git] DEBUG 1b6140e merge master -Dorg -Snone
2024-10-27 00:34:28,015 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-27 00:34:28,057 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-27 00:34:28,061 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-27 00:34:28,065 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-27 00:34:28,069 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-27 00:34:28,072 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-27 00:34:28,079 [ scc.config] DEBUG Found remote.origin.url
2024-10-27 00:34:28,080 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-10-27 00:34:28,081 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-27 00:34:28,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-27 00:34:28,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-27 00:34:29,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-27 00:34:29,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-27 00:34:30,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-27 00:34:30,096 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-27 00:34:30,145 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-27 00:34:30,145 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-27 00:34:30,150 [ scc.git] DEBUG Check current status
2024-10-27 00:34:30,150 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-27 00:34:30,154 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-10-27 00:34:30,154 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-27 00:34:30,197 [ scc.config] DEBUG Found remote.origin.url
2024-10-27 00:34:30,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-10-27 00:34:31,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-27 00:34:31,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-27 00:34:31,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-27 00:34:32,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-27 00:34:32,274 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-27 00:34:32,317 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-27 00:34:32,318 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-27 00:34:32,318 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-27 00:34:32,324 [ scc.git] DEBUG Check current status
2024-10-27 00:34:32,324 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-27 00:34:32,328 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-10-27 00:34:32,329 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-27 00:34:32,381 [ scc.config] DEBUG Found remote.origin.url
2024-10-27 00:34:32,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-10-27 00:34:33,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-27 00:34:33,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-27 00:34:33,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-27 00:34:34,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-27 00:34:34,341 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-27 00:34:34,383 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-27 00:34:34,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-27 00:34:34,384 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-27 00:34:34,389 [ scc.git] DEBUG Check current status
2024-10-27 00:34:34,389 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-27 00:34:34,395 [ scc.git] DEBUG 4fd72efa Bump version: 5.19.5 → 5.19.6.dev0
2024-10-27 00:34:34,395 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-27 00:34:34,441 [ scc.config] DEBUG Found remote.origin.url
2024-10-27 00:34:34,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-10-27 00:34:35,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-27 00:34:35,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-27 00:34:36,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-27 00:34:36,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-27 00:34:36,430 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-27 00:34:36,471 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-27 00:34:36,472 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-27 00:34:36,472 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-27 00:34:36,477 [ scc.git] DEBUG Check current status
2024-10-27 00:34:36,477 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-27 00:34:36,498 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-27 00:34:36,499 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-27 00:34:36,543 [ scc.config] DEBUG Found remote.origin.url
2024-10-27 00:34:36,544 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-10-27 00:34:36,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-10-27 00:34:37,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-27 00:34:37,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-27 00:34:38,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-27 00:34:38,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-27 00:34:38,531 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-27 00:34:38,571 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-27 00:34:38,572 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-27 00:34:38,572 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-27 00:34:38,577 [ scc.git] DEBUG Check current status
2024-10-27 00:34:38,578 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-27 00:34:38,582 [ scc.git] DEBUG da5b7d11f Bump version: 5.27.2 → 5.27.3.dev0
2024-10-27 00:34:38,583 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-27 00:34:38,624 [ scc.config] DEBUG Found remote.origin.url
2024-10-27 00:34:38,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-10-27 00:34:39,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-27 00:34:39,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-27 00:34:40,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-27 00:34:40,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-27 00:34:40,647 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-27 00:34:40,688 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-27 00:34:40,688 [ scc.git] DEBUG Resetting...
2024-10-27 00:34:40,688 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-27 00:34:40,694 [ scc.git] DEBUG HEAD is now at 1b6140e merge master -Dorg -Snone
2024-10-27 00:34:40,695 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-27 00:34:40,749 [ scc.git] DEBUG Check current status
2024-10-27 00:34:40,749 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-27 00:34:40,754 [ scc.git] DEBUG 1b6140e merge master -Dorg -Snone
2024-10-27 00:34:40,754 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-27 00:34:40,796 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-27 00:34:40,799 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-27 00:34:40,803 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-27 00:34:40,807 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-27 00:34:40,810 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-27 00:34:40,811 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-27 00:34:40,811 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-27 00:34:40,811 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-27 00:34:40,812 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-27 00:34:40,812 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-27 00:34:40,812 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-10-27 00:34:40,812 [ scc.repo] DEBUG ## PRs found:
2024-10-27 00:34:41,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-27 00:34:41,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-27 00:34:41,565 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-27 00:34:42,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-27 00:34:42,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-27 00:34:43,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-27 00:34:43,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/9660559833988d271074de56e54f2462a7be74e9?per_page=1 HTTP/1.1" 200 2
2024-10-27 00:34:43,524 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-27 00:34:43,525 [ scc.repo] DEBUG ## Branches found:
2024-10-27 00:34:43,525 [ scc.git] DEBUG Get sha1 of %s
2024-10-27 00:34:43,525 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:34:43,530 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-27 00:34:43,534 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-27 00:34:43,534 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-27 00:34:43,538 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-27 00:34:43,542 [ scc.git] DEBUG Already up to date.
2024-10-27 00:34:43,542 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-27 00:34:43,830 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-27 00:34:43,830 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-27 00:34:43,835 [ scc.git] DEBUG ## Unique users: []
2024-10-27 00:34:43,835 [ scc.git] DEBUG Get sha1 of %s
2024-10-27 00:34:43,835 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:34:43,840 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-27 00:34:43,845 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:34:43,849 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-27 00:34:43,854 [ scc.git] DEBUG Already up to date.
2024-10-27 00:34:43,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:34:43,979 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-27 00:34:44,022 [ scc.git] DEBUG Get sha1 of %s
2024-10-27 00:34:44,022 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:34:44,027 [ scc.repo] DEBUG ## PRs found:
2024-10-27 00:34:44,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-10-27 00:34:44,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-10-27 00:34:45,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-10-27 00:34:45,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-27 00:34:46,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-27 00:34:46,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-27 00:34:47,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-10-27 00:34:47,219 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-27 00:34:47,219 [ scc.repo] DEBUG ## Branches found:
2024-10-27 00:34:47,219 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-27 00:34:47,219 [ scc.git] DEBUG Get sha1 of %s
2024-10-27 00:34:47,219 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:34:47,224 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-27 00:34:47,228 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-27 00:34:47,228 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-27 00:34:47,233 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-27 00:34:47,236 [ scc.git] DEBUG Already up to date.
2024-10-27 00:34:47,237 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-10-27 00:34:47,542 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-10-27 00:34:47,542 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-10-27 00:34:47,547 [ scc.git] DEBUG ## Unique users: []
2024-10-27 00:34:47,547 [ scc.git] DEBUG Get sha1 of %s
2024-10-27 00:34:47,547 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:34:47,552 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-27 00:34:47,557 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:34:47,562 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-27 00:34:48,334 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-10-27 00:34:48,335 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-10-27 00:34:48,335 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-10-27 00:34:48,335 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-10-27 00:34:48,335 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-10-27 00:34:48,335 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-10-27 00:34:48,335 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-10-27 00:34:48,335 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-10-27 00:34:48,335 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-10-27 00:34:48,335 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-27 00:34:48,339 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-10-27 00:34:48,339 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-10-27 00:34:48,339 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-10-27 00:34:48,339 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-10-27 00:34:48,339 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-10-27 00:34:48,339 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-10-27 00:34:48,339 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-10-27 00:34:48,339 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-10-27 00:34:48,339 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-10-27 00:34:48,339 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-10-27 00:34:48,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:34:48,463 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-27 00:34:48,502 [ scc.git] DEBUG Get sha1 of %s
2024-10-27 00:34:48,502 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:34:48,507 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-27 00:34:48,545 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-27 00:34:48,551 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fb4c49e79a0> has no local changes
2024-10-27 00:34:48,552 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/215/)'
2024-10-27 00:34:48,560 [ scc.git] DEBUG [detached HEAD 7cce426] merge master -Dorg -Ssuccess-only
2024-10-27 00:34:48,561 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-27 00:34:48,561 [ scc.repo] DEBUG ## PRs found:
2024-10-27 00:34:48,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-10-27 00:34:49,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-10-27 00:34:49,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-10-27 00:34:50,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-27 00:34:50,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-27 00:34:51,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-27 00:34:51,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-10-27 00:34:51,630 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-27 00:34:52,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-10-27 00:34:52,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-10-27 00:34:52,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-10-27 00:34:53,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-10-27 00:34:53,367 [ scc.repo] DEBUG ## Branches found:
2024-10-27 00:34:53,367 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-27 00:34:53,368 [ scc.git] DEBUG Get sha1 of %s
2024-10-27 00:34:53,368 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:34:53,372 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-27 00:34:53,376 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-27 00:34:53,376 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-27 00:34:53,380 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-27 00:34:53,384 [ scc.git] DEBUG Already up to date.
2024-10-27 00:34:53,384 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-10-27 00:34:53,827 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-10-27 00:34:53,827 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-10-27 00:34:53,832 [ scc.git] DEBUG ## Unique users: []
2024-10-27 00:34:53,832 [ scc.git] DEBUG Get sha1 of %s
2024-10-27 00:34:53,832 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:34:53,837 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-27 00:34:53,842 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:34:53,845 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-27 00:34:53,860 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-10-27 00:34:53,860 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-27 00:34:53,863 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-10-27 00:34:53,863 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-10-27 00:34:53,863 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-10-27 00:34:53,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:34:53,995 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-27 00:34:54,033 [ scc.git] DEBUG Get sha1 of %s
2024-10-27 00:34:54,034 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:34:54,038 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-27 00:34:54,079 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-27 00:34:54,085 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fb4c4980820> has no local changes
2024-10-27 00:34:54,085 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/215/)'
2024-10-27 00:34:54,092 [ scc.git] DEBUG [detached HEAD edb0703] merge master -Dorg -Ssuccess-only
2024-10-27 00:34:54,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-27 00:34:54,092 [ scc.repo] DEBUG ## PRs found:
2024-10-27 00:34:54,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-10-27 00:34:55,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/431 HTTP/1.1" 200 None
2024-10-27 00:34:55,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-27 00:34:56,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-27 00:34:56,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-27 00:34:56,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-27 00:34:57,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0e500ec05bf9227b66b28a480b40e0936241d953?per_page=1 HTTP/1.1" 200 None
2024-10-27 00:34:57,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-27 00:34:58,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/status HTTP/1.1" 200 None
2024-10-27 00:34:58,187 [ scc.repo] DEBUG - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-27 00:34:58,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None
2024-10-27 00:34:59,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None
2024-10-27 00:34:59,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None
2024-10-27 00:34:59,553 [ scc.repo] DEBUG # ... Include label: include
2024-10-27 00:35:00,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-27 00:35:00,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-27 00:35:01,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-27 00:35:01,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-27 00:35:01,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1?per_page=1 HTTP/1.1" 200 None
2024-10-27 00:35:02,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-27 00:35:02,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/status HTTP/1.1" 200 None
2024-10-27 00:35:02,863 [ scc.repo] DEBUG - PR 427 Rdornier 'Add fileset folder creation'
2024-10-27 00:35:03,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-10-27 00:35:03,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-10-27 00:35:04,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-27 00:35:04,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-27 00:35:05,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-27 00:35:05,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-27 00:35:06,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-10-27 00:35:06,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-27 00:35:06,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-10-27 00:35:06,933 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-10-27 00:35:07,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-10-27 00:35:07,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-10-27 00:35:08,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-10-27 00:35:08,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-27 00:35:09,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-27 00:35:09,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-10-27 00:35:10,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-27 00:35:10,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-27 00:35:11,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-27 00:35:11,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-27 00:35:11,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-10-27 00:35:12,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-27 00:35:12,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-10-27 00:35:12,864 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-10-27 00:35:13,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-10-27 00:35:13,319 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-10-27 00:35:13,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-10-27 00:35:14,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-10-27 00:35:14,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-27 00:35:15,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-27 00:35:15,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-27 00:35:16,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-10-27 00:35:16,030 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-27 00:35:16,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-10-27 00:35:16,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-10-27 00:35:17,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-27 00:35:17,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-27 00:35:18,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-27 00:35:18,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-27 00:35:19,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-10-27 00:35:19,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-27 00:35:20,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-10-27 00:35:20,207 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-10-27 00:35:20,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-10-27 00:35:21,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-10-27 00:35:21,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-10-27 00:35:22,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-10-27 00:35:22,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-27 00:35:22,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-27 00:35:23,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-27 00:35:23,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-10-27 00:35:23,923 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-27 00:35:24,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-10-27 00:35:24,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-27 00:35:25,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-27 00:35:25,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-27 00:35:26,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-10-27 00:35:26,250 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-27 00:35:26,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-10-27 00:35:27,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-10-27 00:35:27,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-27 00:35:28,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-27 00:35:28,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-27 00:35:29,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-10-27 00:35:29,166 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-27 00:35:29,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-10-27 00:35:30,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-10-27 00:35:30,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-27 00:35:30,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-27 00:35:31,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-27 00:35:31,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-10-27 00:35:31,929 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-10-27 00:35:32,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-10-27 00:35:32,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-10-27 00:35:33,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-10-27 00:35:33,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-10-27 00:35:33,679 [ scc.repo] DEBUG ## Branches found:
2024-10-27 00:35:33,679 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-27 00:35:33,679 [ scc.git] DEBUG Get sha1 of %s
2024-10-27 00:35:33,679 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:35:33,685 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-27 00:35:33,689 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-27 00:35:33,689 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-27 00:35:33,767 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-27 00:35:33,773 [ scc.git] DEBUG Already up to date.
2024-10-27 00:35:33,773 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-10-27 00:35:34,706 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-27 00:35:34,706 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-10-27 00:35:34,711 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-10-27 00:35:34,994 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-27 00:35:34,994 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-10-27 00:35:34,998 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-10-27 00:35:35,316 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-27 00:35:35,316 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-10-27 00:35:35,321 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-10-27 00:35:35,604 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-27 00:35:35,604 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-10-27 00:35:35,609 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-10-27 00:35:36,014 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-27 00:35:36,014 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-10-27 00:35:36,019 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-10-27 00:35:36,303 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-27 00:35:36,303 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-10-27 00:35:36,307 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-10-27 00:35:36,593 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-27 00:35:36,593 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-10-27 00:35:36,597 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-10-27 00:35:37,007 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-27 00:35:37,007 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-10-27 00:35:37,012 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head'
2024-10-27 00:35:37,903 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-27 00:35:37,903 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD
2024-10-27 00:35:37,908 [ scc.git] DEBUG Calling 'git fetch origin pull/431/head'
2024-10-27 00:35:38,301 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-27 00:35:38,302 [ scc.git] DEBUG * branch refs/pull/431/head -> FETCH_HEAD
2024-10-27 00:35:38,307 [ scc.git] DEBUG ## Unique users: []
2024-10-27 00:35:38,307 [ scc.git] DEBUG Get sha1 of %s
2024-10-27 00:35:38,307 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:35:38,312 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-27 00:35:38,324 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:35:38,328 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-27 00:35:38,589 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-10-27 00:35:38,589 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-10-27 00:35:38,590 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-27 00:35:38,596 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-10-27 00:35:38,597 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-10-27 00:35:38,597 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-10-27 00:35:38,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:35:38,733 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-27 00:35:38,745 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:35:38,750 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-27 00:35:39,075 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-27 00:35:39,075 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-10-27 00:35:39,076 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-27 00:35:39,084 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-10-27 00:35:39,084 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-10-27 00:35:39,084 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-10-27 00:35:39,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:35:39,212 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-27 00:35:39,225 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:35:39,230 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-27 00:35:39,267 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-10-27 00:35:39,268 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-27 00:35:39,272 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-10-27 00:35:39,272 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-10-27 00:35:39,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:35:39,594 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-27 00:35:39,607 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:35:39,613 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-27 00:35:39,840 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-10-27 00:35:39,840 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-10-27 00:35:39,841 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-27 00:35:39,845 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-10-27 00:35:39,845 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-10-27 00:35:39,845 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-10-27 00:35:39,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:35:39,980 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-27 00:35:39,993 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:35:39,998 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-27 00:35:40,043 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-27 00:35:40,046 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-10-27 00:35:40,046 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-10-27 00:35:40,046 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-10-27 00:35:40,046 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-10-27 00:35:40,046 [ scc.git] DEBUG create mode 100644 connect.py
2024-10-27 00:35:40,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:35:40,378 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-27 00:35:40,391 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:35:40,395 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-27 00:35:40,449 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-10-27 00:35:40,450 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-27 00:35:40,453 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-10-27 00:35:40,453 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-10-27 00:35:40,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:35:40,767 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-10-27 00:35:40,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:35:40,785 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-10-27 00:35:40,950 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-10-27 00:35:40,951 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-27 00:35:40,955 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-10-27 00:35:40,955 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-10-27 00:35:41,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:35:41,149 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-27 00:35:41,161 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:35:41,165 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-27 00:35:41,361 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-27 00:35:41,362 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-27 00:35:41,369 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-10-27 00:35:41,369 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-10-27 00:35:41,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:35:41,537 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-27 00:35:41,551 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:35:41,555 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-27 00:35:41,662 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-27 00:35:41,665 [ scc.git] DEBUG .gitignore | 1 +
2024-10-27 00:35:41,665 [ scc.git] DEBUG src/omero/plugins/download.py | 17 ++++++++++++-----
2024-10-27 00:35:41,665 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 5 deletions(-)
2024-10-27 00:35:41,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:35:41,921 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-27 00:35:41,933 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:35:41,937 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 431 (omero.HdfStorage.update: add size check on data.rowNumbers) 0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-27 00:35:42,010 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-27 00:35:42,013 [ scc.git] DEBUG src/omero/hdfstorageV2.py | 1 +
2024-10-27 00:35:42,014 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2024-10-27 00:35:42,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:35:42,313 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-27 00:35:42,354 [ scc.git] DEBUG Get sha1 of %s
2024-10-27 00:35:42,354 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:35:42,359 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-27 00:35:42,400 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-27 00:35:42,407 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fb4c4130ee0> has no local changes
2024-10-27 00:35:42,407 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Generated by OMERO-python-superbuild-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/215/)'
2024-10-27 00:35:42,418 [ scc.git] DEBUG [detached HEAD 0089115d] merge master -Dorg -Ssuccess-only
2024-10-27 00:35:42,418 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-27 00:35:42,418 [ scc.git] INFO Overriding base-branch from master to develop
2024-10-27 00:35:42,418 [ scc.repo] DEBUG ## PRs found:
2024-10-27 00:35:42,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-10-27 00:35:43,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-10-27 00:35:43,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2024-10-27 00:35:44,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-27 00:35:44,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-27 00:35:45,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-27 00:35:45,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-27 00:35:46,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-10-27 00:35:46,270 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-27 00:35:46,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-10-27 00:35:47,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-10-27 00:35:47,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-10-27 00:35:48,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-10-27 00:35:48,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-10-27 00:35:49,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-10-27 00:35:49,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-27 00:35:50,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-27 00:35:50,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-27 00:35:50,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-10-27 00:35:50,883 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-27 00:35:51,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-10-27 00:35:51,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-10-27 00:35:52,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-10-27 00:35:52,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-10-27 00:35:52,696 [ scc.repo] DEBUG ## Branches found:
2024-10-27 00:35:52,696 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-27 00:35:52,696 [ scc.git] DEBUG Get sha1 of %s
2024-10-27 00:35:52,696 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:35:52,702 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-10-27 00:35:52,708 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-27 00:35:52,708 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-10-27 00:35:52,714 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-10-27 00:35:52,719 [ scc.git] DEBUG Already up to date.
2024-10-27 00:35:52,720 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-10-27 00:35:53,119 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-27 00:35:53,120 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-10-27 00:35:53,125 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-10-27 00:35:53,500 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-27 00:35:53,501 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-10-27 00:35:53,510 [ scc.git] DEBUG ## Unique users: []
2024-10-27 00:35:53,510 [ scc.git] DEBUG Get sha1 of %s
2024-10-27 00:35:53,510 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:35:53,517 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-27 00:35:53,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:35:53,529 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-27 00:35:53,576 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-10-27 00:35:53,576 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-10-27 00:35:53,576 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-10-27 00:35:53,577 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-10-27 00:35:53,583 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-27 00:35:53,589 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-27 00:35:53,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:35:53,724 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-27 00:35:53,731 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-27 00:35:53,735 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#215](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/215/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/215/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-10-27 00:35:53,740 [ scc.config] DEBUG Found github.token
2024-10-27 00:35:53,740 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-10-27 00:35:53,740 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-27 00:35:53,745 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:35:53,749 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-27 00:35:53,784 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-27 00:35:53,787 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-10-27 00:35:53,787 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-10-27 00:35:54,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:35:54,103 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-27 00:35:54,143 [ scc.git] DEBUG Get sha1 of %s
2024-10-27 00:35:54,143 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:35:54,148 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-27 00:35:54,199 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-27 00:35:54,206 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fb4c411ebe0> has no local changes
2024-10-27 00:35:54,206 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/215/)'
2024-10-27 00:35:54,213 [ scc.git] DEBUG [detached HEAD 0c479fd] merge master -Dorg -Ssuccess-only
2024-10-27 00:35:54,214 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-27 00:35:54,214 [ scc.repo] DEBUG ## PRs found:
2024-10-27 00:35:54,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-10-27 00:35:55,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/589 HTTP/1.1" 200 None
2024-10-27 00:35:55,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/33cf0eb27577cdf0651aa994cfd52add56f49459 HTTP/1.1" 200 None
2024-10-27 00:35:56,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/33cf0eb27577cdf0651aa994cfd52add56f49459/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-27 00:35:56,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/33cf0eb27577cdf0651aa994cfd52add56f49459/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-27 00:35:57,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/33cf0eb27577cdf0651aa994cfd52add56f49459 HTTP/1.1" 200 None
2024-10-27 00:35:57,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/33cf0eb27577cdf0651aa994cfd52add56f49459?per_page=1 HTTP/1.1" 200 None
2024-10-27 00:35:57,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/33cf0eb27577cdf0651aa994cfd52add56f49459 HTTP/1.1" 200 None
2024-10-27 00:35:58,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/33cf0eb27577cdf0651aa994cfd52add56f49459/status HTTP/1.1" 200 None
2024-10-27 00:35:58,436 [ scc.repo] DEBUG - PR 589 knabar 'Remove Python 2 compatibility import'
2024-10-27 00:35:58,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/585 HTTP/1.1" 200 None
2024-10-27 00:35:59,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583 HTTP/1.1" 200 None
2024-10-27 00:35:59,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583/comments HTTP/1.1" 200 None
2024-10-27 00:36:00,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-27 00:36:00,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-27 00:36:01,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-27 00:36:01,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-27 00:36:02,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/aa50f469842b9687c74df8765d72241e6e37d32c?per_page=1 HTTP/1.1" 200 None
2024-10-27 00:36:02,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-27 00:36:03,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/status HTTP/1.1" 200 None
2024-10-27 00:36:03,142 [ scc.repo] DEBUG - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-27 00:36:03,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581 HTTP/1.1" 200 None
2024-10-27 00:36:04,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581/comments HTTP/1.1" 200 None
2024-10-27 00:36:04,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/580 HTTP/1.1" 200 None
2024-10-27 00:36:04,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-27 00:36:05,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-27 00:36:05,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-27 00:36:06,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-27 00:36:06,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc?per_page=1 HTTP/1.1" 200 None
2024-10-27 00:36:07,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-27 00:36:07,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/status HTTP/1.1" 200 None
2024-10-27 00:36:07,618 [ scc.repo] DEBUG - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-27 00:36:08,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-10-27 00:36:08,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-10-27 00:36:08,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-10-27 00:36:09,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-10-27 00:36:09,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-27 00:36:10,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-27 00:36:10,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-27 00:36:11,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-27 00:36:11,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-10-27 00:36:12,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-27 00:36:12,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-10-27 00:36:12,561 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-27 00:36:13,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-10-27 00:36:13,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-10-27 00:36:13,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-27 00:36:14,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-27 00:36:14,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-27 00:36:15,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-27 00:36:15,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-10-27 00:36:16,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-27 00:36:16,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-10-27 00:36:16,690 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-27 00:36:17,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-10-27 00:36:17,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-10-27 00:36:18,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-10-27 00:36:18,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-27 00:36:19,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-27 00:36:19,167 [ scc.repo] DEBUG ## Branches found:
2024-10-27 00:36:19,167 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-27 00:36:19,167 [ scc.git] DEBUG Get sha1 of %s
2024-10-27 00:36:19,167 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:36:19,172 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-27 00:36:19,178 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-27 00:36:19,178 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-27 00:36:19,253 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-27 00:36:19,259 [ scc.git] DEBUG Already up to date.
2024-10-27 00:36:19,260 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-10-27 00:36:20,954 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-27 00:36:20,954 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-10-27 00:36:20,959 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-10-27 00:36:21,292 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-27 00:36:21,292 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-10-27 00:36:21,297 [ scc.git] DEBUG Calling 'git fetch origin pull/580/head'
2024-10-27 00:36:21,775 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-27 00:36:21,775 [ scc.git] DEBUG * branch refs/pull/580/head -> FETCH_HEAD
2024-10-27 00:36:21,780 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head'
2024-10-27 00:36:22,157 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-27 00:36:22,157 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD
2024-10-27 00:36:22,162 [ scc.git] DEBUG Calling 'git fetch origin pull/589/head'
2024-10-27 00:36:22,672 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-27 00:36:22,672 [ scc.git] DEBUG * branch refs/pull/589/head -> FETCH_HEAD
2024-10-27 00:36:22,677 [ scc.git] DEBUG ## Unique users: []
2024-10-27 00:36:22,677 [ scc.git] DEBUG Get sha1 of %s
2024-10-27 00:36:22,677 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:36:22,682 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-27 00:36:22,690 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:36:22,694 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-27 00:36:23,266 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-10-27 00:36:23,266 [ scc.git] DEBUG Auto-merging setup.py
2024-10-27 00:36:23,267 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-27 00:36:23,271 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-10-27 00:36:23,271 [ scc.git] DEBUG setup.py | 1 +
2024-10-27 00:36:23,271 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-10-27 00:36:23,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:36:23,417 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-27 00:36:23,426 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:36:23,431 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-27 00:36:23,791 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-10-27 00:36:23,791 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-10-27 00:36:23,792 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-27 00:36:23,796 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-10-27 00:36:23,796 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-10-27 00:36:23,796 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-10-27 00:36:23,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:36:23,923 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-27 00:36:23,932 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:36:23,937 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 580 (omeroweb.webgateway.obj_id_bitmask: handle empty query results) 1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-27 00:36:24,246 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-27 00:36:24,251 [ scc.git] DEBUG omeroweb/webgateway/views.py | 6 ++++++
2024-10-27 00:36:24,251 [ scc.git] DEBUG 1 file changed, 6 insertions(+)
2024-10-27 00:36:24,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:36:24,383 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-27 00:36:24,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:36:24,398 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Allow users to click a group name to show data from all users in that group) aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-27 00:36:24,668 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-27 00:36:24,672 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_content.html | 6 +++++-
2024-10-27 00:36:24,672 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_dropdown2.html | 2 --
2024-10-27 00:36:24,672 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 3 deletions(-)
2024-10-27 00:36:24,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:36:24,809 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...33cf0eb27577cdf0651aa994cfd52add56f49459'
2024-10-27 00:36:24,818 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:36:24,823 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 589 (Remove Python 2 compatibility import) 33cf0eb27577cdf0651aa994cfd52add56f49459'
2024-10-27 00:36:24,899 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-27 00:36:24,902 [ scc.git] DEBUG omeroweb/urls.py | 4 ++--
2024-10-27 00:36:24,902 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-)
2024-10-27 00:36:25,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:36:25,186 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-27 00:36:25,226 [ scc.git] DEBUG Get sha1 of %s
2024-10-27 00:36:25,226 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-27 00:36:25,231 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-27 00:36:25,269 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-27 00:36:25,279 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fb4c4085fa0> has no local changes
2024-10-27 00:36:25,279 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
- PR 589 knabar 'Remove Python 2 compatibility import'
Generated by OMERO-python-superbuild-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/215/)'
2024-10-27 00:36:25,290 [ scc.git] DEBUG [detached HEAD b04317bd6] merge master -Dorg -Ssuccess-only
2024-10-27 00:36:25,290 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-27 00:36:25,290 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-27 00:36:25,337 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-10-27 00:36:25,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:36:25,605 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-10-27 00:36:25,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:36:26,006 [ scc.config] DEBUG Found submodule.omero-py.url
2024-10-27 00:36:26,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:36:26,387 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-10-27 00:36:26,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:36:26,773 [ scc.config] DEBUG Found submodule.omero-web.url
2024-10-27 00:36:27,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-27 00:36:27,156 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-27 00:36:27,182 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fb4c4eaf8b0> has local changes
2024-10-27 00:36:27,182 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
- PR 589 knabar 'Remove Python 2 compatibility import'
Generated by OMERO-python-superbuild-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/215/)'
2024-10-27 00:36:27,192 [ scc.git] DEBUG [detached HEAD 91ae4ff] merge master -Dorg -Ssuccess-only
2024-10-27 00:36:27,192 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-27 00:36:27,192 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-10-27 00:36:27,192 [ scc.merge] INFO Already up to date.
2024-10-27 00:36:27,193 [ scc.merge] INFO
2024-10-27 00:36:27,193 [ scc.merge] INFO Merged PRs:
2024-10-27 00:36:27,193 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-27 00:36:27,193 [ scc.merge] INFO
2024-10-27 00:36:27,193 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-10-27 00:36:27,193 [ scc.merge] INFO Already up to date.
2024-10-27 00:36:27,193 [ scc.merge] INFO
2024-10-27 00:36:27,193 [ scc.merge] INFO Merged PRs:
2024-10-27 00:36:27,193 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-27 00:36:27,193 [ scc.merge] INFO
2024-10-27 00:36:27,193 [ scc.merge] INFO Repository: ome/omero-marshal
2024-10-27 00:36:27,193 [ scc.merge] INFO Excluded PRs:
2024-10-27 00:36:27,193 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-10-27 00:36:27,193 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-10-27 00:36:27,193 [ scc.merge] INFO Already up to date.
2024-10-27 00:36:27,193 [ scc.merge] INFO
2024-10-27 00:36:27,193 [ scc.merge] INFO Merged PRs:
2024-10-27 00:36:27,193 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-27 00:36:27,193 [ scc.merge] INFO
2024-10-27 00:36:27,193 [ scc.merge] INFO Repository: ome/omero-py
2024-10-27 00:36:27,193 [ scc.merge] INFO Excluded PRs:
2024-10-27 00:36:27,193 [ scc.merge] INFO - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
2024-10-27 00:36:27,193 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-10-27 00:36:27,193 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-10-27 00:36:27,193 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-10-27 00:36:27,193 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-10-27 00:36:27,193 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-10-27 00:36:27,193 [ scc.merge] INFO Already up to date.
2024-10-27 00:36:27,193 [ scc.merge] INFO
2024-10-27 00:36:27,193 [ scc.merge] INFO Merged PRs:
2024-10-27 00:36:27,193 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-10-27 00:36:27,193 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-27 00:36:27,193 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-27 00:36:27,194 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-27 00:36:27,194 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-10-27 00:36:27,194 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-27 00:36:27,194 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-10-27 00:36:27,194 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-10-27 00:36:27,194 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation'
2024-10-27 00:36:27,194 [ scc.merge] INFO - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-27 00:36:27,194 [ scc.merge] INFO
2024-10-27 00:36:27,194 [ scc.merge] INFO Repository: ome/omero-scripts
2024-10-27 00:36:27,194 [ scc.merge] INFO Excluded PRs:
2024-10-27 00:36:27,194 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-10-27 00:36:27,194 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-10-27 00:36:27,194 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-10-27 00:36:27,194 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-10-27 00:36:27,194 [ scc.merge] INFO Already up to date.
2024-10-27 00:36:27,194 [ scc.merge] INFO
2024-10-27 00:36:27,194 [ scc.merge] INFO Merged PRs:
2024-10-27 00:36:27,194 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-27 00:36:27,194 [ scc.merge] INFO
2024-10-27 00:36:27,194 [ scc.merge] INFO Conflicting PRs (not included):
2024-10-27 00:36:27,194 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-27 00:36:27,194 [ scc.merge] INFO
2024-10-27 00:36:27,194 [ scc.merge] INFO Repository: ome/omero-web
2024-10-27 00:36:27,194 [ scc.merge] INFO Excluded PRs:
2024-10-27 00:36:27,194 [ scc.merge] INFO - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-10-27 00:36:27,194 [ scc.merge] INFO - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
2024-10-27 00:36:27,194 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-10-27 00:36:27,194 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-10-27 00:36:27,194 [ scc.merge] INFO Already up to date.
2024-10-27 00:36:27,194 [ scc.merge] INFO
2024-10-27 00:36:27,194 [ scc.merge] INFO Merged PRs:
2024-10-27 00:36:27,194 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-27 00:36:27,194 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-27 00:36:27,194 [ scc.merge] INFO - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-27 00:36:27,194 [ scc.merge] INFO - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-27 00:36:27,194 [ scc.merge] INFO - PR 589 knabar 'Remove Python 2 compatibility import'
2024-10-27 00:36:27,194 [ scc.merge] INFO
2024-10-27 00:36:27,195 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-27 00:36:27,195 [ scc.git] DEBUG Calling 'git remote'
2024-10-27 00:36:27,199 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-27 00:36:27,199 [ scc.git] DEBUG Calling 'git remote'
2024-10-27 00:36:27,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-27 00:36:27,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-27 00:36:27,203 [ scc.git] DEBUG Calling 'git remote'
2024-10-27 00:36:27,206 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-27 00:36:27,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-27 00:36:27,207 [ scc.git] DEBUG Calling 'git remote'
2024-10-27 00:36:27,210 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-27 00:36:27,210 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-27 00:36:27,210 [ scc.git] DEBUG Calling 'git remote'
2024-10-27 00:36:27,214 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-27 00:36:27,214 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-27 00:36:27,214 [ scc.git] DEBUG Calling 'git remote'
2024-10-27 00:36:27,218 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 4fd72efa
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from da5b7d11f
nothing to commit, working tree clean
HEAD detached from e849d72
nothing to commit, working tree clean
2024-10-27 00:36:54,380 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
![[Jenkins]](/jenkins/static/f6f303f9/images/svgs/logo.svg){kind=logo}
